HEADER LIGASE/RNA 05-FEB-15 5AH5 TITLE CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF AGROBACTERIUM RADIOBACTER TITLE 2 K84 AGNB2 LEURS-TRNA-LEUAMS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCINE--TRNA LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LEUCYL-TRNA SYNTHETASE; COMPND 5 EC: 6.1.1.4; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TRNA-LEU TAA ISOACCEPTOR; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM RADIOBACTER K84; SOURCE 3 ORGANISM_TAXID: 311403; SOURCE 4 ATCC: BAA-868; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET28A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS; SOURCE 13 ORGANISM_TAXID: 358; SOURCE 14 STRAIN: C58; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS LIGASE-RNA COMPLEX, LEUCINE-TRNA, LEUCINE-TRNA LIGASE ACTIVITY ATP + KEYWDS 2 L-LEUCINE + TRNA(LEU) GIVES AMP + DIPHOSPHATE + L-LEUCYL-TRNA(LEU), KEYWDS 3 AMINOACYL- TRNA EDITING ACTIVITY, AMINOACYL-TRNA SYNTHETASE, PROTEIN KEYWDS 4 BIOSYNTHESIS, TOXIC MOEITY 84 RESISTANCE EXPDTA X-RAY DIFFRACTION AUTHOR A.PALENCIA,S.CHOPRA,C.VIRUS,S.SCHULWITZ,B.R.TEMPLE,S.CUSACK, AUTHOR 2 J.S.READER REVDAT 3 10-JAN-24 5AH5 1 REMARK LINK REVDAT 2 19-OCT-16 5AH5 1 JRNL REVDAT 1 17-FEB-16 5AH5 0 JRNL AUTH S.CHOPRA,A.PALENCIA,C.VIRUS,S.SCHULWITZ,B.R.TEMPLE,S.CUSACK, JRNL AUTH 2 J.READER JRNL TITL STRUCTURAL CHARACTERIZATION OF ANTIBIOTIC SELF-IMMUNITY TRNA JRNL TITL 2 SYNTHETASE IN PLANT TUMOUR BIOCONTROL AGENT. JRNL REF NAT.COMMUN. V. 7 12928 2016 JRNL REFN ESSN 2041-1723 JRNL PMID 27713402 JRNL DOI 10.1038/NCOMMS12928 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 160330 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 8487 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 11686 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 635 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12364 REMARK 3 NUCLEIC ACID ATOMS : 3423 REMARK 3 HETEROGEN ATOMS : 91 REMARK 3 SOLVENT ATOMS : 871 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.16000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.79000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.177 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.165 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.133 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.191 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 16645 ; 0.016 ; 0.017 REMARK 3 BOND LENGTHS OTHERS (A): 13607 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 23394 ; 1.736 ; 1.789 REMARK 3 BOND ANGLES OTHERS (DEGREES): 31481 ; 1.137 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1570 ; 7.705 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 602 ;36.350 ;23.389 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2110 ;15.711 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 106 ;17.687 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2563 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 16397 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 3886 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6268 ; 4.058 ; 4.848 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 6268 ; 4.058 ; 4.848 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7827 ; 5.798 ; 7.239 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 7828 ; 5.798 ; 7.238 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 10377 ; 4.663 ; 5.308 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 10358 ; 4.644 ; 5.301 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 15533 ; 7.005 ; 7.860 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 20232 ; 9.179 ;41.549 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 19955 ; 9.164 ;41.541 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 5AH5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1290062943. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 160330 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 48.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.76000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2BTE, 4AS1 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.5, 0.2 M AMMONIUM REMARK 280 SULFATE, 27 % PEG 5000 MME REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.16000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 269 REMARK 465 PRO A 270 REMARK 465 ILE A 271 REMARK 465 PRO A 272 REMARK 465 SER A 273 REMARK 465 GLN A 274 REMARK 465 ALA A 339 REMARK 465 HIS A 340 REMARK 465 ILE A 359 REMARK 465 SER A 360 REMARK 465 THR A 361 REMARK 465 ASP A 362 REMARK 465 SER A 363 REMARK 465 ASP A 364 REMARK 465 ALA A 365 REMARK 465 THR A 366 REMARK 465 GLY A 367 REMARK 465 LEU A 368 REMARK 465 ASN A 369 REMARK 465 ILE A 370 REMARK 465 ALA A 371 REMARK 465 ASP A 372 REMARK 465 GLY A 373 REMARK 465 ILE A 374 REMARK 465 VAL A 375 REMARK 465 THR A 376 REMARK 465 ASN A 377 REMARK 465 HIS A 818 REMARK 465 HIS A 819 REMARK 465 HIS A 820 REMARK 465 HIS A 821 REMARK 465 HIS A 822 REMARK 465 MET B 1 REMARK 465 GLU B 268 REMARK 465 LEU B 269 REMARK 465 PRO B 270 REMARK 465 ILE B 271 REMARK 465 PRO B 272 REMARK 465 SER B 273 REMARK 465 GLN B 274 REMARK 465 MET B 275 REMARK 465 ALA B 339 REMARK 465 HIS B 340 REMARK 465 PHE B 351 REMARK 465 GLY B 352 REMARK 465 LEU B 353 REMARK 465 PRO B 354 REMARK 465 VAL B 355 REMARK 465 ARG B 356 REMARK 465 VAL B 357 REMARK 465 VAL B 358 REMARK 465 ILE B 359 REMARK 465 SER B 360 REMARK 465 THR B 361 REMARK 465 ASP B 362 REMARK 465 SER B 363 REMARK 465 ASP B 364 REMARK 465 ALA B 365 REMARK 465 THR B 366 REMARK 465 GLY B 367 REMARK 465 LEU B 368 REMARK 465 ASN B 369 REMARK 465 ILE B 370 REMARK 465 ALA B 371 REMARK 465 ASP B 372 REMARK 465 GLY B 373 REMARK 465 ILE B 374 REMARK 465 VAL B 375 REMARK 465 THR B 376 REMARK 465 ASN B 377 REMARK 465 SER B 378 REMARK 465 HIS B 379 REMARK 465 SER B 380 REMARK 465 LEU B 381 REMARK 465 VAL B 382 REMARK 465 ASP B 383 REMARK 465 GLY B 384 REMARK 465 LEU B 385 REMARK 465 HIS B 818 REMARK 465 HIS B 819 REMARK 465 HIS B 820 REMARK 465 HIS B 821 REMARK 465 HIS B 822 REMARK 465 U C 33 REMARK 465 U C 34 REMARK 465 A C 35 REMARK 465 A C 36 REMARK 465 U D 34 REMARK 465 A D 35 REMARK 465 A D 36 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 C D 3 N4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2' A D 7 OP2 G D 49 2.11 REMARK 500 O6 G C 53 O HOH C 2066 2.13 REMARK 500 O HOH B 2036 O HOH B 2088 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 G C 1 P G C 1 OP3 -0.116 REMARK 500 G D 1 P G D 1 OP3 -0.121 REMARK 500 A D 22 O3' C D 23 P -0.074 REMARK 500 G D 46E O5' G D 46E C5' -0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 108 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 194 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 194 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 199 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP A 492 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP A 593 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 20 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 20 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 MET B 63 CG - SD - CE ANGL. DEV. = 10.6 DEGREES REMARK 500 ARG B 67 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG B 67 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 199 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 421 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG B 421 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG B 464 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 713 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG B 713 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 VAL B 736 CB - CA - C ANGL. DEV. = -11.8 DEGREES REMARK 500 C C 4 O5' - P - OP2 ANGL. DEV. = -7.7 DEGREES REMARK 500 A C 13 O5' - C5' - C4' ANGL. DEV. = -5.0 DEGREES REMARK 500 U C 16 O5' - P - OP2 ANGL. DEV. = 8.3 DEGREES REMARK 500 A D 13 O5' - C5' - C4' ANGL. DEV. = -5.5 DEGREES REMARK 500 A D 21 O5' - P - OP2 ANGL. DEV. = -6.3 DEGREES REMARK 500 G D 46E C2' - C3' - O3' ANGL. DEV. = 10.0 DEGREES REMARK 500 G D 70 O5' - P - OP2 ANGL. DEV. = -6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 186 139.84 -175.48 REMARK 500 ARG A 276 48.46 -91.58 REMARK 500 ASN A 310 100.26 -54.59 REMARK 500 ARG A 356 -146.41 -78.08 REMARK 500 SER A 380 -111.76 66.70 REMARK 500 LEU A 385 131.53 -36.49 REMARK 500 SER A 387 -59.45 -25.88 REMARK 500 LEU A 402 39.37 89.02 REMARK 500 LEU A 532 -93.56 -109.01 REMARK 500 ARG A 766 -176.12 -173.28 REMARK 500 ASN A 806 13.61 58.77 REMARK 500 ARG A 807 -57.31 -128.96 REMARK 500 GLU B 235 -72.34 -55.75 REMARK 500 ALA B 236 58.68 -91.92 REMARK 500 ASP B 238 -86.46 -82.67 REMARK 500 ALA B 277 -72.44 -63.14 REMARK 500 ALA B 296 -165.40 -103.94 REMARK 500 LEU B 312 -70.80 -71.93 REMARK 500 ILE B 335 79.60 -151.10 REMARK 500 SER B 387 -33.19 -135.83 REMARK 500 LEU B 402 51.54 29.52 REMARK 500 LEU B 532 -102.80 -114.11 REMARK 500 ARG B 766 -177.94 -176.89 REMARK 500 ASN B 806 15.56 51.80 REMARK 500 ARG B 807 -60.49 -120.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 531 LEU A 532 135.79 REMARK 500 ILE B 265 LEU B 266 149.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2025 DISTANCE = 6.21 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 900 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 432 SG REMARK 620 2 CYS A 435 SG 111.6 REMARK 620 3 CYS A 473 SG 109.1 117.0 REMARK 620 4 CYS A 476 SG 106.3 110.4 101.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 900 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 432 SG REMARK 620 2 CYS B 435 SG 108.5 REMARK 620 3 CYS B 473 SG 106.3 110.6 REMARK 620 4 CYS B 476 SG 108.9 116.4 105.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LSS A 1818 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LSS B 1818 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 1077 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 1077 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1078 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 1078 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1819 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1819 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1820 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AGH RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LEURS EDITING DOMAIN OF CANDIDA ALBICANS REMARK 900 MUTANT K510A REMARK 900 RELATED ID: 5AGI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LEURS EDITING DOMAIN OF CANDIDA ALBICANS REMARK 900 MUTANT K510A IN COMPLEX WITH THE ADDUCT FORMED BY AN2690-AMP REMARK 900 RELATED ID: 5AGJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LEURS EDITING DOMAIN OF CANDIDA ALBICANS REMARK 900 IN COMPLEX WITH THE ADDUCT AN2690-AMP REMARK 999 REMARK 999 SEQUENCE REMARK 999 CONTAINS A C-TERM TAG BELONGING TO THE EXPRESSION VECTOR REMARK 999 PET28-A DBREF 5AH5 A 1 814 UNP B9JQP8 B9JQP8_AGRRK 1 814 DBREF 5AH5 B 1 814 UNP B9JQP8 B9JQP8_AGRRK 1 814 DBREF 5AH5 C 1 76 PDB 5AH5 5AH5 1 76 DBREF 5AH5 D 1 76 PDB 5AH5 5AH5 1 76 SEQADV 5AH5 LEU A 815 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 GLU A 816 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS A 817 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS A 818 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS A 819 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS A 820 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS A 821 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS A 822 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 LEU B 815 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 GLU B 816 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS B 817 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS B 818 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS B 819 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS B 820 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS B 821 UNP B9JQP8 EXPRESSION TAG SEQADV 5AH5 HIS B 822 UNP B9JQP8 EXPRESSION TAG SEQRES 1 A 822 MET GLN TYR ASP HIS ARG SER ARG ASP ALA PHE TRP GLN SEQRES 2 A 822 GLN LYS TRP ASP GLU LYS ARG ILE PHE ASP TRP ASP PRO SEQRES 3 A 822 SER SER PRO GLY LYS LYS PHE TYR VAL LEU GLU MET PHE SEQRES 4 A 822 PRO TYR THR SER GLY HIS LEU HIS ILE GLY HIS VAL ARG SEQRES 5 A 822 ASN TYR SER MET GLY ASP THR LEU ALA ARG MET GLN ILE SEQRES 6 A 822 ALA ARG GLY TYR SER VAL LEU HIS PRO MET GLY TRP ASP SEQRES 7 A 822 SER PHE GLY LEU PRO ALA GLU ASN ALA ALA ARG LYS PHE SEQRES 8 A 822 GLY THR HIS PRO ALA LYS PHE THR GLN ASP ALA ILE ASP SEQRES 9 A 822 SER MET LYS ARG SER MET MET GLN LEU GLY PHE GLY TYR SEQRES 10 A 822 SER TRP ALA ASN GLU LEU ALA THR CYS SER PRO THR TYR SEQRES 11 A 822 VAL LEU ALA GLN GLN LYS LEU PHE LEU ASP LEU TYR ARG SEQRES 12 A 822 LYS GLY LEU ILE TYR ARG ASP ASP THR TYR VAL TYR TRP SEQRES 13 A 822 ASP PRO VAL GLU GLN THR VAL LEU ALA ALA GLU GLN VAL SEQRES 14 A 822 ILE ASP GLY LYS GLY TRP ARG SER GLY ALA ALA VAL TYR SEQRES 15 A 822 LYS ARG ARG THR PRO GLN TRP PHE VAL ASP ILE ARG SER SEQRES 16 A 822 TYR ALA ASP ARG LEU LEU ASP ASP LEU GLU SER LEU GLU SEQRES 17 A 822 GLY TRP PRO THR SER VAL ARG ASN ILE GLN ARG ASN TRP SEQRES 18 A 822 ILE GLY ARG THR GLU GLY ALA GLU VAL ARG PHE LEU VAL SEQRES 19 A 822 GLU ALA SER ASP LEU THR ILE ASN ALA PHE THR THR ARG SEQRES 20 A 822 LEU ASP THR LEU ALA GLY CYS THR PHE ILE ALA LEU ALA SEQRES 21 A 822 PRO GLU HIS THR ILE LEU ASP GLU LEU PRO ILE PRO SER SEQRES 22 A 822 GLN MET ARG ALA SER VAL LYS ASP TYR CYS GLU SER ILE SEQRES 23 A 822 LEU VAL LEU SER SER GLU GLU ARG SER ALA GLY ALA LYS SEQRES 24 A 822 SER GLY ILE PHE THR GLY LEU MET VAL VAL ASN PRO LEU SEQRES 25 A 822 ASN GLN GLU ARG VAL PRO LEU TYR VAL ALA ASN TYR VAL SEQRES 26 A 822 MET PRO ASP PHE GLY THR GLY ALA VAL ILE GLY VAL PRO SEQRES 27 A 822 ALA HIS ASP GLU ARG ASP ALA ASP PHE GLY ALA LEU PHE SEQRES 28 A 822 GLY LEU PRO VAL ARG VAL VAL ILE SER THR ASP SER ASP SEQRES 29 A 822 ALA THR GLY LEU ASN ILE ALA ASP GLY ILE VAL THR ASN SEQRES 30 A 822 SER HIS SER LEU VAL ASP GLY LEU THR SER SER ALA ALA SEQRES 31 A 822 ARG GLU ILE LEU ILE ALA HIS LEU SER GLU LYS LEU GLU SEQRES 32 A 822 GLY GLN LYS SER THR GLN TYR ARG LEU GLN ASN TRP SER SEQRES 33 A 822 ILE SER ARG GLN ARG TYR TRP GLY CYS PRO ILE PRO ILE SEQRES 34 A 822 ILE HIS CYS SER GLU CYS GLY THR ILE PRO VAL ALA GLU SEQRES 35 A 822 GLU GLN LEU PRO ILE LEU LEU PRO ASP HIS LEU ILE SER SEQRES 36 A 822 GLU GLY SER GLY SER PRO LEU SER ARG ASP GLU SER TRP SEQRES 37 A 822 MET LYS ALA LYS CYS PRO GLN CYS GLY GLY ASP ALA ALA SEQRES 38 A 822 ARG ASP PRO ASP THR MET ASP THR PHE VAL ASP SER SER SEQRES 39 A 822 TRP TYR PHE LEU ARG TYR PRO SER PRO SER SER PRO ASN SEQRES 40 A 822 PRO ILE ASP SER SER LEU CYS ASN LYS ILE ALA PRO ALA SEQRES 41 A 822 ASP VAL TYR ILE GLY GLY ILE GLU HIS ALA THR LEU HIS SEQRES 42 A 822 LEU ILE TYR SER ARG PHE ILE THR LYS VAL LEU HIS ASP SEQRES 43 A 822 LEU GLY TYR ILE GLU PHE ASP GLU PRO PHE VAL GLU LEU SEQRES 44 A 822 TYR ASN GLN GLY MET VAL ASN ASP VAL HIS GLY ARG LYS SEQRES 45 A 822 GLN SER LYS SER LEU GLY ASN VAL THR ASP PRO SER VAL SEQRES 46 A 822 VAL VAL GLN GLU PHE GLY ALA ASP ALA VAL ARG CYS TYR SEQRES 47 A 822 LEU LEU PHE LYS THR THR TYR ASN ALA PRO ILE ASN TRP SEQRES 48 A 822 GLU ASP SER GLY PRO GLN ALA MET ARG SER TYR LEU GLU SEQRES 49 A 822 ARG VAL CYS ARG LEU PHE THR ASN ASN LEU ASP ARG LEU SEQRES 50 A 822 ARG SER SER SER ALA ILE GLU ILE CYS PRO ASP ASP CYS SEQRES 51 A 822 GLU ASN GLU GLU ASP ARG GLU ILE ALA ARG GLN LEU GLN SEQRES 52 A 822 LEU ALA ILE GLY LYS VAL THR ALA ASP VAL GLU ARG PHE SEQRES 53 A 822 HIS PHE ASN ALA ALA ILE ALA ALA ILE MET SER VAL THR SEQRES 54 A 822 ASN LEU LEU TYR GLU LYS GLY GLY LYS ALA SER PRO THR SEQRES 55 A 822 VAL LEU ALA GLY SER LEU ARG LEU LEU VAL ARG LEU LEU SEQRES 56 A 822 ALA PRO PHE ALA PRO HIS ILE SER GLU GLU LEU TRP ALA SEQRES 57 A 822 LEU SER GLY CYS ASN SER LEU VAL ALA ALA GLU PRO TRP SEQRES 58 A 822 PRO THR ILE ASN GLU ARG LEU VAL GLN ALA GLU ASN ILE SEQRES 59 A 822 VAL LEU PRO VAL GLN ILE ASN GLY LYS LEU ILE ARG THR SEQRES 60 A 822 MET THR ILE PRO VAL ASN LEU ALA GLU GLU ASP ILE LEU SEQRES 61 A 822 SER THR VAL LEU ALA LEU PRO GLU VAL ARG SER ARG LEU SEQRES 62 A 822 SER ASP ARG ASP LEU LYS ASN TYR ARG TYR VAL PRO ASN SEQRES 63 A 822 ARG ILE ILE ASN LEU VAL VAL GLY LEU GLU HIS HIS HIS SEQRES 64 A 822 HIS HIS HIS SEQRES 1 B 822 MET GLN TYR ASP HIS ARG SER ARG ASP ALA PHE TRP GLN SEQRES 2 B 822 GLN LYS TRP ASP GLU LYS ARG ILE PHE ASP TRP ASP PRO SEQRES 3 B 822 SER SER PRO GLY LYS LYS PHE TYR VAL LEU GLU MET PHE SEQRES 4 B 822 PRO TYR THR SER GLY HIS LEU HIS ILE GLY HIS VAL ARG SEQRES 5 B 822 ASN TYR SER MET GLY ASP THR LEU ALA ARG MET GLN ILE SEQRES 6 B 822 ALA ARG GLY TYR SER VAL LEU HIS PRO MET GLY TRP ASP SEQRES 7 B 822 SER PHE GLY LEU PRO ALA GLU ASN ALA ALA ARG LYS PHE SEQRES 8 B 822 GLY THR HIS PRO ALA LYS PHE THR GLN ASP ALA ILE ASP SEQRES 9 B 822 SER MET LYS ARG SER MET MET GLN LEU GLY PHE GLY TYR SEQRES 10 B 822 SER TRP ALA ASN GLU LEU ALA THR CYS SER PRO THR TYR SEQRES 11 B 822 VAL LEU ALA GLN GLN LYS LEU PHE LEU ASP LEU TYR ARG SEQRES 12 B 822 LYS GLY LEU ILE TYR ARG ASP ASP THR TYR VAL TYR TRP SEQRES 13 B 822 ASP PRO VAL GLU GLN THR VAL LEU ALA ALA GLU GLN VAL SEQRES 14 B 822 ILE ASP GLY LYS GLY TRP ARG SER GLY ALA ALA VAL TYR SEQRES 15 B 822 LYS ARG ARG THR PRO GLN TRP PHE VAL ASP ILE ARG SER SEQRES 16 B 822 TYR ALA ASP ARG LEU LEU ASP ASP LEU GLU SER LEU GLU SEQRES 17 B 822 GLY TRP PRO THR SER VAL ARG ASN ILE GLN ARG ASN TRP SEQRES 18 B 822 ILE GLY ARG THR GLU GLY ALA GLU VAL ARG PHE LEU VAL SEQRES 19 B 822 GLU ALA SER ASP LEU THR ILE ASN ALA PHE THR THR ARG SEQRES 20 B 822 LEU ASP THR LEU ALA GLY CYS THR PHE ILE ALA LEU ALA SEQRES 21 B 822 PRO GLU HIS THR ILE LEU ASP GLU LEU PRO ILE PRO SER SEQRES 22 B 822 GLN MET ARG ALA SER VAL LYS ASP TYR CYS GLU SER ILE SEQRES 23 B 822 LEU VAL LEU SER SER GLU GLU ARG SER ALA GLY ALA LYS SEQRES 24 B 822 SER GLY ILE PHE THR GLY LEU MET VAL VAL ASN PRO LEU SEQRES 25 B 822 ASN GLN GLU ARG VAL PRO LEU TYR VAL ALA ASN TYR VAL SEQRES 26 B 822 MET PRO ASP PHE GLY THR GLY ALA VAL ILE GLY VAL PRO SEQRES 27 B 822 ALA HIS ASP GLU ARG ASP ALA ASP PHE GLY ALA LEU PHE SEQRES 28 B 822 GLY LEU PRO VAL ARG VAL VAL ILE SER THR ASP SER ASP SEQRES 29 B 822 ALA THR GLY LEU ASN ILE ALA ASP GLY ILE VAL THR ASN SEQRES 30 B 822 SER HIS SER LEU VAL ASP GLY LEU THR SER SER ALA ALA SEQRES 31 B 822 ARG GLU ILE LEU ILE ALA HIS LEU SER GLU LYS LEU GLU SEQRES 32 B 822 GLY GLN LYS SER THR GLN TYR ARG LEU GLN ASN TRP SER SEQRES 33 B 822 ILE SER ARG GLN ARG TYR TRP GLY CYS PRO ILE PRO ILE SEQRES 34 B 822 ILE HIS CYS SER GLU CYS GLY THR ILE PRO VAL ALA GLU SEQRES 35 B 822 GLU GLN LEU PRO ILE LEU LEU PRO ASP HIS LEU ILE SER SEQRES 36 B 822 GLU GLY SER GLY SER PRO LEU SER ARG ASP GLU SER TRP SEQRES 37 B 822 MET LYS ALA LYS CYS PRO GLN CYS GLY GLY ASP ALA ALA SEQRES 38 B 822 ARG ASP PRO ASP THR MET ASP THR PHE VAL ASP SER SER SEQRES 39 B 822 TRP TYR PHE LEU ARG TYR PRO SER PRO SER SER PRO ASN SEQRES 40 B 822 PRO ILE ASP SER SER LEU CYS ASN LYS ILE ALA PRO ALA SEQRES 41 B 822 ASP VAL TYR ILE GLY GLY ILE GLU HIS ALA THR LEU HIS SEQRES 42 B 822 LEU ILE TYR SER ARG PHE ILE THR LYS VAL LEU HIS ASP SEQRES 43 B 822 LEU GLY TYR ILE GLU PHE ASP GLU PRO PHE VAL GLU LEU SEQRES 44 B 822 TYR ASN GLN GLY MET VAL ASN ASP VAL HIS GLY ARG LYS SEQRES 45 B 822 GLN SER LYS SER LEU GLY ASN VAL THR ASP PRO SER VAL SEQRES 46 B 822 VAL VAL GLN GLU PHE GLY ALA ASP ALA VAL ARG CYS TYR SEQRES 47 B 822 LEU LEU PHE LYS THR THR TYR ASN ALA PRO ILE ASN TRP SEQRES 48 B 822 GLU ASP SER GLY PRO GLN ALA MET ARG SER TYR LEU GLU SEQRES 49 B 822 ARG VAL CYS ARG LEU PHE THR ASN ASN LEU ASP ARG LEU SEQRES 50 B 822 ARG SER SER SER ALA ILE GLU ILE CYS PRO ASP ASP CYS SEQRES 51 B 822 GLU ASN GLU GLU ASP ARG GLU ILE ALA ARG GLN LEU GLN SEQRES 52 B 822 LEU ALA ILE GLY LYS VAL THR ALA ASP VAL GLU ARG PHE SEQRES 53 B 822 HIS PHE ASN ALA ALA ILE ALA ALA ILE MET SER VAL THR SEQRES 54 B 822 ASN LEU LEU TYR GLU LYS GLY GLY LYS ALA SER PRO THR SEQRES 55 B 822 VAL LEU ALA GLY SER LEU ARG LEU LEU VAL ARG LEU LEU SEQRES 56 B 822 ALA PRO PHE ALA PRO HIS ILE SER GLU GLU LEU TRP ALA SEQRES 57 B 822 LEU SER GLY CYS ASN SER LEU VAL ALA ALA GLU PRO TRP SEQRES 58 B 822 PRO THR ILE ASN GLU ARG LEU VAL GLN ALA GLU ASN ILE SEQRES 59 B 822 VAL LEU PRO VAL GLN ILE ASN GLY LYS LEU ILE ARG THR SEQRES 60 B 822 MET THR ILE PRO VAL ASN LEU ALA GLU GLU ASP ILE LEU SEQRES 61 B 822 SER THR VAL LEU ALA LEU PRO GLU VAL ARG SER ARG LEU SEQRES 62 B 822 SER ASP ARG ASP LEU LYS ASN TYR ARG TYR VAL PRO ASN SEQRES 63 B 822 ARG ILE ILE ASN LEU VAL VAL GLY LEU GLU HIS HIS HIS SEQRES 64 B 822 HIS HIS HIS SEQRES 1 C 84 G C C C G C A U G G U G A SEQRES 2 C 84 A A U C G G U A A A C A C SEQRES 3 C 84 A U C G C A C U U A A A A SEQRES 4 C 84 U G C G C C G C C U C U G SEQRES 5 C 84 G C U U G C C G G U U C A SEQRES 6 C 84 A G U C C G G C U G C G G SEQRES 7 C 84 G C A C C A SEQRES 1 D 84 G C C C G C A U G G U G A SEQRES 2 D 84 A A U C G G U A A A C A C SEQRES 3 D 84 A U C G C A C U U A A A A SEQRES 4 D 84 U G C G C C G C C U C U G SEQRES 5 D 84 G C U U G C C G G U U C A SEQRES 6 D 84 A G U C C G G C U G C G G SEQRES 7 D 84 G C A C C A HET ZN A 900 1 HET LSS A1818 31 HET SO4 A1819 5 HET ZN B 900 1 HET LSS B1818 31 HET SO4 B1819 5 HET SO4 B1820 5 HET MN C1077 1 HET SO4 C1078 5 HET MN D1077 1 HET SO4 D1078 5 HETNAM ZN ZINC ION HETNAM LSS 5'-O-(L-LEUCYLSULFAMOYL)ADENOSINE HETNAM SO4 SULFATE ION HETNAM MN MANGANESE (II) ION HETSYN LSS 5-O-N-LEUCYL-SULFAMOYLADENOSINE FORMUL 5 ZN 2(ZN 2+) FORMUL 6 LSS 2(C16 H25 N7 O7 S) FORMUL 7 SO4 5(O4 S 2-) FORMUL 12 MN 2(MN 2+) FORMUL 16 HOH *871(H2 O) HELIX 1 1 ASP A 4 ARG A 20 1 17 HELIX 2 2 HIS A 47 ARG A 67 1 21 HELIX 3 3 GLY A 81 GLY A 92 1 12 HELIX 4 4 HIS A 94 LEU A 113 1 20 HELIX 5 5 SER A 118 GLU A 122 5 5 HELIX 6 6 SER A 127 LYS A 144 1 18 HELIX 7 7 ALA A 165 GLU A 167 5 3 HELIX 8 8 ILE A 193 SER A 195 5 3 HELIX 9 9 TYR A 196 ASP A 203 1 8 HELIX 10 10 PRO A 211 GLY A 223 1 13 HELIX 11 11 ARG A 247 CYS A 254 5 8 HELIX 12 12 HIS A 263 GLU A 268 5 6 HELIX 13 13 ALA A 277 VAL A 288 1 12 HELIX 14 14 SER A 290 ALA A 296 1 7 HELIX 15 15 GLU A 342 GLY A 352 1 11 HELIX 16 16 THR A 386 LEU A 402 1 17 HELIX 17 17 ALA A 441 LEU A 445 5 5 HELIX 18 18 PRO A 461 ARG A 464 5 4 HELIX 19 19 ASP A 465 MET A 469 1 5 HELIX 20 20 ASP A 488 SER A 494 1 7 HELIX 21 21 TRP A 495 ARG A 499 5 5 HELIX 22 22 ASP A 510 ALA A 518 1 9 HELIX 23 23 GLY A 526 ALA A 530 5 5 HELIX 24 24 LEU A 532 LEU A 547 1 16 HELIX 25 25 ASP A 582 GLY A 591 1 10 HELIX 26 26 GLY A 591 LYS A 602 1 12 HELIX 27 27 PRO A 616 ASN A 633 1 18 HELIX 28 28 ASN A 633 SER A 640 1 8 HELIX 29 29 CYS A 646 CYS A 650 5 5 HELIX 30 30 ASN A 652 ARG A 675 1 24 HELIX 31 31 HIS A 677 LYS A 695 1 19 HELIX 32 32 SER A 700 ALA A 716 1 17 HELIX 33 33 ALA A 719 SER A 730 1 12 HELIX 34 34 LEU A 735 GLU A 739 5 5 HELIX 35 35 ALA A 775 LEU A 786 1 12 HELIX 36 36 LEU A 786 SER A 794 1 9 HELIX 37 37 ASP B 4 ARG B 20 1 17 HELIX 38 38 HIS B 47 ARG B 67 1 21 HELIX 39 39 GLY B 81 GLY B 92 1 12 HELIX 40 40 HIS B 94 LEU B 113 1 20 HELIX 41 41 SER B 118 GLU B 122 5 5 HELIX 42 42 SER B 127 LYS B 144 1 18 HELIX 43 43 ALA B 165 GLU B 167 5 3 HELIX 44 44 ILE B 193 SER B 195 5 3 HELIX 45 45 TYR B 196 ASP B 203 1 8 HELIX 46 46 LEU B 204 LEU B 207 5 4 HELIX 47 47 PRO B 211 GLY B 223 1 13 HELIX 48 48 ARG B 247 LEU B 251 5 5 HELIX 49 49 ARG B 276 VAL B 288 1 13 HELIX 50 50 ASP B 341 ALA B 349 1 9 HELIX 51 51 SER B 387 LYS B 401 1 15 HELIX 52 52 ALA B 441 LEU B 445 5 5 HELIX 53 53 PRO B 461 ARG B 464 5 4 HELIX 54 54 ASP B 465 MET B 469 1 5 HELIX 55 55 ASP B 488 SER B 493 1 6 HELIX 56 56 SER B 494 ARG B 499 5 6 HELIX 57 57 ASP B 510 ALA B 518 1 9 HELIX 58 58 GLY B 526 ALA B 530 5 5 HELIX 59 59 LEU B 532 LEU B 547 1 16 HELIX 60 60 SER B 574 GLY B 578 5 5 HELIX 61 61 ASP B 582 GLY B 591 1 10 HELIX 62 62 GLY B 591 LYS B 602 1 12 HELIX 63 63 PRO B 616 ASN B 633 1 18 HELIX 64 64 ASN B 633 SER B 640 1 8 HELIX 65 65 CYS B 646 CYS B 650 5 5 HELIX 66 66 ASN B 652 ARG B 675 1 24 HELIX 67 67 HIS B 677 GLY B 696 1 20 HELIX 68 68 SER B 700 ALA B 716 1 17 HELIX 69 69 ALA B 719 SER B 730 1 12 HELIX 70 70 LEU B 735 GLU B 739 5 5 HELIX 71 71 ALA B 775 LEU B 786 1 12 HELIX 72 72 LEU B 786 LEU B 793 1 8 SHEET 1 AA 4 SER A 70 LEU A 72 0 SHEET 2 AA 4 LYS A 32 GLU A 37 1 O PHE A 33 N LEU A 72 SHEET 3 AA 4 ALA A 520 ILE A 524 1 N ASP A 521 O TYR A 34 SHEET 4 AA 4 PHE A 556 TYR A 560 1 N VAL A 557 O ALA A 520 SHEET 1 AB 4 THR A 162 LEU A 164 0 SHEET 2 AB 4 ILE A 147 ASP A 157 -1 O TYR A 155 N LEU A 164 SHEET 3 AB 4 TYR A 182 VAL A 191 -1 O TYR A 182 N TRP A 156 SHEET 4 AB 4 TRP A 415 SER A 416 -1 O TRP A 415 N VAL A 191 SHEET 1 AC 2 VAL A 169 ILE A 170 0 SHEET 2 AC 2 LYS A 173 GLY A 174 -1 O LYS A 173 N ILE A 170 SHEET 1 AD 3 ALA A 243 THR A 245 0 SHEET 2 AD 3 ARG A 224 VAL A 230 -1 O ALA A 228 N THR A 245 SHEET 3 AD 3 GLN A 405 TYR A 410 -1 O GLN A 405 N GLU A 229 SHEET 1 AE 3 LEU A 233 VAL A 234 0 SHEET 2 AE 3 GLY A 301 ASN A 310 -1 O VAL A 309 N LEU A 233 SHEET 3 AE 3 GLU A 315 ALA A 322 -1 O GLU A 315 N ASN A 310 SHEET 1 AF 3 SER A 418 ARG A 419 0 SHEET 2 AF 3 THR A 486 MET A 487 -1 O THR A 486 N ARG A 419 SHEET 3 AF 3 CYS A 425 PRO A 426 -1 O CYS A 425 N MET A 487 SHEET 1 AG 4 GLY A 436 PRO A 439 0 SHEET 2 AG 4 ILE A 429 CYS A 432 -1 O ILE A 430 N ILE A 438 SHEET 3 AG 4 ASP A 479 ARG A 482 -1 O ALA A 481 N HIS A 431 SHEET 4 AG 4 LYS A 470 LYS A 472 -1 O ALA A 471 N ALA A 480 SHEET 1 AH 2 VAL A 565 ASN A 566 0 SHEET 2 AH 2 ILE A 609 ASN A 610 1 O ILE A 609 N ASN A 566 SHEET 1 AI 4 LYS A 763 PRO A 771 0 SHEET 2 AI 4 ASN A 753 ILE A 760 -1 O ILE A 754 N ILE A 770 SHEET 3 AI 4 ILE A 808 VAL A 813 1 O ILE A 809 N GLN A 759 SHEET 4 AI 4 LEU A 798 VAL A 804 -1 N LYS A 799 O VAL A 812 SHEET 1 BA 4 SER B 70 LEU B 72 0 SHEET 2 BA 4 LYS B 32 GLU B 37 1 O PHE B 33 N LEU B 72 SHEET 3 BA 4 ALA B 520 ILE B 524 1 N ASP B 521 O TYR B 34 SHEET 4 BA 4 PHE B 556 TYR B 560 1 N VAL B 557 O ALA B 520 SHEET 1 BB 4 THR B 162 LEU B 164 0 SHEET 2 BB 4 ILE B 147 ASP B 157 -1 O TYR B 155 N LEU B 164 SHEET 3 BB 4 TYR B 182 VAL B 191 -1 O TYR B 182 N TRP B 156 SHEET 4 BB 4 TRP B 415 SER B 416 -1 O TRP B 415 N VAL B 191 SHEET 1 BC 2 VAL B 169 ILE B 170 0 SHEET 2 BC 2 LYS B 173 GLY B 174 -1 O LYS B 173 N ILE B 170 SHEET 1 BD 3 ALA B 243 THR B 245 0 SHEET 2 BD 3 ARG B 224 VAL B 230 -1 O ALA B 228 N THR B 245 SHEET 3 BD 3 GLY B 404 TYR B 410 -1 O GLN B 405 N GLU B 229 SHEET 1 BE 5 LEU B 233 VAL B 234 0 SHEET 2 BE 5 GLY B 301 ASN B 310 -1 O VAL B 309 N LEU B 233 SHEET 3 BE 5 GLU B 315 ALA B 322 -1 O GLU B 315 N ASN B 310 SHEET 4 BE 5 ILE B 257 LEU B 259 1 O ILE B 257 N TYR B 320 SHEET 5 BE 5 ALA B 333 VAL B 334 -1 O VAL B 334 N ALA B 258 SHEET 1 BF 3 SER B 418 ARG B 419 0 SHEET 2 BF 3 THR B 486 MET B 487 -1 O THR B 486 N ARG B 419 SHEET 3 BF 3 CYS B 425 PRO B 426 -1 O CYS B 425 N MET B 487 SHEET 1 BG 4 GLY B 436 PRO B 439 0 SHEET 2 BG 4 ILE B 429 CYS B 432 -1 O ILE B 430 N ILE B 438 SHEET 3 BG 4 ASP B 479 ARG B 482 -1 O ALA B 481 N HIS B 431 SHEET 4 BG 4 LYS B 470 LYS B 472 -1 O ALA B 471 N ALA B 480 SHEET 1 BH 2 VAL B 565 ASN B 566 0 SHEET 2 BH 2 ILE B 609 ASN B 610 1 O ILE B 609 N ASN B 566 SHEET 1 BI 4 LYS B 763 PRO B 771 0 SHEET 2 BI 4 ASN B 753 ILE B 760 -1 O ILE B 754 N ILE B 770 SHEET 3 BI 4 ILE B 808 VAL B 813 1 O ILE B 809 N GLN B 759 SHEET 4 BI 4 LEU B 798 VAL B 804 -1 N LYS B 799 O VAL B 812 LINK SG CYS A 432 ZN ZN A 900 1555 1555 2.41 LINK SG CYS A 435 ZN ZN A 900 1555 1555 2.38 LINK SG CYS A 473 ZN ZN A 900 1555 1555 2.32 LINK SG CYS A 476 ZN ZN A 900 1555 1555 2.66 LINK SG CYS B 432 ZN ZN B 900 1555 1555 2.41 LINK SG CYS B 435 ZN ZN B 900 1555 1555 2.23 LINK SG CYS B 473 ZN ZN B 900 1555 1555 2.34 LINK SG CYS B 476 ZN ZN B 900 1555 1555 2.59 LINK N7 G C 1 MN MN C1077 1555 1555 2.03 LINK N7 G D 1 MN MN D1077 1555 1555 2.31 CISPEP 1 LEU A 445 PRO A 446 0 -2.41 CISPEP 2 ALA A 518 PRO A 519 0 4.65 CISPEP 3 LEU B 445 PRO B 446 0 1.98 CISPEP 4 ALA B 518 PRO B 519 0 1.79 SITE 1 AC1 4 CYS A 432 CYS A 435 CYS A 473 CYS A 476 SITE 1 AC2 4 CYS B 432 CYS B 435 CYS B 473 CYS B 476 SITE 1 AC3 24 MET A 38 PHE A 39 PRO A 40 TYR A 41 SITE 2 AC3 24 HIS A 47 GLY A 49 HIS A 50 ASN A 53 SITE 3 AC3 24 TYR A 54 ASP A 78 SER A 493 TYR A 496 SITE 4 AC3 24 TYR A 523 GLY A 525 GLY A 526 GLU A 528 SITE 5 AC3 24 HIS A 529 HIS A 533 GLN A 562 GLY A 563 SITE 6 AC3 24 MET A 564 VAL A 565 HOH A2034 HOH A2231 SITE 1 AC4 25 MET B 38 PHE B 39 PRO B 40 TYR B 41 SITE 2 AC4 25 HIS B 47 GLY B 49 HIS B 50 ASN B 53 SITE 3 AC4 25 TYR B 54 ASP B 78 SER B 493 TYR B 496 SITE 4 AC4 25 TYR B 523 GLY B 525 GLY B 526 GLU B 528 SITE 5 AC4 25 HIS B 529 HIS B 533 GLN B 562 GLY B 563 SITE 6 AC4 25 MET B 564 VAL B 565 HOH B2064 HOH B2266 SITE 7 AC4 25 HOH B2384 SITE 1 AC5 1 G C 1 SITE 1 AC6 1 G D 1 SITE 1 AC7 6 SER A 213 G C 5 G C 69 G C 70 SITE 2 AC7 6 HOH C2086 HOH C2089 SITE 1 AC8 5 SER B 213 G D 5 G D 69 G D 70 SITE 2 AC8 5 HOH D2074 SITE 1 AC9 5 ARG A 766 THR A 767 MET A 768 THR A 769 SITE 2 AC9 5 HOH A2302 SITE 1 BC1 3 LYS B 31 ARG B 67 TYR B 69 SITE 1 BC2 5 ARG B 766 THR B 767 MET B 768 THR B 769 SITE 2 BC2 5 HOH B2366 CRYST1 169.910 50.320 170.520 90.00 93.48 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005885 0.000000 0.000358 0.00000 SCALE2 0.000000 0.019873 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005875 0.00000