HEADER DNA BINDING PROTEIN 04-SEP-15 5AN6 TITLE CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA CSM2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRISPR-ASSOCIATED PROTEIN, CSM2 FAMILY; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 6-128; COMPND 5 SYNONYM: CSM2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 ATCC: 43589; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PQTEV; SOURCE 11 OTHER_DETAILS: GERMAN COLLECTION OF MICROORGANISMS (DSM) KEYWDS DNA BINDING PROTEIN, CRISPR-CAS, CD-SAD EXPDTA X-RAY DIFFRACTION AUTHOR G.GALLO,G.AUGUSTO,G.RANGEL,A.ZELANIS,M.A.MORI,C.B.CAMPOS,M.WURTELE REVDAT 3 08-MAY-24 5AN6 1 REMARK LINK REVDAT 2 02-MAR-16 5AN6 1 JRNL REVDAT 1 23-DEC-15 5AN6 0 JRNL AUTH G.GALLO,G.AUGUSTO,G.RANGEL,A.ZELANIS,M.A.MORI,C.B.CAMPOS, JRNL AUTH 2 M.WURTELE JRNL TITL STRUCTURAL BASIS FOR DIMER FORMATION OF THE JRNL TITL 2 CRISPR-ASSOCIATED PROTEIN CSM2 OF THERMOTOGA MARITIMA. JRNL REF FEBS J. V. 283 694 2016 JRNL REFN ISSN 1742-464X JRNL PMID 26663887 JRNL DOI 10.1111/FEBS.13621 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 21679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1119 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.6568 - 4.8044 0.99 2734 165 0.2120 0.2392 REMARK 3 2 4.8044 - 3.8143 1.00 2616 174 0.1808 0.2124 REMARK 3 3 3.8143 - 3.3324 0.99 2603 137 0.1988 0.2612 REMARK 3 4 3.3324 - 3.0278 0.99 2598 131 0.2350 0.2589 REMARK 3 5 3.0278 - 2.8108 0.99 2553 131 0.2348 0.2764 REMARK 3 6 2.8108 - 2.6451 0.98 2543 119 0.2253 0.3121 REMARK 3 7 2.6451 - 2.5127 0.98 2529 136 0.2221 0.2946 REMARK 3 8 2.5127 - 2.4033 0.93 2384 126 0.2352 0.2882 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3198 REMARK 3 ANGLE : 1.111 4275 REMARK 3 CHIRALITY : 0.042 444 REMARK 3 PLANARITY : 0.005 540 REMARK 3 DIHEDRAL : 16.690 1245 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5AN6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1290064881. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.458 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21688 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 12.630 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.240 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.03 REMARK 200 R MERGE FOR SHELL (I) : 0.84000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.640 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE PH 4.6 100MM REMARK 280 CADMIUM CHLORIDE 21% PEG400 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.33333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 106.66667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 106.66667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 53.33333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 160.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2035 O HOH A 2036 2.12 REMARK 500 O ASN A 34 O HOH A 2005 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 33 118.01 -33.77 REMARK 500 GLU A 67 -66.13 -106.25 REMARK 500 LEU B 36 47.30 -97.72 REMARK 500 LYS B 53 40.20 -109.12 REMARK 500 ILE B 68 -62.44 -100.94 REMARK 500 LYS C 30 -54.10 -120.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C2032 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH C2033 DISTANCE = 6.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B1133 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 12 OD2 REMARK 620 2 ASP A 12 OD1 45.5 REMARK 620 3 HOH B2002 O 131.6 92.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B1132 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 88 OE1 REMARK 620 2 GLU A 88 OE2 51.5 REMARK 620 3 HOH A2004 O 120.0 71.2 REMARK 620 4 GLU B 95 OE1 81.6 96.7 89.7 REMARK 620 5 GLU B 95 OE2 92.2 135.2 122.9 46.8 REMARK 620 6 HOH B2027 O 107.3 108.0 105.6 154.0 107.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD C1130 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 95 OE1 REMARK 620 2 GLU A 95 OE2 45.2 REMARK 620 3 HOH A2027 O 154.4 111.2 REMARK 620 4 HOH B2008 O 86.7 120.2 103.1 REMARK 620 5 GLU C 88 OE2 66.5 101.5 137.8 81.5 REMARK 620 6 GLU C 88 OE1 88.9 91.8 103.5 126.1 48.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B1129 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 88 OE1 REMARK 620 2 GLU B 88 OE2 51.1 REMARK 620 3 HOH B2040 O 118.0 99.5 REMARK 620 4 GLU C 95 OE1 77.7 71.0 151.5 REMARK 620 5 GLU C 95 OE2 117.9 79.7 103.7 48.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B1130 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2036 O REMARK 620 2 HOH B2041 O 156.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B1131 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2009 O REMARK 620 2 HOH B2042 O 78.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD C1129 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 59 OD1 REMARK 620 2 HOH C2019 O 81.0 REMARK 620 3 HOH C2031 O 161.9 107.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 1129 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 1130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 1131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 1132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 1133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD C 1129 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD C 1130 DBREF 5AN6 A 6 128 UNP Q9X2D0 Q9X2D0_THEMA 6 128 DBREF 5AN6 B 6 128 UNP Q9X2D0 Q9X2D0_THEMA 6 128 DBREF 5AN6 C 6 128 UNP Q9X2D0 Q9X2D0_THEMA 6 128 SEQRES 1 A 123 GLY VAL SER LEU LYS GLU ASP LEU LYS ASP LEU VAL ARG SEQRES 2 A 123 LYS ALA GLU GLU ILE GLY ARG GLU LEU SER GLY LYS LEU SEQRES 3 A 123 LYS THR ASN GLN LEU ARG LYS PHE HIS GLY HIS LEU THR SEQRES 4 A 123 LYS ILE TRP SER ASN TYR ILE TYR LYS LYS LYS ASP TYR SEQRES 5 A 123 ARG ASP ASN PRO GLU LYS PHE ASN GLU GLU ILE LEU ASN SEQRES 6 A 123 GLU LEU HIS PHE MET LYS ILE PHE LEU ALA TYR GLN VAL SEQRES 7 A 123 GLY ARG ASP ILE GLU GLY ILE SER GLU LEU LYS GLU ILE SEQRES 8 A 123 LEU GLU PRO LEU ILE ASP GLU ILE LYS THR PRO ASP GLU SEQRES 9 A 123 PHE GLU LYS PHE LYS LYS PHE TYR ASP ALA ILE LEU ALA SEQRES 10 A 123 TYR HIS LYS PHE HIS SER SEQRES 1 B 123 GLY VAL SER LEU LYS GLU ASP LEU LYS ASP LEU VAL ARG SEQRES 2 B 123 LYS ALA GLU GLU ILE GLY ARG GLU LEU SER GLY LYS LEU SEQRES 3 B 123 LYS THR ASN GLN LEU ARG LYS PHE HIS GLY HIS LEU THR SEQRES 4 B 123 LYS ILE TRP SER ASN TYR ILE TYR LYS LYS LYS ASP TYR SEQRES 5 B 123 ARG ASP ASN PRO GLU LYS PHE ASN GLU GLU ILE LEU ASN SEQRES 6 B 123 GLU LEU HIS PHE MET LYS ILE PHE LEU ALA TYR GLN VAL SEQRES 7 B 123 GLY ARG ASP ILE GLU GLY ILE SER GLU LEU LYS GLU ILE SEQRES 8 B 123 LEU GLU PRO LEU ILE ASP GLU ILE LYS THR PRO ASP GLU SEQRES 9 B 123 PHE GLU LYS PHE LYS LYS PHE TYR ASP ALA ILE LEU ALA SEQRES 10 B 123 TYR HIS LYS PHE HIS SER SEQRES 1 C 123 GLY VAL SER LEU LYS GLU ASP LEU LYS ASP LEU VAL ARG SEQRES 2 C 123 LYS ALA GLU GLU ILE GLY ARG GLU LEU SER GLY LYS LEU SEQRES 3 C 123 LYS THR ASN GLN LEU ARG LYS PHE HIS GLY HIS LEU THR SEQRES 4 C 123 LYS ILE TRP SER ASN TYR ILE TYR LYS LYS LYS ASP TYR SEQRES 5 C 123 ARG ASP ASN PRO GLU LYS PHE ASN GLU GLU ILE LEU ASN SEQRES 6 C 123 GLU LEU HIS PHE MET LYS ILE PHE LEU ALA TYR GLN VAL SEQRES 7 C 123 GLY ARG ASP ILE GLU GLY ILE SER GLU LEU LYS GLU ILE SEQRES 8 C 123 LEU GLU PRO LEU ILE ASP GLU ILE LYS THR PRO ASP GLU SEQRES 9 C 123 PHE GLU LYS PHE LYS LYS PHE TYR ASP ALA ILE LEU ALA SEQRES 10 C 123 TYR HIS LYS PHE HIS SER HET CD B1129 1 HET CD B1130 1 HET CD B1131 1 HET CD B1132 1 HET CD B1133 1 HET CD C1129 1 HET CD C1130 1 HETNAM CD CADMIUM ION FORMUL 4 CD 7(CD 2+) FORMUL 11 HOH *111(H2 O) HELIX 1 1 ASP A 12 LEU A 31 1 20 HELIX 2 2 LEU A 36 LYS A 53 1 18 HELIX 3 3 LYS A 53 ASN A 60 1 8 HELIX 4 4 ASN A 60 ILE A 104 1 45 HELIX 5 5 THR A 106 PHE A 126 1 21 HELIX 6 6 ASP B 12 GLY B 29 1 18 HELIX 7 7 LEU B 36 LYS B 53 1 18 HELIX 8 8 LYS B 53 ARG B 58 1 6 HELIX 9 9 ASN B 60 ILE B 68 1 9 HELIX 10 10 ILE B 68 ASP B 102 1 35 HELIX 11 11 THR B 106 HIS B 127 1 22 HELIX 12 12 ASP C 12 GLY C 29 1 18 HELIX 13 13 LEU C 36 LYS C 53 1 18 HELIX 14 14 LYS C 53 ASN C 60 1 8 HELIX 15 15 ASN C 60 ILE C 68 1 9 HELIX 16 16 ILE C 68 ILE C 104 1 37 HELIX 17 17 THR C 106 PHE C 126 1 21 LINK OD2 ASP A 12 CD CD B1133 4656 1555 2.77 LINK OD1 ASP A 12 CD CD B1133 4656 1555 2.91 LINK OE1 GLU A 88 CD CD B1132 1555 1555 2.59 LINK OE2 GLU A 88 CD CD B1132 1555 1555 2.53 LINK OE1 GLU A 95 CD CD C1130 4556 1555 3.02 LINK OE2 GLU A 95 CD CD C1130 4556 1555 2.61 LINK O HOH A2004 CD CD B1132 4556 1555 2.52 LINK O HOH A2027 CD CD C1130 4556 1555 2.94 LINK OE1 GLU B 88 CD CD B1129 1555 1555 2.56 LINK OE2 GLU B 88 CD CD B1129 1555 1555 2.65 LINK OE1 GLU B 95 CD CD B1132 1555 1555 2.93 LINK OE2 GLU B 95 CD CD B1132 1555 1555 2.49 LINK CD CD B1129 O HOH B2040 1555 1555 2.62 LINK CD CD B1129 OE1 GLU C 95 1555 4556 2.67 LINK CD CD B1129 OE2 GLU C 95 1555 4556 2.60 LINK CD CD B1130 O HOH B2036 1555 1555 2.71 LINK CD CD B1130 O HOH B2041 1555 1555 2.67 LINK CD CD B1131 O HOH B2009 1555 1555 3.18 LINK CD CD B1131 O HOH B2042 1555 1555 2.93 LINK CD CD B1132 O HOH B2027 1555 1555 2.75 LINK CD CD B1133 O HOH B2002 1555 1555 2.88 LINK O HOH B2008 CD CD C1130 1555 1555 2.68 LINK OD1 ASP C 59 CD CD C1129 1555 1555 2.64 LINK OE2 GLU C 88 CD CD C1130 1555 1555 2.76 LINK OE1 GLU C 88 CD CD C1130 1555 1555 2.64 LINK CD CD C1129 O HOH C2019 1555 1555 2.81 LINK CD CD C1129 O HOH C2031 1555 1555 3.23 SITE 1 AC1 3 GLU B 88 HOH B2040 GLU C 95 SITE 1 AC2 4 LEU B 121 HOH B2036 HOH B2041 THR C 33 SITE 1 AC3 2 HOH B2042 LEU C 121 SITE 1 AC4 5 GLU A 88 HOH A2004 LYS B 94 GLU B 95 SITE 2 AC4 5 HOH B2027 SITE 1 AC5 2 ASP A 12 HOH B2002 SITE 1 AC6 3 LYS C 55 ASP C 59 HOH C2019 SITE 1 AC7 4 GLU A 95 HOH A2027 HOH B2008 GLU C 88 CRYST1 77.000 77.000 160.000 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012987 0.007498 0.000000 0.00000 SCALE2 0.000000 0.014996 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006250 0.00000