HEADER CELL ADHESION 08-MAY-15 4ZPS TITLE CRYSTAL STRUCTURE OF PROTOCADHERIN GAMMA A8 EC1-3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MCG133388, ISOFORM CRA_M; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 30-342; COMPND 5 SYNONYM: PROTEIN PCDHGA8,PROTOCADHERIN GAMMA A8,PROTOCADHERIN GAMMA COMPND 6 SUBFAMILY A,8; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PCDHGA8, MCG_133388; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR K.M.GOODMAN,S.MANNEPALLI,L.SHAPIRO REVDAT 4 06-NOV-24 4ZPS 1 HETSYN REVDAT 3 29-JUL-20 4ZPS 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 04-NOV-15 4ZPS 1 JRNL REVDAT 1 28-OCT-15 4ZPS 0 JRNL AUTH R.RUBINSTEIN,C.A.THU,K.M.GOODMAN,H.N.WOLCOTT,F.BAHNA, JRNL AUTH 2 S.MANNEPALLI,G.AHLSEN,M.CHEVEE,A.HALIM,H.CLAUSEN,T.MANIATIS, JRNL AUTH 3 L.SHAPIRO,B.HONIG JRNL TITL MOLECULAR LOGIC OF NEURONAL SELF-RECOGNITION THROUGH JRNL TITL 2 PROTOCADHERIN DOMAIN INTERACTIONS. JRNL REF CELL V. 163 629 2015 JRNL REFN ISSN 1097-4172 JRNL PMID 26478182 JRNL DOI 10.1016/J.CELL.2015.09.026 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 9489 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.266 REMARK 3 R VALUE (WORKING SET) : 0.264 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 474 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6554 - 4.1817 0.98 3088 170 0.2395 0.2595 REMARK 3 2 4.1817 - 3.3195 1.00 3033 158 0.2723 0.2900 REMARK 3 3 3.3195 - 2.9000 0.97 2894 146 0.3153 0.3563 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2430 REMARK 3 ANGLE : 0.610 3307 REMARK 3 CHIRALITY : 0.024 394 REMARK 3 PLANARITY : 0.003 439 REMARK 3 DIHEDRAL : 11.252 912 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND ((RESSEQ 1:96)) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3141 -16.1090 -21.4789 REMARK 3 T TENSOR REMARK 3 T11: 0.9505 T22: 1.0042 REMARK 3 T33: 0.4546 T12: 0.1401 REMARK 3 T13: -0.1383 T23: -0.0730 REMARK 3 L TENSOR REMARK 3 L11: 2.7265 L22: 3.2186 REMARK 3 L33: 1.5341 L12: -0.2678 REMARK 3 L13: -0.5325 L23: 1.1836 REMARK 3 S TENSOR REMARK 3 S11: -0.1958 S12: -0.3104 S13: 0.1051 REMARK 3 S21: 0.7245 S22: 0.7336 S23: -0.0525 REMARK 3 S31: 0.5204 S32: 0.4885 S33: -0.5829 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND ((RESSEQ 97:205)) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0811 -7.5960 20.5055 REMARK 3 T TENSOR REMARK 3 T11: 1.2606 T22: 0.4744 REMARK 3 T33: 0.3298 T12: 0.2849 REMARK 3 T13: -0.2445 T23: -0.0598 REMARK 3 L TENSOR REMARK 3 L11: 2.3753 L22: 2.5247 REMARK 3 L33: 4.6005 L12: -0.6813 REMARK 3 L13: -0.2333 L23: 0.0276 REMARK 3 S TENSOR REMARK 3 S11: 0.8143 S12: 0.5500 S13: -0.0769 REMARK 3 S21: -1.6738 S22: -0.4594 S23: 0.4844 REMARK 3 S31: -0.1178 S32: -0.2691 S33: -0.1640 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND ((RESSEQ 206:313)) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7787 -11.4995 70.4944 REMARK 3 T TENSOR REMARK 3 T11: 0.1668 T22: 0.3524 REMARK 3 T33: 0.3055 T12: -0.0941 REMARK 3 T13: -0.0031 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 1.0736 L22: 2.7386 REMARK 3 L33: 8.1552 L12: -0.4031 REMARK 3 L13: -0.5143 L23: 0.1916 REMARK 3 S TENSOR REMARK 3 S11: -0.2258 S12: -0.2096 S13: 0.0389 REMARK 3 S21: -0.0012 S22: 0.1440 S23: 0.0416 REMARK 3 S31: 0.0315 S32: 0.2036 S33: 0.1027 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZPS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209676. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9489 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG400, 100MM TRIS-CL, PH 8.7, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.03000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.86500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.06000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.86500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.03000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.06000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.03000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.06000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 83.86500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.06000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.03000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 83.86500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 314 REMARK 465 HIS A 315 REMARK 465 HIS A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 9 CG CD OE1 OE2 REMARK 470 ASP A 11 CG OD1 OD2 REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 GLU A 29 CG CD OE1 OE2 REMARK 470 SER A 39 OG REMARK 470 ARG A 40 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 42 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 44 CG CD OE1 NE2 REMARK 470 LEU A 66 CG CD1 CD2 REMARK 470 GLU A 91 CG CD OE1 OE2 REMARK 470 ILE A 97 CG1 CG2 CD1 REMARK 470 ASN A 100 CG OD1 ND2 REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 LEU A 138 CG CD1 CD2 REMARK 470 ASP A 157 CG OD1 OD2 REMARK 470 GLU A 190 CG CD OE1 OE2 REMARK 470 LEU A 261 CG CD1 CD2 REMARK 470 LYS A 276 CE NZ REMARK 470 GLU A 281 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 194 C2 MAN A 801 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 68 -100.62 59.50 REMARK 500 ASP A 172 101.47 -161.24 REMARK 500 LEU A 231 95.35 -66.32 REMARK 500 GLN A 259 -94.51 -97.00 REMARK 500 ASN A 268 -63.35 -94.74 REMARK 500 VAL A 311 -72.47 -108.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 807 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 GLU A 64 OE2 113.6 REMARK 620 3 ASP A 96 OD2 121.5 85.7 REMARK 620 4 ILE A 97 O 73.2 158.3 108.9 REMARK 620 5 ASP A 132 OD1 141.1 69.7 97.2 92.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 808 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE1 REMARK 620 2 GLU A 8 OE2 45.8 REMARK 620 3 ASP A 62 OD1 83.1 121.3 REMARK 620 4 GLU A 64 OE1 83.4 102.3 96.8 REMARK 620 5 ASP A 99 OD1 123.2 84.7 153.2 82.7 REMARK 620 6 ASP A 99 OD2 175.4 131.6 101.0 94.2 52.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 803 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 98 OD1 REMARK 620 2 ASN A 100 O 123.8 REMARK 620 3 ASP A 132 OD2 83.7 68.7 REMARK 620 4 ASN A 136 O 106.4 110.3 73.0 REMARK 620 5 ASP A 187 OD2 114.2 121.1 130.4 57.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 804 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 115 OE1 REMARK 620 2 GLU A 174 OE1 97.9 REMARK 620 3 GLU A 174 OE2 70.3 53.3 REMARK 620 4 ASP A 205 OD1 108.9 71.8 123.4 REMARK 620 5 THR A 206 O 87.9 169.7 137.0 98.3 REMARK 620 6 ASP A 208 OD1 74.9 128.4 77.1 159.5 61.3 REMARK 620 7 ASP A 241 OD1 144.2 89.1 86.8 106.7 91.1 73.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 806 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 115 OE1 REMARK 620 2 GLU A 115 OE2 42.4 REMARK 620 3 ASP A 172 OD1 104.2 61.8 REMARK 620 4 GLU A 174 OE2 67.3 63.0 82.1 REMARK 620 5 ASP A 208 OD2 89.2 131.6 166.5 103.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 805 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 207 OD1 REMARK 620 2 ASN A 209 O 116.4 REMARK 620 3 ASP A 239 OD1 143.9 75.8 REMARK 620 4 ASP A 239 OD2 154.6 85.3 50.4 REMARK 620 5 ASP A 241 OD2 76.2 73.3 75.5 125.4 REMARK 620 6 ASN A 245 O 79.5 154.6 80.1 85.6 93.1 REMARK 620 7 ASP A 294 OD2 63.3 107.7 149.1 98.7 135.3 97.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 809 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 224 OE2 REMARK 620 2 ASP A 279 OD1 61.0 REMARK 620 3 ASP A 310 OD1 64.5 125.2 REMARK 620 4 ASP A 310 OD2 72.8 108.9 46.6 REMARK 620 5 ASN A 312 OD1 61.1 88.8 70.1 113.1 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZPL RELATED DB: PDB REMARK 900 RELATED ID: 4ZPM RELATED DB: PDB REMARK 900 RELATED ID: 4ZPN RELATED DB: PDB REMARK 900 RELATED ID: 4ZPO RELATED DB: PDB REMARK 900 RELATED ID: 4ZPP RELATED DB: PDB REMARK 900 RELATED ID: 4ZPQ RELATED DB: PDB DBREF 4ZPS A 1 313 UNP Q91XY0 Q91XY0_MOUSE 30 342 SEQADV 4ZPS HIS A 314 UNP Q91XY0 EXPRESSION TAG SEQADV 4ZPS HIS A 315 UNP Q91XY0 EXPRESSION TAG SEQADV 4ZPS HIS A 316 UNP Q91XY0 EXPRESSION TAG SEQADV 4ZPS HIS A 317 UNP Q91XY0 EXPRESSION TAG SEQADV 4ZPS HIS A 318 UNP Q91XY0 EXPRESSION TAG SEQADV 4ZPS HIS A 319 UNP Q91XY0 EXPRESSION TAG SEQADV 4ZPS HIS A 320 UNP Q91XY0 EXPRESSION TAG SEQADV 4ZPS HIS A 321 UNP Q91XY0 EXPRESSION TAG SEQRES 1 A 321 GLN ILE ARG TYR SER VAL PRO GLU GLU THR ASP LYS GLY SEQRES 2 A 321 THR VAL VAL GLY ASN ILE SER LYS ASP LEU GLY LEU GLU SEQRES 3 A 321 PRO ARG GLU LEU ALA GLU ARG GLY VAL ARG ILE VAL SER SEQRES 4 A 321 ARG GLY ARG SER GLN LEU PHE SER LEU ASN PRO ARG GLY SEQRES 5 A 321 GLY SER LEU VAL THR ALA GLY ARG ILE ASP ARG GLU GLU SEQRES 6 A 321 LEU CYS ALA GLN SER THR PRO CYS LEU VAL ASN ILE ASN SEQRES 7 A 321 ILE LEU VAL GLU GLU LYS GLY LYS LEU PHE GLY VAL GLU SEQRES 8 A 321 ILE GLU ILE THR ASP ILE ASN ASP ASN ASN PRO LYS PHE SEQRES 9 A 321 HIS VAL GLY ASP LEU GLU VAL LYS ILE ASN GLU ILE ALA SEQRES 10 A 321 ALA PRO GLY ALA ARG TYR PRO LEU PRO GLU ALA VAL ASP SEQRES 11 A 321 PRO ASP VAL GLY ILE ASN SER LEU GLN SER TYR GLN LEU SEQRES 12 A 321 SER PRO ASN ARG HIS PHE SER LEU HIS LEU GLN THR GLY SEQRES 13 A 321 ASP ASP GLY THR ILE ASN PRO GLU LEU VAL LEU GLU ARG SEQRES 14 A 321 THR LEU ASP ARG GLU GLU GLU PRO THR HIS HIS LEU VAL SEQRES 15 A 321 LEU THR ALA SER ASP GLY GLY GLU PRO ARG ARG SER SER SEQRES 16 A 321 THR ALA LEU ILE GLN ILE THR VAL LEU ASP THR ASN ASP SEQRES 17 A 321 ASN ALA PRO VAL PHE ASP GLN PRO VAL TYR ARG VAL LYS SEQRES 18 A 321 VAL LEU GLU ASN VAL ALA PRO GLY THR LEU LEU LEU THR SEQRES 19 A 321 VAL ARG ALA SER ASP PRO ASP GLU GLY VAL ASN GLY LYS SEQRES 20 A 321 VAL THR TYR LYS PHE ARG LYS ILE ASN GLU LYS GLN SER SEQRES 21 A 321 LEU LEU PHE HIS LEU HIS GLU ASN THR GLY GLU MET THR SEQRES 22 A 321 VAL ALA LYS ASN LEU ASP TYR GLU GLU CYS SER LEU TYR SEQRES 23 A 321 GLU MET GLU ILE GLN ALA GLU ASP VAL GLY ALA LEU LEU SEQRES 24 A 321 GLY ARG SER LYS VAL ILE ILE MET VAL GLU ASP VAL ASN SEQRES 25 A 321 ASP HIS HIS HIS HIS HIS HIS HIS HIS HET MAN A 801 11 HET MAN A 802 11 HET CA A 803 1 HET CA A 804 1 HET CA A 805 1 HET CA A 806 1 HET CA A 807 1 HET CA A 808 1 HET CA A 809 1 HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 MAN 2(C6 H12 O6) FORMUL 4 CA 7(CA 2+) FORMUL 11 HOH *20(H2 O) HELIX 1 AA1 ASN A 18 LEU A 23 1 6 HELIX 2 AA2 ARG A 28 ARG A 33 1 6 HELIX 3 AA3 ARG A 40 GLN A 44 5 5 HELIX 4 AA4 ASP A 62 CYS A 67 1 6 HELIX 5 AA5 GLU A 242 LYS A 247 5 6 HELIX 6 AA6 ASN A 277 GLU A 282 1 6 SHEET 1 AA1 4 ILE A 2 PRO A 7 0 SHEET 2 AA1 4 LYS A 86 THR A 95 1 O GLU A 91 N ILE A 2 SHEET 3 AA1 4 LEU A 74 VAL A 81 -1 N ILE A 77 O VAL A 90 SHEET 4 AA1 4 VAL A 35 VAL A 38 -1 N VAL A 38 O ASN A 78 SHEET 1 AA2 3 VAL A 15 GLY A 17 0 SHEET 2 AA2 3 SER A 54 THR A 57 -1 O LEU A 55 N VAL A 16 SHEET 3 AA2 3 PHE A 46 ASN A 49 -1 N ASN A 49 O SER A 54 SHEET 1 AA3 2 LYS A 103 PHE A 104 0 SHEET 2 AA3 2 ALA A 128 VAL A 129 -1 O VAL A 129 N LYS A 103 SHEET 1 AA4 4 ASP A 108 ASN A 114 0 SHEET 2 AA4 4 ARG A 193 LEU A 204 1 O GLN A 200 N VAL A 111 SHEET 3 AA4 4 THR A 178 ASP A 187 -1 N LEU A 181 O ILE A 199 SHEET 4 AA4 4 LEU A 138 LEU A 143 -1 N GLN A 139 O SER A 186 SHEET 1 AA5 3 ARG A 122 PRO A 124 0 SHEET 2 AA5 3 ASN A 162 LEU A 167 -1 O LEU A 165 N TYR A 123 SHEET 3 AA5 3 PHE A 149 GLN A 154 -1 N HIS A 152 O GLU A 164 SHEET 1 AA6 2 VAL A 212 PHE A 213 0 SHEET 2 AA6 2 ALA A 237 SER A 238 -1 O SER A 238 N VAL A 212 SHEET 1 AA7 4 VAL A 217 LEU A 223 0 SHEET 2 AA7 4 LEU A 299 GLU A 309 1 O ILE A 305 N TYR A 218 SHEET 3 AA7 4 LEU A 285 GLU A 293 -1 N TYR A 286 O ILE A 306 SHEET 4 AA7 4 THR A 249 PHE A 252 -1 N LYS A 251 O GLN A 291 SHEET 1 AA8 3 LEU A 231 THR A 234 0 SHEET 2 AA8 3 GLU A 271 VAL A 274 -1 O MET A 272 N LEU A 233 SHEET 3 AA8 3 PHE A 263 LEU A 265 -1 N HIS A 264 O THR A 273 SSBOND 1 CYS A 67 CYS A 73 1555 1555 2.04 SSBOND 2 CYS A 283 CYS A 283 1555 7556 2.03 LINK OG SER A 194 C1 MAN A 801 1555 1555 1.44 LINK OG1 THR A 196 C1 MAN A 802 1555 1555 1.43 LINK OE2 GLU A 8 CA CA A 807 1555 1555 2.37 LINK OE1 GLU A 8 CA CA A 808 1555 1555 3.00 LINK OE2 GLU A 8 CA CA A 808 1555 1555 2.52 LINK OD1 ASP A 62 CA CA A 808 1555 1555 2.44 LINK OE2 GLU A 64 CA CA A 807 1555 1555 2.45 LINK OE1 GLU A 64 CA CA A 808 1555 1555 2.45 LINK OD2 ASP A 96 CA CA A 807 1555 1555 2.40 LINK O ILE A 97 CA CA A 807 1555 1555 2.55 LINK OD1 ASN A 98 CA CA A 803 1555 1555 2.56 LINK OD1 ASP A 99 CA CA A 808 1555 1555 2.52 LINK OD2 ASP A 99 CA CA A 808 1555 1555 2.44 LINK O ASN A 100 CA CA A 803 1555 1555 2.48 LINK OE1 GLU A 115 CA CA A 804 1555 1555 2.88 LINK OE1 GLU A 115 CA CA A 806 1555 1555 3.02 LINK OE2 GLU A 115 CA CA A 806 1555 1555 3.05 LINK OD2 ASP A 132 CA CA A 803 1555 1555 2.89 LINK OD1 ASP A 132 CA CA A 807 1555 1555 3.14 LINK O ASN A 136 CA CA A 803 1555 1555 2.99 LINK OD1 ASP A 172 CA CA A 806 1555 1555 2.39 LINK OE1 GLU A 174 CA CA A 804 1555 1555 2.43 LINK OE2 GLU A 174 CA CA A 804 1555 1555 2.46 LINK OE2 GLU A 174 CA CA A 806 1555 1555 2.51 LINK OD2 ASP A 187 CA CA A 803 1555 1555 2.53 LINK OD1 ASP A 205 CA CA A 804 1555 1555 2.47 LINK O THR A 206 CA CA A 804 1555 1555 2.50 LINK OD1 ASN A 207 CA CA A 805 1555 1555 2.68 LINK OD1 ASP A 208 CA CA A 804 1555 1555 2.92 LINK OD2 ASP A 208 CA CA A 806 1555 1555 2.46 LINK O ASN A 209 CA CA A 805 1555 1555 2.40 LINK OE2 GLU A 224 CA CA A 809 1555 1555 3.14 LINK OD1 ASP A 239 CA CA A 805 1555 1555 2.63 LINK OD2 ASP A 239 CA CA A 805 1555 1555 2.52 LINK OD1 ASP A 241 CA CA A 804 1555 1555 2.84 LINK OD2 ASP A 241 CA CA A 805 1555 1555 2.54 LINK O ASN A 245 CA CA A 805 1555 1555 2.46 LINK OD1 ASP A 279 CA CA A 809 1555 1555 3.02 LINK OD2 ASP A 294 CA CA A 805 1555 1555 2.60 LINK OD1 ASP A 310 CA CA A 809 1555 1555 2.96 LINK OD2 ASP A 310 CA CA A 809 1555 1555 2.47 LINK OD1 ASN A 312 CA CA A 809 1555 1555 3.13 CISPEP 1 GLU A 190 PRO A 191 0 -0.03 CRYST1 64.060 78.120 167.730 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015610 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005962 0.00000