HEADER FLUORESCENT PROTEIN 24-FEB-15 5AJG TITLE STRUCTURE OF INFRARED FLUORESCENT PROTEIN IFP1.4 AT 1.11 ANGSTROM TITLE 2 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIOPHYTOCHROME; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-321; COMPND 5 SYNONYM: INFRARED FLUORESCENT PROTEIN IFP1.4, PHYTOCHROME-LIKE COMPND 6 PROTEIN; COMPND 7 EC: 2.7.13.3; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PBAD KEYWDS FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.LAFAYE,X.SHU,A.ROYANT REVDAT 5 10-JAN-24 5AJG 1 COMPND REMARK HETNAM LINK REVDAT 4 24-AUG-16 5AJG 1 JRNL REVDAT 3 17-AUG-16 5AJG 1 TITLE REVDAT 2 10-AUG-16 5AJG 1 JRNL REVDAT 1 09-MAR-16 5AJG 0 JRNL AUTH M.FELIKS,C.LAFAYE,X.SHU,A.ROYANT,M.FIELD JRNL TITL STRUCTURAL DETERMINANTS OF IMPROVED FLUORESCENCE IN A FAMILY JRNL TITL 2 OF BACTERIOPHYTOCHROME-BASED INFRARED FLUORESCENT PROTEINS: JRNL TITL 3 INSIGHTS FROM CONTINUUM ELECTROSTATIC CALCULATIONS AND JRNL TITL 4 MOLECULAR DYNAMICS SIMULATIONS. JRNL REF BIOCHEMISTRY V. 55 4263 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27471775 JRNL DOI 10.1021/ACS.BIOCHEM.6B00295 REMARK 2 REMARK 2 RESOLUTION. 1.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 121711 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6417 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.11 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.14 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8467 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 437 REMARK 3 BIN FREE R VALUE : 0.2450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2298 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 262 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18000 REMARK 3 B22 (A**2) : 0.13000 REMARK 3 B33 (A**2) : 0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.028 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.029 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.017 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.803 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.967 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2667 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2624 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3701 ; 1.944 ; 2.004 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6052 ; 0.950 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 367 ; 6.370 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;36.353 ;22.500 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 434 ;11.859 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;14.139 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 424 ; 0.143 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3091 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 621 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1296 ; 2.289 ; 1.520 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1295 ; 2.254 ; 1.517 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1640 ; 2.890 ; 2.285 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1371 ; 2.656 ; 1.749 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5291 ; 3.275 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 67 ;23.680 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5388 ;10.367 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. COVALENT BOND BETWEEN ATOM SG OF CYS A24 AND ATOM REMARK 3 CBA1 OF CHROMOPHORE LBV B1 REMARK 4 REMARK 4 5AJG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1290063070. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 121711 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.110 REMARK 200 RESOLUTION RANGE LOW (A) : 38.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03000 REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.62000 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4CQH REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG 400, 0.1 M SODIUM ACETATE PH REMARK 280 5.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.68050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.51400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.68050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.51400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2020 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ARG A 3 REMARK 465 ASP A 4 REMARK 465 PRO A 5 REMARK 465 PRO A 90 REMARK 465 PRO A 91 REMARK 465 GLY A 92 REMARK 465 CYS A 93 REMARK 465 PRO A 94 REMARK 465 ASP A 95 REMARK 465 ALA A 96 REMARK 465 GLU A 130 REMARK 465 ALA A 131 REMARK 465 TRP A 132 REMARK 465 ASP A 133 REMARK 465 SER A 134 REMARK 465 ILE A 135 REMARK 465 GLY A 136 REMARK 465 PRO A 137 REMARK 465 GLU A 322 REMARK 465 PHE A 323 REMARK 465 HIS A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 465 HIS A 329 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 100 CD NE CZ NH1 NH2 REMARK 470 HIS A 138 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 154 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 154 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 23 34.38 -150.89 REMARK 500 ALA A 119 -120.63 57.66 REMARK 500 GLU A 193 127.24 -39.36 REMARK 500 PRO A 294 153.39 -47.78 REMARK 500 TYR A 295 116.12 -165.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LBV A 1322 DBREF 5AJG A 1 321 UNP Q9RZA4 BPHY_DEIRA 1 321 SEQADV 5AJG ALA A 2 UNP Q9RZA4 SER 2 ENGINEERED MUTATION SEQADV 5AJG VAL A 54 UNP Q9RZA4 MET 54 ENGINEERED MUTATION SEQADV 5AJG ALA A 119 UNP Q9RZA4 GLY 119 ENGINEERED MUTATION SEQADV 5AJG ILE A 135 UNP Q9RZA4 THR 135 ENGINEERED MUTATION SEQADV 5AJG MET A 186 UNP Q9RZA4 VAL 186 ENGINEERED MUTATION SEQADV 5AJG MET A 195 UNP Q9RZA4 LEU 195 ENGINEERED MUTATION SEQADV 5AJG GLN A 196 UNP Q9RZA4 HIS 196 ENGINEERED MUTATION SEQADV 5AJG HIS A 207 UNP Q9RZA4 ASP 207 ENGINEERED MUTATION SEQADV 5AJG THR A 208 UNP Q9RZA4 ILE 208 ENGINEERED MUTATION SEQADV 5AJG VAL A 288 UNP Q9RZA4 ALA 288 ENGINEERED MUTATION SEQADV 5AJG LYS A 311 UNP Q9RZA4 LEU 311 ENGINEERED MUTATION SEQADV 5AJG GLY A 314 UNP Q9RZA4 LEU 314 ENGINEERED MUTATION SEQADV 5AJG ARG A 318 UNP Q9RZA4 VAL 318 ENGINEERED MUTATION SEQADV 5AJG GLU A 322 UNP Q9RZA4 EXPRESSION TAG SEQADV 5AJG PHE A 323 UNP Q9RZA4 EXPRESSION TAG SEQADV 5AJG HIS A 324 UNP Q9RZA4 EXPRESSION TAG SEQADV 5AJG HIS A 325 UNP Q9RZA4 EXPRESSION TAG SEQADV 5AJG HIS A 326 UNP Q9RZA4 EXPRESSION TAG SEQADV 5AJG HIS A 327 UNP Q9RZA4 EXPRESSION TAG SEQADV 5AJG HIS A 328 UNP Q9RZA4 EXPRESSION TAG SEQADV 5AJG HIS A 329 UNP Q9RZA4 EXPRESSION TAG SEQRES 1 A 329 MET ALA ARG ASP PRO LEU PRO PHE PHE PRO PRO LEU TYR SEQRES 2 A 329 LEU GLY GLY PRO GLU ILE THR THR GLU ASN CYS GLU ARG SEQRES 3 A 329 GLU PRO ILE HIS ILE PRO GLY SER ILE GLN PRO HIS GLY SEQRES 4 A 329 ALA LEU LEU THR ALA ASP GLY HIS SER GLY GLU VAL LEU SEQRES 5 A 329 GLN VAL SER LEU ASN ALA ALA THR PHE LEU GLY GLN GLU SEQRES 6 A 329 PRO THR VAL LEU ARG GLY GLN THR LEU ALA ALA LEU LEU SEQRES 7 A 329 PRO GLU GLN TRP PRO ALA LEU GLN ALA ALA LEU PRO PRO SEQRES 8 A 329 GLY CYS PRO ASP ALA LEU GLN TYR ARG ALA THR LEU ASP SEQRES 9 A 329 TRP PRO ALA ALA GLY HIS LEU SER LEU THR VAL HIS ARG SEQRES 10 A 329 VAL ALA GLU LEU LEU ILE LEU GLU PHE GLU PRO THR GLU SEQRES 11 A 329 ALA TRP ASP SER ILE GLY PRO HIS ALA LEU ARG ASN ALA SEQRES 12 A 329 MET PHE ALA LEU GLU SER ALA PRO ASN LEU ARG ALA LEU SEQRES 13 A 329 ALA GLU VAL ALA THR GLN THR VAL ARG GLU LEU THR GLY SEQRES 14 A 329 PHE ASP ARG VAL MET LEU TYR LYS PHE ALA PRO ASP ALA SEQRES 15 A 329 THR GLY GLU MET ILE ALA GLU ALA ARG ARG GLU GLY MET SEQRES 16 A 329 GLN ALA PHE LEU GLY HIS ARG PHE PRO ALA SER HIS THR SEQRES 17 A 329 PRO ALA GLN ALA ARG ALA LEU TYR THR ARG HIS LEU LEU SEQRES 18 A 329 ARG LEU THR ALA ASP THR ARG ALA ALA ALA VAL PRO LEU SEQRES 19 A 329 ASP PRO VAL LEU ASN PRO GLN THR ASN ALA PRO THR PRO SEQRES 20 A 329 LEU GLY GLY ALA VAL LEU ARG ALA THR SER PRO MET HIS SEQRES 21 A 329 MET GLN TYR LEU ARG ASN MET GLY VAL GLY SER SER LEU SEQRES 22 A 329 SER VAL SER VAL VAL VAL GLY GLY GLN LEU TRP GLY LEU SEQRES 23 A 329 ILE VAL CYS HIS HIS GLN THR PRO TYR VAL LEU PRO PRO SEQRES 24 A 329 ASP LEU ARG THR THR LEU GLU TYR LEU GLY ARG LYS LEU SEQRES 25 A 329 SER GLY GLN VAL GLN ARG LYS GLU ALA GLU PHE HIS HIS SEQRES 26 A 329 HIS HIS HIS HIS HET LBV A1322 43 HETNAM LBV 3-[2-[(Z)-[3-(2-CARBOXYETHYL)-5-[(Z)-(4-ETHENYL-3- HETNAM 2 LBV METHYL-5-OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-4- HETNAM 3 LBV METHYL-PYRROL-1-IUM -2-YLIDENE]METHYL]-5-[(Z)-[(3E)-3- HETNAM 4 LBV ETHYLIDENE-4-METHYL-5-OXIDANYLIDENE-PYRROLIDIN-2- HETNAM 5 LBV YLIDENE]METHYL]-4-METHYL-1H-PYRROL-3- YL]PROPANOIC HETNAM 6 LBV ACID HETSYN LBV 2(R),3(E)- PHYTOCHROMOBILIN FORMUL 2 LBV C33 H37 N4 O6 1+ FORMUL 3 HOH *262(H2 O) HELIX 1 1 PRO A 11 GLY A 15 5 5 HELIX 2 2 ASN A 23 GLU A 27 5 5 HELIX 3 3 ASN A 57 GLY A 63 1 7 HELIX 4 4 GLU A 65 ARG A 70 1 6 HELIX 5 5 THR A 73 LEU A 78 1 6 HELIX 6 6 GLU A 80 LEU A 89 1 10 HELIX 7 7 HIS A 138 ALA A 150 1 13 HELIX 8 8 ASN A 152 GLY A 169 1 18 HELIX 9 9 PRO A 204 THR A 208 5 5 HELIX 10 10 PRO A 209 HIS A 219 1 11 HELIX 11 11 SER A 257 MET A 267 1 11 HELIX 12 12 PRO A 298 ALA A 321 1 24 SHEET 1 AA 7 SER A 34 ILE A 35 0 SHEET 2 AA 7 VAL A 232 ASP A 235 -1 O VAL A 232 N ILE A 35 SHEET 3 AA 7 VAL A 51 SER A 55 -1 O VAL A 54 N ASP A 235 SHEET 4 AA 7 ALA A 40 ASP A 45 -1 O LEU A 41 N SER A 55 SHEET 5 AA 7 LEU A 121 THR A 129 -1 O LEU A 122 N ALA A 44 SHEET 6 AA 7 HIS A 110 VAL A 118 -1 O HIS A 110 N THR A 129 SHEET 7 AA 7 TYR A 99 LEU A 103 -1 O TYR A 99 N VAL A 115 SHEET 1 AB 6 ARG A 202 PHE A 203 0 SHEET 2 AB 6 GLY A 184 ARG A 191 -1 O GLY A 184 N PHE A 203 SHEET 3 AB 6 ARG A 172 PHE A 178 -1 O VAL A 173 N ALA A 190 SHEET 4 AB 6 GLN A 282 HIS A 291 -1 O TRP A 284 N PHE A 178 SHEET 5 AB 6 SER A 271 VAL A 279 -1 O SER A 271 N HIS A 291 SHEET 6 AB 6 LEU A 221 THR A 224 -1 O ARG A 222 N SER A 274 LINK SG CYS A 24 CBA LBV A1322 1555 1555 1.93 CISPEP 1 ASP A 235 PRO A 236 0 -4.56 SITE 1 AC1 28 THR A 20 CYS A 24 GLU A 27 TYR A 176 SITE 2 AC1 28 MET A 186 PHE A 203 SER A 206 HIS A 207 SITE 3 AC1 28 THR A 208 PRO A 209 TYR A 216 ARG A 254 SITE 4 AC1 28 THR A 256 SER A 257 MET A 259 HIS A 260 SITE 5 AC1 28 TYR A 263 MET A 267 SER A 272 SER A 274 SITE 6 AC1 28 HIS A 290 HOH A2192 HOH A2205 HOH A2236 SITE 7 AC1 28 HOH A2240 HOH A2245 HOH A2246 HOH A2263 CRYST1 95.361 53.028 66.219 90.00 90.90 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010486 0.000000 0.000165 0.00000 SCALE2 0.000000 0.018858 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015103 0.00000