HEADER HYDROLASE 16-JUL-15 5A8O TITLE CRYSTAL STRUCTURE OF BETA-GLUCANASE SDGLUC5_26A FROM SACCHAROPHAGUS TITLE 2 DEGRADANS IN COMPLEX WITH CELLOTETRAOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE RETAINING B-GLYCOSIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 SYNONYM: SDGLUC5_26A; COMPND 6 EC: 3.2.1.73; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROPHAGUS DEGRADANS 2-40; SOURCE 3 ORGANISM_TAXID: 203122; SOURCE 4 ATCC: 43961; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PDEST KEYWDS HYDROLASE, CAZYME, GLYCOSIDE HYDROLASE, BETA-GLUCANASE, GH5_26 EXPDTA X-RAY DIFFRACTION AUTHOR G.SULZENBACHER,M.LAFOND,T.FREYD,B.HENRISSAT,R.M.COUTINHO,J.G.BERRIN, AUTHOR 2 M.L.GARRON REVDAT 4 10-JAN-24 5A8O 1 HETSYN REVDAT 3 29-JUL-20 5A8O 1 COMPND REMARK HET HETNAM REVDAT 3 2 1 HETSYN FORMUL LINK SITE REVDAT 3 3 1 ATOM REVDAT 2 06-APR-16 5A8O 1 JRNL REVDAT 1 20-JAN-16 5A8O 0 JRNL AUTH M.LAFOND,G.SULZENBACHER,T.FREYD,B.HENRISSAT,J.G.BERRIN, JRNL AUTH 2 M.L.GARRON JRNL TITL THE QUATERNARY STRUCTURE OF A GLYCOSIDE HYDROLASE DICTATES JRNL TITL 2 SPECIFICITY TOWARDS BETA-GLUCANS JRNL REF J.BIOL.CHEM. V. 291 7183 2016 JRNL REFN ISSN 0021-9258 JRNL PMID 26755730 JRNL DOI 10.1074/JBC.M115.695999 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 21999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1171 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1603 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1940 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2775 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 99 REMARK 3 SOLVENT ATOMS : 291 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.206 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.055 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2992 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2743 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4076 ; 1.191 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6346 ; 0.749 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 345 ; 5.814 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;37.268 ;24.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 471 ;12.520 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;14.347 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 431 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3289 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 711 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 857 ; 0.238 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2538 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1438 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1517 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 84 ; 0.128 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.176 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 44 ; 0.269 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 41 ; 0.150 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.238 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 29 A 364 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0402 54.8978 45.1988 REMARK 3 T TENSOR REMARK 3 T11: 0.0263 T22: 0.0069 REMARK 3 T33: 0.0084 T12: 0.0113 REMARK 3 T13: 0.0075 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.4199 L22: 0.2451 REMARK 3 L33: 0.3366 L12: -0.0054 REMARK 3 L13: -0.1524 L23: -0.1349 REMARK 3 S TENSOR REMARK 3 S11: 0.0258 S12: 0.0014 S13: 0.0369 REMARK 3 S21: 0.0461 S22: 0.0198 S23: 0.0138 REMARK 3 S31: -0.0486 S32: -0.0330 S33: -0.0456 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 5A8O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1290064388. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : DECTRIS P REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23212 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 47.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.50 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5A8N REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULPHATE, 0.1 M SODIUM REMARK 280 CACODYLATE BUFFER PH 6.0, 25% (W/V) PEG 8000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 71.88650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.88650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 71.88650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.88650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 71.88650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 71.88650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 71.88650 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 71.88650 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 71.88650 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 71.88650 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 71.88650 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 71.88650 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 71.88650 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 71.88650 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 71.88650 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 71.88650 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 71.88650 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 71.88650 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 107.82975 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 35.94325 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 35.94325 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 107.82975 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 107.82975 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 107.82975 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 35.94325 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 35.94325 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 107.82975 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 35.94325 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 107.82975 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 35.94325 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 107.82975 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 35.94325 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 35.94325 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 35.94325 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 107.82975 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 35.94325 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 107.82975 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 107.82975 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 107.82975 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 35.94325 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 35.94325 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 107.82975 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 107.82975 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 35.94325 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 35.94325 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 35.94325 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 35.94325 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 107.82975 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 35.94325 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 107.82975 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 35.94325 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 107.82975 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 107.82975 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 107.82975 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -143.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2073 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2143 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2289 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2290 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 THR A 3 REMARK 465 THR A 4 REMARK 465 LYS A 5 REMARK 465 PHE A 6 REMARK 465 LEU A 7 REMARK 465 ALA A 8 REMARK 465 LEU A 9 REMARK 465 ALA A 10 REMARK 465 LEU A 11 REMARK 465 CYS A 12 REMARK 465 LEU A 13 REMARK 465 LEU A 14 REMARK 465 ALA A 15 REMARK 465 SER A 16 REMARK 465 ALA A 17 REMARK 465 SER A 18 REMARK 465 ALA A 19 REMARK 465 LEU A 20 REMARK 465 SER A 21 REMARK 465 ALA A 22 REMARK 465 ASN A 23 REMARK 465 ASN A 24 REMARK 465 SER A 25 REMARK 465 ALA A 26 REMARK 465 PRO A 27 REMARK 465 SER A 28 REMARK 465 ARG A 365 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 38 OD2 ASP A 41 13455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 220 109.62 -163.64 REMARK 500 GLU A 245 56.46 -93.89 REMARK 500 TRP A 278 -35.78 -148.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PGE A 1373 REMARK 610 PGE A 1374 REMARK 610 PGE A 1375 REMARK 610 PGE A 1376 REMARK 610 PGE A 1377 REMARK 610 PGE A 1378 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1367 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 178 O REMARK 620 2 VAL A 181 O 91.3 REMARK 620 3 HOH A2159 O 100.0 93.0 REMARK 620 4 HOH A2163 O 93.5 173.5 90.6 REMARK 620 5 HOH A2166 O 113.0 89.8 146.8 84.2 REMARK 620 N 1 2 3 4 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5A8M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE SELENOMETHIONINE DERIVATIVE OF BETA- REMARK 900 GLUCANASE SDGLUC5_26A FROM SACCHAROPHAGUS DEGRADANS REMARK 900 RELATED ID: 5A8N RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE NATIVE FORM OF BETA-GLUCANASE SDGLUC5_26A REMARK 900 FROM SACCHAROPHAGUS DEGRADANS REMARK 900 RELATED ID: 5A8P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE BETA-GLUCANASE SDGLUC5_26A FROM SACCHAROPHAGUS REMARK 900 DEGRADANS IN COMPLEX WITH TETRASACCHARIDE B REMARK 900 RELATED ID: 5A8Q RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE BETA-GLUCANASE SDGLUC5_26A FROM SACCHAROPHAGUS REMARK 900 DEGRADANS IN COMPLEX WITH TETRASACCHARIDE A OBTAINED BY SOAKING REMARK 900 RELATED ID: 5A94 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE BETA-GLUCANASE SDGLUC5_26A FROM SACCHAROPHAGUS REMARK 900 DEGRADANS IN COMPLEX WITH TETRASACCHARIDE A , FORM 1 DBREF 5A8O A 1 365 UNP Q21KE5 Q21KE5_SACD2 1 365 SEQADV 5A8O ARG A 82 UNP Q21KE5 GLN 82 CLONING ARTIFACT SEQADV 5A8O GLN A 176 UNP Q21KE5 LYS 176 CLONING ARTIFACT SEQADV 5A8O GLN A 291 UNP Q21KE5 GLU 291 ENGINEERED MUTATION SEQRES 1 A 365 MET ARG THR THR LYS PHE LEU ALA LEU ALA LEU CYS LEU SEQRES 2 A 365 LEU ALA SER ALA SER ALA LEU SER ALA ASN ASN SER ALA SEQRES 3 A 365 PRO SER ASN ASP TRP TRP ASP ILE PRO TYR PRO SER GLN SEQRES 4 A 365 PHE ASP VAL LYS SER LEU LYS THR GLN SER PHE ILE SER SEQRES 5 A 365 VAL LYS GLY ASN LYS PHE ILE ASP ASP LYS GLY LYS THR SEQRES 6 A 365 PHE THR PHE ARG GLY VAL ASN ILE ALA ASP THR GLY LYS SEQRES 7 A 365 LEU LEU SER ARG ASN GLN TRP GLN LYS SER LEU PHE GLU SEQRES 8 A 365 GLU LEU ALA ASN ASN TRP GLY VAL ASN THR ILE ARG LEU SEQRES 9 A 365 PRO ILE HIS PRO VAL SER TRP ARG LYS LEU GLY PRO ASP SEQRES 10 A 365 VAL TYR LEU GLY HIS ILE ASP GLU ALA VAL ARG TRP ALA SEQRES 11 A 365 ASN ASP LEU GLY ILE TYR LEU ILE LEU ASP TRP HIS SER SEQRES 12 A 365 ILE GLY TYR LEU PRO THR GLU GLN TYR GLN HIS PRO MET SEQRES 13 A 365 TYR ASP THR THR ILE LYS GLU THR ARG ASP PHE TRP ARG SEQRES 14 A 365 ARG ILE THR PHE ARG TYR GLN ASN VAL PRO THR VAL ALA SEQRES 15 A 365 VAL TYR GLU LEU PHE ASN GLU PRO THR THR MET GLY ASN SEQRES 16 A 365 THR LEU GLY GLU ARG ASN TRP ALA GLU TRP LYS THR LEU SEQRES 17 A 365 ASN GLU SER LEU ILE ASP MET ILE TYR ALA SER ASP LYS SEQRES 18 A 365 THR VAL ILE PRO LEU VAL ALA GLY PHE ASN TRP ALA TYR SEQRES 19 A 365 ASP LEU SER PRO ILE LYS LYS ALA PRO ILE GLU ARG GLU SEQRES 20 A 365 GLY ILE ALA TYR ALA ALA HIS PRO TYR PRO GLN LYS ALA SEQRES 21 A 365 LYS PRO GLU VAL LYS ASN ASP LYS ASN PHE PHE LYS LEU SEQRES 22 A 365 TRP ASP GLU LYS TRP GLY PHE ALA ALA ASP THR TYR PRO SEQRES 23 A 365 VAL ILE ALA THR GLN LEU GLY TRP VAL GLN PRO ASP GLY SEQRES 24 A 365 TYR GLY ALA HIS ILE PRO VAL LYS ASP ASP GLY SER TYR SEQRES 25 A 365 GLY PRO ARG ILE VAL LYS TYR MET GLN LYS LYS GLY VAL SEQRES 26 A 365 SER TYR THR VAL TRP VAL PHE ASP PRO ASP TRP SER PRO SEQRES 27 A 365 THR MET ILE ASN ASP TRP ASP PHE THR PRO SER GLU GLN SEQRES 28 A 365 GLY ALA PHE PHE LYS GLN VAL MET LEU GLU ALA LYS LYS SEQRES 29 A 365 ARG HET BGC B 1 12 HET BGC B 2 11 HET BGC B 3 11 HET BGC B 4 11 HET CL A1366 1 HET MG A1367 1 HET SO4 A1368 5 HET SO4 A1369 5 HET GOL A1370 6 HET GOL A1371 6 HET GOL A1372 6 HET PGE A1373 4 HET PGE A1374 4 HET PGE A1375 4 HET PGE A1376 4 HET PGE A1377 4 HET PGE A1378 4 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM PGE TRIETHYLENE GLYCOL HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 BGC 4(C6 H12 O6) FORMUL 3 CL CL 1- FORMUL 4 MG MG 2+ FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 GOL 3(C3 H8 O3) FORMUL 10 PGE 6(C6 H14 O4) FORMUL 16 HOH *291(H2 O) HELIX 1 1 ASP A 30 ILE A 34 5 5 HELIX 2 2 ASP A 41 LEU A 45 5 5 HELIX 3 3 ASP A 75 ARG A 82 1 8 HELIX 4 4 GLN A 86 TRP A 97 1 12 HELIX 5 5 HIS A 107 GLY A 115 1 9 HELIX 6 6 GLY A 115 LEU A 133 1 19 HELIX 7 7 HIS A 154 ASP A 158 5 5 HELIX 8 8 THR A 160 TYR A 175 1 16 HELIX 9 9 ASN A 201 ALA A 218 1 18 HELIX 10 10 GLY A 229 TYR A 234 1 6 HELIX 11 11 LEU A 236 LYS A 241 5 6 HELIX 12 12 ASN A 266 TRP A 278 1 13 HELIX 13 13 GLY A 279 THR A 284 5 6 HELIX 14 14 SER A 311 GLY A 324 1 14 HELIX 15 15 SER A 349 LYS A 364 1 16 SHEET 1 AA 3 ILE A 51 LYS A 54 0 SHEET 2 AA 3 LYS A 57 ASP A 60 -1 O LYS A 57 N LYS A 54 SHEET 3 AA 3 THR A 65 PHE A 66 -1 O PHE A 66 N PHE A 58 SHEET 1 AB 9 ARG A 69 ASN A 72 0 SHEET 2 AB 9 SER A 326 VAL A 329 1 O TYR A 327 N GLY A 70 SHEET 3 AB 9 VAL A 287 ALA A 289 1 O VAL A 287 N SER A 326 SHEET 4 AB 9 ALA A 250 ALA A 252 1 O TYR A 251 N ILE A 288 SHEET 5 AB 9 ILE A 224 VAL A 227 1 O PRO A 225 N ALA A 250 SHEET 6 AB 9 VAL A 181 GLU A 185 1 O ALA A 182 N ILE A 224 SHEET 7 AB 9 TYR A 136 TRP A 141 1 O LEU A 137 N ALA A 182 SHEET 8 AB 9 THR A 101 ILE A 106 1 O ILE A 102 N ILE A 138 SHEET 9 AB 9 ARG A 69 ASN A 72 1 O VAL A 71 N ARG A 103 SHEET 1 AC 3 GLN A 151 TYR A 152 0 SHEET 2 AC 3 ILE A 144 TYR A 146 -1 O TYR A 146 N GLN A 151 SHEET 3 AC 3 GLU A 189 PRO A 190 1 O GLU A 189 N GLY A 145 LINK O4 BGC B 1 C1 BGC B 2 1555 1555 1.42 LINK O4 BGC B 2 C1 BGC B 3 1555 1555 1.42 LINK O4 BGC B 3 C1 BGC B 4 1555 1555 1.42 LINK O VAL A 178 MG MG A1367 1555 1555 2.25 LINK O VAL A 181 MG MG A1367 1555 1555 2.28 LINK MG MG A1367 O HOH A2159 1555 1555 2.34 LINK MG MG A1367 O HOH A2163 1555 1555 2.33 LINK MG MG A1367 O HOH A2166 1555 1555 2.45 CISPEP 1 ILE A 304 PRO A 305 0 2.56 CISPEP 2 TRP A 330 VAL A 331 0 0.93 CISPEP 3 SER A 337 PRO A 338 0 -7.09 CRYST1 143.773 143.773 143.773 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006955 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006955 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006955 0.00000