data_5A0B # _entry.id 5A0B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5A0B pdb_00005a0b 10.2210/pdb5a0b/pdb PDBE EBI-63628 ? ? WWPDB D_1290063628 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-08-19 2 'Structure model' 1 1 2017-03-22 3 'Structure model' 1 2 2017-06-28 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2024-11-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_source 2 4 'Structure model' atom_site 3 4 'Structure model' atom_site_anisotrop 4 4 'Structure model' chem_comp 5 4 'Structure model' entity 6 4 'Structure model' pdbx_branch_scheme 7 4 'Structure model' pdbx_chem_comp_identifier 8 4 'Structure model' pdbx_database_status 9 4 'Structure model' pdbx_entity_branch 10 4 'Structure model' pdbx_entity_branch_descriptor 11 4 'Structure model' pdbx_entity_branch_link 12 4 'Structure model' pdbx_entity_branch_list 13 4 'Structure model' pdbx_entity_nonpoly 14 4 'Structure model' pdbx_nonpoly_scheme 15 4 'Structure model' pdbx_struct_assembly_gen 16 4 'Structure model' struct_asym 17 4 'Structure model' struct_conn 18 4 'Structure model' struct_site 19 4 'Structure model' struct_site_gen 20 5 'Structure model' chem_comp 21 5 'Structure model' chem_comp_atom 22 5 'Structure model' chem_comp_bond 23 5 'Structure model' database_2 24 5 'Structure model' pdbx_entry_details 25 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_source.type' 2 4 'Structure model' '_atom_site.B_iso_or_equiv' 3 4 'Structure model' '_atom_site.Cartn_x' 4 4 'Structure model' '_atom_site.Cartn_y' 5 4 'Structure model' '_atom_site.Cartn_z' 6 4 'Structure model' '_atom_site.auth_asym_id' 7 4 'Structure model' '_atom_site.auth_atom_id' 8 4 'Structure model' '_atom_site.auth_comp_id' 9 4 'Structure model' '_atom_site.auth_seq_id' 10 4 'Structure model' '_atom_site.label_asym_id' 11 4 'Structure model' '_atom_site.label_atom_id' 12 4 'Structure model' '_atom_site.label_comp_id' 13 4 'Structure model' '_atom_site.label_entity_id' 14 4 'Structure model' '_atom_site.type_symbol' 15 4 'Structure model' '_atom_site_anisotrop.U[1][1]' 16 4 'Structure model' '_atom_site_anisotrop.U[1][2]' 17 4 'Structure model' '_atom_site_anisotrop.U[1][3]' 18 4 'Structure model' '_atom_site_anisotrop.U[2][2]' 19 4 'Structure model' '_atom_site_anisotrop.U[2][3]' 20 4 'Structure model' '_atom_site_anisotrop.U[3][3]' 21 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 22 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 23 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 24 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 25 4 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 26 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 27 4 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 28 4 'Structure model' '_atom_site_anisotrop.type_symbol' 29 4 'Structure model' '_chem_comp.name' 30 4 'Structure model' '_chem_comp.type' 31 4 'Structure model' '_entity.formula_weight' 32 4 'Structure model' '_entity.pdbx_description' 33 4 'Structure model' '_entity.pdbx_number_of_molecules' 34 4 'Structure model' '_entity.type' 35 4 'Structure model' '_pdbx_database_status.status_code_sf' 36 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 37 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 38 4 'Structure model' '_struct_conn.pdbx_role' 39 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 40 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 41 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 42 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 43 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 44 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 45 5 'Structure model' '_chem_comp.pdbx_synonyms' 46 5 'Structure model' '_database_2.pdbx_DOI' 47 5 'Structure model' '_database_2.pdbx_database_accession' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'AG A 403 HAS LONG BOND BETWEEN C1 AND C4 OF NAG A401' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5A0B _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-04-17 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 5A09 unspecified 'CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL ELASTASE IN COMPLEX WITH A DIHYDROPYRIMIDONE INHIBITOR' PDB 5A0A unspecified 'CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL ELASTASE IN COMPLEX WITH A DIHYDROPYRIMIDONE INHIBITOR' PDB 5A0C unspecified 'CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL ELASTASE IN COMPLEX WITH A DIHYDROPYRIMIDONE INHIBITOR' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'vonNussbaum, F.' 1 'Li, V.M.-J.' 2 'Allerheiligen, S.' 3 'Anlauf, S.' 4 'Baerfacker, L.' 5 'Bechem, M.' 6 'Delbeck, M.' 7 'Fitzgerald, M.F.' 8 'Gerisch, M.' 9 'Gielen-Haertwig, H.' 10 'Haning, H.' 11 'Karthaus, D.' 12 'Lang, D.' 13 'Lustig, K.' 14 'Meibom, D.' 15 'Mittendorf, J.' 16 'Rosentreter, U.' 17 'Schaefer, M.' 18 'Schaefer, S.' 19 'Schamberger, J.' 20 'Telan, L.A.' 21 'Tersteegen, A.' 22 # _citation.id primary _citation.title ;Freezing the Bioactive Conformation to Boost Potency: The Identification of BAY 85-8501, a Selective and Potent Inhibitor of Human Neutrophil Elastase for Pulmonary Diseases. ; _citation.journal_abbrev ChemMedChem _citation.journal_volume 10 _citation.page_first 1163 _citation.page_last 1173 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country DE _citation.journal_id_ISSN 1860-7187 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26083237 _citation.pdbx_database_id_DOI 10.1002/cmdc.201500131 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'von Nussbaum, F.' 1 ? primary 'Li, V.M.' 2 ? primary 'Allerheiligen, S.' 3 ? primary 'Anlauf, S.' 4 ? primary 'Barfacker, L.' 5 ? primary 'Bechem, M.' 6 ? primary 'Delbeck, M.' 7 ? primary 'Fitzgerald, M.F.' 8 ? primary 'Gerisch, M.' 9 ? primary 'Gielen-Haertwig, H.' 10 ? primary 'Haning, H.' 11 ? primary 'Karthaus, D.' 12 ? primary 'Lang, D.' 13 ? primary 'Lustig, K.' 14 ? primary 'Meibom, D.' 15 ? primary 'Mittendorf, J.' 16 ? primary 'Rosentreter, U.' 17 ? primary 'Schafer, M.' 18 ? primary 'Schafer, S.' 19 ? primary 'Schamberger, J.' 20 ? primary 'Telan, L.A.' 21 ? primary 'Tersteegen, A.' 22 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'NEUTROPHIL ELASTASE' 23318.982 1 3.4.21.37 ? ? ? 2 branched man 'alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose' 367.349 2 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 4 non-polymer syn ;(4R)-4-(4-cyanophenyl)-6-methyl-2-oxidanylidene-3-[2-oxidanylidene-2-(4-propan-2-ylpiperazin-1-yl)ethyl]-1-[3-(trifluoromethyl)phenyl]-4H-pyrimidine-5-carbonitrile ; 550.575 1 ? ? ? ? 5 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 6 water nat water 18.015 71 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;BONE MARROW SERINE PROTEASE, ELASTASE-2, HUMAN LEUKOCYTE EL ASTASE, HLE, MEDULLASIN, PMN ELASTASE, ELASTASE, HLE, MEDULIASIN, PMN ELASTASE ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGY DPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVVTSLCRRSNVCTL VRGRQAGVCFGDSGSPLVCNGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSIIQ ; _entity_poly.pdbx_seq_one_letter_code_can ;IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGY DPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVVTSLCRRSNVCTL VRGRQAGVCFGDSGSPLVCNGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSIIQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 ;(4R)-4-(4-cyanophenyl)-6-methyl-2-oxidanylidene-3-[2-oxidanylidene-2-(4-propan-2-ylpiperazin-1-yl)ethyl]-1-[3-(trifluoromethyl)phenyl]-4H-pyrimidine-5-carbonitrile ; JJX 5 'DIMETHYL SULFOXIDE' DMS 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 GLY n 1 4 GLY n 1 5 ARG n 1 6 ARG n 1 7 ALA n 1 8 ARG n 1 9 PRO n 1 10 HIS n 1 11 ALA n 1 12 TRP n 1 13 PRO n 1 14 PHE n 1 15 MET n 1 16 VAL n 1 17 SER n 1 18 LEU n 1 19 GLN n 1 20 LEU n 1 21 ARG n 1 22 GLY n 1 23 GLY n 1 24 HIS n 1 25 PHE n 1 26 CYS n 1 27 GLY n 1 28 ALA n 1 29 THR n 1 30 LEU n 1 31 ILE n 1 32 ALA n 1 33 PRO n 1 34 ASN n 1 35 PHE n 1 36 VAL n 1 37 MET n 1 38 SER n 1 39 ALA n 1 40 ALA n 1 41 HIS n 1 42 CYS n 1 43 VAL n 1 44 ALA n 1 45 ASN n 1 46 VAL n 1 47 ASN n 1 48 VAL n 1 49 ARG n 1 50 ALA n 1 51 VAL n 1 52 ARG n 1 53 VAL n 1 54 VAL n 1 55 LEU n 1 56 GLY n 1 57 ALA n 1 58 HIS n 1 59 ASN n 1 60 LEU n 1 61 SER n 1 62 ARG n 1 63 ARG n 1 64 GLU n 1 65 PRO n 1 66 THR n 1 67 ARG n 1 68 GLN n 1 69 VAL n 1 70 PHE n 1 71 ALA n 1 72 VAL n 1 73 GLN n 1 74 ARG n 1 75 ILE n 1 76 PHE n 1 77 GLU n 1 78 ASN n 1 79 GLY n 1 80 TYR n 1 81 ASP n 1 82 PRO n 1 83 VAL n 1 84 ASN n 1 85 LEU n 1 86 LEU n 1 87 ASN n 1 88 ASP n 1 89 ILE n 1 90 VAL n 1 91 ILE n 1 92 LEU n 1 93 GLN n 1 94 LEU n 1 95 ASN n 1 96 GLY n 1 97 SER n 1 98 ALA n 1 99 THR n 1 100 ILE n 1 101 ASN n 1 102 ALA n 1 103 ASN n 1 104 VAL n 1 105 GLN n 1 106 VAL n 1 107 ALA n 1 108 GLN n 1 109 LEU n 1 110 PRO n 1 111 ALA n 1 112 GLN n 1 113 GLY n 1 114 ARG n 1 115 ARG n 1 116 LEU n 1 117 GLY n 1 118 ASN n 1 119 GLY n 1 120 VAL n 1 121 GLN n 1 122 CYS n 1 123 LEU n 1 124 ALA n 1 125 MET n 1 126 GLY n 1 127 TRP n 1 128 GLY n 1 129 LEU n 1 130 LEU n 1 131 GLY n 1 132 ARG n 1 133 ASN n 1 134 ARG n 1 135 GLY n 1 136 ILE n 1 137 ALA n 1 138 SER n 1 139 VAL n 1 140 LEU n 1 141 GLN n 1 142 GLU n 1 143 LEU n 1 144 ASN n 1 145 VAL n 1 146 THR n 1 147 VAL n 1 148 VAL n 1 149 THR n 1 150 SER n 1 151 LEU n 1 152 CYS n 1 153 ARG n 1 154 ARG n 1 155 SER n 1 156 ASN n 1 157 VAL n 1 158 CYS n 1 159 THR n 1 160 LEU n 1 161 VAL n 1 162 ARG n 1 163 GLY n 1 164 ARG n 1 165 GLN n 1 166 ALA n 1 167 GLY n 1 168 VAL n 1 169 CYS n 1 170 PHE n 1 171 GLY n 1 172 ASP n 1 173 SER n 1 174 GLY n 1 175 SER n 1 176 PRO n 1 177 LEU n 1 178 VAL n 1 179 CYS n 1 180 ASN n 1 181 GLY n 1 182 LEU n 1 183 ILE n 1 184 HIS n 1 185 GLY n 1 186 ILE n 1 187 ALA n 1 188 SER n 1 189 PHE n 1 190 VAL n 1 191 ARG n 1 192 GLY n 1 193 GLY n 1 194 CYS n 1 195 ALA n 1 196 SER n 1 197 GLY n 1 198 LEU n 1 199 TYR n 1 200 PRO n 1 201 ASP n 1 202 ALA n 1 203 PHE n 1 204 ALA n 1 205 PRO n 1 206 VAL n 1 207 ALA n 1 208 GLN n 1 209 PHE n 1 210 VAL n 1 211 ASN n 1 212 TRP n 1 213 ILE n 1 214 ASP n 1 215 SER n 1 216 ILE n 1 217 ILE n 1 218 GLN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name HUMAN _entity_src_nat.pdbx_organism_scientific 'HOMO SAPIENS' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 LFucpa1-6DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2/a6-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 FUC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O6 _pdbx_entity_branch_link.leaving_atom_id_2 HO6 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JJX non-polymer . ;(4R)-4-(4-cyanophenyl)-6-methyl-2-oxidanylidene-3-[2-oxidanylidene-2-(4-propan-2-ylpiperazin-1-yl)ethyl]-1-[3-(trifluoromethyl)phenyl]-4H-pyrimidine-5-carbonitrile ; ? 'C29 H29 F3 N6 O2' 550.575 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 16 16 ILE ILE A . n A 1 2 VAL 2 17 17 VAL VAL A . n A 1 3 GLY 3 18 18 GLY GLY A . n A 1 4 GLY 4 19 19 GLY GLY A . n A 1 5 ARG 5 20 20 ARG ARG A . n A 1 6 ARG 6 21 21 ARG ARG A . n A 1 7 ALA 7 22 22 ALA ALA A . n A 1 8 ARG 8 23 23 ARG ARG A . n A 1 9 PRO 9 24 24 PRO PRO A . n A 1 10 HIS 10 25 25 HIS HIS A . n A 1 11 ALA 11 26 26 ALA ALA A . n A 1 12 TRP 12 27 27 TRP TRP A . n A 1 13 PRO 13 28 28 PRO PRO A . n A 1 14 PHE 14 29 29 PHE PHE A . n A 1 15 MET 15 30 30 MET MET A . n A 1 16 VAL 16 31 31 VAL VAL A . n A 1 17 SER 17 32 32 SER SER A . n A 1 18 LEU 18 33 33 LEU LEU A . n A 1 19 GLN 19 34 34 GLN GLN A . n A 1 20 LEU 20 35 35 LEU LEU A . n A 1 21 ARG 21 36 36 ARG ARG A . n A 1 22 GLY 22 38 38 GLY GLY A . n A 1 23 GLY 23 39 39 GLY GLY A . n A 1 24 HIS 24 40 40 HIS HIS A . n A 1 25 PHE 25 41 41 PHE PHE A . n A 1 26 CYS 26 42 42 CYS CYS A . n A 1 27 GLY 27 43 43 GLY GLY A . n A 1 28 ALA 28 44 44 ALA ALA A . n A 1 29 THR 29 45 45 THR THR A . n A 1 30 LEU 30 46 46 LEU LEU A . n A 1 31 ILE 31 47 47 ILE ILE A . n A 1 32 ALA 32 48 48 ALA ALA A . n A 1 33 PRO 33 49 49 PRO PRO A . n A 1 34 ASN 34 50 50 ASN ASN A . n A 1 35 PHE 35 51 51 PHE PHE A . n A 1 36 VAL 36 52 52 VAL VAL A . n A 1 37 MET 37 53 53 MET MET A . n A 1 38 SER 38 54 54 SER SER A . n A 1 39 ALA 39 55 55 ALA ALA A . n A 1 40 ALA 40 56 56 ALA ALA A . n A 1 41 HIS 41 57 57 HIS HIS A . n A 1 42 CYS 42 58 58 CYS CYS A . n A 1 43 VAL 43 59 59 VAL VAL A . n A 1 44 ALA 44 60 60 ALA ALA A . n A 1 45 ASN 45 61 61 ASN ASN A . n A 1 46 VAL 46 62 62 VAL VAL A . n A 1 47 ASN 47 63 63 ASN ASN A . n A 1 48 VAL 48 63 63 VAL VAL A A n A 1 49 ARG 49 63 63 ARG ARG A B n A 1 50 ALA 50 63 63 ALA ALA A C n A 1 51 VAL 51 64 64 VAL VAL A . n A 1 52 ARG 52 65 65 ARG ARG A . n A 1 53 VAL 53 66 66 VAL VAL A . n A 1 54 VAL 54 67 67 VAL VAL A . n A 1 55 LEU 55 68 68 LEU LEU A . n A 1 56 GLY 56 69 69 GLY GLY A . n A 1 57 ALA 57 70 70 ALA ALA A . n A 1 58 HIS 58 71 71 HIS HIS A . n A 1 59 ASN 59 72 72 ASN ASN A . n A 1 60 LEU 60 73 73 LEU LEU A . n A 1 61 SER 61 74 74 SER SER A . n A 1 62 ARG 62 75 75 ARG ARG A . n A 1 63 ARG 63 76 76 ARG ARG A . n A 1 64 GLU 64 77 77 GLU GLU A . n A 1 65 PRO 65 78 78 PRO PRO A . n A 1 66 THR 66 79 79 THR THR A . n A 1 67 ARG 67 80 80 ARG ARG A . n A 1 68 GLN 68 81 81 GLN GLN A . n A 1 69 VAL 69 82 82 VAL VAL A . n A 1 70 PHE 70 83 83 PHE PHE A . n A 1 71 ALA 71 84 84 ALA ALA A . n A 1 72 VAL 72 85 85 VAL VAL A . n A 1 73 GLN 73 86 86 GLN GLN A . n A 1 74 ARG 74 87 87 ARG ARG A . n A 1 75 ILE 75 88 88 ILE ILE A . n A 1 76 PHE 76 89 89 PHE PHE A . n A 1 77 GLU 77 90 90 GLU GLU A . n A 1 78 ASN 78 92 92 ASN ASN A . n A 1 79 GLY 79 93 93 GLY GLY A . n A 1 80 TYR 80 94 94 TYR TYR A . n A 1 81 ASP 81 95 95 ASP ASP A . n A 1 82 PRO 82 96 96 PRO PRO A . n A 1 83 VAL 83 97 97 VAL VAL A . n A 1 84 ASN 84 98 98 ASN ASN A . n A 1 85 LEU 85 99 99 LEU LEU A . n A 1 86 LEU 86 100 100 LEU LEU A . n A 1 87 ASN 87 101 101 ASN ASN A . n A 1 88 ASP 88 102 102 ASP ASP A . n A 1 89 ILE 89 103 103 ILE ILE A . n A 1 90 VAL 90 104 104 VAL VAL A . n A 1 91 ILE 91 105 105 ILE ILE A . n A 1 92 LEU 92 106 106 LEU LEU A . n A 1 93 GLN 93 107 107 GLN GLN A . n A 1 94 LEU 94 108 108 LEU LEU A . n A 1 95 ASN 95 109 109 ASN ASN A . n A 1 96 GLY 96 110 110 GLY GLY A . n A 1 97 SER 97 111 111 SER SER A . n A 1 98 ALA 98 112 112 ALA ALA A . n A 1 99 THR 99 113 113 THR THR A . n A 1 100 ILE 100 114 114 ILE ILE A . n A 1 101 ASN 101 115 115 ASN ASN A . n A 1 102 ALA 102 116 116 ALA ALA A . n A 1 103 ASN 103 117 117 ASN ASN A . n A 1 104 VAL 104 118 118 VAL VAL A . n A 1 105 GLN 105 119 119 GLN GLN A . n A 1 106 VAL 106 120 120 VAL VAL A . n A 1 107 ALA 107 121 121 ALA ALA A . n A 1 108 GLN 108 122 122 GLN GLN A . n A 1 109 LEU 109 123 123 LEU LEU A . n A 1 110 PRO 110 124 124 PRO PRO A . n A 1 111 ALA 111 125 125 ALA ALA A . n A 1 112 GLN 112 126 126 GLN GLN A . n A 1 113 GLY 113 127 127 GLY GLY A . n A 1 114 ARG 114 128 128 ARG ARG A . n A 1 115 ARG 115 129 129 ARG ARG A . n A 1 116 LEU 116 130 130 LEU LEU A . n A 1 117 GLY 117 131 131 GLY GLY A . n A 1 118 ASN 118 132 132 ASN ASN A . n A 1 119 GLY 119 133 133 GLY GLY A . n A 1 120 VAL 120 134 134 VAL VAL A . n A 1 121 GLN 121 135 135 GLN GLN A . n A 1 122 CYS 122 136 136 CYS CYS A . n A 1 123 LEU 123 137 137 LEU LEU A . n A 1 124 ALA 124 138 138 ALA ALA A . n A 1 125 MET 125 139 139 MET MET A . n A 1 126 GLY 126 140 140 GLY GLY A . n A 1 127 TRP 127 141 141 TRP TRP A . n A 1 128 GLY 128 142 142 GLY GLY A . n A 1 129 LEU 129 143 143 LEU LEU A . n A 1 130 LEU 130 144 144 LEU LEU A . n A 1 131 GLY 131 145 145 GLY GLY A . n A 1 132 ARG 132 146 ? ? ? A . n A 1 133 ASN 133 147 ? ? ? A . n A 1 134 ARG 134 148 ? ? ? A . n A 1 135 GLY 135 150 150 GLY GLY A . n A 1 136 ILE 136 151 151 ILE ILE A . n A 1 137 ALA 137 152 152 ALA ALA A . n A 1 138 SER 138 153 153 SER SER A . n A 1 139 VAL 139 154 154 VAL VAL A . n A 1 140 LEU 140 155 155 LEU LEU A . n A 1 141 GLN 141 156 156 GLN GLN A . n A 1 142 GLU 142 157 157 GLU GLU A . n A 1 143 LEU 143 158 158 LEU LEU A . n A 1 144 ASN 144 159 159 ASN ASN A . n A 1 145 VAL 145 160 160 VAL VAL A . n A 1 146 THR 146 161 161 THR THR A . n A 1 147 VAL 147 162 162 VAL VAL A . n A 1 148 VAL 148 163 163 VAL VAL A . n A 1 149 THR 149 164 164 THR THR A . n A 1 150 SER 150 165 165 SER SER A . n A 1 151 LEU 151 166 166 LEU LEU A . n A 1 152 CYS 152 168 168 CYS CYS A . n A 1 153 ARG 153 177 177 ARG ARG A . n A 1 154 ARG 154 178 178 ARG ARG A . n A 1 155 SER 155 179 179 SER SER A . n A 1 156 ASN 156 180 180 ASN ASN A . n A 1 157 VAL 157 181 181 VAL VAL A . n A 1 158 CYS 158 182 182 CYS CYS A . n A 1 159 THR 159 183 183 THR THR A . n A 1 160 LEU 160 184 184 LEU LEU A . n A 1 161 VAL 161 185 185 VAL VAL A . n A 1 162 ARG 162 186 186 ARG ARG A . n A 1 163 GLY 163 186 186 GLY GLY A A n A 1 164 ARG 164 186 186 ARG ARG A B n A 1 165 GLN 165 187 187 GLN GLN A . n A 1 166 ALA 166 188 188 ALA ALA A . n A 1 167 GLY 167 189 189 GLY GLY A . n A 1 168 VAL 168 190 190 VAL VAL A . n A 1 169 CYS 169 191 191 CYS CYS A . n A 1 170 PHE 170 192 192 PHE PHE A . n A 1 171 GLY 171 193 193 GLY GLY A . n A 1 172 ASP 172 194 194 ASP ASP A . n A 1 173 SER 173 195 195 SER SER A . n A 1 174 GLY 174 196 196 GLY GLY A . n A 1 175 SER 175 197 197 SER SER A . n A 1 176 PRO 176 198 198 PRO PRO A . n A 1 177 LEU 177 199 199 LEU LEU A . n A 1 178 VAL 178 200 200 VAL VAL A . n A 1 179 CYS 179 201 201 CYS CYS A . n A 1 180 ASN 180 202 202 ASN ASN A . n A 1 181 GLY 181 207 207 GLY GLY A . n A 1 182 LEU 182 208 208 LEU LEU A . n A 1 183 ILE 183 209 209 ILE ILE A . n A 1 184 HIS 184 210 210 HIS HIS A . n A 1 185 GLY 185 211 211 GLY GLY A . n A 1 186 ILE 186 212 212 ILE ILE A . n A 1 187 ALA 187 213 213 ALA ALA A . n A 1 188 SER 188 214 214 SER SER A . n A 1 189 PHE 189 215 215 PHE PHE A . n A 1 190 VAL 190 216 216 VAL VAL A . n A 1 191 ARG 191 217 217 ARG ARG A . n A 1 192 GLY 192 218 218 GLY GLY A . n A 1 193 GLY 193 219 219 GLY GLY A . n A 1 194 CYS 194 220 220 CYS CYS A . n A 1 195 ALA 195 220 220 ALA ALA A A n A 1 196 SER 196 221 221 SER SER A . n A 1 197 GLY 197 222 222 GLY GLY A . n A 1 198 LEU 198 223 223 LEU LEU A . n A 1 199 TYR 199 224 224 TYR TYR A . n A 1 200 PRO 200 225 225 PRO PRO A . n A 1 201 ASP 201 226 226 ASP ASP A . n A 1 202 ALA 202 227 227 ALA ALA A . n A 1 203 PHE 203 228 228 PHE PHE A . n A 1 204 ALA 204 229 229 ALA ALA A . n A 1 205 PRO 205 230 230 PRO PRO A . n A 1 206 VAL 206 231 231 VAL VAL A . n A 1 207 ALA 207 232 232 ALA ALA A . n A 1 208 GLN 208 233 233 GLN GLN A . n A 1 209 PHE 209 234 234 PHE PHE A . n A 1 210 VAL 210 235 235 VAL VAL A . n A 1 211 ASN 211 236 236 ASN ASN A . n A 1 212 TRP 212 237 237 TRP TRP A . n A 1 213 ILE 213 238 238 ILE ILE A . n A 1 214 ASP 214 239 239 ASP ASP A . n A 1 215 SER 215 240 240 SER SER A . n A 1 216 ILE 216 241 241 ILE ILE A . n A 1 217 ILE 217 242 242 ILE ILE A . n A 1 218 GLN 218 243 243 GLN GLN A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 401 n B 2 FUC 2 B FUC 2 A FUC 402 n C 2 NAG 1 C NAG 1 A NAG 411 n C 2 FUC 2 C FUC 2 A FUC 412 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NAG 1 403 403 NAG NAG A . E 4 JJX 1 1001 1001 JJX JJX A . F 5 DMS 1 1002 1002 DMS DMS A . G 6 HOH 1 2001 2001 HOH HOH A . G 6 HOH 2 2002 2002 HOH HOH A . G 6 HOH 3 2003 2003 HOH HOH A . G 6 HOH 4 2004 2004 HOH HOH A . G 6 HOH 5 2005 2005 HOH HOH A . G 6 HOH 6 2006 2006 HOH HOH A . G 6 HOH 7 2007 2007 HOH HOH A . G 6 HOH 8 2008 2008 HOH HOH A . G 6 HOH 9 2009 2009 HOH HOH A . G 6 HOH 10 2010 2010 HOH HOH A . G 6 HOH 11 2011 2011 HOH HOH A . G 6 HOH 12 2012 2012 HOH HOH A . G 6 HOH 13 2013 2013 HOH HOH A . G 6 HOH 14 2014 2014 HOH HOH A . G 6 HOH 15 2015 2015 HOH HOH A . G 6 HOH 16 2016 2016 HOH HOH A . G 6 HOH 17 2017 2017 HOH HOH A . G 6 HOH 18 2018 2018 HOH HOH A . G 6 HOH 19 2019 2019 HOH HOH A . G 6 HOH 20 2020 2020 HOH HOH A . G 6 HOH 21 2021 2021 HOH HOH A . G 6 HOH 22 2022 2022 HOH HOH A . G 6 HOH 23 2023 2023 HOH HOH A . G 6 HOH 24 2024 2024 HOH HOH A . G 6 HOH 25 2025 2025 HOH HOH A . G 6 HOH 26 2026 2026 HOH HOH A . G 6 HOH 27 2027 2027 HOH HOH A . G 6 HOH 28 2028 2028 HOH HOH A . G 6 HOH 29 2029 2029 HOH HOH A . G 6 HOH 30 2030 2030 HOH HOH A . G 6 HOH 31 2031 2031 HOH HOH A . G 6 HOH 32 2032 2032 HOH HOH A . G 6 HOH 33 2033 2033 HOH HOH A . G 6 HOH 34 2034 2034 HOH HOH A . G 6 HOH 35 2035 2035 HOH HOH A . G 6 HOH 36 2036 2036 HOH HOH A . G 6 HOH 37 2037 2037 HOH HOH A . G 6 HOH 38 2038 2038 HOH HOH A . G 6 HOH 39 2039 2039 HOH HOH A . G 6 HOH 40 2040 2040 HOH HOH A . G 6 HOH 41 2041 2041 HOH HOH A . G 6 HOH 42 2042 2042 HOH HOH A . G 6 HOH 43 2043 2043 HOH HOH A . G 6 HOH 44 2044 2044 HOH HOH A . G 6 HOH 45 2045 2045 HOH HOH A . G 6 HOH 46 2046 2046 HOH HOH A . G 6 HOH 47 2047 2047 HOH HOH A . G 6 HOH 48 2048 2048 HOH HOH A . G 6 HOH 49 2049 2049 HOH HOH A . G 6 HOH 50 2050 2050 HOH HOH A . G 6 HOH 51 2051 2051 HOH HOH A . G 6 HOH 52 2052 2052 HOH HOH A . G 6 HOH 53 2053 2053 HOH HOH A . G 6 HOH 54 2054 2054 HOH HOH A . G 6 HOH 55 2055 2055 HOH HOH A . G 6 HOH 56 2056 2056 HOH HOH A . G 6 HOH 57 2057 2057 HOH HOH A . G 6 HOH 58 2058 2058 HOH HOH A . G 6 HOH 59 2059 2059 HOH HOH A . G 6 HOH 60 2060 2060 HOH HOH A . G 6 HOH 61 2061 2061 HOH HOH A . G 6 HOH 62 2062 2062 HOH HOH A . G 6 HOH 63 2063 2063 HOH HOH A . G 6 HOH 64 2064 2064 HOH HOH A . G 6 HOH 65 2065 2065 HOH HOH A . G 6 HOH 66 2066 2066 HOH HOH A . G 6 HOH 67 2067 2067 HOH HOH A . G 6 HOH 68 2068 2068 HOH HOH A . G 6 HOH 69 2069 2069 HOH HOH A . G 6 HOH 70 2070 2070 HOH HOH A . G 6 HOH 71 2071 2071 HOH HOH A . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id NAG _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 403 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O1 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id D _pdbx_unobs_or_zero_occ_atoms.label_comp_id NAG _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O1 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 5A0B _cell.length_a 77.459 _cell.length_b 77.459 _cell.length_c 149.625 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5A0B _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 # _exptl.entry_id 5A0B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.84 _exptl_crystal.density_percent_sol 56.65 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '15% PEG6000, 0.2M AMMONIUM CITRATE' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR MAR IP' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5A0B _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 61.19 _reflns.d_resolution_high 2.21 _reflns.number_obs 27533 _reflns.number_all ? _reflns.percent_possible_obs 92.7 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.80 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.21 _reflns_shell.d_res_low 2.33 _reflns_shell.percent_possible_all 80.2 _reflns_shell.Rmerge_I_obs 0.18 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.50 _reflns_shell.pdbx_redundancy 2.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5A0B _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12858 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.94 _refine.ls_d_res_high 2.23 _refine.ls_percent_reflns_obs 99.14 _refine.ls_R_factor_obs 0.17495 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17271 _refine.ls_R_factor_R_free 0.21816 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 668 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.940 _refine.correlation_coeff_Fo_to_Fc_free 0.915 _refine.B_iso_mean 24.272 _refine.aniso_B[1][1] -1.05 _refine.aniso_B[2][2] -1.05 _refine.aniso_B[3][3] 1.57 _refine.aniso_B[1][2] -0.52 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.219 _refine.pdbx_overall_ESU_R_Free 0.185 _refine.overall_SU_ML 0.117 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 10.089 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1606 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 106 _refine_hist.number_atoms_solvent 71 _refine_hist.number_atoms_total 1783 _refine_hist.d_res_high 2.23 _refine_hist.d_res_low 49.94 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.023 0.022 ? 1746 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.914 2.009 ? 2377 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.512 5.000 ? 208 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.508 22.535 ? 71 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.938 15.000 ? 248 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.667 15.000 ? 17 'X-RAY DIFFRACTION' ? r_chiral_restr 0.137 0.200 ? 284 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.021 ? 1296 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.038 1.500 ? 1055 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.812 2.000 ? 1681 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.891 3.000 ? 691 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.488 4.500 ? 696 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.229 _refine_ls_shell.d_res_low 2.287 _refine_ls_shell.number_reflns_R_work 865 _refine_ls_shell.R_factor_R_work 0.190 _refine_ls_shell.percent_reflns_obs 92.01 _refine_ls_shell.R_factor_R_free 0.285 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 5A0B _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 5A0B _struct.title 'Crystal Structure of human neutrophil elastase in complex with a dihydropyrimidone inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5A0B _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'TRYPSIN FAMILY FOLD, PROTEASE, HYDROLASE, HYDROLASE- INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ELNE_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P08246 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5A0B _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 218 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P08246 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 16 _struct_ref_seq.pdbx_auth_seq_align_end 243 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 39 ? ALA A 44 ? ALA A 55 ALA A 60 1 ? 6 HELX_P HELX_P2 2 ASN A 47 ? ALA A 50 C ASN A 63 ALA A 63 5 ? 4 HELX_P HELX_P3 3 PHE A 209 ? GLN A 218 ? PHE A 234 GLN A 243 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 42 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf2 disulf ? ? A CYS 122 SG ? ? ? 1_555 A CYS 179 SG ? ? A CYS 136 A CYS 201 1_555 ? ? ? ? ? ? ? 1.990 ? ? disulf3 disulf ? ? A CYS 152 SG ? ? ? 1_555 A CYS 158 SG ? ? A CYS 168 A CYS 182 1_555 ? ? ? ? ? ? ? 2.064 ? ? disulf4 disulf ? ? A CYS 169 SG ? ? ? 1_555 A CYS 194 SG ? ? A CYS 191 A CYS 220 1_555 ? ? ? ? ? ? ? 2.134 ? ? covale1 covale one ? A ASN 95 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 109 C NAG 1 1_555 ? ? ? ? ? ? ? 1.457 ? N-Glycosylation covale2 covale one ? A ASN 144 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 159 B NAG 1 1_555 ? ? ? ? ? ? ? 1.430 ? N-Glycosylation covale3 covale both ? B NAG . O6 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 2 1_555 ? ? ? ? ? ? ? 1.462 ? ? covale4 covale both ? C NAG . O6 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 2 1_555 ? ? ? ? ? ? ? 1.472 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 144 ? NAG B 1 ? 1_555 ASN A 159 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG C . ? ASN A 95 ? NAG C 1 ? 1_555 ASN A 109 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 CYS A 26 ? CYS A 42 ? CYS A 42 ? 1_555 CYS A 58 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 122 ? CYS A 179 ? CYS A 136 ? 1_555 CYS A 201 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 152 ? CYS A 158 ? CYS A 168 ? 1_555 CYS A 182 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 169 ? CYS A 194 ? CYS A 191 ? 1_555 CYS A 220 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 8 ? AB ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AB 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ARG A 5 ? ARG A 6 ? ARG A 20 ARG A 21 AA 2 GLN A 141 ? VAL A 148 ? GLN A 156 VAL A 163 AA 3 VAL A 157 ? LEU A 160 ? VAL A 181 LEU A 184 AA 4 ASP A 201 ? PRO A 205 ? ASP A 226 PRO A 230 AA 5 LEU A 182 ? PHE A 189 ? LEU A 208 PHE A 215 AA 6 PRO A 176 ? CYS A 179 ? PRO A 198 CYS A 201 AA 7 GLN A 121 ? GLY A 126 ? GLN A 135 GLY A 140 AA 8 ARG A 5 ? ARG A 6 ? ARG A 20 ARG A 21 AB 1 MET A 15 ? LEU A 20 ? MET A 30 LEU A 35 AB 2 GLY A 23 ? ALA A 32 ? GLY A 39 ALA A 48 AB 3 PHE A 35 ? SER A 38 ? PHE A 51 SER A 54 AB 4 VAL A 90 ? LEU A 94 ? VAL A 104 LEU A 108 AB 5 GLN A 68 ? PHE A 76 ? GLN A 81 PHE A 89 AB 6 ARG A 52 ? LEU A 55 ? ARG A 65 LEU A 68 AB 7 MET A 15 ? LEU A 20 ? MET A 30 LEU A 35 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ARG A 5 ? N ARG A 20 O GLU A 142 ? O GLU A 157 AA 2 3 N VAL A 148 ? N VAL A 163 O CYS A 158 ? O CYS A 182 AA 3 4 N THR A 159 ? N THR A 183 O ASP A 201 ? O ASP A 226 AA 4 5 N ALA A 204 ? N ALA A 229 O ILE A 186 ? O ILE A 212 AA 5 6 N HIS A 184 ? N HIS A 210 O LEU A 177 ? O LEU A 199 AA 6 7 N VAL A 178 ? N VAL A 200 O LEU A 123 ? O LEU A 137 AB 1 2 N LEU A 20 ? N LEU A 35 O GLY A 23 ? O GLY A 39 AB 2 3 N ILE A 31 ? N ILE A 47 O PHE A 35 ? O PHE A 51 AB 3 4 N SER A 38 ? N SER A 54 O VAL A 90 ? O VAL A 104 AB 4 5 O GLN A 93 ? O GLN A 107 N GLN A 73 ? N GLN A 86 AB 5 6 N PHE A 70 ? N PHE A 83 O VAL A 53 ? O VAL A 66 AB 6 7 N VAL A 54 ? N VAL A 67 O SER A 17 ? O SER A 32 # _pdbx_entry_details.entry_id 5A0B _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 2018 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2053 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.82 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A LEU 166 ? ? N A CYS 168 ? ? 1.574 1.336 0.238 0.023 Y 2 1 C A CYS 168 ? ? N A ARG 177 ? ? 1.545 1.336 0.209 0.023 Y 3 1 C A ASN 202 ? ? N A GLY 207 ? ? 1.640 1.336 0.304 0.023 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A MET 53 ? ? SD A MET 53 ? ? CE A MET 53 ? ? 88.83 100.20 -11.37 1.60 N 2 1 O A GLU 90 ? ? C A GLU 90 ? ? N A ASN 92 ? ? 111.61 122.70 -11.09 1.60 Y 3 1 CA A ASN 202 ? ? C A ASN 202 ? ? N A GLY 207 ? ? 130.67 116.20 14.47 2.00 Y 4 1 O A ASN 202 ? ? C A ASN 202 ? ? N A GLY 207 ? ? 107.03 123.20 -16.17 1.70 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 71 ? ? -130.16 -69.11 2 1 LEU A 223 ? ? -131.10 -56.00 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 GLU A 90 ? ? 21.68 2 1 LEU A 166 ? ? 11.33 3 1 CYS A 168 ? ? 18.27 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C A ARG 36 ? ? N A GLY 38 ? ? 1.80 2 1 C A ASN 202 ? ? N A GLY 207 ? ? 1.64 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 95 A ASN 109 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 144 A ASN 159 ? ASN 'GLYCOSYLATION SITE' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -17.7896 _pdbx_refine_tls.origin_y -13.6691 _pdbx_refine_tls.origin_z 19.2987 _pdbx_refine_tls.T[1][1] 0.0139 _pdbx_refine_tls.T[2][2] 0.0213 _pdbx_refine_tls.T[3][3] 0.0018 _pdbx_refine_tls.T[1][2] -0.0077 _pdbx_refine_tls.T[1][3] 0.0006 _pdbx_refine_tls.T[2][3] 0.0046 _pdbx_refine_tls.L[1][1] 0.8106 _pdbx_refine_tls.L[2][2] 0.2472 _pdbx_refine_tls.L[3][3] 0.2500 _pdbx_refine_tls.L[1][2] 0.1226 _pdbx_refine_tls.L[1][3] -0.0590 _pdbx_refine_tls.L[2][3] 0.0534 _pdbx_refine_tls.S[1][1] -0.0006 _pdbx_refine_tls.S[1][2] 0.0176 _pdbx_refine_tls.S[1][3] 0.0158 _pdbx_refine_tls.S[2][1] 0.0082 _pdbx_refine_tls.S[2][2] -0.0083 _pdbx_refine_tls.S[2][3] 0.0058 _pdbx_refine_tls.S[3][1] -0.0004 _pdbx_refine_tls.S[3][2] 0.0304 _pdbx_refine_tls.S[3][3] 0.0089 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 16 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 243 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. THE SHEETS PRESENTED AS "AB" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 146 ? A ARG 132 2 1 Y 1 A ASN 147 ? A ASN 133 3 1 Y 1 A ARG 148 ? A ARG 134 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DMS S S N N 88 DMS O O N N 89 DMS C1 C N N 90 DMS C2 C N N 91 DMS H11 H N N 92 DMS H12 H N N 93 DMS H13 H N N 94 DMS H21 H N N 95 DMS H22 H N N 96 DMS H23 H N N 97 FUC C1 C N R 98 FUC C2 C N S 99 FUC C3 C N R 100 FUC C4 C N S 101 FUC C5 C N S 102 FUC C6 C N N 103 FUC O1 O N N 104 FUC O2 O N N 105 FUC O3 O N N 106 FUC O4 O N N 107 FUC O5 O N N 108 FUC H1 H N N 109 FUC H2 H N N 110 FUC H3 H N N 111 FUC H4 H N N 112 FUC H5 H N N 113 FUC H61 H N N 114 FUC H62 H N N 115 FUC H63 H N N 116 FUC HO1 H N N 117 FUC HO2 H N N 118 FUC HO3 H N N 119 FUC HO4 H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 JJX C33 C N N 216 JJX C34 C N N 217 JJX N35 N N N 218 JJX C38 C N N 219 JJX C40 C N N 220 JJX C39 C N N 221 JJX C36 C N N 222 JJX C37 C N N 223 JJX N31 N N N 224 JJX C30 C N N 225 JJX O32 O N N 226 JJX C29 C N N 227 JJX N12 N N N 228 JJX C11 C N N 229 JJX O21 O N N 230 JJX C7 C N R 231 JJX C3 C Y N 232 JJX C2 C Y N 233 JJX C1 C Y N 234 JJX C6 C Y N 235 JJX C19 C N N 236 JJX N20 N N N 237 JJX C5 C Y N 238 JJX C4 C Y N 239 JJX C8 C N N 240 JJX C27 C N N 241 JJX N28 N N N 242 JJX C9 C N N 243 JJX C22 C N N 244 JJX N10 N N N 245 JJX C13 C Y N 246 JJX C18 C Y N 247 JJX C14 C Y N 248 JJX C15 C Y N 249 JJX C16 C Y N 250 JJX C17 C Y N 251 JJX C23 C N N 252 JJX F25 F N N 253 JJX F26 F N N 254 JJX F24 F N N 255 JJX H331 H N N 256 JJX H332 H N N 257 JJX H341 H N N 258 JJX H342 H N N 259 JJX H38 H N N 260 JJX H361 H N N 261 JJX H362 H N N 262 JJX H401 H N N 263 JJX H402 H N N 264 JJX H403 H N N 265 JJX H391 H N N 266 JJX H392 H N N 267 JJX H393 H N N 268 JJX H371 H N N 269 JJX H372 H N N 270 JJX H291 H N N 271 JJX H292 H N N 272 JJX H7 H N N 273 JJX H2 H N N 274 JJX H4 H N N 275 JJX H1 H N N 276 JJX H5 H N N 277 JJX H221 H N N 278 JJX H222 H N N 279 JJX H223 H N N 280 JJX H18 H N N 281 JJX H14 H N N 282 JJX H15 H N N 283 JJX H16 H N N 284 LEU N N N N 285 LEU CA C N S 286 LEU C C N N 287 LEU O O N N 288 LEU CB C N N 289 LEU CG C N N 290 LEU CD1 C N N 291 LEU CD2 C N N 292 LEU OXT O N N 293 LEU H H N N 294 LEU H2 H N N 295 LEU HA H N N 296 LEU HB2 H N N 297 LEU HB3 H N N 298 LEU HG H N N 299 LEU HD11 H N N 300 LEU HD12 H N N 301 LEU HD13 H N N 302 LEU HD21 H N N 303 LEU HD22 H N N 304 LEU HD23 H N N 305 LEU HXT H N N 306 MET N N N N 307 MET CA C N S 308 MET C C N N 309 MET O O N N 310 MET CB C N N 311 MET CG C N N 312 MET SD S N N 313 MET CE C N N 314 MET OXT O N N 315 MET H H N N 316 MET H2 H N N 317 MET HA H N N 318 MET HB2 H N N 319 MET HB3 H N N 320 MET HG2 H N N 321 MET HG3 H N N 322 MET HE1 H N N 323 MET HE2 H N N 324 MET HE3 H N N 325 MET HXT H N N 326 NAG C1 C N R 327 NAG C2 C N R 328 NAG C3 C N R 329 NAG C4 C N S 330 NAG C5 C N R 331 NAG C6 C N N 332 NAG C7 C N N 333 NAG C8 C N N 334 NAG N2 N N N 335 NAG O1 O N N 336 NAG O3 O N N 337 NAG O4 O N N 338 NAG O5 O N N 339 NAG O6 O N N 340 NAG O7 O N N 341 NAG H1 H N N 342 NAG H2 H N N 343 NAG H3 H N N 344 NAG H4 H N N 345 NAG H5 H N N 346 NAG H61 H N N 347 NAG H62 H N N 348 NAG H81 H N N 349 NAG H82 H N N 350 NAG H83 H N N 351 NAG HN2 H N N 352 NAG HO1 H N N 353 NAG HO3 H N N 354 NAG HO4 H N N 355 NAG HO6 H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 VAL N N N N 479 VAL CA C N S 480 VAL C C N N 481 VAL O O N N 482 VAL CB C N N 483 VAL CG1 C N N 484 VAL CG2 C N N 485 VAL OXT O N N 486 VAL H H N N 487 VAL H2 H N N 488 VAL HA H N N 489 VAL HB H N N 490 VAL HG11 H N N 491 VAL HG12 H N N 492 VAL HG13 H N N 493 VAL HG21 H N N 494 VAL HG22 H N N 495 VAL HG23 H N N 496 VAL HXT H N N 497 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DMS S O doub N N 83 DMS S C1 sing N N 84 DMS S C2 sing N N 85 DMS C1 H11 sing N N 86 DMS C1 H12 sing N N 87 DMS C1 H13 sing N N 88 DMS C2 H21 sing N N 89 DMS C2 H22 sing N N 90 DMS C2 H23 sing N N 91 FUC C1 C2 sing N N 92 FUC C1 O1 sing N N 93 FUC C1 O5 sing N N 94 FUC C1 H1 sing N N 95 FUC C2 C3 sing N N 96 FUC C2 O2 sing N N 97 FUC C2 H2 sing N N 98 FUC C3 C4 sing N N 99 FUC C3 O3 sing N N 100 FUC C3 H3 sing N N 101 FUC C4 C5 sing N N 102 FUC C4 O4 sing N N 103 FUC C4 H4 sing N N 104 FUC C5 C6 sing N N 105 FUC C5 O5 sing N N 106 FUC C5 H5 sing N N 107 FUC C6 H61 sing N N 108 FUC C6 H62 sing N N 109 FUC C6 H63 sing N N 110 FUC O1 HO1 sing N N 111 FUC O2 HO2 sing N N 112 FUC O3 HO3 sing N N 113 FUC O4 HO4 sing N N 114 GLN N CA sing N N 115 GLN N H sing N N 116 GLN N H2 sing N N 117 GLN CA C sing N N 118 GLN CA CB sing N N 119 GLN CA HA sing N N 120 GLN C O doub N N 121 GLN C OXT sing N N 122 GLN CB CG sing N N 123 GLN CB HB2 sing N N 124 GLN CB HB3 sing N N 125 GLN CG CD sing N N 126 GLN CG HG2 sing N N 127 GLN CG HG3 sing N N 128 GLN CD OE1 doub N N 129 GLN CD NE2 sing N N 130 GLN NE2 HE21 sing N N 131 GLN NE2 HE22 sing N N 132 GLN OXT HXT sing N N 133 GLU N CA sing N N 134 GLU N H sing N N 135 GLU N H2 sing N N 136 GLU CA C sing N N 137 GLU CA CB sing N N 138 GLU CA HA sing N N 139 GLU C O doub N N 140 GLU C OXT sing N N 141 GLU CB CG sing N N 142 GLU CB HB2 sing N N 143 GLU CB HB3 sing N N 144 GLU CG CD sing N N 145 GLU CG HG2 sing N N 146 GLU CG HG3 sing N N 147 GLU CD OE1 doub N N 148 GLU CD OE2 sing N N 149 GLU OE2 HE2 sing N N 150 GLU OXT HXT sing N N 151 GLY N CA sing N N 152 GLY N H sing N N 153 GLY N H2 sing N N 154 GLY CA C sing N N 155 GLY CA HA2 sing N N 156 GLY CA HA3 sing N N 157 GLY C O doub N N 158 GLY C OXT sing N N 159 GLY OXT HXT sing N N 160 HIS N CA sing N N 161 HIS N H sing N N 162 HIS N H2 sing N N 163 HIS CA C sing N N 164 HIS CA CB sing N N 165 HIS CA HA sing N N 166 HIS C O doub N N 167 HIS C OXT sing N N 168 HIS CB CG sing N N 169 HIS CB HB2 sing N N 170 HIS CB HB3 sing N N 171 HIS CG ND1 sing Y N 172 HIS CG CD2 doub Y N 173 HIS ND1 CE1 doub Y N 174 HIS ND1 HD1 sing N N 175 HIS CD2 NE2 sing Y N 176 HIS CD2 HD2 sing N N 177 HIS CE1 NE2 sing Y N 178 HIS CE1 HE1 sing N N 179 HIS NE2 HE2 sing N N 180 HIS OXT HXT sing N N 181 HOH O H1 sing N N 182 HOH O H2 sing N N 183 ILE N CA sing N N 184 ILE N H sing N N 185 ILE N H2 sing N N 186 ILE CA C sing N N 187 ILE CA CB sing N N 188 ILE CA HA sing N N 189 ILE C O doub N N 190 ILE C OXT sing N N 191 ILE CB CG1 sing N N 192 ILE CB CG2 sing N N 193 ILE CB HB sing N N 194 ILE CG1 CD1 sing N N 195 ILE CG1 HG12 sing N N 196 ILE CG1 HG13 sing N N 197 ILE CG2 HG21 sing N N 198 ILE CG2 HG22 sing N N 199 ILE CG2 HG23 sing N N 200 ILE CD1 HD11 sing N N 201 ILE CD1 HD12 sing N N 202 ILE CD1 HD13 sing N N 203 ILE OXT HXT sing N N 204 JJX C33 C34 sing N N 205 JJX C33 N31 sing N N 206 JJX C34 N35 sing N N 207 JJX N35 C38 sing N N 208 JJX N35 C36 sing N N 209 JJX C38 C40 sing N N 210 JJX C38 C39 sing N N 211 JJX C36 C37 sing N N 212 JJX C37 N31 sing N N 213 JJX N31 C30 sing N N 214 JJX C30 O32 doub N N 215 JJX C30 C29 sing N N 216 JJX C29 N12 sing N N 217 JJX N12 C11 sing N N 218 JJX N12 C7 sing N N 219 JJX C11 O21 doub N N 220 JJX C11 N10 sing N N 221 JJX C7 C3 sing N N 222 JJX C7 C8 sing N N 223 JJX C3 C2 sing Y N 224 JJX C3 C4 doub Y N 225 JJX C2 C1 doub Y N 226 JJX C1 C6 sing Y N 227 JJX C6 C19 sing N N 228 JJX C6 C5 doub Y N 229 JJX C19 N20 trip N N 230 JJX C5 C4 sing Y N 231 JJX C8 C27 sing N N 232 JJX C8 C9 doub N N 233 JJX C27 N28 trip N N 234 JJX C9 C22 sing N N 235 JJX C9 N10 sing N N 236 JJX N10 C13 sing N N 237 JJX C13 C18 sing Y N 238 JJX C13 C14 doub Y N 239 JJX C18 C17 doub Y N 240 JJX C14 C15 sing Y N 241 JJX C15 C16 doub Y N 242 JJX C16 C17 sing Y N 243 JJX C17 C23 sing N N 244 JJX C23 F25 sing N N 245 JJX C23 F26 sing N N 246 JJX C23 F24 sing N N 247 JJX C33 H331 sing N N 248 JJX C33 H332 sing N N 249 JJX C34 H341 sing N N 250 JJX C34 H342 sing N N 251 JJX C38 H38 sing N N 252 JJX C36 H361 sing N N 253 JJX C36 H362 sing N N 254 JJX C40 H401 sing N N 255 JJX C40 H402 sing N N 256 JJX C40 H403 sing N N 257 JJX C39 H391 sing N N 258 JJX C39 H392 sing N N 259 JJX C39 H393 sing N N 260 JJX C37 H371 sing N N 261 JJX C37 H372 sing N N 262 JJX C29 H291 sing N N 263 JJX C29 H292 sing N N 264 JJX C7 H7 sing N N 265 JJX C2 H2 sing N N 266 JJX C4 H4 sing N N 267 JJX C1 H1 sing N N 268 JJX C5 H5 sing N N 269 JJX C22 H221 sing N N 270 JJX C22 H222 sing N N 271 JJX C22 H223 sing N N 272 JJX C18 H18 sing N N 273 JJX C14 H14 sing N N 274 JJX C15 H15 sing N N 275 JJX C16 H16 sing N N 276 LEU N CA sing N N 277 LEU N H sing N N 278 LEU N H2 sing N N 279 LEU CA C sing N N 280 LEU CA CB sing N N 281 LEU CA HA sing N N 282 LEU C O doub N N 283 LEU C OXT sing N N 284 LEU CB CG sing N N 285 LEU CB HB2 sing N N 286 LEU CB HB3 sing N N 287 LEU CG CD1 sing N N 288 LEU CG CD2 sing N N 289 LEU CG HG sing N N 290 LEU CD1 HD11 sing N N 291 LEU CD1 HD12 sing N N 292 LEU CD1 HD13 sing N N 293 LEU CD2 HD21 sing N N 294 LEU CD2 HD22 sing N N 295 LEU CD2 HD23 sing N N 296 LEU OXT HXT sing N N 297 MET N CA sing N N 298 MET N H sing N N 299 MET N H2 sing N N 300 MET CA C sing N N 301 MET CA CB sing N N 302 MET CA HA sing N N 303 MET C O doub N N 304 MET C OXT sing N N 305 MET CB CG sing N N 306 MET CB HB2 sing N N 307 MET CB HB3 sing N N 308 MET CG SD sing N N 309 MET CG HG2 sing N N 310 MET CG HG3 sing N N 311 MET SD CE sing N N 312 MET CE HE1 sing N N 313 MET CE HE2 sing N N 314 MET CE HE3 sing N N 315 MET OXT HXT sing N N 316 NAG C1 C2 sing N N 317 NAG C1 O1 sing N N 318 NAG C1 O5 sing N N 319 NAG C1 H1 sing N N 320 NAG C2 C3 sing N N 321 NAG C2 N2 sing N N 322 NAG C2 H2 sing N N 323 NAG C3 C4 sing N N 324 NAG C3 O3 sing N N 325 NAG C3 H3 sing N N 326 NAG C4 C5 sing N N 327 NAG C4 O4 sing N N 328 NAG C4 H4 sing N N 329 NAG C5 C6 sing N N 330 NAG C5 O5 sing N N 331 NAG C5 H5 sing N N 332 NAG C6 O6 sing N N 333 NAG C6 H61 sing N N 334 NAG C6 H62 sing N N 335 NAG C7 C8 sing N N 336 NAG C7 N2 sing N N 337 NAG C7 O7 doub N N 338 NAG C8 H81 sing N N 339 NAG C8 H82 sing N N 340 NAG C8 H83 sing N N 341 NAG N2 HN2 sing N N 342 NAG O1 HO1 sing N N 343 NAG O3 HO3 sing N N 344 NAG O4 HO4 sing N N 345 NAG O6 HO6 sing N N 346 PHE N CA sing N N 347 PHE N H sing N N 348 PHE N H2 sing N N 349 PHE CA C sing N N 350 PHE CA CB sing N N 351 PHE CA HA sing N N 352 PHE C O doub N N 353 PHE C OXT sing N N 354 PHE CB CG sing N N 355 PHE CB HB2 sing N N 356 PHE CB HB3 sing N N 357 PHE CG CD1 doub Y N 358 PHE CG CD2 sing Y N 359 PHE CD1 CE1 sing Y N 360 PHE CD1 HD1 sing N N 361 PHE CD2 CE2 doub Y N 362 PHE CD2 HD2 sing N N 363 PHE CE1 CZ doub Y N 364 PHE CE1 HE1 sing N N 365 PHE CE2 CZ sing Y N 366 PHE CE2 HE2 sing N N 367 PHE CZ HZ sing N N 368 PHE OXT HXT sing N N 369 PRO N CA sing N N 370 PRO N CD sing N N 371 PRO N H sing N N 372 PRO CA C sing N N 373 PRO CA CB sing N N 374 PRO CA HA sing N N 375 PRO C O doub N N 376 PRO C OXT sing N N 377 PRO CB CG sing N N 378 PRO CB HB2 sing N N 379 PRO CB HB3 sing N N 380 PRO CG CD sing N N 381 PRO CG HG2 sing N N 382 PRO CG HG3 sing N N 383 PRO CD HD2 sing N N 384 PRO CD HD3 sing N N 385 PRO OXT HXT sing N N 386 SER N CA sing N N 387 SER N H sing N N 388 SER N H2 sing N N 389 SER CA C sing N N 390 SER CA CB sing N N 391 SER CA HA sing N N 392 SER C O doub N N 393 SER C OXT sing N N 394 SER CB OG sing N N 395 SER CB HB2 sing N N 396 SER CB HB3 sing N N 397 SER OG HG sing N N 398 SER OXT HXT sing N N 399 THR N CA sing N N 400 THR N H sing N N 401 THR N H2 sing N N 402 THR CA C sing N N 403 THR CA CB sing N N 404 THR CA HA sing N N 405 THR C O doub N N 406 THR C OXT sing N N 407 THR CB OG1 sing N N 408 THR CB CG2 sing N N 409 THR CB HB sing N N 410 THR OG1 HG1 sing N N 411 THR CG2 HG21 sing N N 412 THR CG2 HG22 sing N N 413 THR CG2 HG23 sing N N 414 THR OXT HXT sing N N 415 TRP N CA sing N N 416 TRP N H sing N N 417 TRP N H2 sing N N 418 TRP CA C sing N N 419 TRP CA CB sing N N 420 TRP CA HA sing N N 421 TRP C O doub N N 422 TRP C OXT sing N N 423 TRP CB CG sing N N 424 TRP CB HB2 sing N N 425 TRP CB HB3 sing N N 426 TRP CG CD1 doub Y N 427 TRP CG CD2 sing Y N 428 TRP CD1 NE1 sing Y N 429 TRP CD1 HD1 sing N N 430 TRP CD2 CE2 doub Y N 431 TRP CD2 CE3 sing Y N 432 TRP NE1 CE2 sing Y N 433 TRP NE1 HE1 sing N N 434 TRP CE2 CZ2 sing Y N 435 TRP CE3 CZ3 doub Y N 436 TRP CE3 HE3 sing N N 437 TRP CZ2 CH2 doub Y N 438 TRP CZ2 HZ2 sing N N 439 TRP CZ3 CH2 sing Y N 440 TRP CZ3 HZ3 sing N N 441 TRP CH2 HH2 sing N N 442 TRP OXT HXT sing N N 443 TYR N CA sing N N 444 TYR N H sing N N 445 TYR N H2 sing N N 446 TYR CA C sing N N 447 TYR CA CB sing N N 448 TYR CA HA sing N N 449 TYR C O doub N N 450 TYR C OXT sing N N 451 TYR CB CG sing N N 452 TYR CB HB2 sing N N 453 TYR CB HB3 sing N N 454 TYR CG CD1 doub Y N 455 TYR CG CD2 sing Y N 456 TYR CD1 CE1 sing Y N 457 TYR CD1 HD1 sing N N 458 TYR CD2 CE2 doub Y N 459 TYR CD2 HD2 sing N N 460 TYR CE1 CZ doub Y N 461 TYR CE1 HE1 sing N N 462 TYR CE2 CZ sing Y N 463 TYR CE2 HE2 sing N N 464 TYR CZ OH sing N N 465 TYR OH HH sing N N 466 TYR OXT HXT sing N N 467 VAL N CA sing N N 468 VAL N H sing N N 469 VAL N H2 sing N N 470 VAL CA C sing N N 471 VAL CA CB sing N N 472 VAL CA HA sing N N 473 VAL C O doub N N 474 VAL C OXT sing N N 475 VAL CB CG1 sing N N 476 VAL CB CG2 sing N N 477 VAL CB HB sing N N 478 VAL CG1 HG11 sing N N 479 VAL CG1 HG12 sing N N 480 VAL CG1 HG13 sing N N 481 VAL CG2 HG21 sing N N 482 VAL CG2 HG22 sing N N 483 VAL CG2 HG23 sing N N 484 VAL OXT HXT sing N N 485 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 FUC 2 n # _atom_sites.entry_id 5A0B _atom_sites.fract_transf_matrix[1][1] 0.012910 _atom_sites.fract_transf_matrix[1][2] 0.007454 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014907 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006683 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O S # loop_