HEADER HYDROLASE 03-MAR-15 5AKH TITLE LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL EPOXIDE HYDROLASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EPOXIDE HYDRATASE, SOLUBLE EPOXIDE HYDROLASE, SEH, SOLUBLE COMPND 5 EPOXIDE HYDROLASE; COMPND 6 EC: 3.3.2.10, 3.1.3.76; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.OSTER,S.TAPANI,Y.XUE,H.KACK REVDAT 4 10-JAN-24 5AKH 1 REMARK REVDAT 3 04-APR-18 5AKH 1 REMARK REVDAT 2 23-SEP-15 5AKH 1 JRNL REVDAT 1 13-MAY-15 5AKH 0 JRNL AUTH L.OSTER,S.TAPANI,Y.XUE,H.KACK JRNL TITL SUCCESSFUL GENERATION OF STRUCTURAL INFORMATION FOR JRNL TITL 2 FRAGMENT-BASED DRUG DISCOVERY. JRNL REF DRUG DISCOV TODAY V. 20 1104 2015 JRNL REFN ISSN 1359-6446 JRNL PMID 25931264 JRNL DOI 10.1016/J.DRUDIS.2015.04.005 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 36470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1865 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 18 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.16 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.80 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2886 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2148 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2730 REMARK 3 BIN R VALUE (WORKING SET) : 0.2106 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.41 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 156 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4323 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 458 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.15380 REMARK 3 B22 (A**2) : 0.15380 REMARK 3 B33 (A**2) : -0.30750 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.234 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.188 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.205 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.180 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4527 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6143 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1577 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 107 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 655 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4527 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 568 ; 5.000 ; SEMIHARMONI REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5531 ; 4.000 ; SEMIHARMONI REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.20 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.52 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.83 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY REMARK 4 REMARK 4 5AKH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1290063187. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU A200-CU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36496 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 243.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : 0.17000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 10.10 REMARK 200 R MERGE FOR SHELL (I) : 1.09000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 5AHX REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 162.53467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.26733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 121.90100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.63367 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 203.16833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 162.53467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 81.26733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 40.63367 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 121.90100 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 203.16833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 -46.44600 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 -80.44683 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 40.63367 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 OE2 GLU A 69 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 ASN A 548 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 322 NH2 ARG A 351 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD GLU A 69 OE2 GLU A 69 8435 1.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 13 -70.79 -122.79 REMARK 500 GLN A 204 -85.77 -107.11 REMARK 500 GLU A 269 -145.34 -114.19 REMARK 500 ASP A 335 -120.23 58.75 REMARK 500 ASN A 359 -46.01 71.69 REMARK 500 SER A 415 126.50 -37.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2073 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A2097 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH A2456 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A2457 DISTANCE = 6.20 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1548 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1549 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1551 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6NM A 1552 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AK3 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AK4 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AK5 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AK6 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AKE RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AKG RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AKI RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AKJ RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AKK RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AKL RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AKX RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AKY RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AKZ RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALD RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALE RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALF RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALG RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALH RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALI RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALJ RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALK RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALL RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALM RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALN RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALO RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALP RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALQ RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALR RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALS RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALT RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALU RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALV RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALW RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALX RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALY RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5ALZ RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AM0 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AM1 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AM2 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AM3 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AM4 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE REMARK 900 RELATED ID: 5AM5 RELATED DB: PDB REMARK 900 LIGAND COMPLEX STRUCTURE OF SOLUBLE EPOXIDE HYDROLASE DBREF 5AKH A 1 548 UNP P34913 HYES_HUMAN 1 548 SEQADV 5AKH GLY A 0 UNP P34913 EXPRESSION TAG SEQRES 1 A 549 GLY MET THR LEU ARG ALA ALA VAL PHE ASP LEU ASP GLY SEQRES 2 A 549 VAL LEU ALA LEU PRO ALA VAL PHE GLY VAL LEU GLY ARG SEQRES 3 A 549 THR GLU GLU ALA LEU ALA LEU PRO ARG GLY LEU LEU ASN SEQRES 4 A 549 ASP ALA PHE GLN LYS GLY GLY PRO GLU GLY ALA THR THR SEQRES 5 A 549 ARG LEU MET LYS GLY GLU ILE THR LEU SER GLN TRP ILE SEQRES 6 A 549 PRO LEU MET GLU GLU ASN CYS ARG LYS CYS SER GLU THR SEQRES 7 A 549 ALA LYS VAL CYS LEU PRO LYS ASN PHE SER ILE LYS GLU SEQRES 8 A 549 ILE PHE ASP LYS ALA ILE SER ALA ARG LYS ILE ASN ARG SEQRES 9 A 549 PRO MET LEU GLN ALA ALA LEU MET LEU ARG LYS LYS GLY SEQRES 10 A 549 PHE THR THR ALA ILE LEU THR ASN THR TRP LEU ASP ASP SEQRES 11 A 549 ARG ALA GLU ARG ASP GLY LEU ALA GLN LEU MET CYS GLU SEQRES 12 A 549 LEU LYS MET HIS PHE ASP PHE LEU ILE GLU SER CYS GLN SEQRES 13 A 549 VAL GLY MET VAL LYS PRO GLU PRO GLN ILE TYR LYS PHE SEQRES 14 A 549 LEU LEU ASP THR LEU LYS ALA SER PRO SER GLU VAL VAL SEQRES 15 A 549 PHE LEU ASP ASP ILE GLY ALA ASN LEU LYS PRO ALA ARG SEQRES 16 A 549 ASP LEU GLY MET VAL THR ILE LEU VAL GLN ASP THR ASP SEQRES 17 A 549 THR ALA LEU LYS GLU LEU GLU LYS VAL THR GLY ILE GLN SEQRES 18 A 549 LEU LEU ASN THR PRO ALA PRO LEU PRO THR SER CYS ASN SEQRES 19 A 549 PRO SER ASP MET SER HIS GLY TYR VAL THR VAL LYS PRO SEQRES 20 A 549 ARG VAL ARG LEU HIS PHE VAL GLU LEU GLY SER GLY PRO SEQRES 21 A 549 ALA VAL CYS LEU CYS HIS GLY PHE PRO GLU SER TRP TYR SEQRES 22 A 549 SER TRP ARG TYR GLN ILE PRO ALA LEU ALA GLN ALA GLY SEQRES 23 A 549 TYR ARG VAL LEU ALA MET ASP MET LYS GLY TYR GLY GLU SEQRES 24 A 549 SER SER ALA PRO PRO GLU ILE GLU GLU TYR CYS MET GLU SEQRES 25 A 549 VAL LEU CYS LYS GLU MET VAL THR PHE LEU ASP LYS LEU SEQRES 26 A 549 GLY LEU SER GLN ALA VAL PHE ILE GLY HIS ASP TRP GLY SEQRES 27 A 549 GLY MET LEU VAL TRP TYR MET ALA LEU PHE TYR PRO GLU SEQRES 28 A 549 ARG VAL ARG ALA VAL ALA SER LEU ASN THR PRO PHE ILE SEQRES 29 A 549 PRO ALA ASN PRO ASN MET SER PRO LEU GLU SER ILE LYS SEQRES 30 A 549 ALA ASN PRO VAL PHE ASP TYR GLN LEU TYR PHE GLN GLU SEQRES 31 A 549 PRO GLY VAL ALA GLU ALA GLU LEU GLU GLN ASN LEU SER SEQRES 32 A 549 ARG THR PHE LYS SER LEU PHE ARG ALA SER ASP GLU SER SEQRES 33 A 549 VAL LEU SER MET HIS LYS VAL CYS GLU ALA GLY GLY LEU SEQRES 34 A 549 PHE VAL ASN SER PRO GLU GLU PRO SER LEU SER ARG MET SEQRES 35 A 549 VAL THR GLU GLU GLU ILE GLN PHE TYR VAL GLN GLN PHE SEQRES 36 A 549 LYS LYS SER GLY PHE ARG GLY PRO LEU ASN TRP TYR ARG SEQRES 37 A 549 ASN MET GLU ARG ASN TRP LYS TRP ALA CYS LYS SER LEU SEQRES 38 A 549 GLY ARG LYS ILE LEU ILE PRO ALA LEU MET VAL THR ALA SEQRES 39 A 549 GLU LYS ASP PHE VAL LEU VAL PRO GLN MET SER GLN HIS SEQRES 40 A 549 MET GLU ASP TRP ILE PRO HIS LEU LYS ARG GLY HIS ILE SEQRES 41 A 549 GLU ASP CYS GLY HIS TRP THR GLN MET ASP LYS PRO THR SEQRES 42 A 549 GLU VAL ASN GLN ILE LEU ILE LYS TRP LEU ASP SER ASP SEQRES 43 A 549 ALA ARG ASN HET SO4 A1548 5 HET SO4 A1549 5 HET DMS A1550 4 HET DMS A1551 4 HET 6NM A1552 21 HETNAM SO4 SULFATE ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM 6NM 4-[5-[3-(TRIFLUOROMETHYL)PHENYL]-1H-PYRAZOL-4- HETNAM 2 6NM YL]PYRIDINE FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 DMS 2(C2 H6 O S) FORMUL 6 6NM C15 H10 F3 N3 FORMUL 7 HOH *458(H2 O) HELIX 1 1 PHE A 20 LEU A 30 1 11 HELIX 2 2 GLY A 35 LYS A 43 1 9 HELIX 3 3 GLY A 44 GLU A 47 5 4 HELIX 4 4 GLY A 48 LYS A 55 1 8 HELIX 5 5 THR A 59 LYS A 79 1 21 HELIX 6 6 SER A 87 ARG A 99 1 13 HELIX 7 7 ASN A 102 LYS A 115 1 14 HELIX 8 8 ARG A 133 MET A 145 1 13 HELIX 9 9 SER A 153 GLY A 157 1 5 HELIX 10 10 GLU A 162 LYS A 174 1 13 HELIX 11 11 SER A 176 SER A 178 5 3 HELIX 12 12 ILE A 186 LEU A 196 1 11 HELIX 13 13 ASP A 205 GLY A 218 1 14 HELIX 14 14 ASN A 233 MET A 237 5 5 HELIX 15 15 SER A 270 ARG A 275 5 6 HELIX 16 16 GLN A 277 ALA A 284 1 8 HELIX 17 17 GLU A 304 TYR A 308 5 5 HELIX 18 18 CYS A 309 LEU A 324 1 16 HELIX 19 19 ASP A 335 TYR A 348 1 14 HELIX 20 20 SER A 370 ALA A 377 1 8 HELIX 21 21 ASN A 378 VAL A 380 5 3 HELIX 22 22 PHE A 381 PHE A 387 1 7 HELIX 23 23 GLY A 391 ASN A 400 1 10 HELIX 24 24 ASN A 400 PHE A 409 1 10 HELIX 25 25 LYS A 421 GLY A 426 1 6 HELIX 26 26 THR A 443 LYS A 455 1 13 HELIX 27 27 PHE A 459 TRP A 465 1 7 HELIX 28 28 ASN A 468 LYS A 478 1 11 HELIX 29 29 VAL A 500 GLN A 505 5 6 HELIX 30 30 HIS A 506 TRP A 510 5 5 HELIX 31 31 TRP A 525 LYS A 530 1 6 HELIX 32 32 LYS A 530 ALA A 546 1 17 SHEET 1 AA 5 PHE A 149 GLU A 152 0 SHEET 2 AA 5 THR A 118 THR A 123 1 O THR A 119 N PHE A 149 SHEET 3 AA 5 ALA A 5 PHE A 8 1 O ALA A 6 N ALA A 120 SHEET 4 AA 5 VAL A 180 ASP A 184 1 O VAL A 181 N VAL A 7 SHEET 5 AA 5 VAL A 199 LEU A 202 1 O VAL A 199 N PHE A 182 SHEET 1 AB 2 ALA A 15 LEU A 16 0 SHEET 2 AB 2 LYS A 100 ILE A 101 -1 O LYS A 100 N LEU A 16 SHEET 1 AC 8 SER A 238 LYS A 245 0 SHEET 2 AC 8 VAL A 248 LEU A 255 -1 O VAL A 248 N VAL A 244 SHEET 3 AC 8 ARG A 287 ASP A 292 -1 O VAL A 288 N LEU A 255 SHEET 4 AC 8 ALA A 260 CYS A 264 1 O VAL A 261 N LEU A 289 SHEET 5 AC 8 ALA A 329 HIS A 334 1 O VAL A 330 N CYS A 262 SHEET 6 AC 8 VAL A 352 LEU A 358 1 N ARG A 353 O ALA A 329 SHEET 7 AC 8 ALA A 488 ALA A 493 1 O LEU A 489 N SER A 357 SHEET 8 AC 8 LYS A 515 ILE A 519 1 O LYS A 515 N MET A 490 CISPEP 1 LEU A 16 PRO A 17 0 -5.19 CISPEP 2 LYS A 160 PRO A 161 0 9.41 CISPEP 3 PHE A 267 PRO A 268 0 -9.39 SITE 1 AC1 3 ASP A 335 TRP A 336 MET A 339 SITE 1 AC2 8 LEU A 228 TYR A 276 ARG A 440 MET A 441 SITE 2 AC2 8 VAL A 442 THR A 443 HOH A2260 HOH A2261 SITE 1 AC3 4 LYS A 144 PHE A 147 PHE A 149 LEU A 150 SITE 1 AC4 5 LEU A 3 ARG A 4 LYS A 115 GLY A 116 SITE 2 AC4 5 PHE A 117 SITE 1 AC5 12 PHE A 267 TYR A 383 PHE A 387 LEU A 408 SITE 2 AC5 12 MET A 419 LEU A 428 ASP A 496 VAL A 498 SITE 3 AC5 12 HIS A 524 TRP A 525 HOH A2299 HOH A2348 CRYST1 92.892 92.892 243.802 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010765 0.006215 0.000000 0.00000 SCALE2 0.000000 0.012431 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004102 0.00000