HEADER IMMUNE SYSTEM 25-MAY-15 5A2U TITLE CRYSTAL STRUCTURE OF BBA68 OR BBCRASP-1 FROM BORRELIA BURGDORFERI TITLE 2 STRAIN B31 COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPLEMENT REGULATOR ACQUIRING PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 65-251; COMPND 5 SYNONYM: BBA68 OR BBCRASP-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORRELIA BURGDORFERI; SOURCE 3 ORGANISM_TAXID: 224326; SOURCE 4 STRAIN: B31; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM-11 KEYWDS IMMUNE SYSTEM, LYME DISEASE, LIPOPROTEIN, OUTER SURFACE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.BRANGULIS,E.BERTULIS,I.PETROVSKIS,A.KAZAKS,K.TARS REVDAT 3 10-JAN-24 5A2U 1 REMARK REVDAT 2 17-JAN-18 5A2U 1 REMARK REVDAT 1 10-JUN-15 5A2U 0 JRNL AUTH K.BRANGULIS,I.PETROVSKIS,A.KAZAKS,K.TARS JRNL TITL CRYSTAL STRUCTURE OF BBA68 OR BBCRASP-1 FROM BORRELIA JRNL TITL 2 BURGDORFERI STRAIN B31 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 8961 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.246 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 441 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 673 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.4190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2973 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 101.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.44000 REMARK 3 B22 (A**2) : 0.44000 REMARK 3 B33 (A**2) : -0.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.389 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.749 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3009 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3003 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4024 ; 1.998 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6957 ; 1.046 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 351 ; 6.247 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 153 ;39.281 ;26.863 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 654 ;19.447 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;12.008 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 448 ; 0.173 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3310 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 639 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1416 ; 6.413 ; 9.764 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1415 ; 6.413 ; 9.762 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1763 ; 9.937 ;14.645 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1764 ; 9.935 ;14.646 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1592 ; 6.677 ;10.414 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1593 ; 6.675 ;10.415 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2262 ;10.781 ;15.337 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 12748 ;15.819 ;92.844 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 12749 ;15.819 ;92.846 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 5A2U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1290063752. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0688 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : RH-COATED TOROIDAL SI MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9488 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 56.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.16000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1W33 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 10 000 0.1M TRIS PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 197.14000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 98.57000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 295.71000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 197.14000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 295.71000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 98.57000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 98.57000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 MET A 4 REMARK 465 GLY A 5 REMARK 465 ASP A 6 REMARK 465 GLU A 7 REMARK 465 LYS A 8 REMARK 465 ILE A 9 REMARK 465 MET A 10 REMARK 465 GLU A 11 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 MET B 4 REMARK 465 GLY B 5 REMARK 465 ASP B 6 REMARK 465 GLU B 7 REMARK 465 LYS B 8 REMARK 465 ILE B 9 REMARK 465 MET B 10 REMARK 465 GLU B 11 REMARK 465 PHE B 43 REMARK 465 VAL B 51 REMARK 465 GLY B 52 REMARK 465 PRO B 53 REMARK 465 TYR B 54 REMARK 465 ASP B 55 REMARK 465 LEU B 56 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 55 OH TYR A 105 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 153 O PRO A 189 5555 2.08 REMARK 500 NZ LYS A 153 O ALA A 190 5555 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 146 N - CA - CB ANGL. DEV. = 13.0 DEGREES REMARK 500 THR B 12 CA - C - N ANGL. DEV. = 19.1 DEGREES REMARK 500 THR B 12 O - C - N ANGL. DEV. = -11.6 DEGREES REMARK 500 GLU B 25 N - CA - CB ANGL. DEV. = 11.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 13 -4.89 65.93 REMARK 500 LYS A 42 -3.77 82.41 REMARK 500 PHE A 43 42.72 -109.02 REMARK 500 THR A 68 -73.44 -58.70 REMARK 500 TYR A 75 24.18 41.90 REMARK 500 LYS A 92 -4.91 -53.85 REMARK 500 HIS A 96 0.59 -67.02 REMARK 500 ILE A 104 -73.40 -95.43 REMARK 500 SER A 108 -71.23 -49.70 REMARK 500 ASN A 124 27.16 -77.61 REMARK 500 GLN A 131 -42.11 109.17 REMARK 500 GLU A 132 -30.72 -176.08 REMARK 500 ILE B 13 -70.79 89.57 REMARK 500 TYR B 75 20.74 47.66 REMARK 500 LYS B 92 8.17 -58.23 REMARK 500 LEU B 129 -75.62 -90.13 REMARK 500 SER B 130 165.91 114.09 REMARK 500 TYR B 180 -61.57 -105.21 REMARK 500 TYR B 181 37.05 -79.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS B 160 -10.09 REMARK 500 REMARK 500 REMARK: NULL DBREF 5A2U A 6 192 UNP Q66ZA0 Q66ZA0_BORBG 65 251 DBREF 5A2U B 6 192 UNP Q66ZA0 Q66ZA0_BORBG 65 251 SEQADV 5A2U GLY A 2 UNP Q66ZA0 EXPRESSION TAG SEQADV 5A2U ALA A 3 UNP Q66ZA0 EXPRESSION TAG SEQADV 5A2U MET A 4 UNP Q66ZA0 EXPRESSION TAG SEQADV 5A2U GLY A 5 UNP Q66ZA0 EXPRESSION TAG SEQADV 5A2U GLY B 2 UNP Q66ZA0 EXPRESSION TAG SEQADV 5A2U ALA B 3 UNP Q66ZA0 EXPRESSION TAG SEQADV 5A2U MET B 4 UNP Q66ZA0 EXPRESSION TAG SEQADV 5A2U GLY B 5 UNP Q66ZA0 EXPRESSION TAG SEQRES 1 A 191 GLY ALA MET GLY ASP GLU LYS ILE MET GLU THR ILE ALA SEQRES 2 A 191 SER GLU LEU LYS ALA ILE GLY LYS GLU LEU GLU ASP GLN SEQRES 3 A 191 LYS LYS GLU GLU ASN ILE GLN ILE ALA LYS ILE ALA LYS SEQRES 4 A 191 GLU LYS PHE ASP PHE LEU SER THR PHE LYS VAL GLY PRO SEQRES 5 A 191 TYR ASP LEU ILE ASP GLU ASP ILE GLN MET LYS ILE LYS SEQRES 6 A 191 ARG THR LEU TYR SER SER LEU ASP TYR LYS LYS GLU ASN SEQRES 7 A 191 ILE GLU LYS LEU LYS GLU ILE LEU GLU ILE LEU LYS LYS SEQRES 8 A 191 ASN SER GLU HIS TYR ASN ILE ILE GLY ARG LEU ILE TYR SEQRES 9 A 191 HIS ILE SER TRP GLY ILE GLN PHE GLN ILE GLU GLN ASN SEQRES 10 A 191 LEU GLU LEU ILE GLN ASN GLY VAL GLU ASN LEU SER GLN SEQRES 11 A 191 GLU GLU SER LYS SER LEU LEU MET GLN ILE LYS SER ASN SEQRES 12 A 191 LEU GLU ILE LYS GLN ARG LEU LYS LYS THR LEU ASN GLU SEQRES 13 A 191 THR LEU LYS VAL TYR ASN GLN ASN THR GLN ASP ASN GLU SEQRES 14 A 191 LYS ILE LEU ALA GLU HIS PHE ASN LYS TYR TYR LYS ASP SEQRES 15 A 191 PHE ASP THR LEU LYS PRO ALA PHE TYR SEQRES 1 B 191 GLY ALA MET GLY ASP GLU LYS ILE MET GLU THR ILE ALA SEQRES 2 B 191 SER GLU LEU LYS ALA ILE GLY LYS GLU LEU GLU ASP GLN SEQRES 3 B 191 LYS LYS GLU GLU ASN ILE GLN ILE ALA LYS ILE ALA LYS SEQRES 4 B 191 GLU LYS PHE ASP PHE LEU SER THR PHE LYS VAL GLY PRO SEQRES 5 B 191 TYR ASP LEU ILE ASP GLU ASP ILE GLN MET LYS ILE LYS SEQRES 6 B 191 ARG THR LEU TYR SER SER LEU ASP TYR LYS LYS GLU ASN SEQRES 7 B 191 ILE GLU LYS LEU LYS GLU ILE LEU GLU ILE LEU LYS LYS SEQRES 8 B 191 ASN SER GLU HIS TYR ASN ILE ILE GLY ARG LEU ILE TYR SEQRES 9 B 191 HIS ILE SER TRP GLY ILE GLN PHE GLN ILE GLU GLN ASN SEQRES 10 B 191 LEU GLU LEU ILE GLN ASN GLY VAL GLU ASN LEU SER GLN SEQRES 11 B 191 GLU GLU SER LYS SER LEU LEU MET GLN ILE LYS SER ASN SEQRES 12 B 191 LEU GLU ILE LYS GLN ARG LEU LYS LYS THR LEU ASN GLU SEQRES 13 B 191 THR LEU LYS VAL TYR ASN GLN ASN THR GLN ASP ASN GLU SEQRES 14 B 191 LYS ILE LEU ALA GLU HIS PHE ASN LYS TYR TYR LYS ASP SEQRES 15 B 191 PHE ASP THR LEU LYS PRO ALA PHE TYR HELIX 1 1 ALA A 14 LYS A 42 1 29 HELIX 2 2 ASP A 44 PHE A 49 5 6 HELIX 3 3 ASP A 58 ASP A 74 1 17 HELIX 4 4 LYS A 76 LYS A 92 1 17 HELIX 5 5 HIS A 96 TYR A 105 1 10 HELIX 6 6 HIS A 106 ASN A 124 1 19 HELIX 7 7 GLU A 132 TYR A 181 1 50 HELIX 8 8 ILE B 13 LYS B 40 1 28 HELIX 9 9 ASP B 44 THR B 48 5 5 HELIX 10 10 ASP B 58 LEU B 73 1 16 HELIX 11 11 LYS B 76 LYS B 92 1 17 HELIX 12 12 HIS B 96 TYR B 105 1 10 HELIX 13 13 HIS B 106 GLN B 123 1 18 HELIX 14 14 GLU B 133 TYR B 181 1 49 HELIX 15 15 ASP B 183 LEU B 187 5 5 CISPEP 1 THR A 12 ILE A 13 0 -1.75 CISPEP 2 THR B 12 ILE B 13 0 -7.51 CRYST1 54.630 54.630 394.280 90.00 90.00 90.00 P 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018305 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018305 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002536 0.00000