HEADER TRANSFERASE 11-MAR-15 5AMN TITLE THE DISCOVERY OF 2-SUBSTITUTED PHENOL QUINAZOLINES AS POTENT AND TITLE 2 SELECTIVE RET KINASE INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 705-826,841-1012; COMPND 5 SYNONYM: CADHERIN FAMILY MEMBER 12, PROTO-ONCOGENE C-RET; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: PHOSPHORYLATION AT Y900 AND Y905 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS TRANSFERASE, RET, ONCOGENE, RECEPTOR TYROSINE KINASE, CHEMICAL KEYWDS 2 INHIBITOR, CANCER EXPDTA X-RAY DIFFRACTION AUTHOR R.NEWTON,K.BOWLER,E.M.BURNS,P.CHAPMAN,E.FAIRWEATHER,S.FRITZL, AUTHOR 2 K.GOLDBERG,N.M.HAMILTON,S.V.HOLT,G.V.HOPKINS,S.D.JONES,A.M.JORDAN, AUTHOR 3 A.LYONS,N.Q.MCDONALD,L.A.MAGUIRE,D.P.MOULD,A.G.PURKISS,H.F.SMALL, AUTHOR 4 A.STOWELL,G.J.THOMSON,I.D.WADDELL,B.WASZKOWYCZ,A.J.WATSON, AUTHOR 5 D.J.OGILVIE REVDAT 4 10-JAN-24 5AMN 1 REMARK LINK REVDAT 3 28-FEB-18 5AMN 1 JRNL REVDAT 2 02-MAR-16 5AMN 1 JRNL REVDAT 1 17-FEB-16 5AMN 0 JRNL AUTH R.NEWTON,K.A.BOWLER,E.M.BURNS,P.J.CHAPMAN,E.E.FAIRWEATHER, JRNL AUTH 2 S.J.R.FRITZL,K.M.GOLDBERG,N.M.HAMILTON,S.V.HOLT,G.V.HOPKINS, JRNL AUTH 3 S.D.JONES,A.M.JORDAN,A.J.LYONS,H.NIKKI MARCH,N.Q.MCDONALD, JRNL AUTH 4 L.A.MAGUIRE,D.P.MOULD,A.G.PURKISS,H.F.SMALL,A.I.J.STOWELL, JRNL AUTH 5 G.J.THOMSON,I.D.WADDELL,B.WASZKOWYCZ,A.J.WATSON,D.J.OGILVIE JRNL TITL THE DISCOVERY OF 2-SUBSTITUTED PHENOL QUINAZOLINES AS POTENT JRNL TITL 2 RET KINASE INHIBITORS WITH IMPROVED KDR SELECTIVITY. JRNL REF EUR J MED CHEM V. 112 20 2016 JRNL REFN ISSN 1768-3254 JRNL PMID 26874741 JRNL DOI 10.1016/J.EJMECH.2016.01.039 REMARK 2 REMARK 2 RESOLUTION. 2.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 10852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 551 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 60.7269 - 4.0793 1.00 2751 151 0.1677 0.1982 REMARK 3 2 4.0793 - 3.2379 1.00 2563 118 0.1704 0.2169 REMARK 3 3 3.2379 - 2.8286 1.00 2496 152 0.2113 0.2973 REMARK 3 4 2.8286 - 2.5700 1.00 2491 130 0.2225 0.3185 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2308 REMARK 3 ANGLE : 0.621 3119 REMARK 3 CHIRALITY : 0.025 342 REMARK 3 PLANARITY : 0.002 390 REMARK 3 DIHEDRAL : 12.878 859 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 700 THROUGH 710) REMARK 3 ORIGIN FOR THE GROUP (A): 54.8606 -21.5725 -3.9999 REMARK 3 T TENSOR REMARK 3 T11: 0.4366 T22: 0.3900 REMARK 3 T33: 0.3321 T12: 0.0671 REMARK 3 T13: -0.0217 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 6.2400 L22: 7.8593 REMARK 3 L33: 2.5756 L12: 5.6644 REMARK 3 L13: 2.5482 L23: 4.3554 REMARK 3 S TENSOR REMARK 3 S11: 0.1989 S12: 0.7414 S13: 1.2697 REMARK 3 S21: -0.5955 S22: -0.8246 S23: 0.8231 REMARK 3 S31: -0.8957 S32: -0.9015 S33: 0.6306 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 714 THROUGH 819) REMARK 3 ORIGIN FOR THE GROUP (A): 67.4777 -9.9551 6.9729 REMARK 3 T TENSOR REMARK 3 T11: 0.2148 T22: 0.2225 REMARK 3 T33: 0.3035 T12: 0.0310 REMARK 3 T13: 0.0323 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.5821 L22: 3.8175 REMARK 3 L33: 2.1703 L12: 0.7874 REMARK 3 L13: 0.3066 L23: 0.5636 REMARK 3 S TENSOR REMARK 3 S11: -0.0552 S12: 0.0634 S13: -0.0188 REMARK 3 S21: -0.0276 S22: 0.0117 S23: 0.1845 REMARK 3 S31: -0.0558 S32: -0.0364 S33: 0.0480 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 846 THROUGH 1009 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.9033 -28.5118 20.5889 REMARK 3 T TENSOR REMARK 3 T11: 0.2513 T22: 0.2266 REMARK 3 T33: 0.2103 T12: -0.0218 REMARK 3 T13: -0.0012 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 1.9141 L22: 4.1403 REMARK 3 L33: 2.0075 L12: -0.6544 REMARK 3 L13: 0.1291 L23: 0.3679 REMARK 3 S TENSOR REMARK 3 S11: -0.0586 S12: -0.1379 S13: -0.0659 REMARK 3 S21: 0.3148 S22: -0.0079 S23: -0.0433 REMARK 3 S31: 0.1007 S32: -0.0337 S33: 0.0606 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5AMN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1290063177. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97630 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SILICON REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10852 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.570 REMARK 200 RESOLUTION RANGE LOW (A) : 60.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.20000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.50 REMARK 200 R MERGE FOR SHELL (I) : 0.90000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3TXO REMARK 200 REMARK 200 REMARK: MOLECULAR REPLACEMENT USED N- AND C-LOBES SEPARATELY. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.4M SODIUM FORMATE 0.1M SODIUM REMARK 280 ACETATE PH 4.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 121.42000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 25.28500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 25.28500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 182.13000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 25.28500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 25.28500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.71000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 25.28500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 25.28500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 182.13000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 25.28500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 25.28500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 60.71000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 121.42000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 101.14000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -101.14000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 712 REMARK 465 GLU A 713 REMARK 465 GLY A 823 REMARK 465 PRO A 824 REMARK 465 GLY A 825 REMARK 465 TYR A 826 REMARK 465 PRO A 841 REMARK 465 ASP A 842 REMARK 465 LYS A 1011 REMARK 465 ARG A 1012 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 710 CG CD CE NZ REMARK 470 ILE A 711 CG1 CG2 CD1 REMARK 470 ASP A 714 CG OD1 OD2 REMARK 470 LYS A 716 NZ REMARK 470 LYS A 722 CG CD CE NZ REMARK 470 LYS A 747 CG CD CE NZ REMARK 470 GLU A 762 CG CD OE1 OE2 REMARK 470 LYS A 780 CD CE NZ REMARK 470 ASN A 783 CG OD1 ND2 REMARK 470 LYS A 789 CD CE NZ REMARK 470 GLN A 796 CG CD OE1 NE2 REMARK 470 GLU A 818 CD OE1 OE2 REMARK 470 SER A 819 OG REMARK 470 LYS A 821 CG CD CE NZ REMARK 470 VAL A 822 CG1 REMARK 470 GLU A 843 CG CD OE1 OE2 REMARK 470 ARG A 844 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 867 CG CD OE1 OE2 REMARK 470 GLU A 884 CD OE1 OE2 REMARK 470 LYS A 887 CE NZ REMARK 470 GLU A 901 CG CD OE1 OE2 REMARK 470 GLU A 902 CG CD OE1 OE2 REMARK 470 LYS A 965 CE NZ REMARK 470 ASP A 974 CG OD1 OD2 REMARK 470 GLU A 978 CG CD OE1 OE2 REMARK 470 GLU A 979 CG CD OE1 OE2 REMARK 470 ARG A 982 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 986 OE1 NE2 REMARK 470 LYS A 989 CE NZ REMARK 470 GLU A 991 CG CD OE1 OE2 REMARK 470 LYS A 994 CD CE NZ REMARK 470 LYS A1003 CG CD CE NZ REMARK 470 LYS A1007 CG CD CE NZ REMARK 470 VAL A1010 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 805 O HOH A 3019 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 820 51.84 -101.41 REMARK 500 ARG A 873 -6.64 77.05 REMARK 500 ASP A 874 43.78 -143.60 REMARK 500 ASP A 892 78.55 56.50 REMARK 500 ASN A 975 63.16 -108.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 PHOSPHOTYROSINE (PTR): PHOSPHORYLATION OF TYROSINE RESIDUES REMARK 600 FORMIC ACID (FMT): PRESENT AS FORMATE. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2012 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2013 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2014 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2015 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2016 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2017 REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 827-840 HAVE BEEN DELETED FROM THE CONSTRUCT DBREF 5AMN A 705 826 UNP P07949 RET_HUMAN 705 826 DBREF 5AMN A 841 1012 UNP P07949 RET_HUMAN 841 1012 SEQADV 5AMN GLY A 700 UNP P07949 EXPRESSION TAG SEQADV 5AMN PRO A 701 UNP P07949 EXPRESSION TAG SEQADV 5AMN LEU A 702 UNP P07949 EXPRESSION TAG SEQADV 5AMN SER A 703 UNP P07949 EXPRESSION TAG SEQADV 5AMN LEU A 704 UNP P07949 EXPRESSION TAG SEQRES 1 A 299 GLY PRO LEU SER LEU SER VAL ASP ALA PHE LYS ILE LEU SEQRES 2 A 299 GLU ASP PRO LYS TRP GLU PHE PRO ARG LYS ASN LEU VAL SEQRES 3 A 299 LEU GLY LYS THR LEU GLY GLU GLY GLU PHE GLY LYS VAL SEQRES 4 A 299 VAL LYS ALA THR ALA PHE HIS LEU LYS GLY ARG ALA GLY SEQRES 5 A 299 TYR THR THR VAL ALA VAL LYS MET LEU LYS GLU ASN ALA SEQRES 6 A 299 SER PRO SER GLU LEU ARG ASP LEU LEU SER GLU PHE ASN SEQRES 7 A 299 VAL LEU LYS GLN VAL ASN HIS PRO HIS VAL ILE LYS LEU SEQRES 8 A 299 TYR GLY ALA CYS SER GLN ASP GLY PRO LEU LEU LEU ILE SEQRES 9 A 299 VAL GLU TYR ALA LYS TYR GLY SER LEU ARG GLY PHE LEU SEQRES 10 A 299 ARG GLU SER ARG LYS VAL GLY PRO GLY TYR PRO ASP GLU SEQRES 11 A 299 ARG ALA LEU THR MET GLY ASP LEU ILE SER PHE ALA TRP SEQRES 12 A 299 GLN ILE SER GLN GLY MET GLN TYR LEU ALA GLU MET LYS SEQRES 13 A 299 LEU VAL HIS ARG ASP LEU ALA ALA ARG ASN ILE LEU VAL SEQRES 14 A 299 ALA GLU GLY ARG LYS MET LYS ILE SER ASP PHE GLY LEU SEQRES 15 A 299 SER ARG ASP VAL PTR GLU GLU ASP SER PTR VAL LYS ARG SEQRES 16 A 299 SER GLN GLY ARG ILE PRO VAL LYS TRP MET ALA ILE GLU SEQRES 17 A 299 SER LEU PHE ASP HIS ILE TYR THR THR GLN SER ASP VAL SEQRES 18 A 299 TRP SER PHE GLY VAL LEU LEU TRP GLU ILE VAL THR LEU SEQRES 19 A 299 GLY GLY ASN PRO TYR PRO GLY ILE PRO PRO GLU ARG LEU SEQRES 20 A 299 PHE ASN LEU LEU LYS THR GLY HIS ARG MET GLU ARG PRO SEQRES 21 A 299 ASP ASN CYS SER GLU GLU MET TYR ARG LEU MET LEU GLN SEQRES 22 A 299 CYS TRP LYS GLN GLU PRO ASP LYS ARG PRO VAL PHE ALA SEQRES 23 A 299 ASP ILE SER LYS ASP LEU GLU LYS MET MET VAL LYS ARG MODRES 5AMN PTR A 900 TYR O-PHOSPHOTYROSINE MODRES 5AMN PTR A 905 TYR O-PHOSPHOTYROSINE HET PTR A 900 16 HET PTR A 905 16 HET DTQ A2018 37 HET FMT A2011 5 HET FMT A2012 5 HET FMT A2013 5 HET FMT A2014 5 HET FMT A2015 5 HET FMT A2016 5 HET FMT A2017 5 HETNAM PTR O-PHOSPHOTYROSINE HETNAM DTQ 4-[3-HYDROXYANILINO]-6,7-DIMETHOXYQUINAZOLINE HETNAM FMT FORMIC ACID HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 PTR 2(C9 H12 N O6 P) FORMUL 2 DTQ C16 H15 N3 O3 FORMUL 3 FMT 7(C H2 O2) FORMUL 10 HOH *48(H2 O) HELIX 1 1 GLY A 700 ILE A 711 1 12 HELIX 2 2 ASP A 714 TRP A 717 5 4 HELIX 3 3 PRO A 720 LYS A 722 5 3 HELIX 4 4 SER A 765 LYS A 780 1 16 HELIX 5 5 SER A 811 SER A 819 1 9 HELIX 6 6 THR A 847 GLU A 867 1 21 HELIX 7 7 ALA A 876 ARG A 878 5 3 HELIX 8 8 PRO A 914 MET A 918 5 5 HELIX 9 9 ALA A 919 HIS A 926 1 8 HELIX 10 10 THR A 929 THR A 946 1 18 HELIX 11 11 PRO A 956 GLU A 958 5 3 HELIX 12 12 ARG A 959 THR A 966 1 8 HELIX 13 13 SER A 977 TRP A 988 1 12 HELIX 14 14 GLU A 991 ARG A 995 5 5 HELIX 15 15 VAL A 997 MET A 1009 1 13 SHEET 1 AA 5 LEU A 724 GLU A 732 0 SHEET 2 AA 5 GLY A 736 PHE A 744 -1 O VAL A 738 N LEU A 730 SHEET 3 AA 5 TYR A 752 LEU A 760 -1 O THR A 753 N ALA A 743 SHEET 4 AA 5 LEU A 801 GLU A 805 -1 O LEU A 802 N LYS A 758 SHEET 5 AA 5 LEU A 790 CYS A 794 -1 N TYR A 791 O ILE A 803 SHEET 1 AB 2 LEU A 870 VAL A 871 0 SHEET 2 AB 2 ARG A 897 ASP A 898 -1 O ARG A 897 N VAL A 871 SHEET 1 AC 2 ILE A 880 ALA A 883 0 SHEET 2 AC 2 LYS A 887 ILE A 890 -1 O LYS A 887 N ALA A 883 SHEET 1 AD 2 PTR A 905 VAL A 906 0 SHEET 2 AD 2 ILE A 927 TYR A 928 -1 O TYR A 928 N PTR A 905 LINK C VAL A 899 N PTR A 900 1555 1555 1.33 LINK C PTR A 900 N GLU A 901 1555 1555 1.33 LINK C SER A 904 N PTR A 905 1555 1555 1.33 LINK C PTR A 905 N VAL A 906 1555 1555 1.33 SITE 1 AC1 8 GLY A 700 PRO A 701 LEU A 702 SER A 703 SITE 2 AC1 8 GLN A 910 LEU A 923 PHE A 924 HIS A 926 SITE 1 AC2 5 ARG A 873 LEU A 895 LYS A 907 GLY A 911 SITE 2 AC2 5 ARG A 912 SITE 1 AC3 4 ASP A 707 LYS A 728 LYS A 740 TYR A 806 SITE 1 AC4 1 HOH A3039 SITE 1 AC5 4 ALA A 866 VAL A 997 PHE A 998 ALA A 999 SITE 1 AC6 1 LYS A 747 SITE 1 AC7 3 THR A 754 PHE A 924 HOH A3009 CRYST1 50.570 50.570 242.840 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019775 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019775 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004118 0.00000