HEADER HYDROLASE 13-FEB-15 5AIH TITLE DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC LIMONENE-1,2-EPOXIDE TITLE 2 HYDROLASES FROM HOT SPRING METAGENOMIC LIBRARIES. CH55-SAMPLE-NATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIMONENE-1,2-EPOXIDE HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.3.2.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 3 ORGANISM_TAXID: 32644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: 10G; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRHAM KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.FERRANDI,C.SAYER,M.N.ISUPOV,C.ANNOVAZZI,C.MARCHESI,G.IACOBONE, AUTHOR 2 X.PENG,E.BONCH-OSMOLOVSKAYA,R.WOHLGEMUTH,J.A.LITTLECHILD,D.MONTIA REVDAT 4 10-JAN-24 5AIH 1 REMARK REVDAT 3 12-AUG-15 5AIH 1 JRNL REVDAT 2 22-JUL-15 5AIH 1 JRNL REVDAT 1 17-JUN-15 5AIH 0 JRNL AUTH E.E.FERRANDI,C.SAYER,M.N.ISUPOV,C.ANNOVAZZI,C.MARCHESI, JRNL AUTH 2 G.IACOBONE,X.PENG,E.BONCH-OSMOLOVSKAYA,R.WOHLGEMUTH, JRNL AUTH 3 J.A.LITTLECHILD,D.MONTIA JRNL TITL DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC JRNL TITL 2 LIMONENE-1,2-EPOXIDE HYDROLASES FROM HOT SPRING METAGENOMIC JRNL TITL 3 LIBRARIES JRNL REF FEBS J. V. 282 2879 2015 JRNL REFN ISSN 1742-464X JRNL PMID 26032250 JRNL DOI 10.1111/FEBS.13328 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 47336 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2476 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.42 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3428 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE SET COUNT : 193 REMARK 3 BIN FREE R VALUE : 0.3570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1888 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 76 REMARK 3 SOLVENT ATOMS : 304 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.95000 REMARK 3 B22 (A**2) : -0.35000 REMARK 3 B33 (A**2) : 1.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.057 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.057 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.040 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.051 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2230 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2199 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3043 ; 1.603 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5027 ; 1.049 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 302 ; 6.178 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 102 ;31.839 ;22.941 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 346 ;12.341 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;18.432 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 361 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2547 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 520 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1090 ; 3.329 ; 5.129 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1089 ; 3.288 ; 5.116 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1373 ; 4.683 ; 8.643 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1140 ; 3.929 ; 5.986 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 5AIH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1290063049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49831 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 45.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.73000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1NWW REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.43000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.43000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.75000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.37000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.75000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.37000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.43000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.75000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.37000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 28.43000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.75000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.37000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 126 REMARK 465 PRO A 127 REMARK 465 SER A 128 REMARK 465 ALA A 129 REMARK 465 SER B 126 REMARK 465 PRO B 127 REMARK 465 SER B 128 REMARK 465 ALA B 129 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 51 O HOH A 2083 1.99 REMARK 500 O HOH B 2049 O HOH B 2050 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 18 70.69 -114.31 REMARK 500 ASP B 18 71.33 -114.35 REMARK 500 LEU B 53 67.32 -100.72 REMARK 500 PRO B 54 87.10 -57.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2009 DISTANCE = 6.81 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 309 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AIF RELATED DB: PDB REMARK 900 DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC LIMONENE-1 ,2- REMARK 900 EPOXIDE HYDROLASES FROM HOT SPRING METAGENOMIC LIBRARIES. TOMSK- REMARK 900 SAMPLE-NATIVE REMARK 900 RELATED ID: 5AIG RELATED DB: PDB REMARK 900 DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC LIMONENE-1 ,2- REMARK 900 EPOXIDE HYDROLASES FROM HOT SPRING METAGENOMIC LIBRARIES. TOMSK- REMARK 900 SAMPLE-VALPROMIDE COMPLEX REMARK 900 RELATED ID: 5AII RELATED DB: PDB REMARK 900 DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC LIMONENE-1 ,2- REMARK 900 EPOXIDE HYDROLASES FROM HOT SPRING METAGENOMIC LIBRARIES. CH55- REMARK 900 SAMPLE-PEG COMPLEX REMARK 999 REMARK 999 SEQUENCE REMARK 999 GENBANK KP765711 DBREF 5AIH A 1 129 PDB 5AIH 5AIH 1 129 DBREF 5AIH B 1 129 PDB 5AIH 5AIH 1 129 SEQRES 1 A 129 MET THR PRO LEU GLU THR VAL GLN LEU PHE LEU ALA ARG SEQRES 2 A 129 VAL ASN ALA LEU ASP LEU ASP GLY ALA CYS ALA LEU LEU SEQRES 3 A 129 ALA GLU ASP VAL VAL TYR ASP ASN VAL PRO MET PRO THR SEQRES 4 A 129 VAL HIS GLY ARG ALA ALA ALA ARG ALA PHE LEU SER GLN SEQRES 5 A 129 LEU PRO ALA THR ALA ILE ASP TRP GLU THR HIS ALA ILE SEQRES 6 A 129 ALA ALA THR GLY ASP ALA ALA ARG GLY THR VAL LEU THR SEQRES 7 A 129 GLU ARG THR ASP ARG PHE THR LEU ALA ASP GLY ARG THR SEQRES 8 A 129 LEU ALA ILE ARG VAL MET GLY ALA PHE ASP VAL ALA ASP SEQRES 9 A 129 GLY SER ILE THR ALA TRP ARG ASP TYR PHE ASP LEU GLY SEQRES 10 A 129 GLN PHE MET ALA GLN MET ALA PRO SER PRO SER ALA SEQRES 1 B 129 MET THR PRO LEU GLU THR VAL GLN LEU PHE LEU ALA ARG SEQRES 2 B 129 VAL ASN ALA LEU ASP LEU ASP GLY ALA CYS ALA LEU LEU SEQRES 3 B 129 ALA GLU ASP VAL VAL TYR ASP ASN VAL PRO MET PRO THR SEQRES 4 B 129 VAL HIS GLY ARG ALA ALA ALA ARG ALA PHE LEU SER GLN SEQRES 5 B 129 LEU PRO ALA THR ALA ILE ASP TRP GLU THR HIS ALA ILE SEQRES 6 B 129 ALA ALA THR GLY ASP ALA ALA ARG GLY THR VAL LEU THR SEQRES 7 B 129 GLU ARG THR ASP ARG PHE THR LEU ALA ASP GLY ARG THR SEQRES 8 B 129 LEU ALA ILE ARG VAL MET GLY ALA PHE ASP VAL ALA ASP SEQRES 9 B 129 GLY SER ILE THR ALA TRP ARG ASP TYR PHE ASP LEU GLY SEQRES 10 B 129 GLN PHE MET ALA GLN MET ALA PRO SER PRO SER ALA HET DMS A 201 4 HET DMS A 202 4 HET DMS A 203 4 HET DMS A 204 4 HET EDO A 300 4 HET EDO A 301 4 HET EDO A 302 4 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET EDO A 308 4 HET DMS B 200 8 HET DMS B 204 4 HET EDO B 300 4 HET EDO B 301 4 HET EDO B 302 4 HET EDO B 303 4 HET EDO B 307 4 HET EDO B 309 4 HETNAM DMS DIMETHYL SULFOXIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 DMS 6(C2 H6 O S) FORMUL 7 EDO 13(C2 H6 O2) FORMUL 22 HOH *304(H2 O) HELIX 1 1 THR A 2 ALA A 16 1 15 HELIX 2 2 ASP A 18 LEU A 25 1 8 HELIX 3 3 GLY A 42 SER A 51 1 10 HELIX 4 4 ASP A 115 ALA A 124 1 10 HELIX 5 5 THR B 2 ALA B 16 1 15 HELIX 6 6 ASP B 18 ALA B 24 1 7 HELIX 7 7 GLY B 42 GLN B 52 1 11 HELIX 8 8 ASP B 115 ALA B 121 1 7 SHEET 1 AA 6 VAL A 40 HIS A 41 0 SHEET 2 AA 6 LEU A 26 ASN A 34 -1 O TYR A 32 N VAL A 40 SHEET 3 AA 6 SER A 106 TYR A 113 1 O ILE A 107 N ALA A 27 SHEET 4 AA 6 THR A 91 ALA A 103 -1 O MET A 97 N TYR A 113 SHEET 5 AA 6 ARG A 73 LEU A 86 -1 O GLY A 74 N VAL A 102 SHEET 6 AA 6 ALA A 55 ALA A 67 -1 N THR A 56 O THR A 85 SHEET 1 BA 6 VAL B 40 HIS B 41 0 SHEET 2 BA 6 LEU B 26 ASN B 34 -1 O TYR B 32 N VAL B 40 SHEET 3 BA 6 SER B 106 TYR B 113 1 O ILE B 107 N ALA B 27 SHEET 4 BA 6 THR B 91 ALA B 103 -1 O MET B 97 N TYR B 113 SHEET 5 BA 6 ARG B 73 THR B 85 -1 O GLY B 74 N VAL B 102 SHEET 6 BA 6 ALA B 57 ALA B 67 -1 O ALA B 57 N THR B 85 SITE 1 AC1 4 ILE A 94 PHE A 114 PHE A 119 HOH A2126 SITE 1 AC2 7 ARG A 43 HOH A2160 ALA B 24 LEU B 25 SITE 2 AC2 7 LEU B 26 GLY B 105 SER B 106 SITE 1 AC3 4 LEU A 50 TRP A 60 PHE A 84 HOH A2159 SITE 1 AC4 3 ARG A 111 HOH A2026 HIS B 63 SITE 1 AC5 6 ALA A 57 ILE A 58 HOH A2030 HOH A2095 SITE 2 AC5 6 GLU B 5 LEU B 9 SITE 1 AC6 5 ASP A 59 GLU A 61 THR A 62 EDO B 301 SITE 2 AC6 5 HOH B2022 SITE 1 AC7 7 ALA A 57 PHE A 84 THR A 85 HOH A2095 SITE 2 AC7 7 HOH A2097 HOH A2161 GLU B 5 SITE 1 AC8 5 LEU A 17 ASP A 20 HOH A2035 HOH A2045 SITE 2 AC8 5 HOH A2047 SITE 1 AC9 8 ALA A 12 ASN A 15 HOH A2016 HOH A2031 SITE 2 AC9 8 ALA B 12 ASN B 15 HOH B2021 HOH B2027 SITE 1 BC1 7 PRO A 36 MET A 37 LEU A 116 MET A 120 SITE 2 BC1 7 MET A 123 ALA A 124 HOH A2162 SITE 1 BC2 9 ILE A 94 ARG A 95 PHE A 114 ASP A 115 SITE 2 BC2 9 GLN A 118 HOH A2134 HOH A2135 HOH A2151 SITE 3 BC2 9 VAL B 35 SITE 1 BC3 4 ASP B 82 PHE B 84 ILE B 94 ASP B 112 SITE 1 BC4 4 HIS A 63 GLU A 79 ARG B 111 HOH B2138 SITE 1 BC5 6 GLU A 5 LEU A 9 HOH A2018 ALA B 57 SITE 2 BC5 6 ILE B 58 HOH B2028 SITE 1 BC6 5 EDO A 301 HOH A2019 ASP B 59 GLU B 61 SITE 2 BC6 5 THR B 62 SITE 1 BC7 7 HOH A2018 ALA B 57 ASP B 59 PHE B 84 SITE 2 BC7 7 THR B 85 THR B 91 HOH B2139 SITE 1 BC8 5 ASP A 20 HOH A2047 ARG B 13 LEU B 25 SITE 2 BC8 5 HOH B2140 SITE 1 BC9 5 ARG A 47 ALA A 48 HOH A2080 MET B 1 SITE 2 BC9 5 HOH B2014 SITE 1 CC1 5 LEU B 17 ASP B 18 LEU B 19 ASP B 20 SITE 2 CC1 5 ARG B 47 CRYST1 91.500 100.740 56.860 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010929 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009927 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017587 0.00000 MTRIX1 1 0.862000 -0.507000 -0.006000 -15.99617 1 MTRIX2 1 -0.507000 -0.862000 -0.015000 -58.52837 1 MTRIX3 1 0.002000 0.016000 -1.000000 -30.46998 1