HEADER TRANSFERASE 08-MAY-15 4ZQ8 TITLE CRYSTAL STRUCTURE OF A TERPENE SYNTHASE FROM STREPTOMYCES LYDICUS, TITLE 2 TARGET EFI-540129 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPRENOID SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES LYDICUS; SOURCE 3 ORGANISM_TAXID: 47763; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ENZYME FUNCTION INITIATIVE, EFI, STRUCTURAL GENOMICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.TORO,R.BHOSLE,M.W.VETTING,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN, AUTHOR 2 S.SOJITRA,M.STEAD,E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS, AUTHOR 3 B.HILLERICH,J.LOVE,R.D.SEIDEL,K.L.WHALEN,J.A.GERLT,C.D.POULTER, AUTHOR 4 S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 2 27-SEP-23 4ZQ8 1 SOURCE REMARK REVDAT 1 08-JUL-15 4ZQ8 0 JRNL AUTH R.TORO,R.BHOSLE,M.W.VETTING,N.F.AL OBAIDI,L.L.MORISCO, JRNL AUTH 2 S.R.WASSERMAN,S.SOJITRA,M.STEAD,E.WASHINGTON,A.SCOTT GLENN, JRNL AUTH 3 S.CHOWDHURY,B.EVANS,B.HILLERICH,J.LOVE,R.D.SEIDEL, JRNL AUTH 4 K.L.WHALEN,J.A.GERLT,C.D.POULTER,S.C.ALMO, JRNL AUTH 5 ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF A TERPENE SYNTHASE FROM STREPTOMYCES JRNL TITL 2 LYDICUS, TARGET EFI-540129 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 49969 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.8450 - 5.1832 0.93 2801 141 0.1461 0.1790 REMARK 3 2 5.1832 - 4.1194 0.94 2723 146 0.1323 0.1712 REMARK 3 3 4.1194 - 3.6003 0.94 2693 150 0.1575 0.2035 REMARK 3 4 3.6003 - 3.2718 0.92 2651 144 0.1844 0.2477 REMARK 3 5 3.2718 - 3.0377 0.93 2658 150 0.1886 0.2414 REMARK 3 6 3.0377 - 2.8588 0.94 2683 149 0.2004 0.2513 REMARK 3 7 2.8588 - 2.7158 0.94 2640 137 0.1982 0.3164 REMARK 3 8 2.7158 - 2.5977 0.94 2669 136 0.1896 0.2900 REMARK 3 9 2.5977 - 2.4978 0.94 2678 148 0.1949 0.2565 REMARK 3 10 2.4978 - 2.4117 0.94 2649 147 0.1957 0.2814 REMARK 3 11 2.4117 - 2.3363 0.95 2694 127 0.2015 0.2716 REMARK 3 12 2.3363 - 2.2696 0.89 2541 127 0.2963 0.4725 REMARK 3 13 2.2696 - 2.2099 0.92 2581 139 0.3791 0.4626 REMARK 3 14 2.2099 - 2.1560 0.93 2593 141 0.2732 0.3414 REMARK 3 15 2.1560 - 2.1070 0.94 2680 131 0.2154 0.2735 REMARK 3 16 2.1070 - 2.0622 0.94 2640 141 0.2517 0.3096 REMARK 3 17 2.0622 - 2.0209 0.95 2644 144 0.2248 0.2978 REMARK 3 18 2.0209 - 2.0000 0.79 2237 116 0.2364 0.3068 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5225 REMARK 3 ANGLE : 0.998 7125 REMARK 3 CHIRALITY : 0.040 758 REMARK 3 PLANARITY : 0.006 953 REMARK 3 DIHEDRAL : 14.145 1889 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 29 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.0394 -6.2688 13.3979 REMARK 3 T TENSOR REMARK 3 T11: 0.2267 T22: 0.1278 REMARK 3 T33: 0.2435 T12: 0.0171 REMARK 3 T13: 0.0125 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 0.7235 L22: 1.4335 REMARK 3 L33: 1.6770 L12: 0.3229 REMARK 3 L13: 0.4647 L23: -0.2907 REMARK 3 S TENSOR REMARK 3 S11: -0.0520 S12: 0.0439 S13: 0.2893 REMARK 3 S21: 0.0038 S22: 0.0677 S23: 0.2090 REMARK 3 S31: -0.2288 S32: -0.0326 S33: -0.0210 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 112 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.9677 -27.4464 21.8054 REMARK 3 T TENSOR REMARK 3 T11: 0.1631 T22: 0.2080 REMARK 3 T33: 0.1808 T12: -0.0096 REMARK 3 T13: -0.0052 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.4371 L22: 0.6716 REMARK 3 L33: 3.2091 L12: -0.5161 REMARK 3 L13: -1.2364 L23: 0.5923 REMARK 3 S TENSOR REMARK 3 S11: 0.1083 S12: -0.1493 S13: 0.1015 REMARK 3 S21: 0.0236 S22: -0.0028 S23: -0.0442 REMARK 3 S31: -0.2016 S32: -0.1842 S33: -0.0682 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 143 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.5006 -23.4398 16.2730 REMARK 3 T TENSOR REMARK 3 T11: 0.1369 T22: 0.1760 REMARK 3 T33: 0.1726 T12: 0.0144 REMARK 3 T13: 0.0037 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.3432 L22: 0.6418 REMARK 3 L33: 1.1668 L12: 0.1956 REMARK 3 L13: -0.1038 L23: 0.0800 REMARK 3 S TENSOR REMARK 3 S11: -0.0205 S12: 0.0143 S13: 0.0533 REMARK 3 S21: -0.0794 S22: 0.0190 S23: 0.0111 REMARK 3 S31: -0.0666 S32: 0.0472 S33: 0.0021 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 242 THROUGH 352 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4111 -10.9834 25.5692 REMARK 3 T TENSOR REMARK 3 T11: 0.1670 T22: 0.1777 REMARK 3 T33: 0.2180 T12: -0.0260 REMARK 3 T13: -0.0145 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.5530 L22: 1.0913 REMARK 3 L33: 3.0227 L12: 0.1034 REMARK 3 L13: -0.0983 L23: 0.0702 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: -0.0121 S13: 0.1159 REMARK 3 S21: 0.0259 S22: 0.0663 S23: -0.0074 REMARK 3 S31: -0.2827 S32: 0.1216 S33: -0.1030 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 28 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3582 -58.1397 15.7951 REMARK 3 T TENSOR REMARK 3 T11: 0.3647 T22: 0.2074 REMARK 3 T33: 0.3262 T12: 0.0650 REMARK 3 T13: -0.0662 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 4.4886 L22: 1.1224 REMARK 3 L33: 1.4416 L12: 0.3346 REMARK 3 L13: 1.7365 L23: 0.5437 REMARK 3 S TENSOR REMARK 3 S11: 0.1786 S12: 0.0979 S13: -0.6866 REMARK 3 S21: 0.1415 S22: 0.0766 S23: -0.2856 REMARK 3 S31: 0.4123 S32: 0.1709 S33: -0.1880 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 61 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0629 -51.1335 21.1493 REMARK 3 T TENSOR REMARK 3 T11: 0.2667 T22: 0.2030 REMARK 3 T33: 0.2571 T12: 0.0316 REMARK 3 T13: -0.0326 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.9718 L22: 0.9900 REMARK 3 L33: 1.7056 L12: -0.3225 REMARK 3 L13: -0.1287 L23: 0.2208 REMARK 3 S TENSOR REMARK 3 S11: -0.0266 S12: -0.2123 S13: -0.2686 REMARK 3 S21: 0.2577 S22: 0.0159 S23: -0.0933 REMARK 3 S31: 0.5154 S32: 0.3385 S33: 0.0135 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 112 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.6612 -36.0878 21.7585 REMARK 3 T TENSOR REMARK 3 T11: 0.1731 T22: 0.1873 REMARK 3 T33: 0.1704 T12: 0.0073 REMARK 3 T13: -0.0120 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.8254 L22: 0.2812 REMARK 3 L33: 0.9350 L12: -0.0375 REMARK 3 L13: -0.2708 L23: 0.2064 REMARK 3 S TENSOR REMARK 3 S11: -0.0266 S12: -0.0457 S13: -0.0120 REMARK 3 S21: 0.0671 S22: 0.0241 S23: -0.0804 REMARK 3 S31: 0.1161 S32: 0.0816 S33: 0.0014 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESID 242 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.3481 -46.9756 13.1893 REMARK 3 T TENSOR REMARK 3 T11: 0.1800 T22: 0.1802 REMARK 3 T33: 0.1796 T12: -0.0250 REMARK 3 T13: -0.0115 T23: -0.0337 REMARK 3 L TENSOR REMARK 3 L11: 1.8499 L22: 1.2086 REMARK 3 L33: 2.2314 L12: 0.5846 REMARK 3 L13: -1.4242 L23: -0.3813 REMARK 3 S TENSOR REMARK 3 S11: -0.1218 S12: 0.1590 S13: -0.1360 REMARK 3 S21: 0.0764 S22: 0.0536 S23: 0.0458 REMARK 3 S31: 0.2530 S32: -0.2141 S33: 0.0657 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESID 318 THROUGH 352 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7329 -53.8087 10.6399 REMARK 3 T TENSOR REMARK 3 T11: 0.2553 T22: 0.1690 REMARK 3 T33: 0.2170 T12: -0.0105 REMARK 3 T13: 0.0010 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 2.6168 L22: 1.5165 REMARK 3 L33: 1.2175 L12: 0.6378 REMARK 3 L13: -0.4993 L23: -0.0439 REMARK 3 S TENSOR REMARK 3 S11: -0.0046 S12: -0.3010 S13: -0.3409 REMARK 3 S21: 0.1127 S22: -0.1138 S23: -0.0747 REMARK 3 S31: 0.3156 S32: 0.0950 S33: 0.1057 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZQ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209702. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50304 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.48700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: 4LA6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (43 MG/ML, 10 MM HEPES PH REMARK 280 7.5); RESERVOIR (0.1 M BICINE PH 9.0, 20% PEG 6000); CRYO (20% REMARK 280 GLYCEROL), PH 4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.58950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.58950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.36850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 76.89050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.36850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 76.89050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 77.58950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.36850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 76.89050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.58950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.36850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 76.89050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 634 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 682 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 736 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 465 PRO A 5 REMARK 465 LYS A 6 REMARK 465 THR A 7 REMARK 465 THR A 8 REMARK 465 ALA A 9 REMARK 465 GLY A 10 REMARK 465 PHE A 11 REMARK 465 THR A 12 REMARK 465 LEU A 13 REMARK 465 PRO A 14 REMARK 465 GLY A 15 REMARK 465 PRO A 16 REMARK 465 PRO A 17 REMARK 465 THR A 18 REMARK 465 LEU A 19 REMARK 465 THR A 20 REMARK 465 ARG A 21 REMARK 465 THR A 22 REMARK 465 PRO A 23 REMARK 465 ARG A 24 REMARK 465 THR A 25 REMARK 465 ARG A 26 REMARK 465 PRO A 27 REMARK 465 PRO A 65 REMARK 465 SER A 66 REMARK 465 GLU A 67 REMARK 465 TRP A 68 REMARK 465 SER A 69 REMARK 465 MET B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 PRO B 4 REMARK 465 PRO B 5 REMARK 465 LYS B 6 REMARK 465 THR B 7 REMARK 465 THR B 8 REMARK 465 ALA B 9 REMARK 465 GLY B 10 REMARK 465 PHE B 11 REMARK 465 THR B 12 REMARK 465 LEU B 13 REMARK 465 PRO B 14 REMARK 465 GLY B 15 REMARK 465 PRO B 16 REMARK 465 PRO B 17 REMARK 465 THR B 18 REMARK 465 LEU B 19 REMARK 465 THR B 20 REMARK 465 ARG B 21 REMARK 465 THR B 22 REMARK 465 PRO B 23 REMARK 465 ARG B 24 REMARK 465 THR B 25 REMARK 465 ARG B 26 REMARK 465 PRO B 27 REMARK 465 PRO B 65 REMARK 465 SER B 66 REMARK 465 GLU B 67 REMARK 465 TRP B 68 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 266 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 344 CG OD1 OD2 REMARK 470 ARG B 345 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 286 O HOH A 401 1.95 REMARK 500 N GLY A 28 O HOH A 402 2.10 REMARK 500 O HOH B 776 O HOH B 794 2.13 REMARK 500 O HOH A 635 O HOH A 662 2.15 REMARK 500 O HOH B 643 O HOH B 820 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 138 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 43 108.57 -59.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 217 ASN A 218 -148.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 753 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A 754 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A 755 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH B 835 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH B 836 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 837 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH B 838 DISTANCE = 7.31 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-540129 RELATED DB: TARGETTRACK DBREF 4ZQ8 A -21 352 PDB 4ZQ8 4ZQ8 -21 352 DBREF 4ZQ8 B -21 352 PDB 4ZQ8 4ZQ8 -21 352 SEQRES 1 A 374 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 374 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER THR PRO SEQRES 3 A 374 PRO LYS THR THR ALA GLY PHE THR LEU PRO GLY PRO PRO SEQRES 4 A 374 THR LEU THR ARG THR PRO ARG THR ARG PRO GLY GLY ALA SEQRES 5 A 374 VAL PRO GLY LEU ARG TYR ARG PRO ALA ALA PRO ALA ASP SEQRES 6 A 374 PRO GLU LYS VAL GLU GLU ILE ASP ARG ARG LEU GLU THR SEQRES 7 A 374 TRP ALA ARG GLU LEU ASP LEU PHE PRO SER GLU TRP SER SEQRES 8 A 374 GLY ASP PHE ALA GLU PHE GLN PHE GLY ARG ALA VAL VAL SEQRES 9 A 374 LEU GLN HIS PRO GLY ALA ALA ASP LEU GLU ARG LEU THR SEQRES 10 A 374 ALA ALA GLY LYS LEU LEU LEU ALA GLU ASN ILE VAL ASP SEQRES 11 A 374 ASN CYS TYR CYS GLU GLU ASP GLU GLY ARG GLY GLY ALA SEQRES 12 A 374 HIS ARG GLY LEU GLY GLY ARG LEU ILE MET ALA GLN SER SEQRES 13 A 374 ALA LEU ASP PRO TYR HIS GLY THR PRO GLU HIS GLU GLU SEQRES 14 A 374 GLU TRP ARG ARG GLY VAL GLN ALA ASP GLY PRO LEU ARG SEQRES 15 A 374 SER TYR HIS VAL ALA LEU LYS ASP TYR ALA ALA LEU ALA SEQRES 16 A 374 THR PRO SER GLN THR ASP ARG PHE VAL HIS ASP ILE ALA SEQRES 17 A 374 ARG LEU HIS LEU GLY TYR LEU ALA GLU ALA ALA TRP ALA SEQRES 18 A 374 GLU THR ARG HIS ALA PRO LYS VAL TRP GLU TYR LEU VAL SEQRES 19 A 374 MET ARG GLN PHE ASN ASN PHE ARG PRO CYS LEU SER ILE SEQRES 20 A 374 VAL ASP ALA ILE ASP GLY TYR GLU LEU PRO GLU ALA LEU SEQRES 21 A 374 TYR ALA ARG PRO GLU ILE GLN ARG VAL THR ALA LEU ALA SEQRES 22 A 374 CYS ASN ALA THR THR ILE VAL ASN ASP LEU TYR SER PHE SEQRES 23 A 374 THR ARG GLU LEU ALA SER ASP PRO ASP HIS LEU ASN LEU SEQRES 24 A 374 PRO GLN VAL VAL ALA ALA ASN ASP GLN ARG GLY LEU LYS SEQRES 25 A 374 ALA ALA TYR LEU LYS SER VAL GLU ILE HIS ASN GLN ILE SEQRES 26 A 374 MET GLU ALA PHE GLU THR GLU SER ALA LEU LEU ALA ALA SEQRES 27 A 374 THR SER PRO LEU ILE GLU ARG TYR LEU GLN GLY LEU ALA SEQRES 28 A 374 ASP TRP VAL SER GLY ASN HIS GLU TRP HIS ALA THR ASN SEQRES 29 A 374 THR ASP ARG TYR GLN LEU PRO ASN TYR TRP SEQRES 1 B 374 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 374 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER THR PRO SEQRES 3 B 374 PRO LYS THR THR ALA GLY PHE THR LEU PRO GLY PRO PRO SEQRES 4 B 374 THR LEU THR ARG THR PRO ARG THR ARG PRO GLY GLY ALA SEQRES 5 B 374 VAL PRO GLY LEU ARG TYR ARG PRO ALA ALA PRO ALA ASP SEQRES 6 B 374 PRO GLU LYS VAL GLU GLU ILE ASP ARG ARG LEU GLU THR SEQRES 7 B 374 TRP ALA ARG GLU LEU ASP LEU PHE PRO SER GLU TRP SER SEQRES 8 B 374 GLY ASP PHE ALA GLU PHE GLN PHE GLY ARG ALA VAL VAL SEQRES 9 B 374 LEU GLN HIS PRO GLY ALA ALA ASP LEU GLU ARG LEU THR SEQRES 10 B 374 ALA ALA GLY LYS LEU LEU LEU ALA GLU ASN ILE VAL ASP SEQRES 11 B 374 ASN CYS TYR CYS GLU GLU ASP GLU GLY ARG GLY GLY ALA SEQRES 12 B 374 HIS ARG GLY LEU GLY GLY ARG LEU ILE MET ALA GLN SER SEQRES 13 B 374 ALA LEU ASP PRO TYR HIS GLY THR PRO GLU HIS GLU GLU SEQRES 14 B 374 GLU TRP ARG ARG GLY VAL GLN ALA ASP GLY PRO LEU ARG SEQRES 15 B 374 SER TYR HIS VAL ALA LEU LYS ASP TYR ALA ALA LEU ALA SEQRES 16 B 374 THR PRO SER GLN THR ASP ARG PHE VAL HIS ASP ILE ALA SEQRES 17 B 374 ARG LEU HIS LEU GLY TYR LEU ALA GLU ALA ALA TRP ALA SEQRES 18 B 374 GLU THR ARG HIS ALA PRO LYS VAL TRP GLU TYR LEU VAL SEQRES 19 B 374 MET ARG GLN PHE ASN ASN PHE ARG PRO CYS LEU SER ILE SEQRES 20 B 374 VAL ASP ALA ILE ASP GLY TYR GLU LEU PRO GLU ALA LEU SEQRES 21 B 374 TYR ALA ARG PRO GLU ILE GLN ARG VAL THR ALA LEU ALA SEQRES 22 B 374 CYS ASN ALA THR THR ILE VAL ASN ASP LEU TYR SER PHE SEQRES 23 B 374 THR ARG GLU LEU ALA SER ASP PRO ASP HIS LEU ASN LEU SEQRES 24 B 374 PRO GLN VAL VAL ALA ALA ASN ASP GLN ARG GLY LEU LYS SEQRES 25 B 374 ALA ALA TYR LEU LYS SER VAL GLU ILE HIS ASN GLN ILE SEQRES 26 B 374 MET GLU ALA PHE GLU THR GLU SER ALA LEU LEU ALA ALA SEQRES 27 B 374 THR SER PRO LEU ILE GLU ARG TYR LEU GLN GLY LEU ALA SEQRES 28 B 374 ASP TRP VAL SER GLY ASN HIS GLU TRP HIS ALA THR ASN SEQRES 29 B 374 THR ASP ARG TYR GLN LEU PRO ASN TYR TRP FORMUL 3 HOH *693(H2 O) HELIX 1 AA1 ASP A 43 LEU A 61 1 19 HELIX 2 AA2 ASP A 71 PHE A 75 5 5 HELIX 3 AA3 GLN A 76 HIS A 85 1 10 HELIX 4 AA4 ASP A 90 CYS A 112 1 23 HELIX 5 AA5 ARG A 123 ASP A 137 1 15 HELIX 6 AA6 THR A 142 ALA A 155 1 14 HELIX 7 AA7 ASP A 156 ALA A 171 1 16 HELIX 8 AA8 THR A 174 ARG A 202 1 29 HELIX 9 AA9 LYS A 206 ASN A 217 1 12 HELIX 10 AB1 PHE A 219 SER A 224 1 6 HELIX 11 AB2 ILE A 225 ASP A 230 1 6 HELIX 12 AB3 PRO A 235 ALA A 240 1 6 HELIX 13 AB4 ARG A 241 ASP A 271 1 31 HELIX 14 AB5 ASN A 276 GLN A 286 1 11 HELIX 15 AB6 GLY A 288 ALA A 316 1 29 HELIX 16 AB7 SER A 318 ASN A 342 1 25 HELIX 17 AB8 ASP B 43 LEU B 61 1 19 HELIX 18 AB9 ASP B 71 PHE B 75 5 5 HELIX 19 AC1 GLN B 76 HIS B 85 1 10 HELIX 20 AC2 ASP B 90 CYS B 112 1 23 HELIX 21 AC3 ARG B 123 ASP B 137 1 15 HELIX 22 AC4 THR B 142 ALA B 155 1 14 HELIX 23 AC5 ASP B 156 ALA B 171 1 16 HELIX 24 AC6 THR B 174 ARG B 202 1 29 HELIX 25 AC7 LYS B 206 ASN B 217 1 12 HELIX 26 AC8 PHE B 219 SER B 224 1 6 HELIX 27 AC9 ILE B 225 GLY B 231 1 7 HELIX 28 AD1 PRO B 235 ALA B 240 1 6 HELIX 29 AD2 ARG B 241 ASP B 271 1 31 HELIX 30 AD3 ASN B 276 GLN B 286 1 11 HELIX 31 AD4 GLY B 288 ALA B 316 1 29 HELIX 32 AD5 SER B 318 ASN B 342 1 25 CRYST1 64.737 153.781 155.179 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015447 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006503 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006444 0.00000