data_5AAQ # _entry.id 5AAQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5AAQ PDBE EBI-64530 WWPDB D_1290064530 BMRB 25734 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 5AAS unspecified 'THE SELECTIVE AUTOPHAGY RECEPTOR TAX1BP1 IS REQUIRED FOR AUTOPHAGY-DEPENDENT CAPTURE OF CYTOSOLIC SALMONELLA TYPHIMURIUM' PDB 5AAY unspecified 'TBK1 RECRUITMENT TO CYTOSOL-INVADING SALMONELLA INDUCES ANTI-BACTERIAL AUTOPHAGY' PDB 5AAZ unspecified 'TBK1 RECRUITMENT TO CYTOSOL-INVADING SALMONELLA INDUCES ANTI-BACTERIAL AUTOPHAGY' BMRB 25734 unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5AAQ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-07-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thurston, T.L.' 1 'Allen, M.D.' 2 'Ravenhill, B.' 3 'Karpiyevitch, M.' 4 'Bloor, S.' 5 'Kaul, A.' 6 'Matthews, S.' 7 'Komander, D.' 8 'Holden, D.' 9 'Bycroft, M.' 10 'Randow, F.' 11 # _citation.id primary _citation.title 'Recruitment of Tbk1 to Cytosol-Invading Salmonella Induces Wipi2-Dependent Antibacterial Autophagy.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 35 _citation.page_first 1779 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27370208 _citation.pdbx_database_id_DOI 10.15252/EMBJ.201694491 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thurston, T.L.' 1 ? primary 'Boyle, K.B.' 2 ? primary 'Allen, M.' 3 ? primary 'Ravenhill, B.J.' 4 ? primary 'Karpiyevich, M.' 5 ? primary 'Bloor, S.' 6 ? primary 'Kaul, A.' 7 ? primary 'Noad, J.' 8 ? primary 'Foeglein, A.' 9 ? primary 'Matthews, S.A.' 10 ? primary 'Komander, D.' 11 ? primary 'Bycroft, M.' 12 ? primary 'Randow, F.' 13 ? # _cell.entry_id 5AAQ _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AAQ _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CALCIUM-BINDING AND COILED-COIL DOMAIN-CONTAINING PROTEIN 2' 6800.896 1 ? ? 'UNP RESIDUES 388-446' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ANTIGEN NUCLEAR DOT 52 KDA PROTEIN, NUCLEAR DOMAIN 10 PROTEIN NDP52, NUCLEAR DOMAIN 10 PROTEIN 52, NDP52 ZINC FINGER' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSPSPLSIKKCPICKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL _entity_poly.pdbx_seq_one_letter_code_can GSPSPLSIKKCPICKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PRO n 1 4 SER n 1 5 PRO n 1 6 LEU n 1 7 SER n 1 8 ILE n 1 9 LYS n 1 10 LYS n 1 11 CYS n 1 12 PRO n 1 13 ILE n 1 14 CYS n 1 15 LYS n 1 16 ALA n 1 17 ASP n 1 18 ASP n 1 19 ILE n 1 20 CYS n 1 21 ASP n 1 22 HIS n 1 23 THR n 1 24 LEU n 1 25 GLU n 1 26 GLN n 1 27 GLN n 1 28 GLN n 1 29 MET n 1 30 GLN n 1 31 PRO n 1 32 LEU n 1 33 CYS n 1 34 PHE n 1 35 ASN n 1 36 CYS n 1 37 PRO n 1 38 ILE n 1 39 CYS n 1 40 ASP n 1 41 LYS n 1 42 ILE n 1 43 PHE n 1 44 PRO n 1 45 ALA n 1 46 THR n 1 47 GLU n 1 48 LYS n 1 49 GLN n 1 50 ILE n 1 51 PHE n 1 52 GLU n 1 53 ASP n 1 54 HIS n 1 55 VAL n 1 56 PHE n 1 57 CYS n 1 58 HIS n 1 59 SER n 1 60 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant C41 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name HLTV _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CACO2_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q13137 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5AAQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 60 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13137 _struct_ref_seq.db_align_beg 388 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 446 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 388 _struct_ref_seq.pdbx_auth_seq_align_end 446 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5AAQ _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q13137 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 387 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 TOCSY 1 3 1 DQF-COSY 1 4 1 HSQC 1 5 1 HNCACB 1 6 1 CBCACONH 1 7 1 HNCO 1 8 1 HNCACO 1 9 1 HNHB 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298.0 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1.0 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '95% WATER/5% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 5AAQ _pdbx_nmr_refine.method CNS _pdbx_nmr_refine.details 'REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 5AAQ _pdbx_nmr_details.text NONE # _pdbx_nmr_ensemble.entry_id 5AAQ _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'NO VIOLATIONS' # _pdbx_nmr_representative.entry_id 5AAQ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement CNS ? 'BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ, RICE,SIMONSON,WARREN' 1 'structure solution' ANSIG ? ? 2 'structure solution' CNS ? ? 3 # _exptl.entry_id 5AAQ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 5AAQ _struct.title 'TBK1 recruitment to cytosol-invading Salmonella induces anti- bacterial autophagy' _struct.pdbx_descriptor 'CALCIUM-BINDING AND COILED-COIL DOMAIN-CONTAINING PROTEIN 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5AAQ _struct_keywords.pdbx_keywords 'CALCIUM-BINDING PROTEIN' _struct_keywords.text 'CALCIUM-BINDING PROTEIN, TBK1, NDP52, ZINC-FINGER' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 23 ? GLN A 28 ? THR A 409 GLN A 414 1 ? 6 HELX_P HELX_P2 2 GLU A 47 ? LEU A 60 ? GLU A 433 LEU A 446 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 58 NE2 ? ? A ZN 447 A HIS 444 1_555 ? ? ? ? ? ? ? 2.045 ? metalc2 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 39 SG ? ? A ZN 447 A CYS 425 1_555 ? ? ? ? ? ? ? 2.242 ? metalc3 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 54 NE2 ? ? A ZN 447 A HIS 440 1_555 ? ? ? ? ? ? ? 2.004 ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 36 SG ? ? A ZN 447 A CYS 422 1_555 ? ? ? ? ? ? ? 2.346 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 CYS A 33 ? CYS A 36 ? CYS A 419 CYS A 422 AA 2 LYS A 41 ? PRO A 44 ? LYS A 427 PRO A 430 # _pdbx_struct_sheet_hbond.sheet_id AA _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id CYS _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 36 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id CYS _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 422 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id LYS _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 41 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id LYS _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 427 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE ZN A 447' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 36 ? CYS A 422 . ? 1_555 ? 2 AC1 4 CYS A 39 ? CYS A 425 . ? 1_555 ? 3 AC1 4 HIS A 54 ? HIS A 440 . ? 1_555 ? 4 AC1 4 HIS A 58 ? HIS A 444 . ? 1_555 ? # _database_PDB_matrix.entry_id 5AAQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5AAQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 387 ? ? ? A . n A 1 2 SER 2 388 ? ? ? A . n A 1 3 PRO 3 389 ? ? ? A . n A 1 4 SER 4 390 390 SER SER A . n A 1 5 PRO 5 391 391 PRO PRO A . n A 1 6 LEU 6 392 392 LEU LEU A . n A 1 7 SER 7 393 393 SER SER A . n A 1 8 ILE 8 394 394 ILE ILE A . n A 1 9 LYS 9 395 395 LYS LYS A . n A 1 10 LYS 10 396 396 LYS LYS A . n A 1 11 CYS 11 397 397 CYS CYS A . n A 1 12 PRO 12 398 398 PRO PRO A . n A 1 13 ILE 13 399 399 ILE ILE A . n A 1 14 CYS 14 400 400 CYS CYS A . n A 1 15 LYS 15 401 401 LYS LYS A . n A 1 16 ALA 16 402 402 ALA ALA A . n A 1 17 ASP 17 403 403 ASP ASP A . n A 1 18 ASP 18 404 404 ASP ASP A . n A 1 19 ILE 19 405 405 ILE ILE A . n A 1 20 CYS 20 406 406 CYS CYS A . n A 1 21 ASP 21 407 407 ASP ASP A . n A 1 22 HIS 22 408 408 HIS HIS A . n A 1 23 THR 23 409 409 THR THR A . n A 1 24 LEU 24 410 410 LEU LEU A . n A 1 25 GLU 25 411 411 GLU GLU A . n A 1 26 GLN 26 412 412 GLN GLN A . n A 1 27 GLN 27 413 413 GLN GLN A . n A 1 28 GLN 28 414 414 GLN GLN A . n A 1 29 MET 29 415 415 MET MET A . n A 1 30 GLN 30 416 416 GLN GLN A . n A 1 31 PRO 31 417 417 PRO PRO A . n A 1 32 LEU 32 418 418 LEU LEU A . n A 1 33 CYS 33 419 419 CYS CYS A . n A 1 34 PHE 34 420 420 PHE PHE A . n A 1 35 ASN 35 421 421 ASN ASN A . n A 1 36 CYS 36 422 422 CYS CYS A . n A 1 37 PRO 37 423 423 PRO PRO A . n A 1 38 ILE 38 424 424 ILE ILE A . n A 1 39 CYS 39 425 425 CYS CYS A . n A 1 40 ASP 40 426 426 ASP ASP A . n A 1 41 LYS 41 427 427 LYS LYS A . n A 1 42 ILE 42 428 428 ILE ILE A . n A 1 43 PHE 43 429 429 PHE PHE A . n A 1 44 PRO 44 430 430 PRO PRO A . n A 1 45 ALA 45 431 431 ALA ALA A . n A 1 46 THR 46 432 432 THR THR A . n A 1 47 GLU 47 433 433 GLU GLU A . n A 1 48 LYS 48 434 434 LYS LYS A . n A 1 49 GLN 49 435 435 GLN GLN A . n A 1 50 ILE 50 436 436 ILE ILE A . n A 1 51 PHE 51 437 437 PHE PHE A . n A 1 52 GLU 52 438 438 GLU GLU A . n A 1 53 ASP 53 439 439 ASP ASP A . n A 1 54 HIS 54 440 440 HIS HIS A . n A 1 55 VAL 55 441 441 VAL VAL A . n A 1 56 PHE 56 442 442 PHE PHE A . n A 1 57 CYS 57 443 443 CYS CYS A . n A 1 58 HIS 58 444 444 HIS HIS A . n A 1 59 SER 59 445 445 SER SER A . n A 1 60 LEU 60 446 446 LEU LEU A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 447 _pdbx_nonpoly_scheme.auth_seq_num 447 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 58 ? A HIS 444 ? 1_555 ZN ? B ZN . ? A ZN 447 ? 1_555 SG ? A CYS 39 ? A CYS 425 ? 1_555 98.0 ? 2 NE2 ? A HIS 58 ? A HIS 444 ? 1_555 ZN ? B ZN . ? A ZN 447 ? 1_555 NE2 ? A HIS 54 ? A HIS 440 ? 1_555 93.1 ? 3 SG ? A CYS 39 ? A CYS 425 ? 1_555 ZN ? B ZN . ? A ZN 447 ? 1_555 NE2 ? A HIS 54 ? A HIS 440 ? 1_555 118.6 ? 4 NE2 ? A HIS 58 ? A HIS 444 ? 1_555 ZN ? B ZN . ? A ZN 447 ? 1_555 SG ? A CYS 36 ? A CYS 422 ? 1_555 100.4 ? 5 SG ? A CYS 39 ? A CYS 425 ? 1_555 ZN ? B ZN . ? A ZN 447 ? 1_555 SG ? A CYS 36 ? A CYS 422 ? 1_555 121.9 ? 6 NE2 ? A HIS 54 ? A HIS 440 ? 1_555 ZN ? B ZN . ? A ZN 447 ? 1_555 SG ? A CYS 36 ? A CYS 422 ? 1_555 114.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-07-13 2 'Structure model' 1 1 2016-08-31 3 'Structure model' 2 0 2019-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.Cartn_x' 2 3 'Structure model' '_atom_site.Cartn_y' 3 3 'Structure model' '_atom_site.Cartn_z' 4 3 'Structure model' '_pdbx_database_status.status_code_cs' 5 3 'Structure model' '_pdbx_database_status.status_code_mr' 6 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 392 ? ? 61.51 151.75 2 1 SER A 393 ? ? 60.80 160.40 3 1 CYS A 406 ? ? 179.95 -179.63 4 1 THR A 409 ? ? 64.21 114.01 5 1 GLN A 414 ? ? -94.12 46.35 6 2 SER A 393 ? ? 57.93 105.86 7 2 LYS A 395 ? ? -150.95 -78.07 8 2 CYS A 400 ? ? -165.74 -47.42 9 2 ASP A 404 ? ? -78.41 -78.10 10 2 ILE A 405 ? ? -166.88 -43.60 11 2 THR A 409 ? ? 63.01 123.48 12 3 SER A 393 ? ? -153.55 -46.04 13 3 ILE A 399 ? ? 64.48 97.16 14 3 ASP A 404 ? ? 62.40 119.49 15 3 ILE A 405 ? ? -98.31 31.41 16 3 THR A 409 ? ? 61.82 105.52 17 3 MET A 415 ? ? -159.35 -44.94 18 3 GLN A 416 ? ? -170.97 73.82 19 4 LEU A 392 ? ? -155.16 -46.55 20 4 SER A 393 ? ? -178.00 121.77 21 4 ILE A 394 ? ? -90.33 54.47 22 4 ILE A 399 ? ? -175.97 -40.58 23 4 CYS A 400 ? ? -158.06 -45.25 24 4 ASP A 404 ? ? 62.73 -176.61 25 4 THR A 409 ? ? 57.65 170.15 26 4 MET A 415 ? ? -175.41 146.40 27 5 THR A 409 ? ? 61.81 115.06 28 6 ILE A 399 ? ? -115.14 69.80 29 6 ILE A 405 ? ? -140.90 29.90 30 6 THR A 409 ? ? 62.91 140.42 31 6 GLN A 416 ? ? 59.94 88.81 32 7 SER A 393 ? ? -172.73 129.56 33 7 CYS A 400 ? ? -162.98 96.81 34 7 ASP A 404 ? ? 57.53 -179.96 35 7 CYS A 406 ? ? -171.89 -67.90 36 7 THR A 409 ? ? 62.24 142.78 37 7 MET A 415 ? ? -164.22 56.41 38 8 PRO A 391 ? ? -52.77 90.64 39 8 SER A 393 ? ? -60.20 -174.43 40 8 ILE A 394 ? ? -99.23 32.26 41 8 CYS A 406 ? ? -175.53 -40.81 42 8 THR A 409 ? ? 63.07 121.83 43 9 PRO A 391 ? ? -52.91 97.32 44 9 ILE A 399 ? ? -124.13 -52.16 45 9 THR A 409 ? ? 63.65 128.15 46 10 LYS A 395 ? ? -96.06 40.59 47 10 CYS A 400 ? ? -164.55 39.81 48 10 ILE A 405 ? ? -174.52 -40.94 49 10 THR A 409 ? ? 61.28 96.06 50 10 GLN A 414 ? ? -59.83 170.05 51 11 PRO A 391 ? ? -51.64 109.63 52 11 LEU A 392 ? ? -118.53 -72.43 53 11 SER A 393 ? ? 63.60 88.90 54 11 ILE A 394 ? ? -166.06 51.41 55 11 CYS A 400 ? ? 63.02 113.66 56 11 ILE A 405 ? ? -171.69 145.29 57 11 THR A 409 ? ? 63.20 143.69 58 11 GLN A 414 ? ? 63.00 -81.26 59 11 MET A 415 ? ? 178.21 81.16 60 12 CYS A 400 ? ? -164.87 107.13 61 12 ASP A 404 ? ? -71.98 -168.11 62 12 ILE A 405 ? ? 69.40 -67.20 63 12 CYS A 406 ? ? -61.85 -176.38 64 12 THR A 409 ? ? 50.48 96.40 65 13 CYS A 400 ? ? -98.36 -65.48 66 13 ASP A 404 ? ? 56.30 -173.37 67 13 CYS A 406 ? ? -144.67 -70.55 68 13 THR A 409 ? ? 62.66 106.42 69 13 GLN A 416 ? ? -59.20 109.24 70 14 ILE A 399 ? ? -150.29 82.36 71 14 CYS A 400 ? ? -153.99 -62.90 72 14 ASP A 404 ? ? 55.33 -168.31 73 14 ILE A 405 ? ? -61.64 87.33 74 14 THR A 409 ? ? 60.07 93.82 75 15 ILE A 399 ? ? -100.90 -64.39 76 15 CYS A 400 ? ? 70.95 -61.24 77 15 THR A 409 ? ? 61.93 111.96 78 15 GLN A 414 ? ? -84.74 -74.60 79 16 SER A 393 ? ? 60.31 177.95 80 16 ILE A 399 ? ? -87.13 -70.29 81 16 CYS A 406 ? ? -78.82 -73.74 82 16 THR A 409 ? ? 43.32 87.48 83 17 SER A 393 ? ? -148.45 23.19 84 17 ILE A 394 ? ? 53.61 97.95 85 17 LYS A 395 ? ? -172.43 50.50 86 17 ILE A 399 ? ? 62.71 93.77 87 17 THR A 409 ? ? 64.80 140.10 88 18 LEU A 392 ? ? 60.86 155.98 89 18 LYS A 395 ? ? -157.83 -73.96 90 18 ASP A 404 ? ? -174.09 135.88 91 18 CYS A 406 ? ? 56.60 171.60 92 18 THR A 409 ? ? 62.94 146.60 93 18 GLN A 416 ? ? 58.93 93.21 94 19 LEU A 392 ? ? -162.94 -45.12 95 19 SER A 393 ? ? -179.72 -38.70 96 19 LYS A 395 ? ? -169.44 110.89 97 19 CYS A 400 ? ? -161.76 -45.72 98 19 ASP A 404 ? ? 84.88 -21.43 99 19 ILE A 405 ? ? -178.82 109.95 100 19 THR A 409 ? ? 59.91 97.85 101 20 ASP A 404 ? ? 64.75 -171.16 102 20 THR A 409 ? ? 64.18 131.72 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 387 ? A GLY 1 2 1 Y 1 A SER 388 ? A SER 2 3 1 Y 1 A PRO 389 ? A PRO 3 4 2 Y 1 A GLY 387 ? A GLY 1 5 2 Y 1 A SER 388 ? A SER 2 6 2 Y 1 A PRO 389 ? A PRO 3 7 3 Y 1 A GLY 387 ? A GLY 1 8 3 Y 1 A SER 388 ? A SER 2 9 3 Y 1 A PRO 389 ? A PRO 3 10 4 Y 1 A GLY 387 ? A GLY 1 11 4 Y 1 A SER 388 ? A SER 2 12 4 Y 1 A PRO 389 ? A PRO 3 13 5 Y 1 A GLY 387 ? A GLY 1 14 5 Y 1 A SER 388 ? A SER 2 15 5 Y 1 A PRO 389 ? A PRO 3 16 6 Y 1 A GLY 387 ? A GLY 1 17 6 Y 1 A SER 388 ? A SER 2 18 6 Y 1 A PRO 389 ? A PRO 3 19 7 Y 1 A GLY 387 ? A GLY 1 20 7 Y 1 A SER 388 ? A SER 2 21 7 Y 1 A PRO 389 ? A PRO 3 22 8 Y 1 A GLY 387 ? A GLY 1 23 8 Y 1 A SER 388 ? A SER 2 24 8 Y 1 A PRO 389 ? A PRO 3 25 9 Y 1 A GLY 387 ? A GLY 1 26 9 Y 1 A SER 388 ? A SER 2 27 9 Y 1 A PRO 389 ? A PRO 3 28 10 Y 1 A GLY 387 ? A GLY 1 29 10 Y 1 A SER 388 ? A SER 2 30 10 Y 1 A PRO 389 ? A PRO 3 31 11 Y 1 A GLY 387 ? A GLY 1 32 11 Y 1 A SER 388 ? A SER 2 33 11 Y 1 A PRO 389 ? A PRO 3 34 12 Y 1 A GLY 387 ? A GLY 1 35 12 Y 1 A SER 388 ? A SER 2 36 12 Y 1 A PRO 389 ? A PRO 3 37 13 Y 1 A GLY 387 ? A GLY 1 38 13 Y 1 A SER 388 ? A SER 2 39 13 Y 1 A PRO 389 ? A PRO 3 40 14 Y 1 A GLY 387 ? A GLY 1 41 14 Y 1 A SER 388 ? A SER 2 42 14 Y 1 A PRO 389 ? A PRO 3 43 15 Y 1 A GLY 387 ? A GLY 1 44 15 Y 1 A SER 388 ? A SER 2 45 15 Y 1 A PRO 389 ? A PRO 3 46 16 Y 1 A GLY 387 ? A GLY 1 47 16 Y 1 A SER 388 ? A SER 2 48 16 Y 1 A PRO 389 ? A PRO 3 49 17 Y 1 A GLY 387 ? A GLY 1 50 17 Y 1 A SER 388 ? A SER 2 51 17 Y 1 A PRO 389 ? A PRO 3 52 18 Y 1 A GLY 387 ? A GLY 1 53 18 Y 1 A SER 388 ? A SER 2 54 18 Y 1 A PRO 389 ? A PRO 3 55 19 Y 1 A GLY 387 ? A GLY 1 56 19 Y 1 A SER 388 ? A SER 2 57 19 Y 1 A PRO 389 ? A PRO 3 58 20 Y 1 A GLY 387 ? A GLY 1 59 20 Y 1 A SER 388 ? A SER 2 60 20 Y 1 A PRO 389 ? A PRO 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #