HEADER HYDROLASE 12-MAY-15 4ZRS TITLE CRYSTAL STRUCTURE OF A CLONED FERULOYL ESTERASE FROM A SOIL TITLE 2 METAGENOMIC LIBRARY COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FERULOYL ESTERASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A(+) KEYWDS FERULOYL ESTERASE, METAGENOMIC LIBRARY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR W.XIE,R.CHEN,L.CAO,Y.LIU REVDAT 2 08-NOV-23 4ZRS 1 REMARK REVDAT 1 03-FEB-16 4ZRS 0 JRNL AUTH L.C.CAO,R.CHEN,W.XIE,Y.H.LIU JRNL TITL ENHANCING THE THERMOSTABILITY OF FERULOYL ESTERASE ESTF27 BY JRNL TITL 2 DIRECTED EVOLUTION AND THE UNDERLYING STRUCTURAL BASIS JRNL REF J.AGRIC.FOOD CHEM. V. 63 8225 2015 JRNL REFN ESSN 1520-5118 JRNL PMID 26329893 JRNL DOI 10.1021/ACS.JAFC.5B03424 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 43584 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2322 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3209 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 184 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4438 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 615 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.28000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.142 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.138 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.541 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4563 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4261 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6201 ; 1.740 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9781 ; 2.424 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 582 ; 6.151 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 199 ;33.681 ;23.266 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 678 ;14.474 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;19.814 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 672 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5246 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1072 ; 0.011 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2334 ; 1.545 ; 1.648 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2333 ; 1.544 ; 1.647 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2914 ; 2.284 ; 2.459 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2915 ; 2.283 ; 2.460 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2229 ; 2.689 ; 1.916 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2229 ; 2.689 ; 1.916 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3288 ; 4.101 ; 2.758 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5826 ; 6.471 ;15.307 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5826 ; 6.471 ;15.307 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4ZRS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209594. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OTHER REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54056 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : OXFORD ONYX CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45906 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 65.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NSP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2 M AMMONIUM SULFATE, 100 MM HEPES, REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.89500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -15 REMARK 465 GLY A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 MET B -15 REMARK 465 GLY B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 0 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 HIS B 0 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 458 O HOH A 621 1.24 REMARK 500 O HOH A 441 O HOH A 637 1.49 REMARK 500 O HOH B 407 O HOH B 660 1.60 REMARK 500 O HOH A 594 O HOH A 680 1.73 REMARK 500 O HOH B 681 O HOH B 697 1.75 REMARK 500 O HIS B 0 O HOH B 401 1.80 REMARK 500 O LEU B 16 O HOH B 402 1.80 REMARK 500 O HOH B 418 O HOH B 581 1.86 REMARK 500 NE ARG A 129 O HOH A 401 1.87 REMARK 500 O HOH A 682 O HOH A 711 1.87 REMARK 500 O HOH A 527 O HOH A 600 1.89 REMARK 500 OD1 SEB B 151 O HOH B 403 1.92 REMARK 500 OE1 GLU B 40 O HOH B 404 1.93 REMARK 500 O HOH B 599 O HOH B 684 1.95 REMARK 500 OD1 SEB A 151 O HOH A 402 1.96 REMARK 500 O HOH A 602 O HOH A 679 1.97 REMARK 500 O HOH A 498 O HOH A 602 1.98 REMARK 500 O HOH A 527 O HOH A 673 1.99 REMARK 500 O ALA A 85 O HOH A 403 2.02 REMARK 500 O HOH A 612 O HOH A 650 2.03 REMARK 500 ND2 ASN A 217 O HOH A 404 2.03 REMARK 500 O HOH B 578 O HOH B 621 2.03 REMARK 500 O HOH A 402 O HOH A 603 2.04 REMARK 500 N LEU B 16 O HOH B 405 2.04 REMARK 500 CB LEU B 16 O HOH B 673 2.05 REMARK 500 O HOH A 701 O HOH A 708 2.07 REMARK 500 O HOH B 491 O HOH B 520 2.08 REMARK 500 O HOH A 687 O HOH A 688 2.08 REMARK 500 O HOH B 681 O HOH B 692 2.10 REMARK 500 O HOH B 601 O HOH B 620 2.13 REMARK 500 O HOH A 479 O HOH A 485 2.13 REMARK 500 O HOH A 600 O HOH A 673 2.13 REMARK 500 O HOH A 584 O HOH A 684 2.15 REMARK 500 O HOH A 657 O HOH A 667 2.17 REMARK 500 O HOH B 437 O HOH B 559 2.17 REMARK 500 O HOH B 416 O HOH B 498 2.18 REMARK 500 O HOH B 584 O HOH B 651 2.18 REMARK 500 O HOH A 628 O HOH A 642 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 688 O HOH B 675 2646 1.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 14 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 54 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 54 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG B 59 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 129 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG B 129 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 CYS B 243 CA - CB - SG ANGL. DEV. = 9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 77 -12.34 75.13 REMARK 500 PRO A 118 32.70 -95.71 REMARK 500 SEB A 151 -118.55 49.94 REMARK 500 ASN A 262 -159.78 -117.47 REMARK 500 PHE B 77 -11.68 72.68 REMARK 500 PRO B 118 39.52 -98.51 REMARK 500 SEB B 151 -119.87 54.58 REMARK 500 LYS B 164 -38.15 -137.78 REMARK 500 ASN B 262 -158.17 -115.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 301 DBREF 4ZRS A 1 290 UNP E7DJY5 E7DJY5_9BACT 1 290 DBREF 4ZRS B 1 290 UNP E7DJY5 E7DJY5_9BACT 1 290 SEQADV 4ZRS MET A -15 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS GLY A -14 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS A -13 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS A -12 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS A -11 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS A -10 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS A -9 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS A -8 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS GLU A -7 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS ASN A -6 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS LEU A -5 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS TYR A -4 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS PHE A -3 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS GLN A -2 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS GLY A -1 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS A 0 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS ILE A 27 UNP E7DJY5 THR 27 ENGINEERED MUTATION SEQADV 4ZRS LEU A 84 UNP E7DJY5 SER 84 ENGINEERED MUTATION SEQADV 4ZRS ILE A 161 UNP E7DJY5 VAL 161 ENGINEERED MUTATION SEQADV 4ZRS LEU A 195 UNP E7DJY5 HIS 195 ENGINEERED MUTATION SEQADV 4ZRS CYS A 243 UNP E7DJY5 GLY 243 ENGINEERED MUTATION SEQADV 4ZRS VAL A 259 UNP E7DJY5 ALA 259 ENGINEERED MUTATION SEQADV 4ZRS MET B -15 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS GLY B -14 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS B -13 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS B -12 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS B -11 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS B -10 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS B -9 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS B -8 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS GLU B -7 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS ASN B -6 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS LEU B -5 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS TYR B -4 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS PHE B -3 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS GLN B -2 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS GLY B -1 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS HIS B 0 UNP E7DJY5 EXPRESSION TAG SEQADV 4ZRS ILE B 27 UNP E7DJY5 THR 27 ENGINEERED MUTATION SEQADV 4ZRS LEU B 84 UNP E7DJY5 SER 84 ENGINEERED MUTATION SEQADV 4ZRS ILE B 161 UNP E7DJY5 VAL 161 ENGINEERED MUTATION SEQADV 4ZRS LEU B 195 UNP E7DJY5 HIS 195 ENGINEERED MUTATION SEQADV 4ZRS CYS B 243 UNP E7DJY5 GLY 243 ENGINEERED MUTATION SEQADV 4ZRS VAL B 259 UNP E7DJY5 ALA 259 ENGINEERED MUTATION SEQRES 1 A 306 MET GLY HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE SEQRES 2 A 306 GLN GLY HIS MET THR PRO GLU LEU ARG ALA LYS LEU GLU SEQRES 3 A 306 SER LEU GLY ARG ASP LEU THR PRO GLU MET LEU GLY GLY SEQRES 4 A 306 THR THR GLN ILE PHE ALA ALA MET ALA THR GLY SER ASP SEQRES 5 A 306 PRO GLU VAL GLU VAL THR ARG ASP LEU GLU TYR GLY GLU SEQRES 6 A 306 ASP PRO ARG HIS ARG LEU ASP LEU PHE ARG LYS ALA ASP SEQRES 7 A 306 THR ARG ASP ALA PRO VAL LEU VAL PHE VAL HIS GLY GLY SEQRES 8 A 306 GLY PHE VAL MET GLY ASP LYS ARG LEU ALA GLU THR PRO SEQRES 9 A 306 PHE TYR ASP ASN ILE GLY VAL PHE ALA ALA GLN GLN GLY SEQRES 10 A 306 PHE VAL GLY VAL THR ILE THR TYR ARG LEU ALA PRO ALA SEQRES 11 A 306 HIS GLN PHE PRO SER GLY PRO GLU ASP LEU ALA ALA VAL SEQRES 12 A 306 VAL ARG TRP LEU LYS ALA ASN VAL ALA GLN TYR GLY GLY SEQRES 13 A 306 ASP PRO ASP LYS ILE VAL LEU SER GLY GLN SEB ALA GLY SEQRES 14 A 306 ALA ALA HIS VAL ALA SER TYR ILE ALA HIS LYS ALA HIS SEQRES 15 A 306 HIS ALA THR GLU GLY GLY GLY ILE ALA GLY ALA ILE LEU SEQRES 16 A 306 MET SER GLY ILE TYR ASP THR LEU THR ALA THR PRO ASN SEQRES 17 A 306 GLU PHE LEU ILE ALA TYR TYR GLY ASP ASP PRO LYS GLY SEQRES 18 A 306 TRP GLY PRO ALA SER SER MET ALA GLY LEU ILE ASN THR SEQRES 19 A 306 GLU ILE PRO LEU MET LEU THR VAL SER GLU PHE ASP PRO SEQRES 20 A 306 GLU ASP PHE GLN ARG GLN ALA ALA GLN PHE VAL CYS ALA SEQRES 21 A 306 TRP GLY MET ALA HIS ALA ALA TYR PRO GLU MET HIS TYR SEQRES 22 A 306 LEU VAL GLY HIS ASN HIS LEU SER PRO ALA GLN SER ILE SEQRES 23 A 306 GLY THR GLU ILE LYS ALA ILE GLY ARG MET VAL ALA GLY SEQRES 24 A 306 PHE VAL ARG ARG VAL THR ARG SEQRES 1 B 306 MET GLY HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE SEQRES 2 B 306 GLN GLY HIS MET THR PRO GLU LEU ARG ALA LYS LEU GLU SEQRES 3 B 306 SER LEU GLY ARG ASP LEU THR PRO GLU MET LEU GLY GLY SEQRES 4 B 306 THR THR GLN ILE PHE ALA ALA MET ALA THR GLY SER ASP SEQRES 5 B 306 PRO GLU VAL GLU VAL THR ARG ASP LEU GLU TYR GLY GLU SEQRES 6 B 306 ASP PRO ARG HIS ARG LEU ASP LEU PHE ARG LYS ALA ASP SEQRES 7 B 306 THR ARG ASP ALA PRO VAL LEU VAL PHE VAL HIS GLY GLY SEQRES 8 B 306 GLY PHE VAL MET GLY ASP LYS ARG LEU ALA GLU THR PRO SEQRES 9 B 306 PHE TYR ASP ASN ILE GLY VAL PHE ALA ALA GLN GLN GLY SEQRES 10 B 306 PHE VAL GLY VAL THR ILE THR TYR ARG LEU ALA PRO ALA SEQRES 11 B 306 HIS GLN PHE PRO SER GLY PRO GLU ASP LEU ALA ALA VAL SEQRES 12 B 306 VAL ARG TRP LEU LYS ALA ASN VAL ALA GLN TYR GLY GLY SEQRES 13 B 306 ASP PRO ASP LYS ILE VAL LEU SER GLY GLN SEB ALA GLY SEQRES 14 B 306 ALA ALA HIS VAL ALA SER TYR ILE ALA HIS LYS ALA HIS SEQRES 15 B 306 HIS ALA THR GLU GLY GLY GLY ILE ALA GLY ALA ILE LEU SEQRES 16 B 306 MET SER GLY ILE TYR ASP THR LEU THR ALA THR PRO ASN SEQRES 17 B 306 GLU PHE LEU ILE ALA TYR TYR GLY ASP ASP PRO LYS GLY SEQRES 18 B 306 TRP GLY PRO ALA SER SER MET ALA GLY LEU ILE ASN THR SEQRES 19 B 306 GLU ILE PRO LEU MET LEU THR VAL SER GLU PHE ASP PRO SEQRES 20 B 306 GLU ASP PHE GLN ARG GLN ALA ALA GLN PHE VAL CYS ALA SEQRES 21 B 306 TRP GLY MET ALA HIS ALA ALA TYR PRO GLU MET HIS TYR SEQRES 22 B 306 LEU VAL GLY HIS ASN HIS LEU SER PRO ALA GLN SER ILE SEQRES 23 B 306 GLY THR GLU ILE LYS ALA ILE GLY ARG MET VAL ALA GLY SEQRES 24 B 306 PHE VAL ARG ARG VAL THR ARG MODRES 4ZRS SEB A 151 SER MODIFIED RESIDUE MODRES 4ZRS SEB B 151 SER MODIFIED RESIDUE HET SEB A 151 16 HET SEB B 151 16 HET GOL A 301 6 HET GOL B 301 6 HETNAM SEB O-BENZYLSULFONYL-SERINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 SEB 2(C10 H13 N O5 S) FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *615(H2 O) HELIX 1 AA1 THR A 2 GLY A 13 1 12 HELIX 2 AA2 THR A 17 ALA A 30 1 14 HELIX 3 AA3 TYR A 90 GLN A 100 1 11 HELIX 4 AA4 PRO A 118 VAL A 135 1 18 HELIX 5 AA5 ALA A 136 TYR A 138 5 3 HELIX 6 AA6 SEB A 151 HIS A 163 1 13 HELIX 7 AA7 LYS A 164 HIS A 167 5 4 HELIX 8 AA8 THR A 169 GLY A 173 5 5 HELIX 9 AA9 ASN A 192 GLY A 200 1 9 HELIX 10 AB1 ASP A 202 SER A 210 5 9 HELIX 11 AB2 SER A 211 THR A 218 1 8 HELIX 12 AB3 PRO A 231 ALA A 250 1 20 HELIX 13 AB4 LEU A 264 SER A 269 1 6 HELIX 14 AB5 LYS A 275 THR A 289 1 15 HELIX 15 AB6 THR B 2 GLY B 13 1 12 HELIX 16 AB7 THR B 17 ALA B 30 1 14 HELIX 17 AB8 TYR B 90 GLN B 100 1 11 HELIX 18 AB9 PRO B 118 VAL B 135 1 18 HELIX 19 AC1 ALA B 136 TYR B 138 5 3 HELIX 20 AC2 SEB B 151 LYS B 164 1 14 HELIX 21 AC3 HIS B 167 GLY B 171 5 5 HELIX 22 AC4 ASN B 192 GLY B 200 1 9 HELIX 23 AC5 ASP B 202 SER B 210 5 9 HELIX 24 AC6 SER B 211 THR B 218 1 8 HELIX 25 AC7 PRO B 231 ALA B 250 1 20 HELIX 26 AC8 LEU B 264 SER B 269 1 6 HELIX 27 AC9 LYS B 275 THR B 289 1 15 SHEET 1 AA1 8 GLU A 40 GLU A 46 0 SHEET 2 AA1 8 ARG A 54 ARG A 59 -1 O ARG A 59 N GLU A 40 SHEET 3 AA1 8 VAL A 103 ILE A 107 -1 O GLY A 104 N PHE A 58 SHEET 4 AA1 8 ALA A 66 VAL A 72 1 N PRO A 67 O VAL A 103 SHEET 5 AA1 8 GLY A 140 GLN A 150 1 O ASP A 141 N ALA A 66 SHEET 6 AA1 8 GLY A 176 MET A 180 1 O MET A 180 N GLY A 149 SHEET 7 AA1 8 LEU A 222 SER A 227 1 O MET A 223 N LEU A 179 SHEET 8 AA1 8 MET A 255 LEU A 258 1 O HIS A 256 N LEU A 224 SHEET 1 AA2 8 GLU B 40 GLU B 46 0 SHEET 2 AA2 8 ARG B 54 ARG B 59 -1 O ARG B 59 N GLU B 40 SHEET 3 AA2 8 VAL B 103 ILE B 107 -1 O GLY B 104 N PHE B 58 SHEET 4 AA2 8 ALA B 66 VAL B 72 1 N PRO B 67 O VAL B 103 SHEET 5 AA2 8 GLY B 140 GLN B 150 1 O VAL B 146 N VAL B 68 SHEET 6 AA2 8 GLY B 176 MET B 180 1 O MET B 180 N GLY B 149 SHEET 7 AA2 8 LEU B 222 SER B 227 1 O MET B 223 N LEU B 179 SHEET 8 AA2 8 MET B 255 LEU B 258 1 O HIS B 256 N LEU B 224 SSBOND 1 CYS A 243 CYS B 243 1555 1555 2.04 LINK C GLN A 150 N SEB A 151 1555 1555 1.32 LINK C SEB A 151 N ALA A 152 1555 1555 1.32 LINK C GLN B 150 N SEB B 151 1555 1555 1.33 LINK C SEB B 151 N ALA B 152 1555 1555 1.34 CISPEP 1 GLY A -1 HIS A 0 0 -12.67 CISPEP 2 PHE A 89 TYR A 90 0 -0.60 CISPEP 3 ALA A 112 PRO A 113 0 2.85 CISPEP 4 PHE A 117 PRO A 118 0 4.93 CISPEP 5 GLY B -1 HIS B 0 0 -1.60 CISPEP 6 PHE B 89 TYR B 90 0 2.42 CISPEP 7 ALA B 112 PRO B 113 0 3.65 CISPEP 8 PHE B 117 PRO B 118 0 6.86 SITE 1 AC1 8 PRO A 221 LEU A 222 TRP A 245 PRO A 253 SITE 2 AC1 8 GLU A 254 HOH A 475 HOH A 528 HOH A 609 SITE 1 AC2 7 PRO B 221 LEU B 222 TRP B 245 GLU B 254 SITE 2 AC2 7 HOH B 480 HOH B 496 HOH B 589 CRYST1 52.156 101.790 69.822 90.00 110.62 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019173 0.000000 0.007215 0.00000 SCALE2 0.000000 0.009824 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015303 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.999961 -0.008652 -0.001736 0.19362 1 MTRIX2 2 -0.008653 -0.999963 -0.000424 17.91032 1 MTRIX3 2 -0.001733 0.000439 -0.999998 65.31759 1