data_5ABI # _entry.id 5ABI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5ABI PDBE EBI-64594 WWPDB D_1290064594 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2016-10-19 _pdbx_database_PDB_obs_spr.pdb_id 5GW6 _pdbx_database_PDB_obs_spr.replace_pdb_id 5ABI _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 5ABI _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-08-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lama, D.' 1 'Verma, C.S.' 2 'Brown, C.J.' 3 # _citation.id primary _citation.title 'Identification of a Water-Bridge Mediated Recognition Module at the Mrna CAP-Binding Interface of Eif4E' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lama, D.' 1 primary 'Verma, C.S.' 2 primary 'Brown, C.J.' 3 # _cell.entry_id 5ABI _cell.length_a 121.695 _cell.length_b 128.024 _cell.length_c 38.469 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ABI _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'EUKARYOTIC TRANSLATION INITIATION FACTOR 4E' 22703.631 1 ? YES 'UNP RESIDUES 23-217' ? 2 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 3 water nat water 18.015 109 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'EIF-4E, EIF4E, EIF-4F 25 KDA SUBUNIT, MRNA CAP-BINDING PROTEIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPM WEDAANARGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGR VYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV ; _entity_poly.pdbx_seq_one_letter_code_can ;MESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPM WEDAANARGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGR VYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 SER n 1 4 ASN n 1 5 GLN n 1 6 GLU n 1 7 VAL n 1 8 ALA n 1 9 ASN n 1 10 PRO n 1 11 GLU n 1 12 HIS n 1 13 TYR n 1 14 ILE n 1 15 LYS n 1 16 HIS n 1 17 PRO n 1 18 LEU n 1 19 GLN n 1 20 ASN n 1 21 ARG n 1 22 TRP n 1 23 ALA n 1 24 LEU n 1 25 TRP n 1 26 PHE n 1 27 PHE n 1 28 LYS n 1 29 ASN n 1 30 ASP n 1 31 LYS n 1 32 SER n 1 33 LYS n 1 34 THR n 1 35 TRP n 1 36 GLN n 1 37 ALA n 1 38 ASN n 1 39 LEU n 1 40 ARG n 1 41 LEU n 1 42 ILE n 1 43 SER n 1 44 LYS n 1 45 PHE n 1 46 ASP n 1 47 THR n 1 48 VAL n 1 49 GLU n 1 50 ASP n 1 51 PHE n 1 52 TRP n 1 53 ALA n 1 54 LEU n 1 55 TYR n 1 56 ASN n 1 57 HIS n 1 58 ILE n 1 59 GLN n 1 60 LEU n 1 61 SER n 1 62 SER n 1 63 ASN n 1 64 LEU n 1 65 MET n 1 66 PRO n 1 67 GLY n 1 68 CYS n 1 69 ASP n 1 70 TYR n 1 71 SER n 1 72 LEU n 1 73 PHE n 1 74 LYS n 1 75 ASP n 1 76 GLY n 1 77 ILE n 1 78 GLU n 1 79 PRO n 1 80 MET n 1 81 TRP n 1 82 GLU n 1 83 ASP n 1 84 ALA n 1 85 ALA n 1 86 ASN n 1 87 ALA n 1 88 ARG n 1 89 GLY n 1 90 GLY n 1 91 ARG n 1 92 TRP n 1 93 LEU n 1 94 ILE n 1 95 THR n 1 96 LEU n 1 97 ASN n 1 98 LYS n 1 99 GLN n 1 100 GLN n 1 101 ARG n 1 102 ARG n 1 103 SER n 1 104 ASP n 1 105 LEU n 1 106 ASP n 1 107 ARG n 1 108 PHE n 1 109 TRP n 1 110 LEU n 1 111 GLU n 1 112 THR n 1 113 LEU n 1 114 LEU n 1 115 CYS n 1 116 LEU n 1 117 ILE n 1 118 GLY n 1 119 GLU n 1 120 SER n 1 121 PHE n 1 122 ASP n 1 123 ASP n 1 124 TYR n 1 125 SER n 1 126 ASP n 1 127 ASP n 1 128 VAL n 1 129 CYS n 1 130 GLY n 1 131 ALA n 1 132 VAL n 1 133 VAL n 1 134 ASN n 1 135 VAL n 1 136 ARG n 1 137 ALA n 1 138 LYS n 1 139 GLY n 1 140 ASP n 1 141 LYS n 1 142 ILE n 1 143 ALA n 1 144 ILE n 1 145 TRP n 1 146 THR n 1 147 THR n 1 148 GLU n 1 149 CYS n 1 150 GLU n 1 151 ASN n 1 152 ARG n 1 153 GLU n 1 154 ALA n 1 155 VAL n 1 156 THR n 1 157 HIS n 1 158 ILE n 1 159 GLY n 1 160 ARG n 1 161 VAL n 1 162 TYR n 1 163 LYS n 1 164 GLU n 1 165 ARG n 1 166 LEU n 1 167 GLY n 1 168 LEU n 1 169 PRO n 1 170 PRO n 1 171 LYS n 1 172 ILE n 1 173 VAL n 1 174 ILE n 1 175 GLY n 1 176 TYR n 1 177 GLN n 1 178 SER n 1 179 HIS n 1 180 ALA n 1 181 ASP n 1 182 THR n 1 183 ALA n 1 184 THR n 1 185 LYS n 1 186 SER n 1 187 GLY n 1 188 SER n 1 189 THR n 1 190 THR n 1 191 LYS n 1 192 ASN n 1 193 ARG n 1 194 PHE n 1 195 VAL n 1 196 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET11D _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IF4E_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P06730 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5ABI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 196 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06730 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 217 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 23 _struct_ref_seq.pdbx_auth_seq_align_end 217 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5ABI MET A 1 ? UNP P06730 ? ? 'EXPRESSION TAG' 22 1 1 5ABI ALA A 84 ? UNP P06730 GLU 105 'ENGINEERED MUTATION' 105 2 1 5ABI ALA A 85 ? UNP P06730 LYS 106 'ENGINEERED MUTATION' 106 3 1 5ABI ALA A 87 ? UNP P06730 LYS 108 'ENGINEERED MUTATION' 108 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5ABI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3 _exptl_crystal.density_percent_sol 58.98 _exptl_crystal.description 'PHI ROTATION' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% PEG 5000 MME, 100MM TRIS BIS PH 5.0, 0.05M AMMONIUM SULPHATE' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSRRC BEAMLINE BL13B1' _diffrn_source.pdbx_synchrotron_site NSRRC _diffrn_source.pdbx_synchrotron_beamline BL13B1 _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5ABI _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 1.97 _reflns.number_obs 21660 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.20 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.5 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.97 _reflns_shell.d_res_low 2.04 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.32 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.40 _reflns_shell.pdbx_redundancy 4.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5ABI _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20519 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 88.20 _refine.ls_d_res_high 1.97 _refine.ls_percent_reflns_obs 99.23 _refine.ls_R_factor_obs 0.23171 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23048 _refine.ls_R_factor_R_free 0.25416 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1105 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.913 _refine.correlation_coeff_Fo_to_Fc_free 0.899 _refine.B_iso_mean 20.014 _refine.aniso_B[1][1] -0.31 _refine.aniso_B[2][2] -0.67 _refine.aniso_B[3][3] 0.97 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES WITH TLS ADDED' _refine.pdbx_starting_model 'PDB ENTRY 2W97' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.158 _refine.pdbx_overall_ESU_R_Free 0.144 _refine.overall_SU_ML 0.112 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.867 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1501 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 109 _refine_hist.number_atoms_total 1628 _refine_hist.d_res_high 1.97 _refine_hist.d_res_low 88.20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.019 ? 1554 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1462 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.228 1.932 ? 2099 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.897 3.000 ? 3350 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.049 5.000 ? 180 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.539 23.544 ? 79 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.142 15.000 ? 266 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.855 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.077 0.200 ? 223 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1735 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 387 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.588 0.702 ? 726 'X-RAY DIFFRACTION' ? r_mcbond_other 0.588 0.702 ? 725 'X-RAY DIFFRACTION' ? r_mcangle_it 1.126 1.048 ? 904 'X-RAY DIFFRACTION' ? r_mcangle_other 1.125 1.048 ? 905 'X-RAY DIFFRACTION' ? r_scbond_it 0.223 0.797 ? 826 'X-RAY DIFFRACTION' ? r_scbond_other 0.223 0.797 ? 826 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 0.516 1.157 ? 1195 'X-RAY DIFFRACTION' ? r_long_range_B_refined 4.721 6.494 ? 1868 'X-RAY DIFFRACTION' ? r_long_range_B_other 4.721 6.494 ? 1868 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.971 _refine_ls_shell.d_res_low 2.022 _refine_ls_shell.number_reflns_R_work 1489 _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.percent_reflns_obs 97.31 _refine_ls_shell.R_factor_R_free 0.325 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5ABI _struct.title 'Identification of a Water-Bridge Mediated Recognition Module at the mRNA Cap-Binding Interface of eIF4E' _struct.pdbx_descriptor 'EUKARYOTIC TRANSLATION INITIATION FACTOR 4E' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5ABI _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text 'TRANSLATION, EIF4E, CAP BINDING, PROTEIN TRANSLATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 48 ? ILE A 58 ? VAL A 69 ILE A 79 1 ? 11 HELX_P HELX_P2 2 LEU A 60 ? LEU A 64 ? LEU A 81 LEU A 85 5 ? 5 HELX_P HELX_P3 3 ASN A 97 ? ASP A 104 ? ASN A 118 ASP A 125 1 ? 8 HELX_P HELX_P4 4 ASP A 104 ? GLY A 118 ? ASP A 125 GLY A 139 1 ? 15 HELX_P HELX_P5 5 PHE A 121 ? ASP A 126 ? PHE A 142 ASP A 147 5 ? 6 HELX_P HELX_P6 6 ASN A 151 ? GLY A 167 ? ASN A 172 GLY A 188 1 ? 17 HELX_P HELX_P7 7 HIS A 179 ? LYS A 185 ? HIS A 200 LYS A 206 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 36 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 57 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 ALA _struct_mon_prot_cis.pdbx_label_seq_id_2 37 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ALA _struct_mon_prot_cis.pdbx_auth_seq_id_2 58 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -12.05 # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel AA 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 39 ? THR A 47 ? LEU A 60 THR A 68 AA 2 PRO A 17 ? LYS A 28 ? PRO A 38 LYS A 49 AA 3 CYS A 68 ? LYS A 74 ? CYS A 89 LYS A 95 AA 4 VAL A 128 ? ASN A 134 ? VAL A 149 ASN A 155 AA 5 ASP A 140 ? THR A 146 ? ASP A 161 THR A 167 AA 6 GLY A 90 ? LEU A 96 ? GLY A 111 LEU A 117 AA 7 ILE A 174 ? SER A 178 ? ILE A 195 SER A 199 AA 8 PHE A 194 ? VAL A 196 ? PHE A 215 VAL A 217 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 O ASP A 46 ? O ASP A 67 N LEU A 18 ? N LEU A 39 AA 2 3 N PHE A 27 ? N PHE A 48 O ASP A 69 ? O ASP A 90 AA 3 4 N LYS A 74 ? N LYS A 95 O CYS A 129 ? O CYS A 150 AA 4 5 N ASN A 134 ? N ASN A 155 O LYS A 141 ? O LYS A 162 AA 5 6 N THR A 146 ? N THR A 167 O GLY A 90 ? O GLY A 111 AA 6 7 N LEU A 93 ? N LEU A 114 O GLY A 175 ? O GLY A 196 AA 7 8 N TYR A 176 ? N TYR A 197 O PHE A 194 ? O PHE A 215 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 1218' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL A 1219' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 1220' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 TRP A 81 ? TRP A 102 . ? 1_555 ? 2 AC1 7 ARG A 91 ? ARG A 112 . ? 1_555 ? 3 AC1 7 TRP A 145 ? TRP A 166 . ? 1_555 ? 4 AC1 7 HIS A 179 ? HIS A 200 . ? 1_555 ? 5 AC1 7 THR A 182 ? THR A 203 . ? 1_555 ? 6 AC1 7 ALA A 183 ? ALA A 204 . ? 1_555 ? 7 AC1 7 HOH E . ? HOH A 2053 . ? 1_555 ? 8 AC2 5 ILE A 94 ? ILE A 115 . ? 1_555 ? 9 AC2 5 THR A 95 ? THR A 116 . ? 1_555 ? 10 AC2 5 LEU A 96 ? LEU A 117 . ? 1_555 ? 11 AC2 5 GLN A 100 ? GLN A 121 . ? 1_555 ? 12 AC2 5 HOH E . ? HOH A 2103 . ? 1_555 ? 13 AC3 7 PHE A 27 ? PHE A 48 . ? 1_555 ? 14 AC3 7 TRP A 35 ? TRP A 56 . ? 1_555 ? 15 AC3 7 ASP A 69 ? ASP A 90 . ? 1_555 ? 16 AC3 7 PRO A 79 ? PRO A 100 . ? 1_555 ? 17 AC3 7 TRP A 145 ? TRP A 166 . ? 1_555 ? 18 AC3 7 HOH E . ? HOH A 2007 . ? 1_555 ? 19 AC3 7 HOH E . ? HOH A 2086 . ? 1_555 ? # _database_PDB_matrix.entry_id 5ABI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5ABI _atom_sites.fract_transf_matrix[1][1] 0.008217 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007811 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025995 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 22 ? ? ? A . n A 1 2 GLU 2 23 ? ? ? A . n A 1 3 SER 3 24 ? ? ? A . n A 1 4 ASN 4 25 ? ? ? A . n A 1 5 GLN 5 26 ? ? ? A . n A 1 6 GLU 6 27 ? ? ? A . n A 1 7 VAL 7 28 ? ? ? A . n A 1 8 ALA 8 29 ? ? ? A . n A 1 9 ASN 9 30 ? ? ? A . n A 1 10 PRO 10 31 ? ? ? A . n A 1 11 GLU 11 32 32 GLU GLU A . n A 1 12 HIS 12 33 33 HIS HIS A . n A 1 13 TYR 13 34 34 TYR TYR A . n A 1 14 ILE 14 35 35 ILE ILE A . n A 1 15 LYS 15 36 36 LYS LYS A . n A 1 16 HIS 16 37 37 HIS HIS A . n A 1 17 PRO 17 38 38 PRO PRO A . n A 1 18 LEU 18 39 39 LEU LEU A . n A 1 19 GLN 19 40 40 GLN GLN A . n A 1 20 ASN 20 41 41 ASN ASN A . n A 1 21 ARG 21 42 42 ARG ARG A . n A 1 22 TRP 22 43 43 TRP TRP A . n A 1 23 ALA 23 44 44 ALA ALA A . n A 1 24 LEU 24 45 45 LEU LEU A . n A 1 25 TRP 25 46 46 TRP TRP A . n A 1 26 PHE 26 47 47 PHE PHE A . n A 1 27 PHE 27 48 48 PHE PHE A . n A 1 28 LYS 28 49 49 LYS LYS A . n A 1 29 ASN 29 50 50 ASN ASN A . n A 1 30 ASP 30 51 51 ASP ASP A . n A 1 31 LYS 31 52 52 LYS LYS A . n A 1 32 SER 32 53 53 SER SER A . n A 1 33 LYS 33 54 54 LYS LYS A . n A 1 34 THR 34 55 55 THR THR A . n A 1 35 TRP 35 56 56 TRP TRP A . n A 1 36 GLN 36 57 57 GLN GLN A . n A 1 37 ALA 37 58 58 ALA ALA A . n A 1 38 ASN 38 59 59 ASN ASN A . n A 1 39 LEU 39 60 60 LEU LEU A . n A 1 40 ARG 40 61 61 ARG ARG A . n A 1 41 LEU 41 62 62 LEU LEU A . n A 1 42 ILE 42 63 63 ILE ILE A . n A 1 43 SER 43 64 64 SER SER A . n A 1 44 LYS 44 65 65 LYS LYS A . n A 1 45 PHE 45 66 66 PHE PHE A . n A 1 46 ASP 46 67 67 ASP ASP A . n A 1 47 THR 47 68 68 THR THR A . n A 1 48 VAL 48 69 69 VAL VAL A . n A 1 49 GLU 49 70 70 GLU GLU A . n A 1 50 ASP 50 71 71 ASP ASP A . n A 1 51 PHE 51 72 72 PHE PHE A . n A 1 52 TRP 52 73 73 TRP TRP A . n A 1 53 ALA 53 74 74 ALA ALA A . n A 1 54 LEU 54 75 75 LEU LEU A . n A 1 55 TYR 55 76 76 TYR TYR A . n A 1 56 ASN 56 77 77 ASN ASN A . n A 1 57 HIS 57 78 78 HIS HIS A . n A 1 58 ILE 58 79 79 ILE ILE A . n A 1 59 GLN 59 80 80 GLN GLN A . n A 1 60 LEU 60 81 81 LEU LEU A . n A 1 61 SER 61 82 82 SER SER A . n A 1 62 SER 62 83 83 SER SER A . n A 1 63 ASN 63 84 84 ASN ASN A . n A 1 64 LEU 64 85 85 LEU LEU A . n A 1 65 MET 65 86 86 MET MET A . n A 1 66 PRO 66 87 87 PRO PRO A . n A 1 67 GLY 67 88 88 GLY GLY A . n A 1 68 CYS 68 89 89 CYS CYS A . n A 1 69 ASP 69 90 90 ASP ASP A . n A 1 70 TYR 70 91 91 TYR TYR A . n A 1 71 SER 71 92 92 SER SER A . n A 1 72 LEU 72 93 93 LEU LEU A . n A 1 73 PHE 73 94 94 PHE PHE A . n A 1 74 LYS 74 95 95 LYS LYS A . n A 1 75 ASP 75 96 96 ASP ASP A . n A 1 76 GLY 76 97 97 GLY GLY A . n A 1 77 ILE 77 98 98 ILE ILE A . n A 1 78 GLU 78 99 99 GLU GLU A . n A 1 79 PRO 79 100 100 PRO PRO A . n A 1 80 MET 80 101 101 MET MET A . n A 1 81 TRP 81 102 102 TRP TRP A . n A 1 82 GLU 82 103 103 GLU GLU A . n A 1 83 ASP 83 104 104 ASP ASP A . n A 1 84 ALA 84 105 105 ALA ALA A . n A 1 85 ALA 85 106 106 ALA ALA A . n A 1 86 ASN 86 107 107 ASN ASN A . n A 1 87 ALA 87 108 108 ALA ALA A . n A 1 88 ARG 88 109 109 ARG ARG A . n A 1 89 GLY 89 110 110 GLY GLY A . n A 1 90 GLY 90 111 111 GLY GLY A . n A 1 91 ARG 91 112 112 ARG ARG A . n A 1 92 TRP 92 113 113 TRP TRP A . n A 1 93 LEU 93 114 114 LEU LEU A . n A 1 94 ILE 94 115 115 ILE ILE A . n A 1 95 THR 95 116 116 THR THR A . n A 1 96 LEU 96 117 117 LEU LEU A . n A 1 97 ASN 97 118 118 ASN ASN A . n A 1 98 LYS 98 119 119 LYS LYS A . n A 1 99 GLN 99 120 120 GLN GLN A . n A 1 100 GLN 100 121 121 GLN GLN A . n A 1 101 ARG 101 122 122 ARG ARG A . n A 1 102 ARG 102 123 123 ARG ARG A . n A 1 103 SER 103 124 124 SER SER A . n A 1 104 ASP 104 125 125 ASP ASP A . n A 1 105 LEU 105 126 126 LEU LEU A . n A 1 106 ASP 106 127 127 ASP ASP A . n A 1 107 ARG 107 128 128 ARG ARG A . n A 1 108 PHE 108 129 129 PHE PHE A . n A 1 109 TRP 109 130 130 TRP TRP A . n A 1 110 LEU 110 131 131 LEU LEU A . n A 1 111 GLU 111 132 132 GLU GLU A . n A 1 112 THR 112 133 133 THR THR A . n A 1 113 LEU 113 134 134 LEU LEU A . n A 1 114 LEU 114 135 135 LEU LEU A . n A 1 115 CYS 115 136 136 CYS CYS A . n A 1 116 LEU 116 137 137 LEU LEU A . n A 1 117 ILE 117 138 138 ILE ILE A . n A 1 118 GLY 118 139 139 GLY GLY A . n A 1 119 GLU 119 140 140 GLU GLU A . n A 1 120 SER 120 141 141 SER SER A . n A 1 121 PHE 121 142 142 PHE PHE A . n A 1 122 ASP 122 143 143 ASP ASP A . n A 1 123 ASP 123 144 144 ASP ASP A . n A 1 124 TYR 124 145 145 TYR TYR A . n A 1 125 SER 125 146 146 SER SER A . n A 1 126 ASP 126 147 147 ASP ASP A . n A 1 127 ASP 127 148 148 ASP ASP A . n A 1 128 VAL 128 149 149 VAL VAL A . n A 1 129 CYS 129 150 150 CYS CYS A . n A 1 130 GLY 130 151 151 GLY GLY A . n A 1 131 ALA 131 152 152 ALA ALA A . n A 1 132 VAL 132 153 153 VAL VAL A . n A 1 133 VAL 133 154 154 VAL VAL A . n A 1 134 ASN 134 155 155 ASN ASN A . n A 1 135 VAL 135 156 156 VAL VAL A . n A 1 136 ARG 136 157 157 ARG ARG A . n A 1 137 ALA 137 158 158 ALA ALA A . n A 1 138 LYS 138 159 159 LYS LYS A . n A 1 139 GLY 139 160 160 GLY GLY A . n A 1 140 ASP 140 161 161 ASP ASP A . n A 1 141 LYS 141 162 162 LYS LYS A . n A 1 142 ILE 142 163 163 ILE ILE A . n A 1 143 ALA 143 164 164 ALA ALA A . n A 1 144 ILE 144 165 165 ILE ILE A . n A 1 145 TRP 145 166 166 TRP TRP A . n A 1 146 THR 146 167 167 THR THR A . n A 1 147 THR 147 168 168 THR THR A . n A 1 148 GLU 148 169 169 GLU GLU A . n A 1 149 CYS 149 170 170 CYS CYS A . n A 1 150 GLU 150 171 171 GLU GLU A . n A 1 151 ASN 151 172 172 ASN ASN A . n A 1 152 ARG 152 173 173 ARG ARG A . n A 1 153 GLU 153 174 174 GLU GLU A . n A 1 154 ALA 154 175 175 ALA ALA A . n A 1 155 VAL 155 176 176 VAL VAL A . n A 1 156 THR 156 177 177 THR THR A . n A 1 157 HIS 157 178 178 HIS HIS A . n A 1 158 ILE 158 179 179 ILE ILE A . n A 1 159 GLY 159 180 180 GLY GLY A . n A 1 160 ARG 160 181 181 ARG ARG A . n A 1 161 VAL 161 182 182 VAL VAL A . n A 1 162 TYR 162 183 183 TYR TYR A . n A 1 163 LYS 163 184 184 LYS LYS A . n A 1 164 GLU 164 185 185 GLU GLU A . n A 1 165 ARG 165 186 186 ARG ARG A . n A 1 166 LEU 166 187 187 LEU LEU A . n A 1 167 GLY 167 188 188 GLY GLY A . n A 1 168 LEU 168 189 189 LEU LEU A . n A 1 169 PRO 169 190 190 PRO PRO A . n A 1 170 PRO 170 191 191 PRO PRO A . n A 1 171 LYS 171 192 192 LYS LYS A . n A 1 172 ILE 172 193 193 ILE ILE A . n A 1 173 VAL 173 194 194 VAL VAL A . n A 1 174 ILE 174 195 195 ILE ILE A . n A 1 175 GLY 175 196 196 GLY GLY A . n A 1 176 TYR 176 197 197 TYR TYR A . n A 1 177 GLN 177 198 198 GLN GLN A . n A 1 178 SER 178 199 199 SER SER A . n A 1 179 HIS 179 200 200 HIS HIS A . n A 1 180 ALA 180 201 201 ALA ALA A . n A 1 181 ASP 181 202 202 ASP ASP A . n A 1 182 THR 182 203 203 THR THR A . n A 1 183 ALA 183 204 204 ALA ALA A . n A 1 184 THR 184 205 205 THR THR A . n A 1 185 LYS 185 206 206 LYS LYS A . n A 1 186 SER 186 207 ? ? ? A . n A 1 187 GLY 187 208 ? ? ? A . n A 1 188 SER 188 209 ? ? ? A . n A 1 189 THR 189 210 ? ? ? A . n A 1 190 THR 190 211 211 THR THR A . n A 1 191 LYS 191 212 212 LYS LYS A . n A 1 192 ASN 192 213 213 ASN ASN A . n A 1 193 ARG 193 214 214 ARG ARG A . n A 1 194 PHE 194 215 215 PHE PHE A . n A 1 195 VAL 195 216 216 VAL VAL A . n A 1 196 VAL 196 217 217 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 1218 1218 GOL GOL A . C 2 GOL 1 1219 1219 GOL GOL A . D 2 GOL 1 1220 1220 GOL GOL A . E 3 HOH 1 2001 2001 HOH HOH A . E 3 HOH 2 2002 2002 HOH HOH A . E 3 HOH 3 2003 2003 HOH HOH A . E 3 HOH 4 2004 2004 HOH HOH A . E 3 HOH 5 2005 2005 HOH HOH A . E 3 HOH 6 2006 2006 HOH HOH A . E 3 HOH 7 2007 2007 HOH HOH A . E 3 HOH 8 2008 2008 HOH HOH A . E 3 HOH 9 2009 2009 HOH HOH A . E 3 HOH 10 2010 2010 HOH HOH A . E 3 HOH 11 2011 2011 HOH HOH A . E 3 HOH 12 2012 2012 HOH HOH A . E 3 HOH 13 2013 2013 HOH HOH A . E 3 HOH 14 2014 2014 HOH HOH A . E 3 HOH 15 2015 2015 HOH HOH A . E 3 HOH 16 2016 2016 HOH HOH A . E 3 HOH 17 2017 2017 HOH HOH A . E 3 HOH 18 2018 2018 HOH HOH A . E 3 HOH 19 2019 2019 HOH HOH A . E 3 HOH 20 2020 2020 HOH HOH A . E 3 HOH 21 2021 2021 HOH HOH A . E 3 HOH 22 2022 2022 HOH HOH A . E 3 HOH 23 2023 2023 HOH HOH A . E 3 HOH 24 2024 2024 HOH HOH A . E 3 HOH 25 2025 2025 HOH HOH A . E 3 HOH 26 2026 2026 HOH HOH A . E 3 HOH 27 2027 2027 HOH HOH A . E 3 HOH 28 2028 2028 HOH HOH A . E 3 HOH 29 2029 2029 HOH HOH A . E 3 HOH 30 2030 2030 HOH HOH A . E 3 HOH 31 2031 2031 HOH HOH A . E 3 HOH 32 2032 2032 HOH HOH A . E 3 HOH 33 2033 2033 HOH HOH A . E 3 HOH 34 2034 2034 HOH HOH A . E 3 HOH 35 2035 2035 HOH HOH A . E 3 HOH 36 2036 2036 HOH HOH A . E 3 HOH 37 2037 2037 HOH HOH A . E 3 HOH 38 2038 2038 HOH HOH A . E 3 HOH 39 2039 2039 HOH HOH A . E 3 HOH 40 2040 2040 HOH HOH A . E 3 HOH 41 2041 2041 HOH HOH A . E 3 HOH 42 2042 2042 HOH HOH A . E 3 HOH 43 2043 2043 HOH HOH A . E 3 HOH 44 2044 2044 HOH HOH A . E 3 HOH 45 2045 2045 HOH HOH A . E 3 HOH 46 2046 2046 HOH HOH A . E 3 HOH 47 2047 2047 HOH HOH A . E 3 HOH 48 2048 2048 HOH HOH A . E 3 HOH 49 2049 2049 HOH HOH A . E 3 HOH 50 2050 2050 HOH HOH A . E 3 HOH 51 2051 2051 HOH HOH A . E 3 HOH 52 2052 2052 HOH HOH A . E 3 HOH 53 2053 2053 HOH HOH A . E 3 HOH 54 2054 2054 HOH HOH A . E 3 HOH 55 2055 2055 HOH HOH A . E 3 HOH 56 2056 2056 HOH HOH A . E 3 HOH 57 2057 2057 HOH HOH A . E 3 HOH 58 2058 2058 HOH HOH A . E 3 HOH 59 2059 2059 HOH HOH A . E 3 HOH 60 2060 2060 HOH HOH A . E 3 HOH 61 2061 2061 HOH HOH A . E 3 HOH 62 2062 2062 HOH HOH A . E 3 HOH 63 2063 2063 HOH HOH A . E 3 HOH 64 2064 2064 HOH HOH A . E 3 HOH 65 2065 2065 HOH HOH A . E 3 HOH 66 2066 2066 HOH HOH A . E 3 HOH 67 2067 2067 HOH HOH A . E 3 HOH 68 2068 2068 HOH HOH A . E 3 HOH 69 2069 2069 HOH HOH A . E 3 HOH 70 2070 2070 HOH HOH A . E 3 HOH 71 2071 2071 HOH HOH A . E 3 HOH 72 2072 2072 HOH HOH A . E 3 HOH 73 2073 2073 HOH HOH A . E 3 HOH 74 2074 2074 HOH HOH A . E 3 HOH 75 2075 2075 HOH HOH A . E 3 HOH 76 2076 2076 HOH HOH A . E 3 HOH 77 2077 2077 HOH HOH A . E 3 HOH 78 2078 2078 HOH HOH A . E 3 HOH 79 2079 2079 HOH HOH A . E 3 HOH 80 2080 2080 HOH HOH A . E 3 HOH 81 2081 2081 HOH HOH A . E 3 HOH 82 2082 2082 HOH HOH A . E 3 HOH 83 2083 2083 HOH HOH A . E 3 HOH 84 2084 2084 HOH HOH A . E 3 HOH 85 2085 2085 HOH HOH A . E 3 HOH 86 2086 2086 HOH HOH A . E 3 HOH 87 2087 2087 HOH HOH A . E 3 HOH 88 2088 2088 HOH HOH A . E 3 HOH 89 2089 2089 HOH HOH A . E 3 HOH 90 2090 2090 HOH HOH A . E 3 HOH 91 2091 2091 HOH HOH A . E 3 HOH 92 2092 2092 HOH HOH A . E 3 HOH 93 2093 2093 HOH HOH A . E 3 HOH 94 2094 2094 HOH HOH A . E 3 HOH 95 2095 2095 HOH HOH A . E 3 HOH 96 2096 2096 HOH HOH A . E 3 HOH 97 2097 2097 HOH HOH A . E 3 HOH 98 2098 2098 HOH HOH A . E 3 HOH 99 2099 2099 HOH HOH A . E 3 HOH 100 2100 2100 HOH HOH A . E 3 HOH 101 2101 2101 HOH HOH A . E 3 HOH 102 2102 2102 HOH HOH A . E 3 HOH 103 2103 2103 HOH HOH A . E 3 HOH 104 2104 2104 HOH HOH A . E 3 HOH 105 2105 2105 HOH HOH A . E 3 HOH 106 2106 2106 HOH HOH A . E 3 HOH 107 2107 2107 HOH HOH A . E 3 HOH 108 2108 2108 HOH HOH A . E 3 HOH 109 2109 2109 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2018 ? E HOH . 2 1 A HOH 2108 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-02 2 'Structure model' 1 1 2016-10-19 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 165.3330 _pdbx_refine_tls.origin_y 19.2980 _pdbx_refine_tls.origin_z 3.5740 _pdbx_refine_tls.T[1][1] 0.2532 _pdbx_refine_tls.T[2][2] 0.1455 _pdbx_refine_tls.T[3][3] 0.0011 _pdbx_refine_tls.T[1][2] 0.0117 _pdbx_refine_tls.T[1][3] 0.0015 _pdbx_refine_tls.T[2][3] -0.0016 _pdbx_refine_tls.L[1][1] 0.4226 _pdbx_refine_tls.L[2][2] 0.4715 _pdbx_refine_tls.L[3][3] 0.5057 _pdbx_refine_tls.L[1][2] -0.0871 _pdbx_refine_tls.L[1][3] -0.0549 _pdbx_refine_tls.L[2][3] 0.0652 _pdbx_refine_tls.S[1][1] -0.0086 _pdbx_refine_tls.S[1][2] 0.0268 _pdbx_refine_tls.S[1][3] -0.0059 _pdbx_refine_tls.S[2][1] 0.0050 _pdbx_refine_tls.S[2][2] 0.0014 _pdbx_refine_tls.S[2][3] -0.0188 _pdbx_refine_tls.S[3][1] -0.0219 _pdbx_refine_tls.S[3][2] -0.0187 _pdbx_refine_tls.S[3][3] 0.0072 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 32 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 217 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0103 ? 1 MOSFLM 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 54 ? ? -63.63 4.15 2 1 THR A 55 ? ? 62.57 -54.62 3 1 GLN A 57 ? ? -5.11 96.14 4 1 ALA A 58 ? ? 36.42 -112.65 5 1 ASP A 67 ? ? -140.24 25.95 6 1 ASP A 143 ? ? 56.66 -121.95 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 22 ? A MET 1 2 1 Y 1 A GLU 23 ? A GLU 2 3 1 Y 1 A SER 24 ? A SER 3 4 1 Y 1 A ASN 25 ? A ASN 4 5 1 Y 1 A GLN 26 ? A GLN 5 6 1 Y 1 A GLU 27 ? A GLU 6 7 1 Y 1 A VAL 28 ? A VAL 7 8 1 Y 1 A ALA 29 ? A ALA 8 9 1 Y 1 A ASN 30 ? A ASN 9 10 1 Y 1 A PRO 31 ? A PRO 10 11 1 Y 1 A SER 207 ? A SER 186 12 1 Y 1 A GLY 208 ? A GLY 187 13 1 Y 1 A SER 209 ? A SER 188 14 1 Y 1 A THR 210 ? A THR 189 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH #