HEADER TRANSPORT PROTEIN 04-JUN-15 5A40 TITLE CRYSTAL STRUCTURE OF A DUAL TOPOLOGY FLUORIDE ION CHANNEL. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE FLUORIDE ION TRANSPORTER CRCB; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: FLUORIDE CHANNEL; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MONOBODIES; COMPND 9 CHAIN: E, F, G, H; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA PERTUSSIS; SOURCE 3 ORGANISM_TAXID: 520; SOURCE 4 STRAIN: TOHAMA 1; SOURCE 5 ATCC: BAA-589; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PASK-IBA2; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_PLASMID: PHFT2 KEYWDS TRANSPORT PROTEIN, FLUORIDE ION CHANNEL, MONOBODY, BPE EXPDTA X-RAY DIFFRACTION AUTHOR R.B.STOCKBRIDGE,L.KOLMAKOVA-PARTENSKY,T.SHANE,A.KOIDE,S.KOIDE, AUTHOR 2 C.MILLER,S.NEWSTEAD REVDAT 3 30-SEP-15 5A40 1 JRNL REVDAT 2 23-SEP-15 5A40 1 JRNL REVDAT 1 02-SEP-15 5A40 0 JRNL AUTH R.B.STOCKBRIDGE,L.KOLMAKOVA-PARTENSKY,T.SHANE,A.KOIDE, JRNL AUTH 2 S.KOIDE,C.MILLER,S.NEWSTEAD JRNL TITL CRYSTAL STRUCTURES OF A DOUBLE-BARRELLED FLUORIDE ION JRNL TITL 2 CHANNEL. JRNL REF NATURE V.525 548 2015 JRNL REFN ISSN 0028-0836 JRNL PMID 26344196 JRNL DOI 10.1038/NATURE14981 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU, REMARK 3 STEINER,NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.600 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 114.708 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.0 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.188 REMARK 3 NUMBER OF REFLECTIONS : 22219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.2348 REMARK 3 FREE R VALUE : 0.2697 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.14 REMARK 3 FREE R VALUE TEST SET COUNT : 1134 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.6 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.694 REMARK 3 REFLECTION IN BIN (WORKING SET) : 653 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 40.693 REMARK 3 BIN R VALUE (WORKING SET) : 0.279 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.311 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6484 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.9 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.589 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.282 REMARK 3 B22 (A**2) : -0.415 REMARK 3 B33 (A**2) : 0.697 REMARK 3 B12 (A**2) : 0.000 REMARK 3 B13 (A**2) : 0.000 REMARK 3 B23 (A**2) : 0.000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.73 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.560 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.369 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.286 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.847 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.846 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6696 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 6324 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9212 ; 1.531 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14471 ; 1.125 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 856 ; 7.697 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 210 ;34.197 ;21.714 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 923 ;20.343 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;19.741 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1086 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7458 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1546 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1746 ; 0.241 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 80 ; 0.329 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3343 ; 0.201 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 185 ; 0.132 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3433 ; 5.961 ; 7.734 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3432 ; 5.960 ; 7.733 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4280 ; 9.546 ;11.582 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3263 ; 5.533 ; 8.138 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4930 ; 8.903 ;12.078 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.200 REMARK 3 ION PROBE RADIUS : 0.800 REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 5A40 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JUN-15. REMARK 100 THE PDBE ID CODE IS EBI-63973. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.006 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS 6M) REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23518 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.60 REMARK 200 RESOLUTION RANGE LOW (A) : 48.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.3 REMARK 200 R MERGE (I) : 0.09 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.60 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.7 REMARK 200 R MERGE FOR SHELL (I) : 0.63 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.60 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX SHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 36-41% PEG 550 MME, 0.2M MGCL, REMARK 280 0.1M TRIS-HCL, PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 73.39500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 91.85000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 73.39500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 91.85000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -114.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -113.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, H, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 THR B 3 REMARK 465 TYR B 4 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 465 LEU D 2 REMARK 465 THR D 3 REMARK 465 TYR D 4 REMARK 465 VAL F 2 REMARK 465 SER F 3 REMARK 465 VAL G 2 REMARK 465 SER G 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS E 78 N TYR E 80 2.15 REMARK 500 O VAL F 5 N THR F 7 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO E 6 C - N - CD ANGL. DEV. = -15.1 DEGREES REMARK 500 PRO F 6 C - N - CD ANGL. DEV. = -14.2 DEGREES REMARK 500 VAL G 5 N - CA - C ANGL. DEV. = 19.2 DEGREES REMARK 500 PRO G 6 C - N - CA ANGL. DEV. = -14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 72 -60.29 -90.47 REMARK 500 SER A 83 -73.03 -42.03 REMARK 500 LEU A 126 37.42 -86.88 REMARK 500 LEU A 127 34.01 -149.10 REMARK 500 VAL B 72 -60.80 -91.54 REMARK 500 SER B 83 -73.57 -41.92 REMARK 500 LEU B 126 37.46 -87.01 REMARK 500 LEU B 127 39.76 -144.82 REMARK 500 VAL C 72 -60.14 -90.63 REMARK 500 SER C 83 -73.02 -41.69 REMARK 500 LEU C 126 36.96 -86.95 REMARK 500 LEU C 127 34.74 -147.93 REMARK 500 SER D 83 -73.18 -40.59 REMARK 500 LEU D 126 37.66 -87.90 REMARK 500 LEU D 127 39.66 -143.03 REMARK 500 SER E 4 126.30 15.05 REMARK 500 VAL E 5 -143.89 -136.15 REMARK 500 PRO E 6 34.37 -10.25 REMARK 500 THR E 7 136.45 -4.04 REMARK 500 LYS E 8 84.72 64.95 REMARK 500 THR E 15 148.89 64.84 REMARK 500 ALA E 27 118.06 -11.40 REMARK 500 THR E 40 116.67 -39.92 REMARK 500 ALA E 42 88.53 -67.42 REMARK 500 PRO E 52 -154.73 -80.15 REMARK 500 SER E 54 -150.05 -110.77 REMARK 500 LYS E 55 29.50 -160.43 REMARK 500 GLU E 77 81.60 51.77 REMARK 500 HIS E 78 -172.83 40.10 REMARK 500 MET E 79 -8.12 1.77 REMARK 500 VAL F 5 -145.55 -120.76 REMARK 500 PRO F 6 23.78 -14.79 REMARK 500 THR F 7 156.44 19.39 REMARK 500 LYS F 8 -94.81 63.19 REMARK 500 LEU F 9 122.20 65.76 REMARK 500 ALA F 14 -138.21 -116.97 REMARK 500 THR F 15 147.88 51.91 REMARK 500 PRO F 26 -178.78 -64.63 REMARK 500 ALA F 27 111.90 -13.25 REMARK 500 VAL F 28 -146.83 -90.23 REMARK 500 PRO F 52 -154.58 -81.17 REMARK 500 SER F 54 -148.78 -111.33 REMARK 500 LYS F 55 25.95 -158.91 REMARK 500 GLU F 77 88.91 -169.16 REMARK 500 HIS F 78 -102.91 42.98 REMARK 500 VAL G 5 -72.79 -110.80 REMARK 500 PRO G 6 30.78 -66.62 REMARK 500 THR G 7 136.17 -4.63 REMARK 500 LYS G 8 93.90 64.93 REMARK 500 ALA G 13 -148.27 -119.51 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL E 5 PRO E 6 -136.04 REMARK 500 VAL F 5 PRO F 6 -135.13 REMARK 500 ALA F 14 THR F 15 -147.11 REMARK 500 SER H 3 SER H 4 141.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN A 31 19.1 L L OUTSIDE RANGE REMARK 500 VAL G 5 15.8 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG F1092 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 91 OD1 REMARK 620 2 CYS B 94 SG 113.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG F1092 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG E1092 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG G1092 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG H1092 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5A41 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A FLUORIDE ION CHANNEL REMARK 900 RELATED ID: 5A43 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A FLUORIDE CHANNEL DBREF 5A40 A 1 128 UNP Q7VYU0 CRCB_BORPE 1 128 DBREF 5A40 B 1 128 UNP Q7VYU0 CRCB_BORPE 1 128 DBREF 5A40 C 1 128 UNP Q7VYU0 CRCB_BORPE 1 128 DBREF 5A40 D 1 128 UNP Q7VYU0 CRCB_BORPE 1 128 DBREF 5A40 E 2 91 PDB 5A40 5A40 2 91 DBREF 5A40 F 2 91 PDB 5A40 5A40 2 91 DBREF 5A40 G 2 91 PDB 5A40 5A40 2 91 DBREF 5A40 H 2 91 PDB 5A40 5A40 2 91 SEQADV 5A40 LYS A 29 UNP Q7VYU0 ARG 29 CONFLICT SEQADV 5A40 CYS A 94 UNP Q7VYU0 GLU 94 ENGINEERED MUTATION SEQADV 5A40 LYS B 29 UNP Q7VYU0 ARG 29 CONFLICT SEQADV 5A40 CYS B 94 UNP Q7VYU0 GLU 94 ENGINEERED MUTATION SEQADV 5A40 LYS C 29 UNP Q7VYU0 ARG 29 CONFLICT SEQADV 5A40 CYS C 94 UNP Q7VYU0 GLU 94 ENGINEERED MUTATION SEQADV 5A40 LYS D 29 UNP Q7VYU0 ARG 29 CONFLICT SEQADV 5A40 CYS D 94 UNP Q7VYU0 GLU 94 ENGINEERED MUTATION SEQRES 1 A 128 MET LEU THR TYR ALA PRO LEU ASN PHE ILE ALA ILE GLY SEQRES 2 A 128 ILE GLY ALA THR LEU GLY ALA TRP LEU ARG TRP VAL LEU SEQRES 3 A 128 GLY LEU LYS LEU ASN GLY ALA GLY TRP PRO TRP GLY THR SEQRES 4 A 128 LEU THR ALA ASN LEU VAL GLY GLY TYR LEU ILE GLY VAL SEQRES 5 A 128 MET VAL ALA LEU ILE ALA SER HIS PRO GLU TRP PRO ALA SEQRES 6 A 128 TRP ILE ARG LEU ALA ALA VAL THR GLY PHE LEU GLY GLY SEQRES 7 A 128 LEU THR THR PHE SER THR PHE SER ALA GLU THR VAL ASP SEQRES 8 A 128 MET LEU CYS ARG GLY VAL TYR ALA THR ALA ALA ALA TYR SEQRES 9 A 128 ALA GLY ALA SER LEU ALA GLY SER LEU ALA MET THR GLY SEQRES 10 A 128 LEU GLY LEU ALA THR VAL ARG LEU LEU LEU ARG SEQRES 1 B 128 MET LEU THR TYR ALA PRO LEU ASN PHE ILE ALA ILE GLY SEQRES 2 B 128 ILE GLY ALA THR LEU GLY ALA TRP LEU ARG TRP VAL LEU SEQRES 3 B 128 GLY LEU LYS LEU ASN GLY ALA GLY TRP PRO TRP GLY THR SEQRES 4 B 128 LEU THR ALA ASN LEU VAL GLY GLY TYR LEU ILE GLY VAL SEQRES 5 B 128 MET VAL ALA LEU ILE ALA SER HIS PRO GLU TRP PRO ALA SEQRES 6 B 128 TRP ILE ARG LEU ALA ALA VAL THR GLY PHE LEU GLY GLY SEQRES 7 B 128 LEU THR THR PHE SER THR PHE SER ALA GLU THR VAL ASP SEQRES 8 B 128 MET LEU CYS ARG GLY VAL TYR ALA THR ALA ALA ALA TYR SEQRES 9 B 128 ALA GLY ALA SER LEU ALA GLY SER LEU ALA MET THR GLY SEQRES 10 B 128 LEU GLY LEU ALA THR VAL ARG LEU LEU LEU ARG SEQRES 1 C 128 MET LEU THR TYR ALA PRO LEU ASN PHE ILE ALA ILE GLY SEQRES 2 C 128 ILE GLY ALA THR LEU GLY ALA TRP LEU ARG TRP VAL LEU SEQRES 3 C 128 GLY LEU LYS LEU ASN GLY ALA GLY TRP PRO TRP GLY THR SEQRES 4 C 128 LEU THR ALA ASN LEU VAL GLY GLY TYR LEU ILE GLY VAL SEQRES 5 C 128 MET VAL ALA LEU ILE ALA SER HIS PRO GLU TRP PRO ALA SEQRES 6 C 128 TRP ILE ARG LEU ALA ALA VAL THR GLY PHE LEU GLY GLY SEQRES 7 C 128 LEU THR THR PHE SER THR PHE SER ALA GLU THR VAL ASP SEQRES 8 C 128 MET LEU CYS ARG GLY VAL TYR ALA THR ALA ALA ALA TYR SEQRES 9 C 128 ALA GLY ALA SER LEU ALA GLY SER LEU ALA MET THR GLY SEQRES 10 C 128 LEU GLY LEU ALA THR VAL ARG LEU LEU LEU ARG SEQRES 1 D 128 MET LEU THR TYR ALA PRO LEU ASN PHE ILE ALA ILE GLY SEQRES 2 D 128 ILE GLY ALA THR LEU GLY ALA TRP LEU ARG TRP VAL LEU SEQRES 3 D 128 GLY LEU LYS LEU ASN GLY ALA GLY TRP PRO TRP GLY THR SEQRES 4 D 128 LEU THR ALA ASN LEU VAL GLY GLY TYR LEU ILE GLY VAL SEQRES 5 D 128 MET VAL ALA LEU ILE ALA SER HIS PRO GLU TRP PRO ALA SEQRES 6 D 128 TRP ILE ARG LEU ALA ALA VAL THR GLY PHE LEU GLY GLY SEQRES 7 D 128 LEU THR THR PHE SER THR PHE SER ALA GLU THR VAL ASP SEQRES 8 D 128 MET LEU CYS ARG GLY VAL TYR ALA THR ALA ALA ALA TYR SEQRES 9 D 128 ALA GLY ALA SER LEU ALA GLY SER LEU ALA MET THR GLY SEQRES 10 D 128 LEU GLY LEU ALA THR VAL ARG LEU LEU LEU ARG SEQRES 1 E 90 VAL SER SER VAL PRO THR LYS LEU GLU VAL VAL ALA ALA SEQRES 2 E 90 THR PRO THR SER LEU LEU ILE SER TRP ASP ALA PRO ALA SEQRES 3 E 90 VAL THR VAL ASP HIS TYR VAL ILE THR TYR GLY GLU THR SEQRES 4 E 90 GLY ALA TYR TRP SER TYR GLN GLU PHE THR VAL PRO GLY SEQRES 5 E 90 SER LYS THR ALA THR ILE SER GLY LEU LYS PRO GLY VAL SEQRES 6 E 90 ASP TYR THR ILE THR VAL TYR ALA TYR TRP GLU HIS MET SEQRES 7 E 90 TYR HIS TYR SER PRO ILE SER ILE ASN TYR ARG THR SEQRES 1 F 90 VAL SER SER VAL PRO THR LYS LEU GLU VAL VAL ALA ALA SEQRES 2 F 90 THR PRO THR SER LEU LEU ILE SER TRP ASP ALA PRO ALA SEQRES 3 F 90 VAL THR VAL ASP HIS TYR VAL ILE THR TYR GLY GLU THR SEQRES 4 F 90 GLY ALA TYR TRP SER TYR GLN GLU PHE THR VAL PRO GLY SEQRES 5 F 90 SER LYS THR ALA THR ILE SER GLY LEU LYS PRO GLY VAL SEQRES 6 F 90 ASP TYR THR ILE THR VAL TYR ALA TYR TRP GLU HIS MET SEQRES 7 F 90 TYR HIS TYR SER PRO ILE SER ILE ASN TYR ARG THR SEQRES 1 G 90 VAL SER SER VAL PRO THR LYS LEU GLU VAL VAL ALA ALA SEQRES 2 G 90 THR PRO THR SER LEU LEU ILE SER TRP ASP ALA PRO ALA SEQRES 3 G 90 VAL THR VAL ASP HIS TYR VAL ILE THR TYR GLY GLU THR SEQRES 4 G 90 GLY ALA TYR TRP SER TYR GLN GLU PHE THR VAL PRO GLY SEQRES 5 G 90 SER LYS THR ALA THR ILE SER GLY LEU LYS PRO GLY VAL SEQRES 6 G 90 ASP TYR THR ILE THR VAL TYR ALA TYR TRP GLU HIS MET SEQRES 7 G 90 TYR HIS TYR SER PRO ILE SER ILE ASN TYR ARG THR SEQRES 1 H 90 VAL SER SER VAL PRO THR LYS LEU GLU VAL VAL ALA ALA SEQRES 2 H 90 THR PRO THR SER LEU LEU ILE SER TRP ASP ALA PRO ALA SEQRES 3 H 90 VAL THR VAL ASP HIS TYR VAL ILE THR TYR GLY GLU THR SEQRES 4 H 90 GLY ALA TYR TRP SER TYR GLN GLU PHE THR VAL PRO GLY SEQRES 5 H 90 SER LYS THR ALA THR ILE SER GLY LEU LYS PRO GLY VAL SEQRES 6 H 90 ASP TYR THR ILE THR VAL TYR ALA TYR TRP GLU HIS MET SEQRES 7 H 90 TYR HIS TYR SER PRO ILE SER ILE ASN TYR ARG THR HET HG F1092 1 HET HG E1092 1 HET HG G1092 1 HET HG H1092 1 HETNAM HG MERCURY (II) ION FORMUL 9 HG 4(HG 2+) HELIX 1 1 ALA A 5 ASN A 31 1 27 HELIX 2 2 PRO A 36 HIS A 60 1 25 HELIX 3 3 PRO A 64 VAL A 72 1 9 HELIX 4 4 GLY A 74 THR A 80 1 7 HELIX 5 5 PHE A 82 GLY A 96 1 15 HELIX 6 6 VAL A 97 LEU A 126 1 30 HELIX 7 7 ALA B 5 ASN B 31 1 27 HELIX 8 8 PRO B 36 HIS B 60 1 25 HELIX 9 9 PRO B 64 VAL B 72 1 9 HELIX 10 10 GLY B 74 THR B 80 1 7 HELIX 11 11 PHE B 82 GLY B 96 1 15 HELIX 12 12 VAL B 97 LEU B 126 1 30 HELIX 13 13 ALA C 5 ASN C 31 1 27 HELIX 14 14 PRO C 36 HIS C 60 1 25 HELIX 15 15 PRO C 64 VAL C 72 1 9 HELIX 16 16 GLY C 74 THR C 80 1 7 HELIX 17 17 PHE C 82 GLY C 96 1 15 HELIX 18 18 VAL C 97 LEU C 126 1 30 HELIX 19 19 ALA D 5 ASN D 31 1 27 HELIX 20 20 PRO D 36 HIS D 60 1 25 HELIX 21 21 PRO D 64 VAL D 72 1 9 HELIX 22 22 GLY D 74 THR D 80 1 7 HELIX 23 23 PHE D 82 GLY D 96 1 15 HELIX 24 24 VAL D 97 LEU D 126 1 30 HELIX 25 25 ALA E 42 TYR E 46 5 5 HELIX 26 26 ALA F 42 TYR F 46 5 5 HELIX 27 27 ALA G 42 TYR G 46 5 5 HELIX 28 28 ALA H 42 TYR H 46 5 5 SHEET 1 EA 3 LEU E 9 VAL E 12 0 SHEET 2 EA 3 LEU E 19 TRP E 23 -1 O LEU E 20 N VAL E 12 SHEET 3 EA 3 THR E 56 ILE E 59 -1 O ALA E 57 N ILE E 21 SHEET 1 EB 4 GLN E 47 PRO E 52 0 SHEET 2 EB 4 HIS E 32 GLU E 39 -1 O TYR E 33 N VAL E 51 SHEET 3 EB 4 ASP E 67 TYR E 75 -1 O THR E 69 N GLY E 38 SHEET 4 EB 4 HIS E 81 ARG E 90 -1 O TYR E 82 N ALA E 74 SHEET 1 FA 3 GLU F 10 VAL F 11 0 SHEET 2 FA 3 LEU F 19 SER F 22 -1 O SER F 22 N GLU F 10 SHEET 3 FA 3 THR F 56 ILE F 59 -1 O ALA F 57 N ILE F 21 SHEET 1 FB 4 GLN F 47 PRO F 52 0 SHEET 2 FB 4 HIS F 32 GLU F 39 -1 O TYR F 33 N VAL F 51 SHEET 3 FB 4 ASP F 67 GLU F 77 -1 O THR F 69 N GLY F 38 SHEET 4 FB 4 TYR F 80 ARG F 90 -1 O TYR F 80 N GLU F 77 SHEET 1 GA 3 LEU G 9 VAL G 12 0 SHEET 2 GA 3 LEU G 19 TRP G 23 -1 O LEU G 20 N VAL G 12 SHEET 3 GA 3 THR G 56 ILE G 59 -1 O ALA G 57 N ILE G 21 SHEET 1 GB 4 GLN G 47 PRO G 52 0 SHEET 2 GB 4 HIS G 32 GLU G 39 -1 O TYR G 33 N VAL G 51 SHEET 3 GB 4 ASP G 67 TYR G 75 -1 O THR G 69 N GLY G 38 SHEET 4 GB 4 HIS G 81 ARG G 90 -1 O TYR G 82 N ALA G 74 SHEET 1 HA 3 LEU H 9 VAL H 12 0 SHEET 2 HA 3 LEU H 19 TRP H 23 -1 O LEU H 20 N VAL H 12 SHEET 3 HA 3 THR H 56 ILE H 59 -1 O ALA H 57 N ILE H 21 SHEET 1 HB 4 GLN H 47 PRO H 52 0 SHEET 2 HB 4 HIS H 32 GLU H 39 -1 O TYR H 33 N VAL H 51 SHEET 3 HB 4 ASP H 67 TYR H 75 -1 O THR H 69 N GLY H 38 SHEET 4 HB 4 HIS H 81 ARG H 90 -1 O TYR H 82 N ALA H 74 LINK HG HG E1092 SG CYS A 94 1555 1555 2.94 LINK HG HG F1092 OD1 ASP B 91 1555 1555 3.19 LINK HG HG F1092 SG CYS B 94 1555 1555 2.98 LINK HG HG G1092 SG CYS C 94 1555 1555 2.98 LINK HG HG H1092 SG CYS D 94 1555 1555 3.12 CISPEP 1 ALA E 27 VAL E 28 0 23.44 CISPEP 2 ALA F 27 VAL F 28 0 26.63 CISPEP 3 ALA G 14 THR G 15 0 19.04 CISPEP 4 ALA G 27 VAL G 28 0 23.52 CISPEP 5 VAL H 5 PRO H 6 0 26.78 CISPEP 6 ALA H 27 VAL H 28 0 23.26 SITE 1 AC1 3 ASP B 91 CYS B 94 TYR F 75 SITE 1 AC2 3 ASP A 91 CYS A 94 HIS E 81 SITE 1 AC3 3 ASP C 91 CYS C 94 HIS G 81 SITE 1 AC4 3 ASP D 91 CYS D 94 HIS H 81 CRYST1 146.790 183.700 72.880 90.00 90.00 90.00 P 21 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006812 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005444 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013721 0.00000 MTRIX1 1 -0.281500 -0.848200 0.448600 -64.40820 1 MTRIX2 1 -0.846500 -0.000600 -0.532400 -10.90050 1 MTRIX3 1 0.451900 -0.529600 -0.717900 82.11580 1 MTRIX1 2 -0.666000 0.605400 -0.435900 -27.09090 1 MTRIX2 2 0.672500 0.234300 -0.702000 108.13410 1 MTRIX3 2 -0.322900 -0.760600 -0.563200 18.68290 1 MTRIX1 3 -0.539500 -0.707200 0.457000 -140.13270 1 MTRIX2 3 0.730200 -0.122800 0.672100 0.71420 1 MTRIX3 3 -0.419200 0.696300 0.582600 -0.58410 1 MTRIX1 4 -0.329600 -0.832500 0.445400 -66.25460 1 MTRIX2 4 -0.832000 0.033100 -0.553800 -8.52290 1 MTRIX3 4 0.446300 -0.553100 -0.703500 81.00810 1 MTRIX1 5 -0.647000 0.636600 -0.419600 -25.79300 1 MTRIX2 5 0.674400 0.221000 -0.704500 108.34500 1 MTRIX3 5 -0.355800 -0.738800 -0.572300 17.39750 1 MTRIX1 6 -0.535800 -0.718600 0.443300 -139.65320 1 MTRIX2 6 0.711900 -0.102200 0.694800 -1.01180 1 MTRIX3 6 -0.454000 0.687800 0.566400 -2.87140 1