HEADER IMMUNE SYSTEM 14-MAY-15 4ZTO TITLE FAB/EPITOPE COMPLEX STRUCTURE OF RABBIT MONOCLONAL ANTIBODY R53 TITLE 2 TARGETING AN EPITOPE IN HIV-1 GP120 C4 REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: RABBIT MONOCLONAL ANTIBODY R53 FAB LIGHT CHAIN; COMPND 3 CHAIN: L, M; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RABBIT MONOCLONAL ANTIBODY R53 FAB HEAVY CHAIN; COMPND 7 CHAIN: H, I; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: EPITOPE OF RABBIT MONOCLONAL ANTIBODY R53; COMPND 11 CHAIN: P, Q; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 9 ORGANISM_COMMON: RABBIT; SOURCE 10 ORGANISM_TAXID: 9986; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 16 ORGANISM_TAXID: 11676 KEYWDS HIV-1, ENV, C4, CD4, MONOCLONAL ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR R.PAN,X.-P.KONG REVDAT 4 27-SEP-23 4ZTO 1 JRNL REVDAT 3 11-DEC-19 4ZTO 1 REMARK REVDAT 2 20-SEP-17 4ZTO 1 REMARK REVDAT 1 19-AUG-15 4ZTO 0 JRNL AUTH R.PAN,Y.CHEN,M.VAINE,G.HU,S.WANG,S.LU,X.P.KONG JRNL TITL STRUCTURAL ANALYSIS OF A NOVEL RABBIT MONOCLONAL ANTIBODY JRNL TITL 2 R53 TARGETING AN EPITOPE IN HIV-1 GP120 C4 REGION CRITICAL JRNL TITL 3 FOR RECEPTOR AND CO-RECEPTOR BINDING. JRNL REF EMERG MICROBES INFECT V. 4 E44 2015 JRNL REFN ESSN 2222-1751 JRNL PMID 26251831 JRNL DOI 10.1038/EMI.2015.44 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.280 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 45616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2299 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.1511 - 5.7916 0.97 2892 152 0.1799 0.2104 REMARK 3 2 5.7916 - 4.5985 0.99 2816 141 0.1411 0.1909 REMARK 3 3 4.5985 - 4.0177 0.99 2747 135 0.1352 0.1819 REMARK 3 4 4.0177 - 3.6505 0.99 2789 139 0.1488 0.1939 REMARK 3 5 3.6505 - 3.3890 0.99 2733 145 0.1558 0.2048 REMARK 3 6 3.3890 - 3.1892 1.00 2723 153 0.1587 0.1944 REMARK 3 7 3.1892 - 3.0295 0.99 2723 136 0.1633 0.2003 REMARK 3 8 3.0295 - 2.8977 0.99 2749 128 0.1738 0.2207 REMARK 3 9 2.8977 - 2.7862 0.99 2706 141 0.1777 0.2395 REMARK 3 10 2.7862 - 2.6900 0.99 2713 153 0.1748 0.2536 REMARK 3 11 2.6900 - 2.6059 0.98 2678 143 0.1869 0.2635 REMARK 3 12 2.6059 - 2.5314 0.98 2662 133 0.1920 0.2894 REMARK 3 13 2.5314 - 2.4648 0.97 2607 173 0.2010 0.2539 REMARK 3 14 2.4648 - 2.4047 0.97 2646 143 0.2078 0.2929 REMARK 3 15 2.4047 - 2.3500 0.95 2566 164 0.2011 0.2877 REMARK 3 16 2.3500 - 2.3000 0.94 2567 120 0.2040 0.3046 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6806 REMARK 3 ANGLE : 1.073 9305 REMARK 3 CHIRALITY : 0.039 1096 REMARK 3 PLANARITY : 0.005 1181 REMARK 3 DIHEDRAL : 13.051 2359 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZTO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209882. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48392 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.260 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.16500 REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48300 REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4JO1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% POLYETHYLENE GLYCOL 6000, 0.1 M REMARK 280 CITRIC ACID, AND 0.02% NAN3, PH 5.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.14150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.61850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.41550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.61850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.14150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.41550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, I, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 210 REMARK 465 THR H 211 REMARK 465 VAL P 430 REMARK 465 GLN P 442 REMARK 465 ILE P 443 REMARK 465 ARG P 444 REMARK 465 SER I 210 REMARK 465 THR I 211 REMARK 465 VAL Q 430 REMARK 465 GLY Q 441 REMARK 465 GLN Q 442 REMARK 465 ILE Q 443 REMARK 465 ARG Q 444 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH I 521 O HOH I 538 1.81 REMARK 500 O HOH H 342 O HOH H 460 1.87 REMARK 500 N GLY Q 431 O HOH Q 501 1.91 REMARK 500 O HOH M 428 O HOH M 454 1.93 REMARK 500 ND2 ASN L 90 O HOH L 301 1.97 REMARK 500 O HOH I 470 O HOH I 533 1.97 REMARK 500 O HOH I 321 O HOH I 489 2.01 REMARK 500 OG SER I 187 O HOH I 301 2.01 REMARK 500 O HOH M 338 O HOH M 444 2.01 REMARK 500 O HOH L 362 O HOH L 439 2.01 REMARK 500 N GLY L 209 O HOH L 302 2.02 REMARK 500 NZ LYS H 70 O HOH H 301 2.02 REMARK 500 OH TYR H 58 O HOH H 302 2.02 REMARK 500 O HOH I 345 O HOH I 490 2.02 REMARK 500 O HOH I 451 O HOH I 457 2.03 REMARK 500 NH1 ARG H 163 O HOH H 303 2.05 REMARK 500 O HOH M 368 O HOH M 441 2.05 REMARK 500 O HOH H 414 O HOH H 523 2.06 REMARK 500 OE2 GLU H 147 O HOH H 304 2.07 REMARK 500 O HOH I 332 O HOH I 436 2.07 REMARK 500 O HOH I 444 O HOH I 485 2.08 REMARK 500 O HOH M 444 O HOH M 474 2.09 REMARK 500 O HOH M 443 O HOH M 450 2.11 REMARK 500 O HOH M 435 O HOH M 466 2.12 REMARK 500 O ALA L 121 O HOH L 303 2.13 REMARK 500 O HOH L 412 O HOH L 492 2.13 REMARK 500 O HOH M 401 O HOH M 546 2.14 REMARK 500 O HOH L 501 O HOH L 529 2.15 REMARK 500 OD1 ASP L 210 O HOH L 304 2.15 REMARK 500 O HOH H 361 O HOH H 488 2.15 REMARK 500 O HOH I 400 O HOH I 515 2.15 REMARK 500 O HOH L 514 O HOH L 535 2.17 REMARK 500 O HOH I 351 O HOH I 515 2.17 REMARK 500 OG SER H 73 O HOH H 305 2.18 REMARK 500 O HOH I 308 O HOH I 520 2.18 REMARK 500 OE1 GLU I 45 O HOH I 302 2.19 REMARK 500 O HOH M 477 O HOH M 479 2.19 REMARK 500 OD1 ASP I 27 O HOH I 303 2.19 REMARK 500 O HOH L 402 O HOH L 407 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH H 480 O HOH Q 511 2355 1.92 REMARK 500 O HOH I 446 O HOH I 452 3454 1.92 REMARK 500 O HOH H 378 O HOH M 444 4545 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP L 30 -119.24 50.56 REMARK 500 ALA L 51 -41.72 67.33 REMARK 500 LYS L 189 -60.23 -107.59 REMARK 500 ASP M 30 -116.44 55.18 REMARK 500 MET M 48 127.16 -171.85 REMARK 500 ALA M 51 -41.71 71.61 REMARK 500 LEU M 78 132.18 -39.20 REMARK 500 SER M 95 -177.68 -175.22 REMARK 500 ALA M 121 151.53 -49.27 REMARK 500 LYS M 138 73.35 45.93 REMARK 500 SER I 186 9.59 -69.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH L 539 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH L 540 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH M 552 DISTANCE = 5.89 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZTP RELATED DB: PDB REMARK 900 RELATED ID: 4ZYT RELATED DB: PDB REMARK 900 RELATED ID: 4ZYU RELATED DB: PDB REMARK 900 RELATED ID: 4ZYV RELATED DB: PDB REMARK 900 RELATED ID: 4ZYW RELATED DB: PDB REMARK 900 RELATED ID: 4ZYX RELATED DB: PDB REMARK 900 RELATED ID: 4ZYY RELATED DB: PDB REMARK 900 RELATED ID: 4ZYZ RELATED DB: PDB REMARK 900 RELATED ID: 4ZZ0 RELATED DB: PDB REMARK 900 RELATED ID: 4ZZ2 RELATED DB: PDB REMARK 900 RELATED ID: 4ZZ3 RELATED DB: PDB DBREF 4ZTO L 1 211 PDB 4ZTO 4ZTO 1 211 DBREF 4ZTO H 1 211 PDB 4ZTO 4ZTO 1 211 DBREF 4ZTO P 430 444 PDB 4ZTO 4ZTO 430 444 DBREF 4ZTO M 1 211 PDB 4ZTO 4ZTO 1 211 DBREF 4ZTO I 1 211 PDB 4ZTO 4ZTO 1 211 DBREF 4ZTO Q 430 444 PDB 4ZTO 4ZTO 430 444 SEQRES 1 L 216 GLY PRO VAL LEU THR GLN THR PRO PRO SER ALA SER GLU SEQRES 2 L 216 PRO VAL GLY GLY THR VAL THR ILE LYS CYS GLN ALA SER SEQRES 3 L 216 GLN ALA ILE ASP GLU TYR LEU GLY TRP TYR GLN GLN LYS SEQRES 4 L 216 PRO GLY GLN ARG PRO LYS LEU LEU MET TYR TYR ALA SER SEQRES 5 L 216 THR LEU ALA SER GLY VAL PRO SER ARG PHE LYS GLY SER SEQRES 6 L 216 GLY SER GLY THR GLN PHE THR LEU THR ILE SER ASP LEU SEQRES 7 L 216 GLU CYS ALA ASP ALA ALA THR TYR TYR CYS GLN ASN TYR SEQRES 8 L 216 TYR VAL GLY SER SER THR ASN TYR ALA PHE THR PHE GLY SEQRES 9 L 216 GLY GLY THR GLU VAL VAL VAL LYS GLY ASP PRO VAL ALA SEQRES 10 L 216 PRO THR VAL LEU ILE PHE PRO PRO ALA ALA ASP GLN VAL SEQRES 11 L 216 ALA THR GLY THR VAL THR ILE VAL CYS VAL ALA ASN LYS SEQRES 12 L 216 TYR PHE PRO ASP VAL THR VAL THR TRP GLU VAL ASP GLY SEQRES 13 L 216 THR THR GLN THR THR GLY ILE GLU ASN SER LYS THR PRO SEQRES 14 L 216 GLN ASN SER ALA ASP CYS THR TYR ASN LEU SER SER THR SEQRES 15 L 216 LEU THR LEU THR SER THR GLN TYR ASN SER HIS LYS GLU SEQRES 16 L 216 TYR THR CYS LYS VAL THR GLN GLY THR THR SER VAL VAL SEQRES 17 L 216 GLN SER PHE ASN ARG GLY ASP CYS SEQRES 1 H 223 GLN SER LEU GLU GLU SER GLY GLY GLY PRO VAL LYS PRO SEQRES 2 H 223 GLY GLY THR LEU THR LEU THR CYS LYS ALA SER GLY ILE SEQRES 3 H 223 ASP PHE SER SER PHE TYR TYR MET CYS TRP VAL ARG GLN SEQRES 4 H 223 ALA PRO GLY LYS GLY LEU GLU TRP ILE ALA CYS ILE VAL SEQRES 5 H 223 THR ASP ILE THR GLY GLU SER TYR TYR ALA THR TRP ALA SEQRES 6 H 223 LYS GLY ARG PHE ALA ILE SER LYS THR SER SER THR THR SEQRES 7 H 223 VAL THR LEU GLN MET THR SER LEU THR ALA ALA ASP THR SEQRES 8 H 223 ALA THR TYR PHE CYS ALA ARG GLY ASP THR TYR GLY TYR SEQRES 9 H 223 GLY ASP THR VAL TYR ALA LEU ASN LEU TRP GLY PRO GLY SEQRES 10 H 223 THR LEU VAL THR VAL SER SER GLY GLN PRO LYS ALA PRO SEQRES 11 H 223 SER VAL PHE PRO LEU ALA PRO CYS CYS GLY ASP THR PRO SEQRES 12 H 223 SER SER THR VAL THR LEU GLY CYS LEU VAL LYS GLY TYR SEQRES 13 H 223 LEU PRO GLU PRO VAL THR VAL THR TRP ASN SER GLY THR SEQRES 14 H 223 LEU THR ASN GLY VAL ARG THR PHE PRO SER VAL ARG GLN SEQRES 15 H 223 SER SER GLY LEU TYR SER LEU SER SER VAL VAL SER VAL SEQRES 16 H 223 THR SER SER SER GLN PRO VAL THR CYS ASN VAL ALA HIS SEQRES 17 H 223 PRO ALA THR ASN THR LYS VAL ASP LYS THR VAL ALA PRO SEQRES 18 H 223 SER THR SEQRES 1 P 15 VAL GLY LYS ALA MET TYR ALA PRO PRO ILE ARG GLY GLN SEQRES 2 P 15 ILE ARG SEQRES 1 M 216 GLY PRO VAL LEU THR GLN THR PRO PRO SER ALA SER GLU SEQRES 2 M 216 PRO VAL GLY GLY THR VAL THR ILE LYS CYS GLN ALA SER SEQRES 3 M 216 GLN ALA ILE ASP GLU TYR LEU GLY TRP TYR GLN GLN LYS SEQRES 4 M 216 PRO GLY GLN ARG PRO LYS LEU LEU MET TYR TYR ALA SER SEQRES 5 M 216 THR LEU ALA SER GLY VAL PRO SER ARG PHE LYS GLY SER SEQRES 6 M 216 GLY SER GLY THR GLN PHE THR LEU THR ILE SER ASP LEU SEQRES 7 M 216 GLU CYS ALA ASP ALA ALA THR TYR TYR CYS GLN ASN TYR SEQRES 8 M 216 TYR VAL GLY SER SER THR ASN TYR ALA PHE THR PHE GLY SEQRES 9 M 216 GLY GLY THR GLU VAL VAL VAL LYS GLY ASP PRO VAL ALA SEQRES 10 M 216 PRO THR VAL LEU ILE PHE PRO PRO ALA ALA ASP GLN VAL SEQRES 11 M 216 ALA THR GLY THR VAL THR ILE VAL CYS VAL ALA ASN LYS SEQRES 12 M 216 TYR PHE PRO ASP VAL THR VAL THR TRP GLU VAL ASP GLY SEQRES 13 M 216 THR THR GLN THR THR GLY ILE GLU ASN SER LYS THR PRO SEQRES 14 M 216 GLN ASN SER ALA ASP CYS THR TYR ASN LEU SER SER THR SEQRES 15 M 216 LEU THR LEU THR SER THR GLN TYR ASN SER HIS LYS GLU SEQRES 16 M 216 TYR THR CYS LYS VAL THR GLN GLY THR THR SER VAL VAL SEQRES 17 M 216 GLN SER PHE ASN ARG GLY ASP CYS SEQRES 1 I 223 GLN SER LEU GLU GLU SER GLY GLY GLY PRO VAL LYS PRO SEQRES 2 I 223 GLY GLY THR LEU THR LEU THR CYS LYS ALA SER GLY ILE SEQRES 3 I 223 ASP PHE SER SER PHE TYR TYR MET CYS TRP VAL ARG GLN SEQRES 4 I 223 ALA PRO GLY LYS GLY LEU GLU TRP ILE ALA CYS ILE VAL SEQRES 5 I 223 THR ASP ILE THR GLY GLU SER TYR TYR ALA THR TRP ALA SEQRES 6 I 223 LYS GLY ARG PHE ALA ILE SER LYS THR SER SER THR THR SEQRES 7 I 223 VAL THR LEU GLN MET THR SER LEU THR ALA ALA ASP THR SEQRES 8 I 223 ALA THR TYR PHE CYS ALA ARG GLY ASP THR TYR GLY TYR SEQRES 9 I 223 GLY ASP THR VAL TYR ALA LEU ASN LEU TRP GLY PRO GLY SEQRES 10 I 223 THR LEU VAL THR VAL SER SER GLY GLN PRO LYS ALA PRO SEQRES 11 I 223 SER VAL PHE PRO LEU ALA PRO CYS CYS GLY ASP THR PRO SEQRES 12 I 223 SER SER THR VAL THR LEU GLY CYS LEU VAL LYS GLY TYR SEQRES 13 I 223 LEU PRO GLU PRO VAL THR VAL THR TRP ASN SER GLY THR SEQRES 14 I 223 LEU THR ASN GLY VAL ARG THR PHE PRO SER VAL ARG GLN SEQRES 15 I 223 SER SER GLY LEU TYR SER LEU SER SER VAL VAL SER VAL SEQRES 16 I 223 THR SER SER SER GLN PRO VAL THR CYS ASN VAL ALA HIS SEQRES 17 I 223 PRO ALA THR ASN THR LYS VAL ASP LYS THR VAL ALA PRO SEQRES 18 I 223 SER THR SEQRES 1 Q 15 VAL GLY LYS ALA MET TYR ALA PRO PRO ILE ARG GLY GLN SEQRES 2 Q 15 ILE ARG FORMUL 7 HOH *988(H2 O) HELIX 1 AA1 GLU L 79 ALA L 83 5 5 HELIX 2 AA2 GLN L 124 THR L 127 5 4 HELIX 3 AA3 SER L 182 SER L 187 1 6 HELIX 4 AA4 THR H 82 THR H 86 5 5 HELIX 5 AA5 PRO H 197 THR H 199 5 3 HELIX 6 AA6 GLU M 79 ALA M 83 5 5 HELIX 7 AA7 GLN M 124 THR M 127 5 4 HELIX 8 AA8 SER M 182 SER M 187 1 6 HELIX 9 AA9 THR I 60 LYS I 63 5 4 HELIX 10 AB1 THR I 82 THR I 86 5 5 HELIX 11 AB2 SER I 155 THR I 157 5 3 HELIX 12 AB3 PRO I 197 THR I 199 5 3 SHEET 1 AA1 4 LEU L 4 THR L 7 0 SHEET 2 AA1 4 VAL L 19 ALA L 25 -1 O GLN L 24 N THR L 5 SHEET 3 AA1 4 GLN L 70 ILE L 75 -1 O ILE L 75 N VAL L 19 SHEET 4 AA1 4 PHE L 62 SER L 67 -1 N LYS L 63 O THR L 74 SHEET 1 AA2 6 SER L 10 PRO L 14 0 SHEET 2 AA2 6 THR L 102 LYS L 107 1 O GLU L 103 N ALA L 11 SHEET 3 AA2 6 ALA L 84 ASN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 AA2 6 LEU L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AA2 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AA2 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AA3 2 TYR L 92 SER L 95 0 SHEET 2 AA3 2 ASN L 95C ALA L 95E-1 O ASN L 95C N GLY L 94 SHEET 1 AA4 4 THR L 114 PHE L 118 0 SHEET 2 AA4 4 THR L 129 TYR L 139 -1 O VAL L 135 N LEU L 116 SHEET 3 AA4 4 TYR L 172 THR L 181 -1 O LEU L 180 N VAL L 130 SHEET 4 AA4 4 ILE L 158 LYS L 162 -1 N SER L 161 O SER L 175 SHEET 1 AA5 4 THR L 152 THR L 153 0 SHEET 2 AA5 4 THR L 144 VAL L 149 -1 N VAL L 149 O THR L 152 SHEET 3 AA5 4 GLU L 190 GLN L 197 -1 O THR L 196 N THR L 144 SHEET 4 AA5 4 THR L 200 ASN L 207 -1 O THR L 200 N GLN L 197 SHEET 1 AA6 4 SER H 2 SER H 6 0 SHEET 2 AA6 4 LEU H 17 SER H 24 -1 O THR H 20 N SER H 6 SHEET 3 AA6 4 THR H 75 MET H 80 -1 O MET H 80 N LEU H 17 SHEET 4 AA6 4 PHE H 66 LYS H 70 -1 N SER H 69 O THR H 77 SHEET 1 AA7 6 PRO H 10 VAL H 11 0 SHEET 2 AA7 6 THR H 106 VAL H 110 1 O THR H 109 N VAL H 11 SHEET 3 AA7 6 ALA H 87 ASP H 95 -1 N TYR H 89 O THR H 106 SHEET 4 AA7 6 TYR H 32 GLN H 38 -1 N VAL H 36 O PHE H 90 SHEET 5 AA7 6 GLU H 45 VAL H 51 -1 O ILE H 50 N MET H 34 SHEET 6 AA7 6 SER H 56 TYR H 58 -1 O TYR H 57 N CYS H 49 SHEET 1 AA8 4 PRO H 10 VAL H 11 0 SHEET 2 AA8 4 THR H 106 VAL H 110 1 O THR H 109 N VAL H 11 SHEET 3 AA8 4 ALA H 87 ASP H 95 -1 N TYR H 89 O THR H 106 SHEET 4 AA8 4 LEU H 99G TRP H 102 -1 O LEU H 101 N ARG H 93 SHEET 1 AA9 4 SER H 119 LEU H 123 0 SHEET 2 AA9 4 THR H 134 TYR H 144 -1 O LEU H 140 N PHE H 121 SHEET 3 AA9 4 TYR H 175 THR H 184 -1 O TYR H 175 N TYR H 144 SHEET 4 AA9 4 VAL H 162 THR H 164 -1 N ARG H 163 O VAL H 180 SHEET 1 AB1 4 SER H 119 LEU H 123 0 SHEET 2 AB1 4 THR H 134 TYR H 144 -1 O LEU H 140 N PHE H 121 SHEET 3 AB1 4 TYR H 175 THR H 184 -1 O TYR H 175 N TYR H 144 SHEET 4 AB1 4 VAL H 168 ARG H 169 -1 N VAL H 168 O SER H 176 SHEET 1 AB2 6 THR H 150 TRP H 153 0 SHEET 2 AB2 6 VAL H 190 HIS H 196 -1 O ASN H 193 N THR H 152 SHEET 3 AB2 6 THR H 201 VAL H 207 -1 O VAL H 203 N VAL H 194 SHEET 4 AB2 6 THR I 201 VAL I 207 -1 O ASP I 204 N LYS H 202 SHEET 5 AB2 6 VAL I 190 HIS I 196 -1 N HIS I 196 O THR I 201 SHEET 6 AB2 6 THR I 150 TRP I 153 -1 N THR I 152 O ASN I 193 SHEET 1 AB3 4 LEU M 4 THR M 7 0 SHEET 2 AB3 4 VAL M 19 ALA M 25 -1 O GLN M 24 N THR M 5 SHEET 3 AB3 4 GLN M 70 ILE M 75 -1 O PHE M 71 N CYS M 23 SHEET 4 AB3 4 PHE M 62 SER M 67 -1 N LYS M 63 O THR M 74 SHEET 1 AB4 6 SER M 10 PRO M 14 0 SHEET 2 AB4 6 THR M 102 LYS M 107 1 O LYS M 107 N GLU M 13 SHEET 3 AB4 6 ALA M 84 ASN M 90 -1 N ALA M 84 O VAL M 104 SHEET 4 AB4 6 LEU M 33 GLN M 38 -1 N TYR M 36 O TYR M 87 SHEET 5 AB4 6 LYS M 45 TYR M 49 -1 O MET M 48 N TRP M 35 SHEET 6 AB4 6 THR M 53 LEU M 54 -1 O THR M 53 N TYR M 49 SHEET 1 AB5 2 TYR M 92 VAL M 93 0 SHEET 2 AB5 2 TYR M 95D ALA M 95E-1 O ALA M 95E N TYR M 92 SHEET 1 AB6 4 THR M 114 PHE M 118 0 SHEET 2 AB6 4 THR M 129 TYR M 139 -1 O ASN M 137 N THR M 114 SHEET 3 AB6 4 TYR M 172 THR M 181 -1 O SER M 176 N CYS M 134 SHEET 4 AB6 4 ILE M 158 LYS M 162 -1 N SER M 161 O SER M 175 SHEET 1 AB7 4 THR M 152 THR M 153 0 SHEET 2 AB7 4 THR M 144 VAL M 149 -1 N VAL M 149 O THR M 152 SHEET 3 AB7 4 GLU M 190 GLN M 197 -1 O LYS M 194 N THR M 146 SHEET 4 AB7 4 THR M 200 ASN M 207 -1 O THR M 200 N GLN M 197 SHEET 1 AB8 4 SER I 2 SER I 6 0 SHEET 2 AB8 4 LEU I 17 SER I 24 -1 O THR I 20 N SER I 6 SHEET 3 AB8 4 THR I 75 MET I 80 -1 O LEU I 78 N LEU I 19 SHEET 4 AB8 4 PHE I 66 SER I 72 -1 N SER I 69 O THR I 77 SHEET 1 AB9 6 GLY I 9 VAL I 11 0 SHEET 2 AB9 6 THR I 106 VAL I 110 1 O THR I 109 N VAL I 11 SHEET 3 AB9 6 ALA I 87 ASP I 95 -1 N TYR I 89 O THR I 106 SHEET 4 AB9 6 TYR I 32 GLN I 38 -1 N VAL I 36 O PHE I 90 SHEET 5 AB9 6 GLU I 45 VAL I 51 -1 O ILE I 50 N MET I 34 SHEET 6 AB9 6 SER I 56 TYR I 58 -1 O TYR I 57 N CYS I 49 SHEET 1 AC1 4 GLY I 9 VAL I 11 0 SHEET 2 AC1 4 THR I 106 VAL I 110 1 O THR I 109 N VAL I 11 SHEET 3 AC1 4 ALA I 87 ASP I 95 -1 N TYR I 89 O THR I 106 SHEET 4 AC1 4 LEU I 99G TRP I 102 -1 O LEU I 101 N ARG I 93 SHEET 1 AC2 4 SER I 119 LEU I 123 0 SHEET 2 AC2 4 THR I 134 TYR I 144 -1 O LEU I 140 N PHE I 121 SHEET 3 AC2 4 TYR I 175 THR I 184 -1 O VAL I 181 N LEU I 137 SHEET 4 AC2 4 VAL I 162 THR I 164 -1 N ARG I 163 O VAL I 180 SHEET 1 AC3 4 SER I 119 LEU I 123 0 SHEET 2 AC3 4 THR I 134 TYR I 144 -1 O LEU I 140 N PHE I 121 SHEET 3 AC3 4 TYR I 175 THR I 184 -1 O VAL I 181 N LEU I 137 SHEET 4 AC3 4 VAL I 168 ARG I 169 -1 N VAL I 168 O SER I 176 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.08 SSBOND 2 CYS L 80 CYS L 170 1555 1555 2.06 SSBOND 3 CYS L 134 CYS L 193 1555 1555 2.02 SSBOND 4 CYS L 211 CYS H 126 1555 1555 2.04 SSBOND 5 CYS H 21 CYS H 91 1555 1555 2.04 SSBOND 6 CYS H 34A CYS H 49 1555 1555 2.02 SSBOND 7 CYS H 139 CYS H 192 1555 1555 2.04 SSBOND 8 CYS M 23 CYS M 88 1555 1555 2.06 SSBOND 9 CYS M 80 CYS M 170 1555 1555 2.03 SSBOND 10 CYS M 134 CYS M 193 1555 1555 2.02 SSBOND 11 CYS M 211 CYS I 126 1555 1555 2.05 SSBOND 12 CYS I 21 CYS I 91 1555 1555 2.05 SSBOND 13 CYS I 34A CYS I 49 1555 1555 2.04 SSBOND 14 CYS I 139 CYS I 192 1555 1555 2.05 CISPEP 1 GLY L 1 PRO L 2 0 4.36 CISPEP 2 THR L 7 PRO L 8 0 1.09 CISPEP 3 PHE L 140 PRO L 141 0 1.97 CISPEP 4 LEU H 145 PRO H 146 0 -14.38 CISPEP 5 GLU H 147 PRO H 148 0 -2.00 CISPEP 6 GLY M 1 PRO M 2 0 4.21 CISPEP 7 THR M 7 PRO M 8 0 -9.31 CISPEP 8 PHE M 140 PRO M 141 0 -0.12 CISPEP 9 LEU I 145 PRO I 146 0 -7.49 CISPEP 10 GLU I 147 PRO I 148 0 -2.49 CRYST1 72.283 84.831 167.237 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013835 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011788 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005980 0.00000