HEADER TRANSPORT PROTEIN 01-AUG-15 5AB5 TITLE CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI SCP2-THIOLASE LIKE PROTEIN TITLE 2 (TBSLP) FORM-II. COMPND MOL_ID: 1; COMPND 2 MOLECULE: SCP2-THIOLASE LIKE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI; SOURCE 3 ORGANISM_TAXID: 5702; SOURCE 4 STRAIN: EATRO1125; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TRANSPORT PROTEIN, COENZYME A, SCP2-THIOLASE, SCP2-THIOLASE-LIKE KEYWDS 2 PROTEIN, MALONYL-COA DECARBOXYLASE, GENE KNOCKOUT, LIPID METABOLISM EXPDTA X-RAY DIFFRACTION AUTHOR R.K.HARIJAN,T.R.KIEMA,R.K.WIERENGA REVDAT 3 08-MAY-24 5AB5 1 REMARK REVDAT 2 27-JUL-16 5AB5 1 JRNL REVDAT 1 04-MAY-16 5AB5 0 JRNL AUTH R.K.HARIJAN,M.MAZET,T.R.KIEMA,G.BOUYSSOU,S.E.H.ALEXSON, JRNL AUTH 2 U.BERGMANN,P.MOREAU,P.A.M.MICHELS,F.BRINGAUD,R.K.WIERENGA JRNL TITL THE SCP2-THIOLASE-LIKE PROTEIN (SLP) OF TRYPANOSOMA BRUCEI JRNL TITL 2 IS AN ENZYME INVOLVED IN LIPID METABOLISM. JRNL REF PROTEINS V. 84 1075 2016 JRNL REFN ISSN 0887-3585 JRNL PMID 27093562 JRNL DOI 10.1002/PROT.25054 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 52602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.8304 - 5.2198 0.94 2773 155 0.1548 0.1557 REMARK 3 2 5.2198 - 4.1525 0.95 2778 127 0.1335 0.1711 REMARK 3 3 4.1525 - 3.6303 0.94 2783 139 0.1437 0.1477 REMARK 3 4 3.6303 - 3.2996 0.95 2793 131 0.1727 0.2287 REMARK 3 5 3.2996 - 3.0638 0.96 2814 124 0.2003 0.2223 REMARK 3 6 3.0638 - 2.8836 0.96 2780 120 0.2263 0.2482 REMARK 3 7 2.8836 - 2.7395 0.95 2838 144 0.2297 0.2836 REMARK 3 8 2.7395 - 2.6204 0.96 2784 124 0.2414 0.3318 REMARK 3 9 2.6204 - 2.5197 0.94 2775 164 0.2577 0.2469 REMARK 3 10 2.5197 - 2.4329 0.94 2749 166 0.2730 0.2233 REMARK 3 11 2.4329 - 2.3569 0.94 2746 157 0.2648 0.2566 REMARK 3 12 2.3569 - 2.2896 0.95 2775 129 0.2698 0.2527 REMARK 3 13 2.2896 - 2.2294 0.95 2775 138 0.2695 0.3740 REMARK 3 14 2.2294 - 2.1750 0.94 2785 152 0.2896 0.2973 REMARK 3 15 2.1750 - 2.1256 0.94 2794 152 0.3054 0.2838 REMARK 3 16 2.1256 - 2.0804 0.94 2706 133 0.3049 0.3508 REMARK 3 17 2.0804 - 2.0388 0.94 2796 139 0.3286 0.3246 REMARK 3 18 2.0388 - 2.0004 0.94 2767 157 0.3519 0.3999 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5000 REMARK 3 OPERATOR: H,-H-K,-L L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6244 REMARK 3 ANGLE : 0.892 8480 REMARK 3 CHIRALITY : 0.057 948 REMARK 3 PLANARITY : 0.004 1108 REMARK 3 DIHEDRAL : 12.822 2248 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5AB5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1290064573. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976250 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52628 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 28.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 1.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE (PH 4.6), 2.0 M REMARK 280 AMMONIUM SULPHATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.97333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.48667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -193.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 3 OG REMARK 470 SER B 3 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR B 297 O1 SO4 B 1411 2.15 REMARK 500 O VAL A 193 OG SER A 196 2.16 REMARK 500 OD1 ASN A 393 O HOH A 2066 2.18 REMARK 500 O3 SO4 B 1410 O HOH B 2042 2.18 REMARK 500 O1 SO4 B 1411 O HOH B 2042 2.18 REMARK 500 OH TYR B 327 O HOH B 2030 2.18 REMARK 500 OE1 GLN B 306 O HOH B 2044 2.19 REMARK 500 OG SER B 122 O HOH B 2023 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 231 70.74 -66.41 REMARK 500 LYS A 234 52.41 -106.94 REMARK 500 ASP A 298 53.87 -142.59 REMARK 500 ASN A 332 38.17 -80.30 REMARK 500 ASN A 333 32.76 -160.43 REMARK 500 TRP A 357 -100.41 61.45 REMARK 500 ALA B 231 74.00 -65.36 REMARK 500 LYS B 234 54.79 -104.61 REMARK 500 SER B 243 -35.22 70.20 REMARK 500 PRO B 260 -177.65 -60.77 REMARK 500 SER B 262 -129.20 -107.22 REMARK 500 SER B 263 -33.48 -166.72 REMARK 500 ASP B 298 54.11 -142.54 REMARK 500 ASN B 332 38.37 -79.71 REMARK 500 ASN B 333 33.54 -160.94 REMARK 500 ALA B 355 88.96 -150.78 REMARK 500 TRP B 357 -100.39 61.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1416 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B2052 DISTANCE = 6.85 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1413 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1415 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1414 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1415 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1416 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AB4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI SCP2-THIOLASE LIKE PROTEIN REMARK 900 (TBSLP) FORM-I. REMARK 900 RELATED ID: 5AB6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI SCP2-THIOLASE LIKE PROTEIN REMARK 900 (TBSLP) IN COMPLEX WITH ACETOACETYL-COA. REMARK 900 RELATED ID: 5AB7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI SCP2-THIOLASE LIKE PROTEIN REMARK 900 (TBSLP) IN COMPLEX WITH MALONYL-COA. DBREF 5AB5 A 1 409 UNP C9ZUV7 C9ZUV7_TRYB9 1 409 DBREF 5AB5 B 1 409 UNP C9ZUV7 C9ZUV7_TRYB9 1 409 SEQADV 5AB5 HIS A -15 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS A -14 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS A -13 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS A -12 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS A -11 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS A -10 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 SER A -9 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 SER A -8 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 GLY A -7 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 LEU A -6 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 VAL A -5 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 PRO A -4 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 ARG A -3 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 GLY A -2 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 SER A -1 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS A 0 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS B -15 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS B -14 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS B -13 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS B -12 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS B -11 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS B -10 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 SER B -9 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 SER B -8 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 GLY B -7 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 LEU B -6 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 VAL B -5 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 PRO B -4 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 ARG B -3 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 GLY B -2 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 SER B -1 UNP C9ZUV7 EXPRESSION TAG SEQADV 5AB5 HIS B 0 UNP C9ZUV7 EXPRESSION TAG SEQRES 1 A 425 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 425 GLY SER HIS MET ALA SER GLN VAL VAL ARG ILE VAL GLY SEQRES 3 A 425 VAL GLY ARG THR GLY ILE GLY LYS LEU HIS LYS SER VAL SEQRES 4 A 425 ASP GLU LEU ALA ALA SER ALA LEU LYS CYS ALA LEU VAL SEQRES 5 A 425 ASP ALA ASN MET LYS GLN CYS ASP LEU GLN ALA LEU ILE SEQRES 6 A 425 ALA VAL PRO SER LEU ALA SER PRO GLN PHE MET GLN ALA SEQRES 7 A 425 HIS HIS ILE ALA THR VAL ALA GLY LEU PHE PRO THR LYS SEQRES 8 A 425 GLY LYS PHE ILE VAL ARG THR VAL ASP THR GLY GLY ALA SEQRES 9 A 425 GLY PRO ILE THR ALA LEU GLY MET ALA VAL ASP LEU VAL SEQRES 10 A 425 ARG THR ARG CYS ALA GLU THR VAL ALA VAL ILE ALA ALA SEQRES 11 A 425 ASP ALA VAL LEU SER MET GLY SER GLY ALA PHE ALA GLU SEQRES 12 A 425 ARG SER ASN ALA SER LEU ARG ARG SER GLY LEU PRO GLU SEQRES 13 A 425 PRO CYS ILE PRO HIS GLY TYR ASP ARG TYR ALA GLN TRP SEQRES 14 A 425 TYR MET SER ARG TYR GLY LEU LYS ARG GLU GLN LEU ALA SEQRES 15 A 425 MET VAL PRO VAL LEU MET SER LYS MET ALA GLU ARG HIS SEQRES 16 A 425 PRO GLU ALA MET CYS GLN LYS ALA TYR THR LEU ASP GLU SEQRES 17 A 425 VAL LEU HIS SER ARG CYS VAL ALA PRO VAL THR ASN LEU SEQRES 18 A 425 LEU GLU CYS ALA ARG ARG ALA ASP GLY ALA VAL ALA LEU SEQRES 19 A 425 ILE VAL SER GLY GLU ALA HIS TYR ALA GLU HIS PHE ALA SEQRES 20 A 425 GLN GLY LYS GLN GLU GLN ARG HIS LEU GLY GLY SER LYS SEQRES 21 A 425 PRO ILE ILE ALA SER VAL ALA GLU ALA SER GLY PRO LEU SEQRES 22 A 425 PHE PRO PRO GLY SER SER ASP ASP ILE VAL PRO ASP ILE SEQRES 23 A 425 PHE SER CYS ARG HIS ALA ALA ARG ASP ALA PHE LEU SER SEQRES 24 A 425 ALA ASN LEU ASN VAL GLY ASP ILE HIS PHE PHE GLY LEU SEQRES 25 A 425 TYR ASP CYS PHE PRO ILE CYS LEU ILE GLN ALA VAL GLU SEQRES 26 A 425 ALA VAL GLY LEU CYS PRO GLU GLY LYS GLY GLY GLU PHE SEQRES 27 A 425 MET GLU THR ALA TYR ASN GLU MET LEU ASN ASN GLY GLY SEQRES 28 A 425 VAL LEU ASP PRO SER LYS PHE PRO ILE ASN THR HIS GLY SEQRES 29 A 425 GLY LEU GLN CYS PHE GLY ALA PRO TRP GLU VAL PRO ALA SEQRES 30 A 425 MET TYR ASN ILE THR GLU ALA ILE ALA GLN LEU SER GLU SEQRES 31 A 425 GLU ALA GLY ASP ARG GLN LEU THR PRO VAL PRO LYS ARG SEQRES 32 A 425 ALA LEU VAL TYR GLY ASN GLY GLY ILE PHE SER ALA SER SEQRES 33 A 425 SER VAL ALA ILE LEU ILE SER ASP LEU SEQRES 1 B 425 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 B 425 GLY SER HIS MET ALA SER GLN VAL VAL ARG ILE VAL GLY SEQRES 3 B 425 VAL GLY ARG THR GLY ILE GLY LYS LEU HIS LYS SER VAL SEQRES 4 B 425 ASP GLU LEU ALA ALA SER ALA LEU LYS CYS ALA LEU VAL SEQRES 5 B 425 ASP ALA ASN MET LYS GLN CYS ASP LEU GLN ALA LEU ILE SEQRES 6 B 425 ALA VAL PRO SER LEU ALA SER PRO GLN PHE MET GLN ALA SEQRES 7 B 425 HIS HIS ILE ALA THR VAL ALA GLY LEU PHE PRO THR LYS SEQRES 8 B 425 GLY LYS PHE ILE VAL ARG THR VAL ASP THR GLY GLY ALA SEQRES 9 B 425 GLY PRO ILE THR ALA LEU GLY MET ALA VAL ASP LEU VAL SEQRES 10 B 425 ARG THR ARG CYS ALA GLU THR VAL ALA VAL ILE ALA ALA SEQRES 11 B 425 ASP ALA VAL LEU SER MET GLY SER GLY ALA PHE ALA GLU SEQRES 12 B 425 ARG SER ASN ALA SER LEU ARG ARG SER GLY LEU PRO GLU SEQRES 13 B 425 PRO CYS ILE PRO HIS GLY TYR ASP ARG TYR ALA GLN TRP SEQRES 14 B 425 TYR MET SER ARG TYR GLY LEU LYS ARG GLU GLN LEU ALA SEQRES 15 B 425 MET VAL PRO VAL LEU MET SER LYS MET ALA GLU ARG HIS SEQRES 16 B 425 PRO GLU ALA MET CYS GLN LYS ALA TYR THR LEU ASP GLU SEQRES 17 B 425 VAL LEU HIS SER ARG CYS VAL ALA PRO VAL THR ASN LEU SEQRES 18 B 425 LEU GLU CYS ALA ARG ARG ALA ASP GLY ALA VAL ALA LEU SEQRES 19 B 425 ILE VAL SER GLY GLU ALA HIS TYR ALA GLU HIS PHE ALA SEQRES 20 B 425 GLN GLY LYS GLN GLU GLN ARG HIS LEU GLY GLY SER LYS SEQRES 21 B 425 PRO ILE ILE ALA SER VAL ALA GLU ALA SER GLY PRO LEU SEQRES 22 B 425 PHE PRO PRO GLY SER SER ASP ASP ILE VAL PRO ASP ILE SEQRES 23 B 425 PHE SER CYS ARG HIS ALA ALA ARG ASP ALA PHE LEU SER SEQRES 24 B 425 ALA ASN LEU ASN VAL GLY ASP ILE HIS PHE PHE GLY LEU SEQRES 25 B 425 TYR ASP CYS PHE PRO ILE CYS LEU ILE GLN ALA VAL GLU SEQRES 26 B 425 ALA VAL GLY LEU CYS PRO GLU GLY LYS GLY GLY GLU PHE SEQRES 27 B 425 MET GLU THR ALA TYR ASN GLU MET LEU ASN ASN GLY GLY SEQRES 28 B 425 VAL LEU ASP PRO SER LYS PHE PRO ILE ASN THR HIS GLY SEQRES 29 B 425 GLY LEU GLN CYS PHE GLY ALA PRO TRP GLU VAL PRO ALA SEQRES 30 B 425 MET TYR ASN ILE THR GLU ALA ILE ALA GLN LEU SER GLU SEQRES 31 B 425 GLU ALA GLY ASP ARG GLN LEU THR PRO VAL PRO LYS ARG SEQRES 32 B 425 ALA LEU VAL TYR GLY ASN GLY GLY ILE PHE SER ALA SER SEQRES 33 B 425 SER VAL ALA ILE LEU ILE SER ASP LEU HET SO4 A1410 5 HET SO4 A1411 5 HET SO4 A1412 5 HET SO4 A1413 5 HET SO4 A1414 5 HET SO4 A1415 5 HET SO4 B1410 5 HET SO4 B1411 5 HET SO4 B1412 5 HET SO4 B1413 5 HET SO4 B1414 5 HET SO4 B1415 5 HET SO4 B1416 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 13(O4 S 2-) FORMUL 16 HOH *119(H2 O) HELIX 1 1 SER A 22 ASN A 39 1 18 HELIX 2 2 LYS A 41 LEU A 45 5 5 HELIX 3 3 MET A 60 GLY A 70 1 11 HELIX 4 4 THR A 85 GLY A 87 5 3 HELIX 5 5 ALA A 88 THR A 103 1 16 HELIX 6 6 GLY A 121 SER A 132 1 12 HELIX 7 7 PRO A 141 TYR A 158 1 18 HELIX 8 8 LYS A 161 GLU A 177 1 17 HELIX 9 9 THR A 189 HIS A 195 1 7 HELIX 10 10 LEU A 206 CYS A 208 5 3 HELIX 11 11 GLU A 223 PHE A 230 1 8 HELIX 12 12 SER A 262 ILE A 266 5 5 HELIX 13 13 VAL A 267 PHE A 271 5 5 HELIX 14 14 SER A 272 ASN A 285 1 14 HELIX 15 15 ASN A 287 ILE A 291 5 5 HELIX 16 16 PHE A 300 VAL A 311 1 12 HELIX 17 17 LYS A 318 ASN A 332 1 15 HELIX 18 18 ASP A 338 PHE A 342 5 5 HELIX 19 19 GLY A 348 PHE A 353 1 6 HELIX 20 20 PRO A 360 SER A 373 1 14 HELIX 21 21 ALA A 376 GLN A 380 5 5 HELIX 22 22 SER B 22 ASN B 39 1 18 HELIX 23 23 LYS B 41 LEU B 45 5 5 HELIX 24 24 MET B 60 GLY B 70 1 11 HELIX 25 25 THR B 85 GLY B 87 5 3 HELIX 26 26 ALA B 88 THR B 103 1 16 HELIX 27 27 GLY B 121 SER B 132 1 12 HELIX 28 28 PRO B 141 TYR B 158 1 18 HELIX 29 29 LYS B 161 GLU B 177 1 17 HELIX 30 30 THR B 189 HIS B 195 1 7 HELIX 31 31 LEU B 206 CYS B 208 5 3 HELIX 32 32 GLU B 223 PHE B 230 1 8 HELIX 33 33 VAL B 267 PHE B 271 5 5 HELIX 34 34 SER B 272 ASN B 285 1 14 HELIX 35 35 ASN B 287 ILE B 291 5 5 HELIX 36 36 PHE B 300 VAL B 311 1 12 HELIX 37 37 LYS B 318 ASN B 332 1 15 HELIX 38 38 ASP B 338 PHE B 342 5 5 HELIX 39 39 GLY B 348 PHE B 353 1 6 HELIX 40 40 PRO B 360 SER B 373 1 14 HELIX 41 41 ALA B 376 GLN B 380 5 5 SHEET 1 A14 PHE A 293 GLY A 295 0 SHEET 2 A14 ARG A 387 GLY A 394 1 O TYR A 391 N GLY A 295 SHEET 3 A14 ALA A 399 ILE A 406 -1 O LEU A 405 N ALA A 388 SHEET 4 A14 ILE A 246 SER A 254 -1 N ALA A 253 O SER A 400 SHEET 5 A14 VAL A 6 ARG A 13 -1 N VAL A 6 O ILE A 247 SHEET 6 A14 ASP A 213 GLY A 222 -1 O ALA A 217 N GLY A 12 SHEET 7 A14 THR A 108 ALA A 116 -1 N VAL A 109 O VAL A 220 SHEET 8 A14 ALA A 47 ALA A 50 1 N ILE A 49 O ILE A 112 SHEET 9 A14 ILE A 79 ASP A 84 1 O VAL A 83 N ALA A 50 SHEET 10 A14 ILE B 79 ASP B 84 -1 O ASP B 84 N THR A 82 SHEET 11 A14 ALA B 47 ALA B 50 1 N LEU B 48 O ILE B 79 SHEET 12 A14 THR B 108 ALA B 116 1 O ALA B 110 N ILE B 49 SHEET 13 A14 ASP B 213 GLY B 222 -1 O VAL B 220 N VAL B 109 SHEET 14 A14 VAL B 6 ARG B 13 -1 N GLY B 12 O ALA B 217 SHEET 1 B 2 CYS A 198 ALA A 200 0 SHEET 2 B 2 THR A 203 ASN A 204 -1 O THR A 203 N ALA A 200 SHEET 1 C 2 CYS B 198 ALA B 200 0 SHEET 2 C 2 THR B 203 ASN B 204 -1 O THR B 203 N ALA B 200 SHEET 1 D 4 ILE B 246 SER B 254 0 SHEET 2 D 4 ALA B 399 ILE B 406 -1 O ILE B 406 N ILE B 246 SHEET 3 D 4 ARG B 387 GLY B 394 -1 N VAL B 390 O ALA B 403 SHEET 4 D 4 PHE B 293 LEU B 296 1 N GLY B 295 O LEU B 389 CISPEP 1 PHE A 72 PRO A 73 0 1.70 CISPEP 2 GLU A 140 PRO A 141 0 -2.26 CISPEP 3 THR A 382 PRO A 383 0 -2.11 CISPEP 4 PHE B 72 PRO B 73 0 2.46 CISPEP 5 GLU B 140 PRO B 141 0 -3.18 CISPEP 6 GLY B 334 GLY B 335 0 8.92 CISPEP 7 THR B 382 PRO B 383 0 -0.25 SITE 1 AC1 4 ARG A 135 SER A 136 GLY A 137 HOH A2031 SITE 1 AC2 6 PHE B 125 ALA B 209 ALA B 355 TRP B 357 SITE 2 AC2 6 HOH B2042 HOH B2050 SITE 1 AC3 7 TYR B 147 TYR B 297 LEU B 350 GLY B 395 SITE 2 AC3 7 HOH B2020 HOH B2042 HOH B2050 SITE 1 AC4 5 ARG B 134 ARG B 135 SER B 136 GLY B 137 SITE 2 AC4 5 HOH B2051 SITE 1 AC5 2 LYS B 386 ARG B 387 SITE 1 AC6 5 LYS A 18 LEU A 118 GLY A 121 SER A 122 SITE 2 AC6 5 ARG A 211 SITE 1 AC7 1 ARG B 211 SITE 1 AC8 4 PHE A 271 ARG A 274 ARG A 278 LYS B 75 SITE 1 AC9 2 ARG A 210 ARG A 211 SITE 1 BC1 4 GLY B 121 SER B 122 GLY B 123 ALA B 124 SITE 1 BC2 1 ARG A 135 SITE 1 BC3 5 MET A 183 CYS A 184 GLN A 185 LYS A 186 SITE 2 BC3 5 TYR A 188 SITE 1 BC4 3 MET B 183 TYR B 188 ARG B 210 CRYST1 66.689 66.689 157.460 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014995 0.008657 0.000000 0.00000 SCALE2 0.000000 0.017315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006351 0.00000 MTRIX1 1 -0.497900 -0.867200 -0.002531 133.30000 1 MTRIX2 1 -0.867200 0.497900 -0.000051 77.18000 1 MTRIX3 1 0.001304 0.002169 -1.000000 9.74700 1