HEADER TRANSFERASE/TRANSFERASE INHIBITOR 06-MAY-15 4ZOF TITLE LOBENZARIT-LIKE INHIBITOR BOUND IN THE ACTIVE SITE OF MYCOBACTERIUM TITLE 2 TUBERCULOSIS ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE (ANPRT; TRPD) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.4.2.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RA; SOURCE 3 ORGANISM_TAXID: 419947; SOURCE 4 STRAIN: ATCC 25177 / H37RA; SOURCE 5 GENE: TRPD, MRA_2208; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PGROESL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23A KEYWDS INHIBITOR, COMPLEX, LOBENZARIT-LIKE ANALOGUE, TB STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, TBSGC, PHOSPHORIBOSYLTRANSFERASE, MAGNESIUM BINDING, KEYWDS 3 PHOSPHORIBOSYLPYROPHOSPHATE, PRPP, TRANSFERASE-TRANSFERASE INHIBITOR KEYWDS 4 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.L.EVANS,E.N.BAKER,J.S.LOTT,TB STRUCTURAL GENOMICS CONSORTIUM AUTHOR 2 (TBSGC) REVDAT 6 27-SEP-23 4ZOF 1 HETSYN REVDAT 5 29-JUL-20 4ZOF 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE REVDAT 4 01-JAN-20 4ZOF 1 REMARK REVDAT 3 17-JUL-19 4ZOF 1 REMARK REVDAT 2 22-NOV-17 4ZOF 1 REMARK REVDAT 1 11-MAY-16 4ZOF 0 JRNL AUTH G.L.EVANS,E.N.BAKER,J.S.LOTT JRNL TITL INHIBITOR BOUND IN THE ACTIVE SITE OF MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE (ANPRT; JRNL TITL 3 TRPD). JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 63643 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 3083 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.8158 - 4.5329 1.00 3878 215 0.1619 0.1716 REMARK 3 2 4.5329 - 3.5990 1.00 3802 178 0.1595 0.1875 REMARK 3 3 3.5990 - 3.1443 1.00 3832 192 0.1889 0.2161 REMARK 3 4 3.1443 - 2.8570 1.00 3791 187 0.1947 0.2402 REMARK 3 5 2.8570 - 2.6523 1.00 3771 192 0.1861 0.2126 REMARK 3 6 2.6523 - 2.4959 1.00 3794 192 0.1729 0.2090 REMARK 3 7 2.4959 - 2.3710 1.00 3777 189 0.1784 0.2285 REMARK 3 8 2.3710 - 2.2678 1.00 3751 204 0.1781 0.2133 REMARK 3 9 2.2678 - 2.1805 1.00 3781 212 0.1823 0.2299 REMARK 3 10 2.1805 - 2.1053 1.00 3769 183 0.1940 0.2683 REMARK 3 11 2.1053 - 2.0394 1.00 3746 201 0.1944 0.2464 REMARK 3 12 2.0394 - 1.9811 1.00 3755 196 0.2023 0.2600 REMARK 3 13 1.9811 - 1.9290 1.00 3802 180 0.2080 0.2561 REMARK 3 14 1.9290 - 1.8819 1.00 3785 191 0.2245 0.2834 REMARK 3 15 1.8819 - 1.8391 1.00 3763 184 0.2453 0.2794 REMARK 3 16 1.8391 - 1.8000 1.00 3763 187 0.2721 0.2892 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 5193 REMARK 3 ANGLE : 1.098 7093 REMARK 3 CHIRALITY : 0.041 822 REMARK 3 PLANARITY : 0.005 939 REMARK 3 DIHEDRAL : 12.246 1786 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZOF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209472. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS, AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63649 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.17900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: PDB ENTRY 3QR9 CHAIN A REMARK 200 REMARK 200 REMARK: FLAT DIAMOND SHAPE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M IMIDAZOLE-MALATE, 15% PEG4000, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.09550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.38150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.09550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.38150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 GLY A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 ARG A 13 REMARK 465 GLY A 14 REMARK 465 GLY A 15 REMARK 465 SER A 16 REMARK 465 PRO A 17 REMARK 465 LYS A 18 REMARK 465 ALA A 19 REMARK 465 GLU A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 SER A 23 REMARK 465 VAL A 24 REMARK 465 SER A 332 REMARK 465 ARG A 333 REMARK 465 ALA A 334 REMARK 465 ILE A 370 REMARK 465 LEU A 371 REMARK 465 GLU A 372 REMARK 465 HIS A 373 REMARK 465 HIS A 374 REMARK 465 HIS A 375 REMARK 465 HIS A 376 REMARK 465 HIS A 377 REMARK 465 HIS A 378 REMARK 465 MET B 0 REMARK 465 VAL B 1 REMARK 465 ALA B 2 REMARK 465 LEU B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 GLU B 6 REMARK 465 GLY B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 465 SER B 12 REMARK 465 ARG B 13 REMARK 465 GLY B 14 REMARK 465 GLY B 15 REMARK 465 SER B 16 REMARK 465 PRO B 17 REMARK 465 LYS B 18 REMARK 465 ALA B 19 REMARK 465 GLU B 20 REMARK 465 ALA B 21 REMARK 465 ALA B 22 REMARK 465 SER B 23 REMARK 465 VAL B 24 REMARK 465 SER B 332 REMARK 465 ARG B 333 REMARK 465 ALA B 334 REMARK 465 ILE B 370 REMARK 465 LEU B 371 REMARK 465 GLU B 372 REMARK 465 HIS B 373 REMARK 465 HIS B 374 REMARK 465 HIS B 375 REMARK 465 HIS B 376 REMARK 465 HIS B 377 REMARK 465 HIS B 378 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 96 CG OD1 OD2 REMARK 470 ASP A 100 CG OD1 OD2 REMARK 470 ARG A 157 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 194 CG CD NE CZ NH1 NH2 REMARK 470 SER A 331 OG REMARK 470 GLU A 335 CG CD OE1 OE2 REMARK 470 LEU A 337 CG CD1 CD2 REMARK 470 GLU A 342 CG CD OE1 OE2 REMARK 470 ARG A 365 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 368 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 369 CG CD OE1 NE2 REMARK 470 ASP B 96 CG OD1 OD2 REMARK 470 ASN B 114 CG OD1 ND2 REMARK 470 ARG B 157 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 225 CG OD1 OD2 REMARK 470 ASP B 287 CG OD1 OD2 REMARK 470 GLU B 335 CG CD OE1 OE2 REMARK 470 GLU B 341 CG CD OE1 OE2 REMARK 470 GLU B 342 CG CD OE1 OE2 REMARK 470 ARG B 365 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 369 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 73 103.58 90.62 REMARK 500 ASP A 251 46.57 -88.59 REMARK 500 THR A 257 -166.96 -170.36 REMARK 500 ALA B 73 102.68 95.75 REMARK 500 ASN B 114 75.17 58.86 REMARK 500 ASP B 251 48.22 -88.15 REMARK 500 THR B 257 -162.00 -172.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 714 DISTANCE = 5.92 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 400 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 119 OG REMARK 620 2 GLU A 252 OE1 110.3 REMARK 620 3 PRP A 402 O1A 88.9 160.4 REMARK 620 4 PRP A 402 O3B 87.1 88.6 88.4 REMARK 620 5 HOH A 550 O 79.5 87.8 100.0 163.9 REMARK 620 6 HOH A 569 O 173.3 76.4 84.4 92.4 102.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 251 OD1 REMARK 620 2 GLU A 252 OE1 92.9 REMARK 620 3 HOH A 568 O 87.3 109.5 REMARK 620 4 HOH A 569 O 88.5 80.2 169.6 REMARK 620 5 HOH A 580 O 177.1 85.7 90.8 93.7 REMARK 620 6 HOH A 668 O 92.5 163.6 86.3 84.4 89.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 400 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 119 OG REMARK 620 2 GLU B 252 OE2 111.0 REMARK 620 3 PRP B 402 O2A 86.7 159.9 REMARK 620 4 PRP B 402 O3B 88.0 86.1 85.2 REMARK 620 5 HOH B 527 O 174.3 74.1 87.8 89.9 REMARK 620 6 HOH B 543 O 81.2 89.1 103.4 165.7 101.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 251 OD1 REMARK 620 2 GLU B 252 OE2 95.2 REMARK 620 3 HOH B 527 O 90.5 75.5 REMARK 620 4 HOH B 534 O 86.9 112.3 172.0 REMARK 620 5 HOH B 546 O 171.1 79.3 94.9 88.7 REMARK 620 6 HOH B 650 O 91.9 159.7 85.4 87.1 95.6 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GIU RELATED DB: PDB REMARK 900 ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE IN COMPLEX WITH AN INHIBITOR REMARK 900 WITH THE SAME SCAFFOLD REMARK 900 RELATED ID: 3QR9 RELATED DB: PDB REMARK 900 ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE WITHOUT LIGAND REMARK 900 RELATED ID: 4ZOJ RELATED DB: PDB REMARK 900 ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE WITH RELATED INHIBITOR BOUND REMARK 900 AT ACTIVE SITE REMARK 900 RELATED ID: 4ZOK RELATED DB: PDB REMARK 900 ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE WITH RELATED INHIBITOR BOUND REMARK 900 AT SUBSTRATE CAPTURE SITE DBREF 4ZOF A 2 370 UNP A5U4M0 TRPD_MYCTA 2 370 DBREF 4ZOF B 2 370 UNP A5U4M0 TRPD_MYCTA 2 370 SEQADV 4ZOF MET A 0 UNP A5U4M0 INITIATING METHIONINE SEQADV 4ZOF VAL A 1 UNP A5U4M0 CLONING ARTIFACT SEQADV 4ZOF LEU A 371 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF GLU A 372 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS A 373 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS A 374 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS A 375 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS A 376 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS A 377 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS A 378 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF MET B 0 UNP A5U4M0 INITIATING METHIONINE SEQADV 4ZOF VAL B 1 UNP A5U4M0 CLONING ARTIFACT SEQADV 4ZOF LEU B 371 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF GLU B 372 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS B 373 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS B 374 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS B 375 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS B 376 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS B 377 UNP A5U4M0 EXPRESSION TAG SEQADV 4ZOF HIS B 378 UNP A5U4M0 EXPRESSION TAG SEQRES 1 A 379 MET VAL ALA LEU SER ALA GLU GLY SER SER GLY GLY SER SEQRES 2 A 379 ARG GLY GLY SER PRO LYS ALA GLU ALA ALA SER VAL PRO SEQRES 3 A 379 SER TRP PRO GLN ILE LEU GLY ARG LEU THR ASP ASN ARG SEQRES 4 A 379 ASP LEU ALA ARG GLY GLN ALA ALA TRP ALA MET ASP GLN SEQRES 5 A 379 ILE MET THR GLY ASN ALA ARG PRO ALA GLN ILE ALA ALA SEQRES 6 A 379 PHE ALA VAL ALA MET THR MET LYS ALA PRO THR ALA ASP SEQRES 7 A 379 GLU VAL GLY GLU LEU ALA GLY VAL MET LEU SER HIS ALA SEQRES 8 A 379 HIS PRO LEU PRO ALA ASP THR VAL PRO ASP ASP ALA VAL SEQRES 9 A 379 ASP VAL VAL GLY THR GLY GLY ASP GLY VAL ASN THR VAL SEQRES 10 A 379 ASN LEU SER THR MET ALA ALA ILE VAL VAL ALA ALA ALA SEQRES 11 A 379 GLY VAL PRO VAL VAL LYS HIS GLY ASN ARG ALA ALA SER SEQRES 12 A 379 SER LEU SER GLY GLY ALA ASP THR LEU GLU ALA LEU GLY SEQRES 13 A 379 VAL ARG ILE ASP LEU GLY PRO ASP LEU VAL ALA ARG SER SEQRES 14 A 379 LEU ALA GLU VAL GLY ILE GLY PHE CYS PHE ALA PRO ARG SEQRES 15 A 379 PHE HIS PRO SER TYR ARG HIS ALA ALA ALA VAL ARG ARG SEQRES 16 A 379 GLU ILE GLY VAL PRO THR VAL PHE ASN LEU LEU GLY PRO SEQRES 17 A 379 LEU THR ASN PRO ALA ARG PRO ARG ALA GLY LEU ILE GLY SEQRES 18 A 379 CYS ALA PHE ALA ASP LEU ALA GLU VAL MET ALA GLY VAL SEQRES 19 A 379 PHE ALA ALA ARG ARG SER SER VAL LEU VAL VAL HIS GLY SEQRES 20 A 379 ASP ASP GLY LEU ASP GLU LEU THR THR THR THR THR SER SEQRES 21 A 379 THR ILE TRP ARG VAL ALA ALA GLY SER VAL ASP LYS LEU SEQRES 22 A 379 THR PHE ASP PRO ALA GLY PHE GLY PHE ALA ARG ALA GLN SEQRES 23 A 379 LEU ASP GLN LEU ALA GLY GLY ASP ALA GLN ALA ASN ALA SEQRES 24 A 379 ALA ALA VAL ARG ALA VAL LEU GLY GLY ALA ARG GLY PRO SEQRES 25 A 379 VAL ARG ASP ALA VAL VAL LEU ASN ALA ALA GLY ALA ILE SEQRES 26 A 379 VAL ALA HIS ALA GLY LEU SER SER ARG ALA GLU TRP LEU SEQRES 27 A 379 PRO ALA TRP GLU GLU GLY LEU ARG ARG ALA SER ALA ALA SEQRES 28 A 379 ILE ASP THR GLY ALA ALA GLU GLN LEU LEU ALA ARG TRP SEQRES 29 A 379 VAL ARG PHE GLY ARG GLN ILE LEU GLU HIS HIS HIS HIS SEQRES 30 A 379 HIS HIS SEQRES 1 B 379 MET VAL ALA LEU SER ALA GLU GLY SER SER GLY GLY SER SEQRES 2 B 379 ARG GLY GLY SER PRO LYS ALA GLU ALA ALA SER VAL PRO SEQRES 3 B 379 SER TRP PRO GLN ILE LEU GLY ARG LEU THR ASP ASN ARG SEQRES 4 B 379 ASP LEU ALA ARG GLY GLN ALA ALA TRP ALA MET ASP GLN SEQRES 5 B 379 ILE MET THR GLY ASN ALA ARG PRO ALA GLN ILE ALA ALA SEQRES 6 B 379 PHE ALA VAL ALA MET THR MET LYS ALA PRO THR ALA ASP SEQRES 7 B 379 GLU VAL GLY GLU LEU ALA GLY VAL MET LEU SER HIS ALA SEQRES 8 B 379 HIS PRO LEU PRO ALA ASP THR VAL PRO ASP ASP ALA VAL SEQRES 9 B 379 ASP VAL VAL GLY THR GLY GLY ASP GLY VAL ASN THR VAL SEQRES 10 B 379 ASN LEU SER THR MET ALA ALA ILE VAL VAL ALA ALA ALA SEQRES 11 B 379 GLY VAL PRO VAL VAL LYS HIS GLY ASN ARG ALA ALA SER SEQRES 12 B 379 SER LEU SER GLY GLY ALA ASP THR LEU GLU ALA LEU GLY SEQRES 13 B 379 VAL ARG ILE ASP LEU GLY PRO ASP LEU VAL ALA ARG SER SEQRES 14 B 379 LEU ALA GLU VAL GLY ILE GLY PHE CYS PHE ALA PRO ARG SEQRES 15 B 379 PHE HIS PRO SER TYR ARG HIS ALA ALA ALA VAL ARG ARG SEQRES 16 B 379 GLU ILE GLY VAL PRO THR VAL PHE ASN LEU LEU GLY PRO SEQRES 17 B 379 LEU THR ASN PRO ALA ARG PRO ARG ALA GLY LEU ILE GLY SEQRES 18 B 379 CYS ALA PHE ALA ASP LEU ALA GLU VAL MET ALA GLY VAL SEQRES 19 B 379 PHE ALA ALA ARG ARG SER SER VAL LEU VAL VAL HIS GLY SEQRES 20 B 379 ASP ASP GLY LEU ASP GLU LEU THR THR THR THR THR SER SEQRES 21 B 379 THR ILE TRP ARG VAL ALA ALA GLY SER VAL ASP LYS LEU SEQRES 22 B 379 THR PHE ASP PRO ALA GLY PHE GLY PHE ALA ARG ALA GLN SEQRES 23 B 379 LEU ASP GLN LEU ALA GLY GLY ASP ALA GLN ALA ASN ALA SEQRES 24 B 379 ALA ALA VAL ARG ALA VAL LEU GLY GLY ALA ARG GLY PRO SEQRES 25 B 379 VAL ARG ASP ALA VAL VAL LEU ASN ALA ALA GLY ALA ILE SEQRES 26 B 379 VAL ALA HIS ALA GLY LEU SER SER ARG ALA GLU TRP LEU SEQRES 27 B 379 PRO ALA TRP GLU GLU GLY LEU ARG ARG ALA SER ALA ALA SEQRES 28 B 379 ILE ASP THR GLY ALA ALA GLU GLN LEU LEU ALA ARG TRP SEQRES 29 B 379 VAL ARG PHE GLY ARG GLN ILE LEU GLU HIS HIS HIS HIS SEQRES 30 B 379 HIS HIS HET MG A 400 1 HET MG A 401 1 HET PRP A 402 22 HET 59L A 403 23 HET IMD A 404 5 HET MG B 400 1 HET MG B 401 1 HET PRP B 402 22 HET 59L B 403 23 HET PO4 B 404 5 HETNAM MG MAGNESIUM ION HETNAM PRP 1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE HETNAM 59L 2-[(2-CARBOXY-5-NITROPHENYL)AMINO]-3-METHYLBENZOIC ACID HETNAM IMD IMIDAZOLE HETNAM PO4 PHOSPHATE ION HETSYN PRP ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID; 1-O- HETSYN 2 PRP PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RIBOSE; 1-O- HETSYN 3 PRP PYROPHOSPHONO-5-O-PHOSPHONO-D-RIBOSE; 1-O- HETSYN 4 PRP PYROPHOSPHONO-5-O-PHOSPHONO-RIBOSE FORMUL 3 MG 4(MG 2+) FORMUL 5 PRP 2(C5 H13 O14 P3) FORMUL 6 59L 2(C15 H12 N2 O6) FORMUL 7 IMD C3 H5 N2 1+ FORMUL 12 PO4 O4 P 3- FORMUL 13 HOH *403(H2 O) HELIX 1 AA1 SER A 26 ASP A 36 1 11 HELIX 2 AA2 GLY A 43 THR A 54 1 12 HELIX 3 AA3 ARG A 58 ALA A 73 1 16 HELIX 4 AA4 THR A 75 ALA A 90 1 16 HELIX 5 AA5 ASN A 117 ALA A 129 1 13 HELIX 6 AA6 GLY A 146 GLY A 155 1 10 HELIX 7 AA7 GLY A 161 GLY A 173 1 13 HELIX 8 AA8 ALA A 179 HIS A 183 1 5 HELIX 9 AA9 TYR A 186 GLY A 197 1 12 HELIX 10 AB1 THR A 200 THR A 209 5 10 HELIX 11 AB2 LEU A 226 ARG A 237 1 12 HELIX 12 AB3 ASP A 275 GLY A 280 5 6 HELIX 13 AB4 GLN A 285 ALA A 290 5 6 HELIX 14 AB5 ASP A 293 GLY A 306 1 14 HELIX 15 AB6 GLY A 310 GLY A 329 1 20 HELIX 16 AB7 TRP A 336 THR A 353 1 18 HELIX 17 AB8 GLY A 354 GLN A 369 1 16 HELIX 18 AB9 SER B 26 ASP B 36 1 11 HELIX 19 AC1 GLY B 43 THR B 54 1 12 HELIX 20 AC2 ARG B 58 ALA B 73 1 16 HELIX 21 AC3 THR B 75 ALA B 90 1 16 HELIX 22 AC4 ASN B 117 ALA B 129 1 13 HELIX 23 AC5 GLY B 146 GLY B 155 1 10 HELIX 24 AC6 GLY B 161 VAL B 172 1 12 HELIX 25 AC7 ALA B 179 HIS B 183 1 5 HELIX 26 AC8 TYR B 186 GLY B 197 1 12 HELIX 27 AC9 THR B 200 LEU B 205 5 6 HELIX 28 AD1 LEU B 226 ARG B 237 1 12 HELIX 29 AD2 ASP B 275 GLY B 280 5 6 HELIX 30 AD3 GLN B 285 ALA B 290 5 6 HELIX 31 AD4 ASP B 293 GLY B 306 1 14 HELIX 32 AD5 GLY B 310 GLY B 329 1 20 HELIX 33 AD6 TRP B 336 THR B 353 1 18 HELIX 34 AD7 GLY B 354 GLN B 369 1 16 SHEET 1 AA1 5 VAL A 103 GLY A 107 0 SHEET 2 AA1 5 ALA A 216 GLY A 220 1 O GLY A 220 N VAL A 106 SHEET 3 AA1 5 SER A 240 GLY A 246 1 O VAL A 244 N ILE A 219 SHEET 4 AA1 5 SER A 259 ALA A 265 -1 O VAL A 264 N VAL A 241 SHEET 5 AA1 5 SER A 268 PHE A 274 -1 O ASP A 270 N ARG A 263 SHEET 1 AA2 2 VAL A 133 GLY A 137 0 SHEET 2 AA2 2 ILE A 174 PHE A 178 1 O CYS A 177 N LYS A 135 SHEET 1 AA3 5 VAL B 103 GLY B 107 0 SHEET 2 AA3 5 ALA B 216 GLY B 220 1 O LEU B 218 N ASP B 104 SHEET 3 AA3 5 SER B 240 GLY B 246 1 O LEU B 242 N ILE B 219 SHEET 4 AA3 5 SER B 259 ALA B 265 -1 O VAL B 264 N VAL B 241 SHEET 5 AA3 5 SER B 268 PHE B 274 -1 O LEU B 272 N ILE B 261 SHEET 1 AA4 2 VAL B 133 GLY B 137 0 SHEET 2 AA4 2 ILE B 174 PHE B 178 1 O CYS B 177 N LYS B 135 LINK OG SER A 119 MG MG A 400 1555 1555 2.18 LINK OD1 ASP A 251 MG MG A 401 1555 1555 2.18 LINK OE1 GLU A 252 MG MG A 400 1555 1555 2.14 LINK OE1 GLU A 252 MG MG A 401 1555 1555 2.07 LINK MG MG A 400 O1A PRP A 402 1555 1555 2.15 LINK MG MG A 400 O3B PRP A 402 1555 1555 2.27 LINK MG MG A 400 O HOH A 550 1555 1555 2.13 LINK MG MG A 400 O HOH A 569 1555 1555 2.24 LINK MG MG A 401 O HOH A 568 1555 1555 2.05 LINK MG MG A 401 O HOH A 569 1555 1555 2.14 LINK MG MG A 401 O HOH A 580 1555 1555 2.13 LINK MG MG A 401 O HOH A 668 1555 1555 2.08 LINK OG SER B 119 MG MG B 400 1555 1555 2.18 LINK OD1 ASP B 251 MG MG B 401 1555 1555 2.19 LINK OE2 GLU B 252 MG MG B 400 1555 1555 2.16 LINK OE2 GLU B 252 MG MG B 401 1555 1555 2.12 LINK MG MG B 400 O2A PRP B 402 1555 1555 2.15 LINK MG MG B 400 O3B PRP B 402 1555 1555 2.18 LINK MG MG B 400 O HOH B 527 1555 1555 2.18 LINK MG MG B 400 O HOH B 543 1555 1555 2.12 LINK MG MG B 401 O HOH B 527 1555 1555 2.15 LINK MG MG B 401 O HOH B 534 1555 1555 2.10 LINK MG MG B 401 O HOH B 546 1555 1555 2.07 LINK MG MG B 401 O HOH B 650 1555 1555 2.08 CRYST1 94.191 78.763 99.674 90.00 109.45 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010617 0.000000 0.003749 0.00000 SCALE2 0.000000 0.012696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010640 0.00000