data_5A78 # _entry.id 5A78 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5A78 pdb_00005a78 10.2210/pdb5a78/pdb PDBE EBI-64273 ? ? WWPDB D_1290064273 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-23 2 'Structure model' 1 1 2015-12-09 3 'Structure model' 1 2 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.value' 22 3 'Structure model' '_struct_conn.pdbx_dist_value' 23 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 24 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 31 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 37 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5A78 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-07-03 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 5A72 unspecified 'CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM CA' PDB 5A73 unspecified 'CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM MG' PDB 5A74 unspecified 'CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM MN' PDB 5A75 unspecified 'CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 10 MM MG' PDB 5A77 unspecified ;CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH I-CREI TARGET (C1221) IN THE PRESENCE OF 2 MM MG REVEALING DNA CLEAVED ; # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Molina, R.' 1 'Redondo, P.' 2 'LopezMendez, B.' 3 'Villate, M.' 4 'Merino, N.' 5 'Blanco, F.J.' 6 'Valton, J.' 7 'Grizot, S.' 8 'Duchateau, P.' 9 'Prieto, J.' 10 'Montoya, G.' 11 # _citation.id primary _citation.title 'Crystal Structure of the Homing Endonuclease I-Cvui Provides a New Template for Genome Modification' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 290 _citation.page_first 28727 _citation.page_last ? _citation.year 2015 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26363068 _citation.pdbx_database_id_DOI 10.1074/JBC.M115.678342 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Molina, R.' 1 ? primary 'Redondo, P.' 2 ? primary 'Lopez-Mendez, B.' 3 ? primary 'Villate, M.' 4 ? primary 'Merino, N.' 5 ? primary 'Blanco, F.J.' 6 ? primary 'Valton, J.' 7 ? primary 'Grizot, S.' 8 ? primary 'Duchateau, P.' 9 ? primary 'Prieto, J.' 10 ? primary 'Montoya, G.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA ENDONUCLEASE I-CVUI' 19292.533 2 3.1.-.- ? ? ? 2 polymer syn ;24MER DNA, 5'-D(*TP*CP*AP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP *CP*GP*AP*CP*GP*TP*TP*TP*TP*GP*A)-3' ; 7368.778 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 water nat water 18.015 22 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '23S RRNA INTRON PROTEIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AQPTNFHDQLKFAWLAGFVDADGCINAQIVSREDYLLKYQVRVSLTVFQSTTQHFILLDIQKILGCGTVRKRNDGMSEFC VVGGTSLQTTLEKLLPYLQLKRAQAKLVLQIIKKLPNTKDPSVLMEAALLADKVGLLTDGKKRTILAENVRECLKKLGHV VSAALEHHHHHH ; ;AQPTNFHDQLKFAWLAGFVDADGCINAQIVSREDYLLKYQVRVSLTVFQSTTQHFILLDIQKILGCGTVRKRNDGMSEFC VVGGTSLQTTLEKLLPYLQLKRAQAKLVLQIIKKLPNTKDPSVLMEAALLADKVGLLTDGKKRTILAENVRECLKKLGHV VSAALEHHHHHH ; A,B ? 2 polydeoxyribonucleotide no no ;(DT)(DC)(DA)(DA)(DA)(DA)(DC)(DG)(DT)(DC)(DG)(DT)(DA)(DC)(DG)(DA)(DC)(DG)(DT)(DT) (DT)(DT)(DG)(DA) ; TCAAAACGTCGTACGACGTTTTGA C,D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLN n 1 3 PRO n 1 4 THR n 1 5 ASN n 1 6 PHE n 1 7 HIS n 1 8 ASP n 1 9 GLN n 1 10 LEU n 1 11 LYS n 1 12 PHE n 1 13 ALA n 1 14 TRP n 1 15 LEU n 1 16 ALA n 1 17 GLY n 1 18 PHE n 1 19 VAL n 1 20 ASP n 1 21 ALA n 1 22 ASP n 1 23 GLY n 1 24 CYS n 1 25 ILE n 1 26 ASN n 1 27 ALA n 1 28 GLN n 1 29 ILE n 1 30 VAL n 1 31 SER n 1 32 ARG n 1 33 GLU n 1 34 ASP n 1 35 TYR n 1 36 LEU n 1 37 LEU n 1 38 LYS n 1 39 TYR n 1 40 GLN n 1 41 VAL n 1 42 ARG n 1 43 VAL n 1 44 SER n 1 45 LEU n 1 46 THR n 1 47 VAL n 1 48 PHE n 1 49 GLN n 1 50 SER n 1 51 THR n 1 52 THR n 1 53 GLN n 1 54 HIS n 1 55 PHE n 1 56 ILE n 1 57 LEU n 1 58 LEU n 1 59 ASP n 1 60 ILE n 1 61 GLN n 1 62 LYS n 1 63 ILE n 1 64 LEU n 1 65 GLY n 1 66 CYS n 1 67 GLY n 1 68 THR n 1 69 VAL n 1 70 ARG n 1 71 LYS n 1 72 ARG n 1 73 ASN n 1 74 ASP n 1 75 GLY n 1 76 MET n 1 77 SER n 1 78 GLU n 1 79 PHE n 1 80 CYS n 1 81 VAL n 1 82 VAL n 1 83 GLY n 1 84 GLY n 1 85 THR n 1 86 SER n 1 87 LEU n 1 88 GLN n 1 89 THR n 1 90 THR n 1 91 LEU n 1 92 GLU n 1 93 LYS n 1 94 LEU n 1 95 LEU n 1 96 PRO n 1 97 TYR n 1 98 LEU n 1 99 GLN n 1 100 LEU n 1 101 LYS n 1 102 ARG n 1 103 ALA n 1 104 GLN n 1 105 ALA n 1 106 LYS n 1 107 LEU n 1 108 VAL n 1 109 LEU n 1 110 GLN n 1 111 ILE n 1 112 ILE n 1 113 LYS n 1 114 LYS n 1 115 LEU n 1 116 PRO n 1 117 ASN n 1 118 THR n 1 119 LYS n 1 120 ASP n 1 121 PRO n 1 122 SER n 1 123 VAL n 1 124 LEU n 1 125 MET n 1 126 GLU n 1 127 ALA n 1 128 ALA n 1 129 LEU n 1 130 LEU n 1 131 ALA n 1 132 ASP n 1 133 LYS n 1 134 VAL n 1 135 GLY n 1 136 LEU n 1 137 LEU n 1 138 THR n 1 139 ASP n 1 140 GLY n 1 141 LYS n 1 142 LYS n 1 143 ARG n 1 144 THR n 1 145 ILE n 1 146 LEU n 1 147 ALA n 1 148 GLU n 1 149 ASN n 1 150 VAL n 1 151 ARG n 1 152 GLU n 1 153 CYS n 1 154 LEU n 1 155 LYS n 1 156 LYS n 1 157 LEU n 1 158 GLY n 1 159 HIS n 1 160 VAL n 1 161 VAL n 1 162 SER n 1 163 ALA n 1 164 ALA n 1 165 LEU n 1 166 GLU n 1 167 HIS n 1 168 HIS n 1 169 HIS n 1 170 HIS n 1 171 HIS n 1 172 HIS n 2 1 DT n 2 2 DC n 2 3 DA n 2 4 DA n 2 5 DA n 2 6 DA n 2 7 DC n 2 8 DG n 2 9 DT n 2 10 DC n 2 11 DG n 2 12 DT n 2 13 DA n 2 14 DC n 2 15 DG n 2 16 DA n 2 17 DC n 2 18 DG n 2 19 DT n 2 20 DT n 2 21 DT n 2 22 DT n 2 23 DG n 2 24 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'CHLORELLA VULGARIS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3077 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant 'ROSETTA PLYSS' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET24D _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'SYNTHETIC CONSTRUCT' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 2 ? ? ? A . n A 1 2 GLN 2 3 ? ? ? A . n A 1 3 PRO 3 4 ? ? ? A . n A 1 4 THR 4 5 ? ? ? A . n A 1 5 ASN 5 6 6 ASN ASN A . n A 1 6 PHE 6 7 7 PHE PHE A . n A 1 7 HIS 7 8 8 HIS HIS A . n A 1 8 ASP 8 9 9 ASP ASP A . n A 1 9 GLN 9 10 10 GLN GLN A . n A 1 10 LEU 10 11 11 LEU LEU A . n A 1 11 LYS 11 12 12 LYS LYS A . n A 1 12 PHE 12 13 13 PHE PHE A . n A 1 13 ALA 13 14 14 ALA ALA A . n A 1 14 TRP 14 15 15 TRP TRP A . n A 1 15 LEU 15 16 16 LEU LEU A . n A 1 16 ALA 16 17 17 ALA ALA A . n A 1 17 GLY 17 18 18 GLY GLY A . n A 1 18 PHE 18 19 19 PHE PHE A . n A 1 19 VAL 19 20 20 VAL VAL A . n A 1 20 ASP 20 21 21 ASP ASP A . n A 1 21 ALA 21 22 22 ALA ALA A . n A 1 22 ASP 22 23 23 ASP ASP A . n A 1 23 GLY 23 24 24 GLY GLY A . n A 1 24 CYS 24 25 25 CYS CYS A . n A 1 25 ILE 25 26 26 ILE ILE A . n A 1 26 ASN 26 27 27 ASN ASN A . n A 1 27 ALA 27 28 28 ALA ALA A . n A 1 28 GLN 28 29 29 GLN GLN A . n A 1 29 ILE 29 30 30 ILE ILE A . n A 1 30 VAL 30 31 31 VAL VAL A . n A 1 31 SER 31 32 32 SER SER A . n A 1 32 ARG 32 33 33 ARG ARG A . n A 1 33 GLU 33 34 34 GLU GLU A . n A 1 34 ASP 34 35 35 ASP ASP A . n A 1 35 TYR 35 36 36 TYR TYR A . n A 1 36 LEU 36 37 37 LEU LEU A . n A 1 37 LEU 37 38 38 LEU LEU A . n A 1 38 LYS 38 39 39 LYS LYS A . n A 1 39 TYR 39 40 40 TYR TYR A . n A 1 40 GLN 40 41 41 GLN GLN A . n A 1 41 VAL 41 42 42 VAL VAL A . n A 1 42 ARG 42 43 43 ARG ARG A . n A 1 43 VAL 43 44 44 VAL VAL A . n A 1 44 SER 44 45 45 SER SER A . n A 1 45 LEU 45 46 46 LEU LEU A . n A 1 46 THR 46 47 47 THR THR A . n A 1 47 VAL 47 48 48 VAL VAL A . n A 1 48 PHE 48 49 49 PHE PHE A . n A 1 49 GLN 49 50 50 GLN GLN A . n A 1 50 SER 50 51 51 SER SER A . n A 1 51 THR 51 52 52 THR THR A . n A 1 52 THR 52 53 53 THR THR A . n A 1 53 GLN 53 54 54 GLN GLN A . n A 1 54 HIS 54 55 55 HIS HIS A . n A 1 55 PHE 55 56 56 PHE PHE A . n A 1 56 ILE 56 57 57 ILE ILE A . n A 1 57 LEU 57 58 58 LEU LEU A . n A 1 58 LEU 58 59 59 LEU LEU A . n A 1 59 ASP 59 60 60 ASP ASP A . n A 1 60 ILE 60 61 61 ILE ILE A . n A 1 61 GLN 61 62 62 GLN GLN A . n A 1 62 LYS 62 63 63 LYS LYS A . n A 1 63 ILE 63 64 64 ILE ILE A . n A 1 64 LEU 64 65 65 LEU LEU A . n A 1 65 GLY 65 66 66 GLY GLY A . n A 1 66 CYS 66 67 67 CYS CYS A . n A 1 67 GLY 67 68 68 GLY GLY A . n A 1 68 THR 68 69 69 THR THR A . n A 1 69 VAL 69 70 70 VAL VAL A . n A 1 70 ARG 70 71 71 ARG ARG A . n A 1 71 LYS 71 72 72 LYS LYS A . n A 1 72 ARG 72 73 73 ARG ARG A . n A 1 73 ASN 73 74 74 ASN ASN A . n A 1 74 ASP 74 75 75 ASP ASP A . n A 1 75 GLY 75 76 76 GLY GLY A . n A 1 76 MET 76 77 77 MET MET A . n A 1 77 SER 77 78 78 SER SER A . n A 1 78 GLU 78 79 79 GLU GLU A . n A 1 79 PHE 79 80 80 PHE PHE A . n A 1 80 CYS 80 81 81 CYS CYS A . n A 1 81 VAL 81 82 82 VAL VAL A . n A 1 82 VAL 82 83 83 VAL VAL A . n A 1 83 GLY 83 84 84 GLY GLY A . n A 1 84 GLY 84 85 85 GLY GLY A . n A 1 85 THR 85 86 86 THR THR A . n A 1 86 SER 86 87 87 SER SER A . n A 1 87 LEU 87 88 88 LEU LEU A . n A 1 88 GLN 88 89 89 GLN GLN A . n A 1 89 THR 89 90 90 THR THR A . n A 1 90 THR 90 91 91 THR THR A . n A 1 91 LEU 91 92 92 LEU LEU A . n A 1 92 GLU 92 93 93 GLU GLU A . n A 1 93 LYS 93 94 94 LYS LYS A . n A 1 94 LEU 94 95 95 LEU LEU A . n A 1 95 LEU 95 96 96 LEU LEU A . n A 1 96 PRO 96 97 97 PRO PRO A . n A 1 97 TYR 97 98 98 TYR TYR A . n A 1 98 LEU 98 99 99 LEU LEU A . n A 1 99 GLN 99 100 100 GLN GLN A . n A 1 100 LEU 100 101 101 LEU LEU A . n A 1 101 LYS 101 102 102 LYS LYS A . n A 1 102 ARG 102 103 103 ARG ARG A . n A 1 103 ALA 103 104 104 ALA ALA A . n A 1 104 GLN 104 105 105 GLN GLN A . n A 1 105 ALA 105 106 106 ALA ALA A . n A 1 106 LYS 106 107 107 LYS LYS A . n A 1 107 LEU 107 108 108 LEU LEU A . n A 1 108 VAL 108 109 109 VAL VAL A . n A 1 109 LEU 109 110 110 LEU LEU A . n A 1 110 GLN 110 111 111 GLN GLN A . n A 1 111 ILE 111 112 112 ILE ILE A . n A 1 112 ILE 112 113 113 ILE ILE A . n A 1 113 LYS 113 114 114 LYS LYS A . n A 1 114 LYS 114 115 115 LYS LYS A . n A 1 115 LEU 115 116 116 LEU LEU A . n A 1 116 PRO 116 117 117 PRO PRO A . n A 1 117 ASN 117 118 118 ASN ASN A . n A 1 118 THR 118 119 119 THR THR A . n A 1 119 LYS 119 120 120 LYS LYS A . n A 1 120 ASP 120 121 121 ASP ASP A . n A 1 121 PRO 121 122 122 PRO PRO A . n A 1 122 SER 122 123 123 SER SER A . n A 1 123 VAL 123 124 124 VAL VAL A . n A 1 124 LEU 124 125 125 LEU LEU A . n A 1 125 MET 125 126 126 MET MET A . n A 1 126 GLU 126 127 127 GLU GLU A . n A 1 127 ALA 127 128 128 ALA ALA A . n A 1 128 ALA 128 129 129 ALA ALA A . n A 1 129 LEU 129 130 130 LEU LEU A . n A 1 130 LEU 130 131 131 LEU LEU A . n A 1 131 ALA 131 132 132 ALA ALA A . n A 1 132 ASP 132 133 133 ASP ASP A . n A 1 133 LYS 133 134 134 LYS LYS A . n A 1 134 VAL 134 135 135 VAL VAL A . n A 1 135 GLY 135 136 136 GLY GLY A . n A 1 136 LEU 136 137 137 LEU LEU A . n A 1 137 LEU 137 138 138 LEU LEU A . n A 1 138 THR 138 139 139 THR THR A . n A 1 139 ASP 139 140 140 ASP ASP A . n A 1 140 GLY 140 141 141 GLY GLY A . n A 1 141 LYS 141 142 142 LYS LYS A . n A 1 142 LYS 142 143 143 LYS LYS A . n A 1 143 ARG 143 144 144 ARG ARG A . n A 1 144 THR 144 145 145 THR THR A . n A 1 145 ILE 145 146 146 ILE ILE A . n A 1 146 LEU 146 147 147 LEU LEU A . n A 1 147 ALA 147 148 148 ALA ALA A . n A 1 148 GLU 148 149 149 GLU GLU A . n A 1 149 ASN 149 150 150 ASN ASN A . n A 1 150 VAL 150 151 151 VAL VAL A . n A 1 151 ARG 151 152 152 ARG ARG A . n A 1 152 GLU 152 153 153 GLU GLU A . n A 1 153 CYS 153 154 154 CYS CYS A . n A 1 154 LEU 154 155 155 LEU LEU A . n A 1 155 LYS 155 156 156 LYS LYS A . n A 1 156 LYS 156 157 157 LYS LYS A . n A 1 157 LEU 157 158 158 LEU LEU A . n A 1 158 GLY 158 159 159 GLY GLY A . n A 1 159 HIS 159 160 160 HIS HIS A . n A 1 160 VAL 160 161 161 VAL VAL A . n A 1 161 VAL 161 162 162 VAL VAL A . n A 1 162 SER 162 163 ? ? ? A . n A 1 163 ALA 163 164 ? ? ? A . n A 1 164 ALA 164 165 ? ? ? A . n A 1 165 LEU 165 166 ? ? ? A . n A 1 166 GLU 166 167 ? ? ? A . n A 1 167 HIS 167 168 ? ? ? A . n A 1 168 HIS 168 169 ? ? ? A . n A 1 169 HIS 169 170 ? ? ? A . n A 1 170 HIS 170 171 ? ? ? A . n A 1 171 HIS 171 172 ? ? ? A . n A 1 172 HIS 172 173 ? ? ? A . n B 1 1 ALA 1 2 ? ? ? B . n B 1 2 GLN 2 3 ? ? ? B . n B 1 3 PRO 3 4 ? ? ? B . n B 1 4 THR 4 5 ? ? ? B . n B 1 5 ASN 5 6 6 ASN ASN B . n B 1 6 PHE 6 7 7 PHE PHE B . n B 1 7 HIS 7 8 8 HIS HIS B . n B 1 8 ASP 8 9 9 ASP ASP B . n B 1 9 GLN 9 10 10 GLN GLN B . n B 1 10 LEU 10 11 11 LEU LEU B . n B 1 11 LYS 11 12 12 LYS LYS B . n B 1 12 PHE 12 13 13 PHE PHE B . n B 1 13 ALA 13 14 14 ALA ALA B . n B 1 14 TRP 14 15 15 TRP TRP B . n B 1 15 LEU 15 16 16 LEU LEU B . n B 1 16 ALA 16 17 17 ALA ALA B . n B 1 17 GLY 17 18 18 GLY GLY B . n B 1 18 PHE 18 19 19 PHE PHE B . n B 1 19 VAL 19 20 20 VAL VAL B . n B 1 20 ASP 20 21 21 ASP ASP B . n B 1 21 ALA 21 22 22 ALA ALA B . n B 1 22 ASP 22 23 23 ASP ASP B . n B 1 23 GLY 23 24 24 GLY GLY B . n B 1 24 CYS 24 25 25 CYS CYS B . n B 1 25 ILE 25 26 26 ILE ILE B . n B 1 26 ASN 26 27 27 ASN ASN B . n B 1 27 ALA 27 28 28 ALA ALA B . n B 1 28 GLN 28 29 29 GLN GLN B . n B 1 29 ILE 29 30 30 ILE ILE B . n B 1 30 VAL 30 31 31 VAL VAL B . n B 1 31 SER 31 32 32 SER SER B . n B 1 32 ARG 32 33 33 ARG ARG B . n B 1 33 GLU 33 34 34 GLU GLU B . n B 1 34 ASP 34 35 35 ASP ASP B . n B 1 35 TYR 35 36 36 TYR TYR B . n B 1 36 LEU 36 37 37 LEU LEU B . n B 1 37 LEU 37 38 38 LEU LEU B . n B 1 38 LYS 38 39 39 LYS LYS B . n B 1 39 TYR 39 40 40 TYR TYR B . n B 1 40 GLN 40 41 41 GLN GLN B . n B 1 41 VAL 41 42 42 VAL VAL B . n B 1 42 ARG 42 43 43 ARG ARG B . n B 1 43 VAL 43 44 44 VAL VAL B . n B 1 44 SER 44 45 45 SER SER B . n B 1 45 LEU 45 46 46 LEU LEU B . n B 1 46 THR 46 47 47 THR THR B . n B 1 47 VAL 47 48 48 VAL VAL B . n B 1 48 PHE 48 49 49 PHE PHE B . n B 1 49 GLN 49 50 50 GLN GLN B . n B 1 50 SER 50 51 51 SER SER B . n B 1 51 THR 51 52 52 THR THR B . n B 1 52 THR 52 53 53 THR THR B . n B 1 53 GLN 53 54 54 GLN GLN B . n B 1 54 HIS 54 55 55 HIS HIS B . n B 1 55 PHE 55 56 56 PHE PHE B . n B 1 56 ILE 56 57 57 ILE ILE B . n B 1 57 LEU 57 58 58 LEU LEU B . n B 1 58 LEU 58 59 59 LEU LEU B . n B 1 59 ASP 59 60 60 ASP ASP B . n B 1 60 ILE 60 61 61 ILE ILE B . n B 1 61 GLN 61 62 62 GLN GLN B . n B 1 62 LYS 62 63 63 LYS LYS B . n B 1 63 ILE 63 64 64 ILE ILE B . n B 1 64 LEU 64 65 65 LEU LEU B . n B 1 65 GLY 65 66 66 GLY GLY B . n B 1 66 CYS 66 67 67 CYS CYS B . n B 1 67 GLY 67 68 68 GLY GLY B . n B 1 68 THR 68 69 69 THR THR B . n B 1 69 VAL 69 70 70 VAL VAL B . n B 1 70 ARG 70 71 71 ARG ARG B . n B 1 71 LYS 71 72 72 LYS LYS B . n B 1 72 ARG 72 73 73 ARG ARG B . n B 1 73 ASN 73 74 74 ASN ASN B . n B 1 74 ASP 74 75 75 ASP ASP B . n B 1 75 GLY 75 76 76 GLY GLY B . n B 1 76 MET 76 77 77 MET MET B . n B 1 77 SER 77 78 78 SER SER B . n B 1 78 GLU 78 79 79 GLU GLU B . n B 1 79 PHE 79 80 80 PHE PHE B . n B 1 80 CYS 80 81 81 CYS CYS B . n B 1 81 VAL 81 82 82 VAL VAL B . n B 1 82 VAL 82 83 83 VAL VAL B . n B 1 83 GLY 83 84 84 GLY GLY B . n B 1 84 GLY 84 85 85 GLY GLY B . n B 1 85 THR 85 86 86 THR THR B . n B 1 86 SER 86 87 87 SER SER B . n B 1 87 LEU 87 88 88 LEU LEU B . n B 1 88 GLN 88 89 89 GLN GLN B . n B 1 89 THR 89 90 90 THR THR B . n B 1 90 THR 90 91 91 THR THR B . n B 1 91 LEU 91 92 92 LEU LEU B . n B 1 92 GLU 92 93 93 GLU GLU B . n B 1 93 LYS 93 94 94 LYS LYS B . n B 1 94 LEU 94 95 95 LEU LEU B . n B 1 95 LEU 95 96 96 LEU LEU B . n B 1 96 PRO 96 97 97 PRO PRO B . n B 1 97 TYR 97 98 98 TYR TYR B . n B 1 98 LEU 98 99 99 LEU LEU B . n B 1 99 GLN 99 100 100 GLN GLN B . n B 1 100 LEU 100 101 101 LEU LEU B . n B 1 101 LYS 101 102 102 LYS LYS B . n B 1 102 ARG 102 103 103 ARG ARG B . n B 1 103 ALA 103 104 104 ALA ALA B . n B 1 104 GLN 104 105 105 GLN GLN B . n B 1 105 ALA 105 106 106 ALA ALA B . n B 1 106 LYS 106 107 107 LYS LYS B . n B 1 107 LEU 107 108 108 LEU LEU B . n B 1 108 VAL 108 109 109 VAL VAL B . n B 1 109 LEU 109 110 110 LEU LEU B . n B 1 110 GLN 110 111 111 GLN GLN B . n B 1 111 ILE 111 112 112 ILE ILE B . n B 1 112 ILE 112 113 113 ILE ILE B . n B 1 113 LYS 113 114 114 LYS LYS B . n B 1 114 LYS 114 115 115 LYS LYS B . n B 1 115 LEU 115 116 116 LEU LEU B . n B 1 116 PRO 116 117 117 PRO PRO B . n B 1 117 ASN 117 118 118 ASN ASN B . n B 1 118 THR 118 119 119 THR THR B . n B 1 119 LYS 119 120 120 LYS LYS B . n B 1 120 ASP 120 121 121 ASP ASP B . n B 1 121 PRO 121 122 122 PRO PRO B . n B 1 122 SER 122 123 123 SER SER B . n B 1 123 VAL 123 124 124 VAL VAL B . n B 1 124 LEU 124 125 125 LEU LEU B . n B 1 125 MET 125 126 126 MET MET B . n B 1 126 GLU 126 127 127 GLU GLU B . n B 1 127 ALA 127 128 128 ALA ALA B . n B 1 128 ALA 128 129 129 ALA ALA B . n B 1 129 LEU 129 130 130 LEU LEU B . n B 1 130 LEU 130 131 131 LEU LEU B . n B 1 131 ALA 131 132 132 ALA ALA B . n B 1 132 ASP 132 133 133 ASP ASP B . n B 1 133 LYS 133 134 134 LYS LYS B . n B 1 134 VAL 134 135 135 VAL VAL B . n B 1 135 GLY 135 136 136 GLY GLY B . n B 1 136 LEU 136 137 137 LEU LEU B . n B 1 137 LEU 137 138 138 LEU LEU B . n B 1 138 THR 138 139 139 THR THR B . n B 1 139 ASP 139 140 140 ASP ASP B . n B 1 140 GLY 140 141 141 GLY GLY B . n B 1 141 LYS 141 142 142 LYS LYS B . n B 1 142 LYS 142 143 143 LYS LYS B . n B 1 143 ARG 143 144 144 ARG ARG B . n B 1 144 THR 144 145 145 THR THR B . n B 1 145 ILE 145 146 146 ILE ILE B . n B 1 146 LEU 146 147 147 LEU LEU B . n B 1 147 ALA 147 148 148 ALA ALA B . n B 1 148 GLU 148 149 149 GLU GLU B . n B 1 149 ASN 149 150 150 ASN ASN B . n B 1 150 VAL 150 151 151 VAL VAL B . n B 1 151 ARG 151 152 152 ARG ARG B . n B 1 152 GLU 152 153 153 GLU GLU B . n B 1 153 CYS 153 154 154 CYS CYS B . n B 1 154 LEU 154 155 155 LEU LEU B . n B 1 155 LYS 155 156 156 LYS LYS B . n B 1 156 LYS 156 157 157 LYS LYS B . n B 1 157 LEU 157 158 158 LEU LEU B . n B 1 158 GLY 158 159 159 GLY GLY B . n B 1 159 HIS 159 160 160 HIS HIS B . n B 1 160 VAL 160 161 161 VAL VAL B . n B 1 161 VAL 161 162 162 VAL VAL B . n B 1 162 SER 162 163 163 SER SER B . n B 1 163 ALA 163 164 ? ? ? B . n B 1 164 ALA 164 165 ? ? ? B . n B 1 165 LEU 165 166 ? ? ? B . n B 1 166 GLU 166 167 ? ? ? B . n B 1 167 HIS 167 168 ? ? ? B . n B 1 168 HIS 168 169 ? ? ? B . n B 1 169 HIS 169 170 ? ? ? B . n B 1 170 HIS 170 171 ? ? ? B . n B 1 171 HIS 171 172 ? ? ? B . n B 1 172 HIS 172 173 ? ? ? B . n C 2 1 DT 1 501 501 DT DT C . n C 2 2 DC 2 502 502 DC DC C . n C 2 3 DA 3 503 503 DA DA C . n C 2 4 DA 4 504 504 DA DA C . n C 2 5 DA 5 505 505 DA DA C . n C 2 6 DA 6 506 506 DA DA C . n C 2 7 DC 7 507 507 DC DC C . n C 2 8 DG 8 508 508 DG DG C . n C 2 9 DT 9 509 509 DT DT C . n C 2 10 DC 10 510 510 DC DC C . n C 2 11 DG 11 511 511 DG DG C . n C 2 12 DT 12 512 512 DT DT C . n C 2 13 DA 13 513 513 DA DA C . n C 2 14 DC 14 514 514 DC DC C . n C 2 15 DG 15 515 515 DG DG C . n C 2 16 DA 16 516 516 DA DA C . n C 2 17 DC 17 517 517 DC DC C . n C 2 18 DG 18 518 518 DG DG C . n C 2 19 DT 19 519 519 DT DT C . n C 2 20 DT 20 520 520 DT DT C . n C 2 21 DT 21 521 521 DT DT C . n C 2 22 DT 22 522 522 DT DT C . n C 2 23 DG 23 523 523 DG DG C . n C 2 24 DA 24 524 524 DA DA C . n D 2 1 DT 1 601 601 DT DT D . n D 2 2 DC 2 602 602 DC DC D . n D 2 3 DA 3 603 603 DA DA D . n D 2 4 DA 4 604 604 DA DA D . n D 2 5 DA 5 605 605 DA DA D . n D 2 6 DA 6 606 606 DA DA D . n D 2 7 DC 7 607 607 DC DC D . n D 2 8 DG 8 608 608 DG DG D . n D 2 9 DT 9 609 609 DT DT D . n D 2 10 DC 10 610 610 DC DC D . n D 2 11 DG 11 611 611 DG DG D . n D 2 12 DT 12 612 612 DT DT D . n D 2 13 DA 13 613 613 DA DA D . n D 2 14 DC 14 614 614 DC DC D . n D 2 15 DG 15 615 615 DG DG D . n D 2 16 DA 16 616 616 DA DA D . n D 2 17 DC 17 617 617 DC DC D . n D 2 18 DG 18 618 618 DG DG D . n D 2 19 DT 19 619 619 DT DT D . n D 2 20 DT 20 620 620 DT DT D . n D 2 21 DT 21 621 621 DT DT D . n D 2 22 DT 22 622 622 DT DT D . n D 2 23 DG 23 623 623 DG DG D . n D 2 24 DA 24 624 624 DA DA D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG 1 1164 1164 MG MG B . F 3 MG 1 1625 1625 MG MG D . G 4 HOH 1 2001 2001 HOH HOH A . G 4 HOH 2 2002 2002 HOH HOH A . G 4 HOH 3 2003 2003 HOH HOH A . G 4 HOH 4 2004 2004 HOH HOH A . G 4 HOH 5 2005 2005 HOH HOH A . G 4 HOH 6 2006 2006 HOH HOH A . G 4 HOH 7 2007 2007 HOH HOH A . G 4 HOH 8 2008 2008 HOH HOH A . G 4 HOH 9 2009 2009 HOH HOH A . G 4 HOH 10 2010 2010 HOH HOH A . G 4 HOH 11 2011 2011 HOH HOH A . G 4 HOH 12 2012 2012 HOH HOH A . H 4 HOH 1 2001 2001 HOH HOH B . H 4 HOH 2 2002 2002 HOH HOH B . H 4 HOH 3 2003 2003 HOH HOH B . H 4 HOH 4 2004 2004 HOH HOH B . H 4 HOH 5 2005 2005 HOH HOH B . H 4 HOH 6 2006 2006 HOH HOH B . I 4 HOH 1 2001 2001 HOH HOH C . I 4 HOH 2 2002 2002 HOH HOH C . I 4 HOH 3 2003 2003 HOH HOH C . I 4 HOH 4 2004 2004 HOH HOH C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 5A78 _cell.length_a 48.573 _cell.length_b 95.079 _cell.length_c 52.145 _cell.angle_alpha 90.00 _cell.angle_beta 103.71 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5A78 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 5A78 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_percent_sol 53 _exptl_crystal.description NONE # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength 1.00 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5A78 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 47.54 _reflns.d_resolution_high 2.50 _reflns.number_obs 15872 _reflns.number_all ? _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.10 _reflns.B_iso_Wilson_estimate 36.80 _reflns.pdbx_redundancy 4.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.60 _reflns_shell.percent_possible_all 99.0 _reflns_shell.Rmerge_I_obs 0.41 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.70 _reflns_shell.pdbx_redundancy 4.7 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5A78 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15781 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.28 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 47.539 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs 97.91 _refine.ls_R_factor_obs 0.2219 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2151 _refine.ls_R_factor_R_free 0.2802 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.17 _refine.ls_number_reflns_R_free 3094 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1G9Y' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.34 _refine.pdbx_overall_phase_error 38.50 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2472 _refine_hist.pdbx_number_atoms_nucleic_acid 978 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 3474 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 47.539 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.010 ? ? 3600 'X-RAY DIFFRACTION' ? f_angle_d 1.551 ? ? 5062 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 24.056 ? ? 1416 'X-RAY DIFFRACTION' ? f_chiral_restr 0.082 ? ? 599 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 467 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.5000 2.5391 1222 0.3135 96.00 0.4305 . . 162 . . 'X-RAY DIFFRACTION' . 2.5391 2.5807 1243 0.3107 95.00 0.3794 . . 124 . . 'X-RAY DIFFRACTION' . 2.5807 2.6252 1205 0.2634 96.00 0.4102 . . 135 . . 'X-RAY DIFFRACTION' . 2.6252 2.6729 1290 0.2603 98.00 0.3664 . . 129 . . 'X-RAY DIFFRACTION' . 2.6729 2.7243 1221 0.2865 96.00 0.3943 . . 158 . . 'X-RAY DIFFRACTION' . 2.7243 2.7799 1245 0.2867 99.00 0.3469 . . 140 . . 'X-RAY DIFFRACTION' . 2.7799 2.8404 1264 0.2678 98.00 0.4137 . . 141 . . 'X-RAY DIFFRACTION' . 2.8404 2.9065 1281 0.2680 99.00 0.3923 . . 129 . . 'X-RAY DIFFRACTION' . 2.9065 2.9791 1231 0.2600 98.00 0.4312 . . 144 . . 'X-RAY DIFFRACTION' . 2.9791 3.0597 1301 0.2384 98.00 0.2670 . . 127 . . 'X-RAY DIFFRACTION' . 3.0597 3.1497 1197 0.2305 97.00 0.2969 . . 155 . . 'X-RAY DIFFRACTION' . 3.1497 3.2513 1305 0.2243 98.00 0.3233 . . 144 . . 'X-RAY DIFFRACTION' . 3.2513 3.3675 1208 0.2138 97.00 0.2474 . . 125 . . 'X-RAY DIFFRACTION' . 3.3675 3.5023 1274 0.2287 98.00 0.3024 . . 147 . . 'X-RAY DIFFRACTION' . 3.5023 3.6616 1265 0.2030 99.00 0.3035 . . 138 . . 'X-RAY DIFFRACTION' . 3.6616 3.8546 1262 0.2097 99.00 0.2414 . . 135 . . 'X-RAY DIFFRACTION' . 3.8546 4.0960 1274 0.1835 99.00 0.2775 . . 143 . . 'X-RAY DIFFRACTION' . 4.0960 4.4120 1297 0.1869 99.00 0.2532 . . 142 . . 'X-RAY DIFFRACTION' . 4.4120 4.8556 1267 0.1778 99.00 0.2202 . . 143 . . 'X-RAY DIFFRACTION' . 4.8556 5.5573 1246 0.1980 99.00 0.2508 . . 138 . . 'X-RAY DIFFRACTION' . 5.5573 6.9980 1275 0.2180 99.00 0.2511 . . 146 . . 'X-RAY DIFFRACTION' . 6.9980 47.5481 1264 0.1697 99.00 0.1841 . . 149 . . # _database_PDB_matrix.entry_id 5A78 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 5A78 _struct.title ;Crystal structure of the homing endonuclease I-CvuI in complex with I- CreI target (C1221) in the presence of 2 mM Mg revealing DNA not cleaved ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5A78 _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'HYDROLASE-DNA COMPLEX, GENE TARGETING, GENETICS, PROTEIN-DNA INTERACTION, HOMING ENDONUCLEASES' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP DNE1_CHLVU 1 ? ? P56347 ? 2 PDB 5A78 2 ? ? 5A78 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5A78 A 2 ? 161 ? P56347 2 ? 161 ? 3 162 2 1 5A78 B 2 ? 161 ? P56347 2 ? 161 ? 3 162 3 2 5A78 C 1 ? 24 ? 5A78 501 ? 524 ? 501 524 4 2 5A78 D 1 ? 24 ? 5A78 601 ? 624 ? 601 624 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5A78 ALA A 1 ? UNP P56347 ? ? 'expression tag' 2 1 1 5A78 SER A 162 ? UNP P56347 ? ? 'expression tag' 163 2 1 5A78 ALA A 163 ? UNP P56347 ? ? 'expression tag' 164 3 1 5A78 ALA A 164 ? UNP P56347 ? ? 'expression tag' 165 4 1 5A78 LEU A 165 ? UNP P56347 ? ? 'expression tag' 166 5 1 5A78 GLU A 166 ? UNP P56347 ? ? 'expression tag' 167 6 1 5A78 HIS A 167 ? UNP P56347 ? ? 'expression tag' 168 7 1 5A78 HIS A 168 ? UNP P56347 ? ? 'expression tag' 169 8 1 5A78 HIS A 169 ? UNP P56347 ? ? 'expression tag' 170 9 1 5A78 HIS A 170 ? UNP P56347 ? ? 'expression tag' 171 10 1 5A78 HIS A 171 ? UNP P56347 ? ? 'expression tag' 172 11 1 5A78 HIS A 172 ? UNP P56347 ? ? 'expression tag' 173 12 1 5A78 GLN A 53 ? UNP P56347 ARG 53 conflict 54 13 2 5A78 ALA B 1 ? UNP P56347 ? ? 'expression tag' 2 14 2 5A78 SER B 162 ? UNP P56347 ? ? 'expression tag' 163 15 2 5A78 ALA B 163 ? UNP P56347 ? ? 'expression tag' 164 16 2 5A78 ALA B 164 ? UNP P56347 ? ? 'expression tag' 165 17 2 5A78 LEU B 165 ? UNP P56347 ? ? 'expression tag' 166 18 2 5A78 GLU B 166 ? UNP P56347 ? ? 'expression tag' 167 19 2 5A78 HIS B 167 ? UNP P56347 ? ? 'expression tag' 168 20 2 5A78 HIS B 168 ? UNP P56347 ? ? 'expression tag' 169 21 2 5A78 HIS B 169 ? UNP P56347 ? ? 'expression tag' 170 22 2 5A78 HIS B 170 ? UNP P56347 ? ? 'expression tag' 171 23 2 5A78 HIS B 171 ? UNP P56347 ? ? 'expression tag' 172 24 2 5A78 HIS B 172 ? UNP P56347 ? ? 'expression tag' 173 25 2 5A78 GLN B 53 ? UNP P56347 ARG 53 conflict 54 26 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11040 ? 1 MORE -84.8 ? 1 'SSA (A^2)' 18650 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 5 ? ASP A 22 ? ASN A 6 ASP A 23 1 ? 18 HELX_P HELX_P2 2 HIS A 54 ? GLY A 65 ? HIS A 55 GLY A 66 1 ? 12 HELX_P HELX_P3 3 GLY A 83 ? LEU A 95 ? GLY A 84 LEU A 96 1 ? 13 HELX_P HELX_P4 4 LYS A 101 ? LYS A 113 ? LYS A 102 LYS A 114 1 ? 13 HELX_P HELX_P5 5 LYS A 114 ? THR A 118 ? LYS A 115 THR A 119 5 ? 5 HELX_P HELX_P6 6 ASP A 120 ? LEU A 136 ? ASP A 121 LEU A 137 1 ? 17 HELX_P HELX_P7 7 LEU A 146 ? LEU A 157 ? LEU A 147 LEU A 158 1 ? 12 HELX_P HELX_P8 8 ASN B 5 ? ASP B 22 ? ASN B 6 ASP B 23 1 ? 18 HELX_P HELX_P9 9 HIS B 54 ? GLY B 65 ? HIS B 55 GLY B 66 1 ? 12 HELX_P HELX_P10 10 GLY B 83 ? LEU B 95 ? GLY B 84 LEU B 96 1 ? 13 HELX_P HELX_P11 11 LYS B 101 ? LEU B 115 ? LYS B 102 LEU B 116 1 ? 15 HELX_P HELX_P12 12 PRO B 116 ? THR B 118 ? PRO B 117 THR B 119 5 ? 3 HELX_P HELX_P13 13 ASP B 120 ? LEU B 137 ? ASP B 121 LEU B 138 1 ? 18 HELX_P HELX_P14 14 LEU B 146 ? LEU B 157 ? LEU B 147 LEU B 158 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ALA 21 O ? ? ? 1_555 F MG . MG ? ? A ALA 22 D MG 1625 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc2 metalc ? ? A ASP 22 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 23 B MG 1164 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc3 metalc ? ? G HOH . O ? ? ? 1_555 E MG . MG ? ? A HOH 2009 B MG 1164 1_555 ? ? ? ? ? ? ? 2.557 ? ? metalc4 metalc ? ? B ALA 21 O ? ? ? 1_555 E MG . MG ? ? B ALA 22 B MG 1164 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc5 metalc ? ? B ASP 22 OD2 ? ? ? 1_555 F MG . MG ? ? B ASP 23 D MG 1625 1_555 ? ? ? ? ? ? ? 2.908 ? ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 C DC 14 OP1 ? ? B MG 1164 C DC 514 1_555 ? ? ? ? ? ? ? 2.116 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 D DG 15 OP2 ? ? B MG 1164 D DG 615 1_555 ? ? ? ? ? ? ? 2.910 ? ? metalc8 metalc ? ? D DC 14 OP1 ? ? ? 1_555 F MG . MG ? ? D DC 614 D MG 1625 1_555 ? ? ? ? ? ? ? 2.153 ? ? hydrog1 hydrog ? ? C DT 1 N3 ? ? ? 1_555 D DA 24 N1 ? ? C DT 501 D DA 624 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DT 1 O4 ? ? ? 1_555 D DA 24 N6 ? ? C DT 501 D DA 624 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 23 N1 ? ? C DC 502 D DG 623 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 23 O6 ? ? C DC 502 D DG 623 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 23 N2 ? ? C DC 502 D DG 623 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 22 N3 ? ? C DA 503 D DT 622 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 22 O4 ? ? C DA 503 D DT 622 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 21 N3 ? ? C DA 504 D DT 621 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 21 O4 ? ? C DA 504 D DT 621 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 20 N3 ? ? C DA 505 D DT 620 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 20 O4 ? ? C DA 505 D DT 620 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 19 N3 ? ? C DA 506 D DT 619 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 19 O4 ? ? C DA 506 D DT 619 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 18 N1 ? ? C DC 507 D DG 618 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 18 O6 ? ? C DC 507 D DG 618 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 18 N2 ? ? C DC 507 D DG 618 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 17 N3 ? ? C DG 508 D DC 617 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 17 O2 ? ? C DG 508 D DC 617 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 17 N4 ? ? C DG 508 D DC 617 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 16 N1 ? ? C DT 509 D DA 616 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 16 N6 ? ? C DT 509 D DA 616 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 15 N1 ? ? C DC 510 D DG 615 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 15 O6 ? ? C DC 510 D DG 615 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 15 N2 ? ? C DC 510 D DG 615 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 14 N3 ? ? C DG 511 D DC 614 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 14 O2 ? ? C DG 511 D DC 614 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 14 N4 ? ? C DG 511 D DC 614 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 13 N1 ? ? C DT 512 D DA 613 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 13 N6 ? ? C DT 512 D DA 613 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DA 13 N1 ? ? ? 1_555 D DT 12 N3 ? ? C DA 513 D DT 612 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 13 N6 ? ? ? 1_555 D DT 12 O4 ? ? C DA 513 D DT 612 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 14 N3 ? ? ? 1_555 D DG 11 N1 ? ? C DC 514 D DG 611 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 14 N4 ? ? ? 1_555 D DG 11 O6 ? ? C DC 514 D DG 611 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 14 O2 ? ? ? 1_555 D DG 11 N2 ? ? C DC 514 D DG 611 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 15 N1 ? ? ? 1_555 D DC 10 N3 ? ? C DG 515 D DC 610 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 15 N2 ? ? ? 1_555 D DC 10 O2 ? ? C DG 515 D DC 610 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 15 O6 ? ? ? 1_555 D DC 10 N4 ? ? C DG 515 D DC 610 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DA 16 N1 ? ? ? 1_555 D DT 9 N3 ? ? C DA 516 D DT 609 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 16 N6 ? ? ? 1_555 D DT 9 O4 ? ? C DA 516 D DT 609 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 17 N3 ? ? ? 1_555 D DG 8 N1 ? ? C DC 517 D DG 608 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 17 N4 ? ? ? 1_555 D DG 8 O6 ? ? C DC 517 D DG 608 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 17 O2 ? ? ? 1_555 D DG 8 N2 ? ? C DC 517 D DG 608 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DG 18 N1 ? ? ? 1_555 D DC 7 N3 ? ? C DG 518 D DC 607 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DG 18 N2 ? ? ? 1_555 D DC 7 O2 ? ? C DG 518 D DC 607 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DG 18 O6 ? ? ? 1_555 D DC 7 N4 ? ? C DG 518 D DC 607 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DT 19 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 519 D DA 606 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DT 19 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT 519 D DA 606 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DT 20 N3 ? ? ? 1_555 D DA 5 N1 ? ? C DT 520 D DA 605 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DT 20 O4 ? ? ? 1_555 D DA 5 N6 ? ? C DT 520 D DA 605 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DT 21 N3 ? ? ? 1_555 D DA 4 N1 ? ? C DT 521 D DA 604 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DT 21 O4 ? ? ? 1_555 D DA 4 N6 ? ? C DT 521 D DA 604 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DT 22 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 522 D DA 603 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DT 22 O4 ? ? ? 1_555 D DA 3 N6 ? ? C DT 522 D DA 603 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DG 23 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 523 D DC 602 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C DG 23 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 523 D DC 602 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DG 23 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 523 D DC 602 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C DA 24 N1 ? ? ? 1_555 D DT 1 N3 ? ? C DA 524 D DT 601 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C DA 24 N6 ? ? ? 1_555 D DT 1 O4 ? ? C DA 524 D DT 601 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ALA 21 ? A ALA 22 ? 1_555 MG ? F MG . ? D MG 1625 ? 1_555 OD2 ? B ASP 22 ? B ASP 23 ? 1_555 82.5 ? 2 O ? A ALA 21 ? A ALA 22 ? 1_555 MG ? F MG . ? D MG 1625 ? 1_555 OP1 ? D DC 14 ? D DC 614 ? 1_555 133.0 ? 3 OD2 ? B ASP 22 ? B ASP 23 ? 1_555 MG ? F MG . ? D MG 1625 ? 1_555 OP1 ? D DC 14 ? D DC 614 ? 1_555 90.7 ? 4 OD2 ? A ASP 22 ? A ASP 23 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 O ? G HOH . ? A HOH 2009 ? 1_555 97.1 ? 5 OD2 ? A ASP 22 ? A ASP 23 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 O ? B ALA 21 ? B ALA 22 ? 1_555 69.6 ? 6 O ? G HOH . ? A HOH 2009 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 O ? B ALA 21 ? B ALA 22 ? 1_555 67.4 ? 7 OD2 ? A ASP 22 ? A ASP 23 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 OP1 ? C DC 14 ? C DC 514 ? 1_555 105.0 ? 8 O ? G HOH . ? A HOH 2009 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 OP1 ? C DC 14 ? C DC 514 ? 1_555 105.3 ? 9 O ? B ALA 21 ? B ALA 22 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 OP1 ? C DC 14 ? C DC 514 ? 1_555 169.6 ? 10 OD2 ? A ASP 22 ? A ASP 23 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 OP2 ? D DG 15 ? D DG 615 ? 1_555 85.8 ? 11 O ? G HOH . ? A HOH 2009 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 OP2 ? D DG 15 ? D DG 615 ? 1_555 133.1 ? 12 O ? B ALA 21 ? B ALA 22 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 OP2 ? D DG 15 ? D DG 615 ? 1_555 70.2 ? 13 OP1 ? C DC 14 ? C DC 514 ? 1_555 MG ? E MG . ? B MG 1164 ? 1_555 OP2 ? D DG 15 ? D DG 615 ? 1_555 119.1 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? BA ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 23 ? SER A 31 ? GLY A 24 SER A 32 AA 2 TYR A 39 ? SER A 50 ? TYR A 40 SER A 51 AA 3 MET A 76 ? VAL A 82 ? MET A 77 VAL A 83 AA 4 THR A 68 ? LYS A 71 ? THR A 69 LYS A 72 BA 1 GLY B 23 ? SER B 31 ? GLY B 24 SER B 32 BA 2 TYR B 39 ? SER B 50 ? TYR B 40 SER B 51 BA 3 MET B 76 ? VAL B 82 ? MET B 77 VAL B 83 BA 4 THR B 68 ? LYS B 71 ? THR B 69 LYS B 72 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N VAL A 30 ? N VAL A 31 O GLN A 40 ? O GLN A 41 AA 2 3 N GLN A 49 ? N GLN A 50 O SER A 77 ? O SER A 78 AA 3 4 N CYS A 80 ? N CYS A 81 O THR A 68 ? O THR A 69 BA 1 2 N VAL B 30 ? N VAL B 31 O GLN B 40 ? O GLN B 41 BA 2 3 N GLN B 49 ? N GLN B 50 O SER B 77 ? O SER B 78 BA 3 4 N CYS B 80 ? N CYS B 81 O THR B 68 ? O THR B 69 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software D MG 1625 ? 5 'BINDING SITE FOR RESIDUE MG D 1625' AC2 Software B MG 1164 ? 5 'BINDING SITE FOR RESIDUE MG B 1164' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ALA A 21 ? ALA A 22 . ? 1_555 ? 2 AC1 5 ASP A 22 ? ASP A 23 . ? 1_555 ? 3 AC1 5 ASP B 22 ? ASP B 23 . ? 1_555 ? 4 AC1 5 DG C 15 ? DG C 515 . ? 1_555 ? 5 AC1 5 DC D 14 ? DC D 614 . ? 1_555 ? 6 AC2 5 ASP A 22 ? ASP A 23 . ? 1_555 ? 7 AC2 5 HOH G . ? HOH A 2009 . ? 1_555 ? 8 AC2 5 ALA B 21 ? ALA B 22 . ? 1_555 ? 9 AC2 5 DC C 14 ? DC C 514 . ? 1_555 ? 10 AC2 5 DG D 15 ? DG D 615 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ B LYS 143 ? ? N2 D DG 615 ? ? 1.26 2 1 NZ A LYS 143 ? ? N2 C DG 515 ? ? 1.64 3 1 O2 C DC 502 ? ? O C HOH 2001 ? ? 2.00 4 1 O A ASP 21 ? ? O A HOH 2002 ? ? 2.01 5 1 OD2 A ASP 75 ? ? O A HOH 2011 ? ? 2.04 6 1 ND2 A ASN 6 ? ? OD1 A ASP 9 ? ? 2.12 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NZ _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 LYS _pdbx_validate_symm_contact.auth_seq_id_1 157 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OP1 _pdbx_validate_symm_contact.auth_asym_id_2 D _pdbx_validate_symm_contact.auth_comp_id_2 DT _pdbx_validate_symm_contact.auth_seq_id_2 620 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_445 _pdbx_validate_symm_contact.dist 2.15 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 515 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 515 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.380 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.039 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A LYS 142 ? ? CA A LYS 142 ? ? CB A LYS 142 ? ? 98.93 110.60 -11.67 1.80 N 2 1 C B ILE 57 ? ? N B LEU 58 ? ? CA B LEU 58 ? ? 106.19 121.70 -15.51 2.50 Y 3 1 CB B ASP 140 ? ? CA B ASP 140 ? ? C B ASP 140 ? ? 92.07 110.40 -18.33 2.00 N 4 1 N B GLY 141 ? ? CA B GLY 141 ? ? C B GLY 141 ? ? 80.12 113.10 -32.98 2.50 N 5 1 N B LYS 142 ? ? CA B LYS 142 ? ? C B LYS 142 ? ? 81.33 111.00 -29.67 2.70 N 6 1 "O4'" C DA 503 ? ? "C1'" C DA 503 ? ? N9 C DA 503 ? ? 110.89 108.30 2.59 0.30 N 7 1 "C3'" C DC 514 ? ? "C2'" C DC 514 ? ? "C1'" C DC 514 ? ? 97.29 102.40 -5.11 0.80 N 8 1 "O4'" C DC 514 ? ? "C1'" C DC 514 ? ? N1 C DC 514 ? ? 111.57 108.30 3.27 0.30 N 9 1 "O4'" C DA 516 ? ? "C1'" C DA 516 ? ? N9 C DA 516 ? ? 110.20 108.30 1.90 0.30 N 10 1 "O4'" C DG 523 ? ? "C1'" C DG 523 ? ? N9 C DG 523 ? ? 111.91 108.30 3.61 0.30 N 11 1 "O4'" D DC 614 ? ? "C1'" D DC 614 ? ? N1 D DC 614 ? ? 111.33 108.30 3.03 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 25 ? ? -165.46 101.35 2 1 LYS A 39 ? ? 54.12 14.31 3 1 LEU A 96 ? ? -36.09 -38.88 4 1 GLN A 100 ? ? -129.36 -73.83 5 1 ASP A 140 ? ? -55.60 -2.71 6 1 LYS A 142 ? ? -148.81 34.09 7 1 LYS B 39 ? ? 70.09 -12.79 8 1 LYS B 142 ? ? -143.86 44.17 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 2 ? A ALA 1 2 1 Y 1 A GLN 3 ? A GLN 2 3 1 Y 1 A PRO 4 ? A PRO 3 4 1 Y 1 A THR 5 ? A THR 4 5 1 Y 1 A SER 163 ? A SER 162 6 1 Y 1 A ALA 164 ? A ALA 163 7 1 Y 1 A ALA 165 ? A ALA 164 8 1 Y 1 A LEU 166 ? A LEU 165 9 1 Y 1 A GLU 167 ? A GLU 166 10 1 Y 1 A HIS 168 ? A HIS 167 11 1 Y 1 A HIS 169 ? A HIS 168 12 1 Y 1 A HIS 170 ? A HIS 169 13 1 Y 1 A HIS 171 ? A HIS 170 14 1 Y 1 A HIS 172 ? A HIS 171 15 1 Y 1 A HIS 173 ? A HIS 172 16 1 Y 1 B ALA 2 ? B ALA 1 17 1 Y 1 B GLN 3 ? B GLN 2 18 1 Y 1 B PRO 4 ? B PRO 3 19 1 Y 1 B THR 5 ? B THR 4 20 1 Y 1 B ALA 164 ? B ALA 163 21 1 Y 1 B ALA 165 ? B ALA 164 22 1 Y 1 B LEU 166 ? B LEU 165 23 1 Y 1 B GLU 167 ? B GLU 166 24 1 Y 1 B HIS 168 ? B HIS 167 25 1 Y 1 B HIS 169 ? B HIS 168 26 1 Y 1 B HIS 170 ? B HIS 169 27 1 Y 1 B HIS 171 ? B HIS 170 28 1 Y 1 B HIS 172 ? B HIS 171 29 1 Y 1 B HIS 173 ? B HIS 172 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 MG MG MG N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5A78 'double helix' 5A78 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DT 1 1_555 D DA 24 1_555 -0.136 -0.206 -0.404 3.392 -8.579 -7.178 1 C_DT501:DA624_D C 501 ? D 624 ? 20 1 1 C DC 2 1_555 D DG 23 1_555 0.435 -0.253 -0.117 -4.744 -7.430 2.716 2 C_DC502:DG623_D C 502 ? D 623 ? 19 1 1 C DA 3 1_555 D DT 22 1_555 -0.006 -0.202 0.103 11.443 3.379 1.203 3 C_DA503:DT622_D C 503 ? D 622 ? 20 1 1 C DA 4 1_555 D DT 21 1_555 -0.374 -0.338 0.473 19.289 -10.602 -1.632 4 C_DA504:DT621_D C 504 ? D 621 ? 20 1 1 C DA 5 1_555 D DT 20 1_555 0.324 0.070 0.332 7.509 -18.554 5.779 5 C_DA505:DT620_D C 505 ? D 620 ? 20 1 1 C DA 6 1_555 D DT 19 1_555 0.586 -0.069 0.159 8.898 -8.569 6.025 6 C_DA506:DT619_D C 506 ? D 619 ? 20 1 1 C DC 7 1_555 D DG 18 1_555 0.719 -0.147 0.244 -15.141 -5.331 6.129 7 C_DC507:DG618_D C 507 ? D 618 ? 19 1 1 C DG 8 1_555 D DC 17 1_555 0.331 0.037 0.418 3.142 -9.242 0.085 8 C_DG508:DC617_D C 508 ? D 617 ? 19 1 1 C DT 9 1_555 D DA 16 1_555 -0.026 -0.212 -0.203 1.633 -7.798 -2.553 9 C_DT509:DA616_D C 509 ? D 616 ? 20 1 1 C DC 10 1_555 D DG 15 1_555 0.289 -0.054 0.385 4.832 -16.571 2.185 10 C_DC510:DG615_D C 510 ? D 615 ? 19 1 1 C DG 11 1_555 D DC 14 1_555 -0.789 -0.270 0.971 16.723 -9.895 -2.678 11 C_DG511:DC614_D C 511 ? D 614 ? 19 1 1 C DT 12 1_555 D DA 13 1_555 -0.364 0.097 0.498 7.476 -18.530 1.663 12 C_DT512:DA613_D C 512 ? D 613 ? 20 1 1 C DA 13 1_555 D DT 12 1_555 0.248 0.051 0.533 -5.960 -24.564 4.208 13 C_DA513:DT612_D C 513 ? D 612 ? 20 1 1 C DC 14 1_555 D DG 11 1_555 0.751 -0.645 0.806 -18.244 -8.085 -7.767 14 C_DC514:DG611_D C 514 ? D 611 ? 19 1 1 C DG 15 1_555 D DC 10 1_555 0.289 -0.116 0.255 -6.853 -12.565 -5.573 15 C_DG515:DC610_D C 515 ? D 610 ? 19 1 1 C DA 16 1_555 D DT 9 1_555 0.226 -0.064 -0.072 -0.654 -6.581 -1.332 16 C_DA516:DT609_D C 516 ? D 609 ? 20 1 1 C DC 17 1_555 D DG 8 1_555 -0.239 -0.062 0.410 -4.647 -8.842 -2.171 17 C_DC517:DG608_D C 517 ? D 608 ? 19 1 1 C DG 18 1_555 D DC 7 1_555 -0.394 -0.136 0.038 10.477 -10.208 5.119 18 C_DG518:DC607_D C 518 ? D 607 ? 19 1 1 C DT 19 1_555 D DA 6 1_555 -0.197 -0.093 0.176 -9.176 -7.548 7.069 19 C_DT519:DA606_D C 519 ? D 606 ? 20 1 1 C DT 20 1_555 D DA 5 1_555 0.007 0.179 0.309 -10.545 -13.886 6.361 20 C_DT520:DA605_D C 520 ? D 605 ? 20 1 1 C DT 21 1_555 D DA 4 1_555 0.259 -0.262 0.422 -17.785 -15.293 -0.550 21 C_DT521:DA604_D C 521 ? D 604 ? 20 1 1 C DT 22 1_555 D DA 3 1_555 -0.318 -0.234 0.121 -11.961 4.279 2.864 22 C_DT522:DA603_D C 522 ? D 603 ? 20 1 1 C DG 23 1_555 D DC 2 1_555 0.272 -0.160 -0.359 -0.325 0.723 -1.784 23 C_DG523:DC602_D C 523 ? D 602 ? 19 1 1 C DA 24 1_555 D DT 1 1_555 -0.152 -0.127 -0.271 -0.632 -9.575 -2.964 24 C_DA524:DT601_D C 524 ? D 601 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DT 1 1_555 D DA 24 1_555 C DC 2 1_555 D DG 23 1_555 0.912 -0.239 3.504 -0.498 -2.186 40.700 -0.085 -1.369 3.501 -3.140 0.715 40.759 1 CC_DT501DC502:DG623DA624_DD C 501 ? D 624 ? C 502 ? D 623 ? 1 C DC 2 1_555 D DG 23 1_555 C DA 3 1_555 D DT 22 1_555 -0.448 -0.762 2.895 -0.111 11.072 21.100 -4.871 1.056 2.222 27.895 0.280 23.800 2 CC_DC502DA503:DT622DG623_DD C 502 ? D 623 ? C 503 ? D 622 ? 1 C DA 3 1_555 D DT 22 1_555 C DA 4 1_555 D DT 21 1_555 -0.396 -0.172 3.258 -2.397 -12.616 36.098 1.343 0.300 3.160 -19.611 3.726 38.243 3 CC_DA503DA504:DT621DT622_DD C 503 ? D 622 ? C 504 ? D 621 ? 1 C DA 4 1_555 D DT 21 1_555 C DA 5 1_555 D DT 20 1_555 0.127 -0.561 3.435 0.641 -3.490 43.715 -0.401 -0.106 3.469 -4.677 -0.859 43.852 4 CC_DA504DA505:DT620DT621_DD C 504 ? D 621 ? C 505 ? D 620 ? 1 C DA 5 1_555 D DT 20 1_555 C DA 6 1_555 D DT 19 1_555 0.802 -0.669 3.148 0.224 -1.297 33.600 -0.952 -1.351 3.176 -2.242 -0.387 33.625 5 CC_DA505DA506:DT619DT620_DD C 505 ? D 620 ? C 506 ? D 619 ? 1 C DA 6 1_555 D DT 19 1_555 C DC 7 1_555 D DG 18 1_555 0.326 -1.684 3.804 -1.612 1.657 31.989 -3.390 -0.922 3.694 3.002 2.920 32.071 6 CC_DA506DC507:DG618DT619_DD C 506 ? D 619 ? C 507 ? D 618 ? 1 C DC 7 1_555 D DG 18 1_555 C DG 8 1_555 D DC 17 1_555 -0.901 -0.220 2.949 -1.648 12.349 35.223 -1.814 1.213 2.758 19.664 2.623 37.295 7 CC_DC507DG508:DC617DG618_DD C 507 ? D 618 ? C 508 ? D 617 ? 1 C DG 8 1_555 D DC 17 1_555 C DT 9 1_555 D DA 16 1_555 -0.763 -0.557 3.345 4.805 -2.510 24.596 -0.536 3.173 3.180 -5.801 -11.107 25.177 8 CC_DG508DT509:DA616DC617_DD C 508 ? D 617 ? C 509 ? D 616 ? 1 C DT 9 1_555 D DA 16 1_555 C DC 10 1_555 D DG 15 1_555 -0.689 0.838 3.569 -7.963 -3.523 37.884 1.733 -0.033 3.548 -5.340 12.070 38.836 9 CC_DT509DC510:DG615DA616_DD C 509 ? D 616 ? C 510 ? D 615 ? 1 C DC 10 1_555 D DG 15 1_555 C DG 11 1_555 D DC 14 1_555 0.257 0.140 3.099 -6.649 -1.285 36.580 0.380 -1.236 3.002 -2.027 10.483 37.181 10 CC_DC510DG511:DC614DG615_DD C 510 ? D 615 ? C 511 ? D 614 ? 1 C DG 11 1_555 D DC 14 1_555 C DT 12 1_555 D DA 13 1_555 -0.408 -0.267 3.641 6.412 -4.690 31.004 0.456 2.025 3.491 -8.598 -11.754 31.981 11 CC_DG511DT512:DA613DC614_DD C 511 ? D 614 ? C 512 ? D 613 ? 1 C DT 12 1_555 D DA 13 1_555 C DA 13 1_555 D DT 12 1_555 0.158 2.188 3.568 1.822 -13.576 55.240 3.071 -0.063 3.001 -14.396 -1.932 56.783 12 CC_DT512DA513:DT612DA613_DD C 512 ? D 613 ? C 513 ? D 612 ? 1 C DA 13 1_555 D DT 12 1_555 C DC 14 1_555 D DG 11 1_555 0.127 -0.235 3.847 -7.015 -3.592 31.150 0.333 -1.711 3.733 -6.558 12.808 32.108 13 CC_DA513DC514:DG611DT612_DD C 513 ? D 612 ? C 514 ? D 611 ? 1 C DC 14 1_555 D DG 11 1_555 C DG 15 1_555 D DC 10 1_555 -0.442 0.308 3.058 7.131 -2.461 41.237 0.667 1.304 2.923 -3.459 -10.023 41.892 14 CC_DC514DG515:DC610DG611_DD C 514 ? D 611 ? C 515 ? D 610 ? 1 C DG 15 1_555 D DC 10 1_555 C DA 16 1_555 D DT 9 1_555 1.234 0.583 3.476 7.112 -3.598 35.431 1.485 -0.895 3.575 -5.821 -11.506 36.288 15 CC_DG515DA516:DT609DC610_DD C 515 ? D 610 ? C 516 ? D 609 ? 1 C DA 16 1_555 D DT 9 1_555 C DC 17 1_555 D DG 8 1_555 0.423 -0.576 3.402 -4.743 2.187 24.213 -2.021 -2.455 3.197 5.138 11.141 24.761 16 CC_DA516DC517:DG608DT609_DD C 516 ? D 609 ? C 517 ? D 608 ? 1 C DC 17 1_555 D DG 8 1_555 C DG 18 1_555 D DC 7 1_555 0.905 -0.294 3.124 2.921 9.955 35.167 -1.776 -1.057 2.996 16.050 -4.710 36.619 17 CC_DC517DG518:DC607DG608_DD C 517 ? D 608 ? C 518 ? D 607 ? 1 C DG 18 1_555 D DC 7 1_555 C DT 19 1_555 D DA 6 1_555 -0.288 -1.504 3.687 0.159 0.463 33.509 -2.695 0.529 3.665 0.803 -0.276 33.512 18 CC_DG518DT519:DA606DC607_DD C 518 ? D 607 ? C 519 ? D 606 ? 1 C DT 19 1_555 D DA 6 1_555 C DT 20 1_555 D DA 5 1_555 -0.763 -0.771 3.207 -0.893 0.993 32.859 -1.528 1.199 3.202 1.755 1.577 32.885 19 CC_DT519DT520:DA605DA606_DD C 519 ? D 606 ? C 520 ? D 605 ? 1 C DT 20 1_555 D DA 5 1_555 C DT 21 1_555 D DA 4 1_555 -0.215 -0.648 3.283 -0.299 -3.211 39.379 -0.577 0.282 3.325 -4.756 0.443 39.505 20 CC_DT520DT521:DA604DA605_DD C 520 ? D 605 ? C 521 ? D 604 ? 1 C DT 21 1_555 D DA 4 1_555 C DT 22 1_555 D DA 3 1_555 0.387 -0.066 3.361 1.443 -11.437 36.000 1.429 -0.405 3.244 -17.948 -2.265 37.742 21 CC_DT521DT522:DA603DA604_DD C 521 ? D 604 ? C 522 ? D 603 ? 1 C DT 22 1_555 D DA 3 1_555 C DG 23 1_555 D DC 2 1_555 -0.098 -0.534 3.048 -0.062 13.077 26.998 -3.462 0.179 2.525 26.152 0.125 29.946 22 CC_DT522DG523:DC602DA603_DD C 522 ? D 603 ? C 523 ? D 602 ? 1 C DG 23 1_555 D DC 2 1_555 C DA 24 1_555 D DT 1 1_555 -0.735 -0.363 3.308 -2.857 -5.791 34.955 0.275 0.775 3.371 -9.541 4.707 35.529 23 CC_DG523DA524:DT601DC602_DD C 523 ? D 602 ? C 524 ? D 601 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1G9Y _pdbx_initial_refinement_model.details 'PDB ENTRY 1G9Y' # _atom_sites.entry_id 5A78 _atom_sites.fract_transf_matrix[1][1] 0.020588 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005023 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010518 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019740 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_