HEADER CALCIUM-BINDING PROTEIN 19-MAY-15 5A2H TITLE CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA CALMODULIN-7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALMODULIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HELIX-LOOP-HELIX; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS, THALE-CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET20B KEYWDS CALCIUM-BINDING PROTEIN, PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.KUMAR,S.GOURINATH REVDAT 4 10-JAN-24 5A2H 1 REMARK LINK REVDAT 3 28-SEP-16 5A2H 1 JRNL REVDAT 2 24-AUG-16 5A2H 1 JRNL REVDAT 1 30-MAR-16 5A2H 0 JRNL AUTH S.KUMAR,M.MAZUMDER,N.GUPTA,S.CHATTOPADHYAY,S.GOURINATH JRNL TITL CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA CALMODULIN7 AND JRNL TITL 2 INSIGHT INTO ITS MODE OF DNA BINDING. JRNL REF FEBS LETT. V. 590 3029 2016 JRNL REFN ISSN 0014-5793 JRNL PMID 27500568 JRNL DOI 10.1002/1873-3468.12349 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 8390 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 439 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 459 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE SET COUNT : 27 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1157 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 46 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.10000 REMARK 3 B22 (A**2) : -0.62000 REMARK 3 B33 (A**2) : -0.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.267 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.214 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.161 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.624 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1193 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1115 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1602 ; 1.667 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2575 ; 0.852 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 146 ; 5.952 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;31.299 ;26.866 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 221 ;16.843 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;26.510 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 178 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1360 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 243 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 588 ; 2.686 ; 3.091 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 586 ; 2.616 ; 3.075 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 732 ; 4.001 ; 4.595 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 605 ; 3.677 ; 3.594 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 149 REMARK 3 ORIGIN FOR THE GROUP (A): -9.4207 7.9484 -25.0351 REMARK 3 T TENSOR REMARK 3 T11: 0.0794 T22: 0.1703 REMARK 3 T33: 0.1685 T12: -0.0387 REMARK 3 T13: -0.0115 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 1.2312 L22: 1.0761 REMARK 3 L33: 1.9722 L12: -1.1025 REMARK 3 L13: 1.5023 L23: -1.4371 REMARK 3 S TENSOR REMARK 3 S11: 0.0126 S12: 0.0649 S13: 0.1787 REMARK 3 S21: -0.0099 S22: -0.0982 S23: -0.0501 REMARK 3 S31: 0.0465 S32: 0.0351 S33: 0.0856 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 5A2H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1290063806. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 77.15 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.985 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8910 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 6.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.20000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1RFJ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD 60%, SODIUM ACETATE PH 4.2, CACL2 REMARK 280 5MM REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 12.22750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.64500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.95050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.64500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 12.22750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.95050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 116 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 91 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 39 11.59 -55.59 REMARK 500 ALA A 148 92.36 -43.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1150 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 21 OD1 REMARK 620 2 ASP A 23 OD1 84.6 REMARK 620 3 ASP A 23 OD2 124.8 43.5 REMARK 620 4 ASP A 25 OD1 75.9 70.5 97.0 REMARK 620 5 CYS A 27 O 77.7 137.0 150.1 67.3 REMARK 620 6 GLU A 32 OE1 110.5 139.8 103.3 148.2 83.3 REMARK 620 7 GLU A 32 OE2 108.4 85.8 60.3 155.5 137.0 54.3 REMARK 620 8 HOH A2003 O 157.2 91.1 61.0 81.5 90.6 87.1 93.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1151 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 57 OD1 REMARK 620 2 ASP A 59 OD1 66.4 REMARK 620 3 ASN A 61 OD1 79.2 66.5 REMARK 620 4 THR A 63 O 76.4 131.0 76.5 REMARK 620 5 GLU A 68 OE1 98.7 127.1 164.3 87.9 REMARK 620 6 GLU A 68 OE2 85.0 73.1 139.6 135.1 54.7 REMARK 620 7 HOH A2008 O 154.1 87.8 93.0 126.1 95.2 85.3 REMARK 620 8 HOH A2013 O 134.7 120.2 66.7 67.6 106.3 140.2 59.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1152 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 94 OD1 REMARK 620 2 ASP A 96 OD1 87.8 REMARK 620 3 ASN A 98 OD1 76.7 86.6 REMARK 620 4 PHE A 100 O 76.2 155.5 71.8 REMARK 620 5 GLU A 105 OE2 104.9 70.3 156.7 131.5 REMARK 620 6 GLU A 105 OE1 102.8 125.8 147.6 76.6 55.5 REMARK 620 7 HOH A2025 O 168.9 92.2 92.2 99.9 85.5 86.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1153 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 130 OD1 REMARK 620 2 ASP A 132 OD1 84.6 REMARK 620 3 ASP A 134 OD1 86.9 77.5 REMARK 620 4 GLN A 136 O 86.1 151.2 74.9 REMARK 620 5 GLU A 141 OE2 87.6 77.5 154.8 129.2 REMARK 620 6 GLU A 141 OE1 100.8 129.1 152.5 79.4 52.6 REMARK 620 7 HOH A2041 O 163.6 82.5 80.5 100.4 99.4 95.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1155 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1156 DBREF 5A2H A 1 149 UNP D7LMD4 D7LMD4_ARALL 1 149 SEQRES 1 A 149 MET ALA ASP GLN LEU THR ASP ASP GLN ILE SER GLU PHE SEQRES 2 A 149 LYS GLU ALA PHE SER LEU PHE ASP LYS ASP GLY ASP GLY SEQRES 3 A 149 CYS ILE THR THR LYS GLU LEU GLY THR VAL MET ARG SER SEQRES 4 A 149 LEU GLY GLN ASN PRO THR GLU ALA GLU LEU GLN ASP MET SEQRES 5 A 149 ILE ASN GLU VAL ASP ALA ASP GLY ASN GLY THR ILE ASP SEQRES 6 A 149 PHE PRO GLU PHE LEU ASN LEU MET ALA ARG LYS MET LYS SEQRES 7 A 149 ASP THR ASP SER GLU GLU GLU LEU LYS GLU ALA PHE ARG SEQRES 8 A 149 VAL PHE ASP LYS ASP GLN ASN GLY PHE ILE SER ALA ALA SEQRES 9 A 149 GLU LEU ARG HIS VAL MET THR ASN LEU GLY GLU LYS LEU SEQRES 10 A 149 THR ASP GLU GLU VAL ASP GLU MET ILE ARG GLU ALA ASP SEQRES 11 A 149 VAL ASP GLY ASP GLY GLN ILE ASN TYR GLU GLU PHE VAL SEQRES 12 A 149 LYS VAL MET MET ALA LYS HET CA A1150 1 HET CA A1151 1 HET CA A1152 1 HET CA A1153 1 HET MPD A1154 8 HET MPD A1155 8 HET MPD A1156 8 HET ACT A1157 4 HETNAM CA CALCIUM ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM ACT ACETATE ION FORMUL 2 CA 4(CA 2+) FORMUL 6 MPD 3(C6 H14 O2) FORMUL 9 ACT C2 H3 O2 1- FORMUL 10 HOH *46(H2 O) HELIX 1 1 THR A 6 ASP A 21 1 16 HELIX 2 2 THR A 29 SER A 39 1 11 HELIX 3 3 THR A 45 GLU A 55 1 11 HELIX 4 4 PHE A 66 ASP A 94 1 29 HELIX 5 5 SER A 102 LEU A 113 1 12 HELIX 6 6 THR A 118 ASP A 130 1 13 HELIX 7 7 ASN A 138 ALA A 148 1 11 SHEET 1 AA 2 CYS A 27 ILE A 28 0 SHEET 2 AA 2 ILE A 64 ASP A 65 -1 O ILE A 64 N ILE A 28 LINK OD1 ASP A 21 CA CA A1150 1555 1555 2.38 LINK OD1 ASP A 23 CA CA A1150 1555 1555 2.47 LINK OD2 ASP A 23 CA CA A1150 1555 1555 3.14 LINK OD1 ASP A 25 CA CA A1150 1555 1555 2.34 LINK O CYS A 27 CA CA A1150 1555 1555 2.61 LINK OE1 GLU A 32 CA CA A1150 1555 1555 2.42 LINK OE2 GLU A 32 CA CA A1150 1555 1555 2.39 LINK OD1 ASP A 57 CA CA A1151 1555 1555 2.36 LINK OD1 ASP A 59 CA CA A1151 1555 1555 2.29 LINK OD1 ASN A 61 CA CA A1151 1555 1555 2.57 LINK O THR A 63 CA CA A1151 1555 1555 2.35 LINK OE1 GLU A 68 CA CA A1151 1555 1555 2.24 LINK OE2 GLU A 68 CA CA A1151 1555 1555 2.51 LINK OD1 ASP A 94 CA CA A1152 1555 1555 2.26 LINK OD1 ASP A 96 CA CA A1152 1555 1555 2.16 LINK OD1 ASN A 98 CA CA A1152 1555 1555 2.31 LINK O PHE A 100 CA CA A1152 1555 1555 2.30 LINK OE2 GLU A 105 CA CA A1152 1555 1555 2.38 LINK OE1 GLU A 105 CA CA A1152 1555 1555 2.34 LINK OD1 ASP A 130 CA CA A1153 1555 1555 2.35 LINK OD1 ASP A 132 CA CA A1153 1555 1555 2.31 LINK OD1 ASP A 134 CA CA A1153 1555 1555 2.25 LINK O GLN A 136 CA CA A1153 1555 1555 2.35 LINK OE2 GLU A 141 CA CA A1153 1555 1555 2.51 LINK OE1 GLU A 141 CA CA A1153 1555 1555 2.36 LINK CA CA A1150 O HOH A2003 1555 1555 2.42 LINK CA CA A1151 O HOH A2008 1555 1555 2.36 LINK CA CA A1151 O HOH A2013 1555 1555 2.92 LINK CA CA A1152 O HOH A2025 1555 1555 2.45 LINK CA CA A1153 O HOH A2041 1555 1555 2.41 SITE 1 AC1 6 ASP A 21 ASP A 23 ASP A 25 CYS A 27 SITE 2 AC1 6 GLU A 32 HOH A2003 SITE 1 AC2 7 ASP A 57 ASP A 59 ASN A 61 THR A 63 SITE 2 AC2 7 GLU A 68 HOH A2008 HOH A2013 SITE 1 AC3 6 ASP A 94 ASP A 96 ASN A 98 PHE A 100 SITE 2 AC3 6 GLU A 105 HOH A2025 SITE 1 AC4 6 ASP A 130 ASP A 132 ASP A 134 GLN A 136 SITE 2 AC4 6 GLU A 141 HOH A2041 SITE 1 AC5 5 LYS A 87 PHE A 90 TYR A 139 HOH A2039 SITE 2 AC5 5 HOH A2046 SITE 1 AC6 5 LEU A 106 MET A 125 ALA A 129 VAL A 145 SITE 2 AC6 5 MET A 146 SITE 1 AC7 6 PRO A 67 ALA A 103 ASP A 123 ARG A 127 SITE 2 AC7 6 GLY A 135 HOH A2037 CRYST1 24.455 67.901 111.290 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.040891 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014727 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008986 0.00000