HEADER TRANSLATION 09-AUG-15 5ABX TITLE COMPLEX OF C. ELEGANS EIF4E-3 WITH THE 4E-BINDING PROTEIN MEXTLI AND TITLE 2 CAP ANALOG COMPND MOL_ID: 1; COMPND 2 MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 30-215; COMPND 5 SYNONYM: EIF-4E-3, EIF4E-3, EIF-4F 25 KDA SUBUNIT, MRNA CAP-BINDING COMPND 6 PROTEIN, EUKARYOTIC TRANSLATION INITIATION FACTOR 4E; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 4E-BINDING PROTEIN MEXTLI; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 471-507; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_COMMON: ROUNDWORM; SOURCE 4 ORGANISM_TAXID: 6239; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETMCN (PNYC); SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 13 ORGANISM_COMMON: ROUNDWORM; SOURCE 14 ORGANISM_TAXID: 6239; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_VECTOR: PETMCN (PNEA) KEYWDS TRANSLATION, GENE REGULATION, CAP BINDING PROTEIN, 4E BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.PETER,O.WEICHENRIEDER REVDAT 3 08-MAY-24 5ABX 1 REMARK LINK REVDAT 2 23-SEP-15 5ABX 1 JRNL REVDAT 1 02-SEP-15 5ABX 0 JRNL AUTH D.PETER,R.WEBER,C.KOENE,M.-Y.CHUNG,L.EBERTSCH,V.TRUFFAULT, JRNL AUTH 2 O.WEICHENRIEDER,C.IGREJA,E.IZAURRALDE JRNL TITL MEXTLI PROTEINS USE BOTH CANONICAL BIPARTITE AND NOVEL JRNL TITL 2 TRIPARTITE BINDING MODES TO FORM EIF4E COMPLEXES THAT JRNL TITL 3 DISPLAY DIFFERENTIAL SENSITIVITY TO 4E-BP REGULATION JRNL REF GENES DEV. V. 29 1835 2015 JRNL REFN ISSN 0890-9369 JRNL PMID 26294658 JRNL DOI 10.1101/GAD.269068.115 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 26447 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.2970 - 4.3491 1.00 2606 144 0.1692 0.1735 REMARK 3 2 4.3491 - 3.4525 1.00 2592 137 0.1469 0.1532 REMARK 3 3 3.4525 - 3.0162 1.00 2600 143 0.1734 0.2116 REMARK 3 4 3.0162 - 2.7404 1.00 2584 139 0.1702 0.1669 REMARK 3 5 2.7404 - 2.5440 1.00 2613 130 0.1749 0.1949 REMARK 3 6 2.5440 - 2.3941 1.00 2596 134 0.1613 0.1907 REMARK 3 7 2.3941 - 2.2742 1.00 2604 138 0.1641 0.1890 REMARK 3 8 2.2742 - 2.1752 1.00 2604 136 0.1721 0.2179 REMARK 3 9 2.1752 - 2.0914 1.00 2567 134 0.1737 0.2304 REMARK 3 10 2.0914 - 2.0193 1.00 2631 140 0.1860 0.2227 REMARK 3 11 2.0193 - 1.9561 1.00 2599 140 0.1855 0.2178 REMARK 3 12 1.9561 - 1.9002 1.00 2625 138 0.1914 0.2046 REMARK 3 13 1.9002 - 1.8502 1.00 2553 139 0.2090 0.2657 REMARK 3 14 1.8502 - 1.8051 1.00 2603 142 0.2154 0.2321 REMARK 3 15 1.8051 - 1.7640 1.00 2592 134 0.2315 0.2646 REMARK 3 16 1.7640 - 1.7265 1.00 2616 139 0.2317 0.2875 REMARK 3 17 1.7265 - 1.6919 1.00 2565 135 0.2464 0.2815 REMARK 3 18 1.6919 - 1.6600 1.00 2653 137 0.2488 0.2896 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1837 REMARK 3 ANGLE : 0.968 2506 REMARK 3 CHIRALITY : 0.038 270 REMARK 3 PLANARITY : 0.004 329 REMARK 3 DIHEDRAL : 12.455 694 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS WERE REFINED IN THE RIDING REMARK 3 POSITIONS. THE FOLLOWING RESIDUES WERE MODELED AS DOUBLE REMARK 3 CONFORMATIONS. CHAIN A, RESIDUE 135. CHAIN B, RESIDUES 479, 480, REMARK 3 500. THE FOLLOWING RESIDUES ARE DISORDERED. CHAIN A, RESIDUES REMARK 3 114 TO 120, 204 TO 209. CHAIN B, RESIDUES 484 TO 486. RESTRAINTS REMARK 3 FOR THE MGP LIGAND WERE GENERATED WITH GRADE. REMARK 4 REMARK 4 5ABX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1290064121. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00001 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : DYNAMICALLY BENDABLE MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26447 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 43.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.27000 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, PH=5.0, 0.01M REMARK 280 ZNCL2, 18% PEG6000, PH 5.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.64000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.52000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.52000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.32000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.52000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.52000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 63.96000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.52000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.52000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 21.32000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.52000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.52000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 63.96000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 42.64000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A1218 LIES ON A SPECIAL POSITION. REMARK 375 ZN ZN B1509 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2051 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 26 REMARK 465 PRO A 27 REMARK 465 HIS A 28 REMARK 465 MET A 29 REMARK 465 LYS A 114 REMARK 465 GLN A 115 REMARK 465 LYS A 116 REMARK 465 LEU A 117 REMARK 465 GLN A 118 REMARK 465 ARG A 119 REMARK 465 ARG A 120 REMARK 465 ARG A 204 REMARK 465 THR A 205 REMARK 465 SER A 206 REMARK 465 SER A 207 REMARK 465 THR A 208 REMARK 465 VAL A 209 REMARK 465 THR B 484 REMARK 465 LYS B 485 REMARK 465 ARG B 486 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 476 O HOH B 2010 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 62 26.81 -149.97 REMARK 500 ASP A 141 -126.62 54.57 REMARK 500 ARG A 170 79.16 -102.04 REMARK 500 ALA B 501 59.57 -142.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1508 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 46 OD2 REMARK 620 2 HOH A2022 O 96.0 REMARK 620 3 HIS B 469 NE2 105.4 115.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1218 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 62 OD2 REMARK 620 2 ASP A 62 OD2 78.7 REMARK 620 3 HOH A2014 O 124.9 115.7 REMARK 620 4 HOH A2014 O 115.7 124.9 99.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1217 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 126 ND1 REMARK 620 2 GLU A 130 OE2 118.7 REMARK 620 3 CL A1219 CL 120.7 93.9 REMARK 620 4 ASP B 491 OD1 89.0 143.2 91.1 REMARK 620 5 ASP B 491 OD2 115.9 92.7 109.7 51.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1509 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2004 O REMARK 620 2 HOH B2004 O 138.6 REMARK 620 N 1 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MGP A 1216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1219 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ABU RELATED DB: PDB REMARK 900 COMPLEX OF D. MELANOGASTER EIF4E WITH THE 4E-BINDING PROTEIN MEXTLI REMARK 900 AND CAP ANALOG REMARK 900 RELATED ID: 5ABV RELATED DB: PDB REMARK 900 COMPLEX OF D. MELANOGASTER EIF4E WITH THE 4E-BINDING PROTEIN MEXTLI REMARK 900 RELATED ID: 5ABY RELATED DB: PDB REMARK 900 COMPLEX OF C. ELEGANS EIF4E-3 WITH THE 4E-BINDING PROTEIN MEXTLI REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FIRST FOUR RESIDUES OF CHAIN A REMAIN FROM THE REMARK 999 EXPRESSION TAG. REMARK 999 THE FIRST FOUR RESIDUES OF CHAIN B REMAIN FROM THE REMARK 999 EXPRESSION TAG. DBREF 5ABX A 30 215 UNP O61955 IF4E3_CAEEL 30 215 DBREF 5ABX B 471 507 UNP Q9XW13 Q9XW13_CAEEL 471 507 SEQADV 5ABX GLY A 26 UNP O61955 EXPRESSION TAG SEQADV 5ABX PRO A 27 UNP O61955 EXPRESSION TAG SEQADV 5ABX HIS A 28 UNP O61955 EXPRESSION TAG SEQADV 5ABX MET A 29 UNP O61955 EXPRESSION TAG SEQADV 5ABX GLY B 467 UNP Q9XW13 EXPRESSION TAG SEQADV 5ABX PRO B 468 UNP Q9XW13 EXPRESSION TAG SEQADV 5ABX HIS B 469 UNP Q9XW13 EXPRESSION TAG SEQADV 5ABX MET B 470 UNP Q9XW13 EXPRESSION TAG SEQRES 1 A 190 GLY PRO HIS MET THR ARG HIS PRO LEU GLN ASN ARG TRP SEQRES 2 A 190 ALA LEU TRP TYR LEU LYS ALA ASP ARG ASN LYS GLU TRP SEQRES 3 A 190 GLU ASP CYS LEU LYS MET VAL SER LEU PHE ASP THR VAL SEQRES 4 A 190 GLU ASP PHE TRP SER LEU TYR ASN HIS ILE GLN SER ALA SEQRES 5 A 190 GLY GLY LEU ASN TRP GLY SER ASP TYR TYR LEU PHE LYS SEQRES 6 A 190 GLU GLY ILE LYS PRO MET TRP GLU ASP VAL ASN ASN VAL SEQRES 7 A 190 GLN GLY GLY ARG TRP LEU VAL VAL VAL ASP LYS GLN LYS SEQRES 8 A 190 LEU GLN ARG ARG THR GLN LEU LEU ASP HIS TYR TRP LEU SEQRES 9 A 190 GLU LEU LEU MET ALA ILE VAL GLY GLU GLN PHE ASP GLU SEQRES 10 A 190 TYR GLY ASP TYR ILE CYS GLY ALA VAL VAL ASN VAL ARG SEQRES 11 A 190 GLN LYS GLY ASP LYS VAL SER LEU TRP THR ARG ASP ALA SEQRES 12 A 190 THR ARG ASP ASP VAL ASN LEU ARG ILE GLY GLN VAL LEU SEQRES 13 A 190 LYS GLN LYS LEU SER ILE PRO ASP THR GLU ILE LEU ARG SEQRES 14 A 190 TYR GLU VAL HIS LYS ASP SER SER ALA ARG THR SER SER SEQRES 15 A 190 THR VAL LYS PRO ARG ILE CYS LEU SEQRES 1 B 41 GLY PRO HIS MET ILE ARG TYR ASN ARG ASP THR LEU MET SEQRES 2 B 41 THR ALA ARG ASP THR LYS ARG ALA PRO ILE PRO ASP GLU SEQRES 3 B 41 MET LEU GLN GLU ILE ASN ARG VAL ALA PRO ASP ILE LEU SEQRES 4 B 41 ILE ALA HET MGP A1216 52 HET ZN A1217 1 HET ZN A1218 1 HET CL A1219 1 HET ZN B1508 1 HET ZN B1509 1 HETNAM MGP 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 3 MGP C11 H19 N5 O14 P3 1+ FORMUL 4 ZN 4(ZN 2+) FORMUL 6 CL CL 1- FORMUL 9 HOH *137(H2 O) HELIX 1 1 VAL A 64 HIS A 73 1 10 HELIX 2 2 THR A 121 VAL A 136 1 16 HELIX 3 3 ASP A 171 LEU A 185 1 15 HELIX 4 4 HIS A 198 SER A 202 1 5 HELIX 5 5 ARG B 475 ARG B 482 1 8 HELIX 6 6 ASP B 491 VAL B 500 1 10 SHEET 1 AA 8 LEU A 55 THR A 63 0 SHEET 2 AA 8 PRO A 33 LEU A 43 -1 N LEU A 34 O ASP A 62 SHEET 3 AA 8 ASP A 85 LYS A 90 -1 O ASP A 85 N LEU A 43 SHEET 4 AA 8 ILE A 147 ASN A 153 -1 O CYS A 148 N LYS A 90 SHEET 5 AA 8 ASP A 159 THR A 165 -1 O LYS A 160 N ASN A 153 SHEET 6 AA 8 GLY A 106 VAL A 112 -1 O GLY A 106 N THR A 165 SHEET 7 AA 8 LEU A 193 VAL A 197 -1 O ARG A 194 N LEU A 109 SHEET 8 AA 8 ILE A 213 LEU A 215 -1 O ILE A 213 N TYR A 195 LINK OD2 ASP A 46 ZN ZN B1508 3555 1555 2.17 LINK OD2 ASP A 62 ZN ZN A1218 1555 1555 2.08 LINK OD2 ASP A 62 ZN ZN A1218 7556 1555 2.08 LINK ND1 HIS A 126 ZN ZN A1217 1555 1555 1.92 LINK OE2 GLU A 130 ZN ZN A1217 1555 1555 2.11 LINK ZN ZN A1217 CL CL A1219 1555 1555 2.30 LINK ZN ZN A1217 OD1 ASP B 491 1555 4554 2.70 LINK ZN ZN A1217 OD2 ASP B 491 1555 4554 2.24 LINK ZN ZN A1218 O HOH A2014 1555 7556 2.10 LINK ZN ZN A1218 O HOH A2014 1555 1555 2.10 LINK O HOH A2022 ZN ZN B1508 3555 1555 2.34 LINK NE2 HIS B 469 ZN ZN B1508 1555 1555 2.09 LINK ZN ZN B1509 O HOH B2004 1555 1555 2.15 LINK ZN ZN B1509 O HOH B2004 1555 7556 2.15 SITE 1 AC1 7 TRP A 51 MET A 96 TRP A 97 GLU A 98 SITE 2 AC1 7 ARG A 155 LYS A 160 HOH A2029 SITE 1 AC2 4 HIS A 126 GLU A 130 CL A1219 ASP B 491 SITE 1 AC3 3 ASP A 46 HOH A2022 HIS B 469 SITE 1 AC4 2 HIS B 469 HOH B2004 SITE 1 AC5 2 ASP A 62 HOH A2014 SITE 1 AC6 4 HIS A 126 GLU A 130 ZN A1217 ASP B 491 CRYST1 71.040 71.040 85.280 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014077 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011726 0.00000