data_5ANU # _entry.id 5ANU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5ANU PDBE EBI-64961 WWPDB D_1290064961 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 5ANV unspecified 'MTH1 IN COMPLEX WITH COMPOUND 15' PDB 5ANW unspecified 'MTH1 IN COMPLEX WITH COMPOUND 24' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5ANU _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-09-08 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Read, J.A.' 1 'Breed, J.' 2 # _citation.id primary _citation.title 'Potent and Selective Inhibitors of Mth1 Probe its Role in Cancer Cell Survival.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 59 _citation.page_first 2346 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26878898 _citation.pdbx_database_id_DOI 10.1021/ACS.JMEDCHEM.5B01760 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kettle, J.G.' 1 primary 'Alwan, H.' 2 primary 'Bista, M.' 3 primary 'Breed, J.' 4 primary 'Davies, N.L.' 5 primary 'Eckersley, K.' 6 primary 'Fillery, S.' 7 primary 'Foote, K.M.' 8 primary 'Goodwin, L.' 9 primary 'Jones, D.R.' 10 primary 'Kack, H.' 11 primary 'Lau, A.' 12 primary 'Nissink, J.W.' 13 primary 'Read, J.' 14 primary 'Scott, J.S.' 15 primary 'Taylor, B.' 16 primary 'Walker, G.' 17 primary 'Wissler, L.' 18 primary 'Wylot, M.' 19 # _cell.entry_id 5ANU _cell.length_a 60.210 _cell.length_b 66.830 _cell.length_c 36.090 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ANU _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE' 18099.590 1 '3.6.1.55, 3.6.1.56' ? 'UNP RESIDUES 42-197' ? 2 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 3 non-polymer syn '13-(METHYLAMINO)-23,24,25-TRIOXA-17,18,19,21-TETRAZATETRACYCLO-TRICOSA-1(3),2(10),4(11),12(14),13(18),16(19)-HEXAN-15-ONE' 357.364 1 ? ? ? ? 4 water nat water 18.015 64 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '2-HYDROXY-DATP DIPHOSPHATASE, 8-OXO-DGTPASE, NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 1, NUDIX MOTIF 1, MTH1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEP ELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEP ELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLY n 1 5 ALA n 1 6 SER n 1 7 ARG n 1 8 LEU n 1 9 TYR n 1 10 THR n 1 11 LEU n 1 12 VAL n 1 13 LEU n 1 14 VAL n 1 15 LEU n 1 16 GLN n 1 17 PRO n 1 18 GLN n 1 19 ARG n 1 20 VAL n 1 21 LEU n 1 22 LEU n 1 23 GLY n 1 24 MET n 1 25 LYS n 1 26 LYS n 1 27 ARG n 1 28 GLY n 1 29 PHE n 1 30 GLY n 1 31 ALA n 1 32 GLY n 1 33 ARG n 1 34 TRP n 1 35 ASN n 1 36 GLY n 1 37 PHE n 1 38 GLY n 1 39 GLY n 1 40 LYS n 1 41 VAL n 1 42 GLN n 1 43 GLU n 1 44 GLY n 1 45 GLU n 1 46 THR n 1 47 ILE n 1 48 GLU n 1 49 ASP n 1 50 GLY n 1 51 ALA n 1 52 ARG n 1 53 ARG n 1 54 GLU n 1 55 LEU n 1 56 GLN n 1 57 GLU n 1 58 GLU n 1 59 SER n 1 60 GLY n 1 61 LEU n 1 62 THR n 1 63 VAL n 1 64 ASP n 1 65 ALA n 1 66 LEU n 1 67 HIS n 1 68 LYS n 1 69 VAL n 1 70 GLY n 1 71 GLN n 1 72 ILE n 1 73 VAL n 1 74 PHE n 1 75 GLU n 1 76 PHE n 1 77 VAL n 1 78 GLY n 1 79 GLU n 1 80 PRO n 1 81 GLU n 1 82 LEU n 1 83 MET n 1 84 ASP n 1 85 VAL n 1 86 HIS n 1 87 VAL n 1 88 PHE n 1 89 CYS n 1 90 THR n 1 91 ASP n 1 92 SER n 1 93 ILE n 1 94 GLN n 1 95 GLY n 1 96 THR n 1 97 PRO n 1 98 VAL n 1 99 GLU n 1 100 SER n 1 101 ASP n 1 102 GLU n 1 103 MET n 1 104 ARG n 1 105 PRO n 1 106 CYS n 1 107 TRP n 1 108 PHE n 1 109 GLN n 1 110 LEU n 1 111 ASP n 1 112 GLN n 1 113 ILE n 1 114 PRO n 1 115 PHE n 1 116 LYS n 1 117 ASP n 1 118 MET n 1 119 TRP n 1 120 PRO n 1 121 ASP n 1 122 ASP n 1 123 SER n 1 124 TYR n 1 125 TRP n 1 126 PHE n 1 127 PRO n 1 128 LEU n 1 129 LEU n 1 130 LEU n 1 131 GLN n 1 132 LYS n 1 133 LYS n 1 134 LYS n 1 135 PHE n 1 136 HIS n 1 137 GLY n 1 138 TYR n 1 139 PHE n 1 140 LYS n 1 141 PHE n 1 142 GLN n 1 143 GLY n 1 144 GLN n 1 145 ASP n 1 146 THR n 1 147 ILE n 1 148 LEU n 1 149 ASP n 1 150 TYR n 1 151 THR n 1 152 LEU n 1 153 ARG n 1 154 GLU n 1 155 VAL n 1 156 ASP n 1 157 THR n 1 158 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant GOLD _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code 8ODP_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P36639 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5ANU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 158 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P36639 _struct_ref_seq.db_align_beg 42 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 197 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 156 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5ANU GLY A 1 ? UNP P36639 ? ? 'expression tag' -1 1 1 5ANU ALA A 2 ? UNP P36639 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 58T non-polymer . '13-(METHYLAMINO)-23,24,25-TRIOXA-17,18,19,21-TETRAZATETRACYCLO-TRICOSA-1(3),2(10),4(11),12(14),13(18),16(19)-HEXAN-15-ONE' ? 'C17 H19 N5 O4' 357.364 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5ANU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.01 _exptl_crystal.density_percent_sol 38.68 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PH 4.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2014-11-24 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97857 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_wavelength 0.97857 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5ANU _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 44.70 _reflns.d_resolution_high 1.80 _reflns.number_obs 13086 _reflns.number_all ? _reflns.percent_possible_obs 93.6 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.30 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.1 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.91 _reflns_shell.percent_possible_all 92.4 _reflns_shell.Rmerge_I_obs 0.41 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.20 _reflns_shell.pdbx_redundancy 3.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5ANU _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12428 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.73 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 93.56 _refine.ls_R_factor_obs 0.20933 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20668 _refine.ls_R_factor_R_free 0.25745 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 655 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.898 _refine.B_iso_mean 27.525 _refine.aniso_B[1][1] -0.46 _refine.aniso_B[2][2] 0.38 _refine.aniso_B[3][3] 0.08 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES WITH TLS ADDED' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.170 _refine.pdbx_overall_ESU_R_Free 0.159 _refine.overall_SU_ML 0.117 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.427 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1224 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 64 _refine_hist.number_atoms_total 1318 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 44.73 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.019 ? 1326 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1217 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.554 1.950 ? 1806 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.769 3.000 ? 2796 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.691 5.000 ? 162 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.627 24.098 ? 61 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.126 15.000 ? 209 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7.287 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.095 0.200 ? 188 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 1522 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 312 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.764 2.225 ? 640 'X-RAY DIFFRACTION' ? r_mcbond_other 1.743 2.224 ? 638 'X-RAY DIFFRACTION' ? r_mcangle_it 2.578 3.325 ? 804 'X-RAY DIFFRACTION' ? r_mcangle_other 2.580 3.326 ? 805 'X-RAY DIFFRACTION' ? r_scbond_it 2.661 2.572 ? 686 'X-RAY DIFFRACTION' ? r_scbond_other 2.660 2.576 ? 687 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 4.130 3.726 ? 1003 'X-RAY DIFFRACTION' ? r_long_range_B_refined 5.864 18.811 ? 1462 'X-RAY DIFFRACTION' ? r_long_range_B_other 5.767 18.578 ? 1447 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.803 _refine_ls_shell.d_res_low 1.850 _refine_ls_shell.number_reflns_R_work 855 _refine_ls_shell.R_factor_R_work 0.232 _refine_ls_shell.percent_reflns_obs 91.08 _refine_ls_shell.R_factor_R_free 0.220 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5ANU _struct.title 'MTH1 in complex with compound 15' _struct.pdbx_descriptor '7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE (E.C.3.6.1.55, 3.6.1.56)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5ANU _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, NUDT1, INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 46 ? GLY A 60 ? THR A 44 GLY A 58 1 ? 15 HELX_P HELX_P2 2 ASP A 111 ? ILE A 113 ? ASP A 109 ILE A 111 5 ? 3 HELX_P HELX_P3 3 PRO A 114 ? MET A 118 ? PRO A 112 MET A 116 5 ? 5 HELX_P HELX_P4 4 ASP A 121 ? GLN A 131 ? ASP A 119 GLN A 129 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 2 ? AC ? 2 ? AD ? 7 ? AE ? 6 ? AF ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? parallel AD 3 4 ? anti-parallel AD 4 5 ? parallel AD 5 6 ? anti-parallel AD 6 7 ? parallel AE 1 2 ? anti-parallel AE 2 3 ? parallel AE 3 4 ? anti-parallel AE 4 5 ? parallel AE 5 6 ? anti-parallel AF 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TRP A 34 ? ASN A 35 ? TRP A 32 ASN A 33 AA 2 ARG A 19 ? LYS A 25 ? ARG A 17 LYS A 23 AB 1 PHE A 37 ? LYS A 40 ? PHE A 35 LYS A 38 AB 2 SER A 6 ? LEU A 15 ? SER A 4 LEU A 13 AC 1 MET A 103 ? GLN A 109 ? MET A 101 GLN A 107 AC 2 ARG A 19 ? LYS A 25 ? ARG A 17 LYS A 23 AD 1 THR A 146 ? VAL A 155 ? THR A 144 VAL A 153 AD 2 LYS A 134 ? GLN A 142 ? LYS A 132 GLN A 140 AD 3 HIS A 67 ? PHE A 76 ? HIS A 65 PHE A 74 AD 4 LEU A 82 ? THR A 90 ? LEU A 80 THR A 88 AD 5 SER A 6 ? LEU A 15 ? SER A 4 LEU A 13 AD 6 ARG A 19 ? LYS A 25 ? ARG A 17 LYS A 23 AD 7 TRP A 34 ? ASN A 35 ? TRP A 32 ASN A 33 AE 1 THR A 146 ? VAL A 155 ? THR A 144 VAL A 153 AE 2 LYS A 134 ? GLN A 142 ? LYS A 132 GLN A 140 AE 3 HIS A 67 ? PHE A 76 ? HIS A 65 PHE A 74 AE 4 LEU A 82 ? THR A 90 ? LEU A 80 THR A 88 AE 5 SER A 6 ? LEU A 15 ? SER A 4 LEU A 13 AE 6 PHE A 37 ? LYS A 40 ? PHE A 35 LYS A 38 AF 1 THR A 62 ? VAL A 63 ? THR A 60 VAL A 61 AF 2 ILE A 93 ? GLN A 94 ? ILE A 91 GLN A 92 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ASN A 35 ? N ASN A 33 O GLY A 23 ? O GLY A 21 AB 1 2 N GLY A 39 ? N GLY A 37 O THR A 10 ? O THR A 8 AC 1 2 N PHE A 108 ? N PHE A 106 O VAL A 20 ? O VAL A 18 AD 1 2 N VAL A 155 ? N VAL A 153 O LYS A 134 ? O LYS A 132 AD 2 3 N PHE A 135 ? N PHE A 133 O VAL A 69 ? O VAL A 67 AD 3 4 N PHE A 74 ? N PHE A 72 O MET A 83 ? O MET A 81 AD 4 5 N ASP A 84 ? N ASP A 82 O ARG A 7 ? O ARG A 5 AD 5 6 N VAL A 14 ? N VAL A 12 O LEU A 21 ? O LEU A 19 AD 6 7 N GLY A 23 ? N GLY A 21 O ASN A 35 ? O ASN A 33 AE 1 2 N VAL A 155 ? N VAL A 153 O LYS A 134 ? O LYS A 132 AE 2 3 N PHE A 135 ? N PHE A 133 O VAL A 69 ? O VAL A 67 AE 3 4 N PHE A 74 ? N PHE A 72 O MET A 83 ? O MET A 81 AE 4 5 N ASP A 84 ? N ASP A 82 O ARG A 7 ? O ARG A 5 AE 5 6 N VAL A 12 ? N VAL A 10 O PHE A 37 ? O PHE A 35 AF 1 2 N THR A 62 ? N THR A 60 O GLN A 94 ? O GLN A 92 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE DMS A 1157' AC2 Software ? ? ? ? 13 'BINDING SITE FOR RESIDUE 58T A 1158' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 TYR A 150 ? TYR A 148 . ? 1_555 ? 2 AC1 3 THR A 151 ? THR A 149 . ? 1_555 ? 3 AC1 3 LEU A 152 ? LEU A 150 . ? 1_555 ? 4 AC2 13 TYR A 9 ? TYR A 7 . ? 1_555 ? 5 AC2 13 THR A 10 ? THR A 8 . ? 1_555 ? 6 AC2 13 LEU A 11 ? LEU A 9 . ? 1_555 ? 7 AC2 13 PHE A 29 ? PHE A 27 . ? 1_555 ? 8 AC2 13 ASN A 35 ? ASN A 33 . ? 1_555 ? 9 AC2 13 GLY A 36 ? GLY A 34 . ? 1_555 ? 10 AC2 13 GLY A 38 ? GLY A 36 . ? 1_555 ? 11 AC2 13 GLY A 39 ? GLY A 37 . ? 1_555 ? 12 AC2 13 PHE A 74 ? PHE A 72 . ? 1_555 ? 13 AC2 13 VAL A 85 ? VAL A 83 . ? 1_555 ? 14 AC2 13 TRP A 119 ? TRP A 117 . ? 1_555 ? 15 AC2 13 ASP A 121 ? ASP A 119 . ? 1_555 ? 16 AC2 13 ASP A 122 ? ASP A 120 . ? 1_555 ? # _database_PDB_matrix.entry_id 5ANU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5ANU _atom_sites.fract_transf_matrix[1][1] 0.016609 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014963 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027709 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 ALA 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 GLY 4 2 ? ? ? A . n A 1 5 ALA 5 3 3 ALA ALA A . n A 1 6 SER 6 4 4 SER SER A . n A 1 7 ARG 7 5 5 ARG ARG A . n A 1 8 LEU 8 6 6 LEU LEU A . n A 1 9 TYR 9 7 7 TYR TYR A . n A 1 10 THR 10 8 8 THR THR A . n A 1 11 LEU 11 9 9 LEU LEU A . n A 1 12 VAL 12 10 10 VAL VAL A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 VAL 14 12 12 VAL VAL A . n A 1 15 LEU 15 13 13 LEU LEU A . n A 1 16 GLN 16 14 14 GLN GLN A . n A 1 17 PRO 17 15 15 PRO PRO A . n A 1 18 GLN 18 16 16 GLN GLN A . n A 1 19 ARG 19 17 17 ARG ARG A . n A 1 20 VAL 20 18 18 VAL VAL A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 LEU 22 20 20 LEU LEU A . n A 1 23 GLY 23 21 21 GLY GLY A . n A 1 24 MET 24 22 22 MET MET A . n A 1 25 LYS 25 23 23 LYS LYS A . n A 1 26 LYS 26 24 24 LYS LYS A . n A 1 27 ARG 27 25 25 ARG ARG A . n A 1 28 GLY 28 26 26 GLY GLY A . n A 1 29 PHE 29 27 27 PHE PHE A . n A 1 30 GLY 30 28 28 GLY GLY A . n A 1 31 ALA 31 29 29 ALA ALA A . n A 1 32 GLY 32 30 30 GLY GLY A . n A 1 33 ARG 33 31 31 ARG ARG A . n A 1 34 TRP 34 32 32 TRP TRP A . n A 1 35 ASN 35 33 33 ASN ASN A . n A 1 36 GLY 36 34 34 GLY GLY A . n A 1 37 PHE 37 35 35 PHE PHE A . n A 1 38 GLY 38 36 36 GLY GLY A . n A 1 39 GLY 39 37 37 GLY GLY A . n A 1 40 LYS 40 38 38 LYS LYS A . n A 1 41 VAL 41 39 39 VAL VAL A . n A 1 42 GLN 42 40 40 GLN GLN A . n A 1 43 GLU 43 41 41 GLU GLU A . n A 1 44 GLY 44 42 42 GLY GLY A . n A 1 45 GLU 45 43 43 GLU GLU A . n A 1 46 THR 46 44 44 THR THR A . n A 1 47 ILE 47 45 45 ILE ILE A . n A 1 48 GLU 48 46 46 GLU GLU A . n A 1 49 ASP 49 47 47 ASP ASP A . n A 1 50 GLY 50 48 48 GLY GLY A . n A 1 51 ALA 51 49 49 ALA ALA A . n A 1 52 ARG 52 50 50 ARG ARG A . n A 1 53 ARG 53 51 51 ARG ARG A . n A 1 54 GLU 54 52 52 GLU GLU A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 GLN 56 54 54 GLN GLN A . n A 1 57 GLU 57 55 55 GLU GLU A . n A 1 58 GLU 58 56 56 GLU GLU A . n A 1 59 SER 59 57 57 SER SER A . n A 1 60 GLY 60 58 58 GLY GLY A . n A 1 61 LEU 61 59 59 LEU LEU A . n A 1 62 THR 62 60 60 THR THR A . n A 1 63 VAL 63 61 61 VAL VAL A . n A 1 64 ASP 64 62 62 ASP ASP A . n A 1 65 ALA 65 63 63 ALA ALA A . n A 1 66 LEU 66 64 64 LEU LEU A . n A 1 67 HIS 67 65 65 HIS HIS A . n A 1 68 LYS 68 66 66 LYS LYS A . n A 1 69 VAL 69 67 67 VAL VAL A . n A 1 70 GLY 70 68 68 GLY GLY A . n A 1 71 GLN 71 69 69 GLN GLN A . n A 1 72 ILE 72 70 70 ILE ILE A . n A 1 73 VAL 73 71 71 VAL VAL A . n A 1 74 PHE 74 72 72 PHE PHE A . n A 1 75 GLU 75 73 73 GLU GLU A . n A 1 76 PHE 76 74 74 PHE PHE A . n A 1 77 VAL 77 75 75 VAL VAL A . n A 1 78 GLY 78 76 76 GLY GLY A . n A 1 79 GLU 79 77 77 GLU GLU A . n A 1 80 PRO 80 78 78 PRO PRO A . n A 1 81 GLU 81 79 79 GLU GLU A . n A 1 82 LEU 82 80 80 LEU LEU A . n A 1 83 MET 83 81 81 MET MET A . n A 1 84 ASP 84 82 82 ASP ASP A . n A 1 85 VAL 85 83 83 VAL VAL A . n A 1 86 HIS 86 84 84 HIS HIS A . n A 1 87 VAL 87 85 85 VAL VAL A . n A 1 88 PHE 88 86 86 PHE PHE A . n A 1 89 CYS 89 87 87 CYS CYS A . n A 1 90 THR 90 88 88 THR THR A . n A 1 91 ASP 91 89 89 ASP ASP A . n A 1 92 SER 92 90 90 SER SER A . n A 1 93 ILE 93 91 91 ILE ILE A . n A 1 94 GLN 94 92 92 GLN GLN A . n A 1 95 GLY 95 93 93 GLY GLY A . n A 1 96 THR 96 94 94 THR THR A . n A 1 97 PRO 97 95 95 PRO PRO A . n A 1 98 VAL 98 96 96 VAL VAL A . n A 1 99 GLU 99 97 97 GLU GLU A . n A 1 100 SER 100 98 98 SER SER A . n A 1 101 ASP 101 99 99 ASP ASP A . n A 1 102 GLU 102 100 100 GLU GLU A . n A 1 103 MET 103 101 101 MET MET A . n A 1 104 ARG 104 102 102 ARG ARG A . n A 1 105 PRO 105 103 103 PRO PRO A . n A 1 106 CYS 106 104 104 CYS CYS A . n A 1 107 TRP 107 105 105 TRP TRP A . n A 1 108 PHE 108 106 106 PHE PHE A . n A 1 109 GLN 109 107 107 GLN GLN A . n A 1 110 LEU 110 108 108 LEU LEU A . n A 1 111 ASP 111 109 109 ASP ASP A . n A 1 112 GLN 112 110 110 GLN GLN A . n A 1 113 ILE 113 111 111 ILE ILE A . n A 1 114 PRO 114 112 112 PRO PRO A . n A 1 115 PHE 115 113 113 PHE PHE A . n A 1 116 LYS 116 114 114 LYS LYS A . n A 1 117 ASP 117 115 115 ASP ASP A . n A 1 118 MET 118 116 116 MET MET A . n A 1 119 TRP 119 117 117 TRP TRP A . n A 1 120 PRO 120 118 118 PRO PRO A . n A 1 121 ASP 121 119 119 ASP ASP A . n A 1 122 ASP 122 120 120 ASP ASP A . n A 1 123 SER 123 121 121 SER SER A . n A 1 124 TYR 124 122 122 TYR TYR A . n A 1 125 TRP 125 123 123 TRP TRP A . n A 1 126 PHE 126 124 124 PHE PHE A . n A 1 127 PRO 127 125 125 PRO PRO A . n A 1 128 LEU 128 126 126 LEU LEU A . n A 1 129 LEU 129 127 127 LEU LEU A . n A 1 130 LEU 130 128 128 LEU LEU A . n A 1 131 GLN 131 129 129 GLN GLN A . n A 1 132 LYS 132 130 130 LYS LYS A . n A 1 133 LYS 133 131 131 LYS LYS A . n A 1 134 LYS 134 132 132 LYS LYS A . n A 1 135 PHE 135 133 133 PHE PHE A . n A 1 136 HIS 136 134 134 HIS HIS A . n A 1 137 GLY 137 135 135 GLY GLY A . n A 1 138 TYR 138 136 136 TYR TYR A . n A 1 139 PHE 139 137 137 PHE PHE A . n A 1 140 LYS 140 138 138 LYS LYS A . n A 1 141 PHE 141 139 139 PHE PHE A . n A 1 142 GLN 142 140 140 GLN GLN A . n A 1 143 GLY 143 141 141 GLY GLY A . n A 1 144 GLN 144 142 142 GLN GLN A . n A 1 145 ASP 145 143 143 ASP ASP A . n A 1 146 THR 146 144 144 THR THR A . n A 1 147 ILE 147 145 145 ILE ILE A . n A 1 148 LEU 148 146 146 LEU LEU A . n A 1 149 ASP 149 147 147 ASP ASP A . n A 1 150 TYR 150 148 148 TYR TYR A . n A 1 151 THR 151 149 149 THR THR A . n A 1 152 LEU 152 150 150 LEU LEU A . n A 1 153 ARG 153 151 151 ARG ARG A . n A 1 154 GLU 154 152 152 GLU GLU A . n A 1 155 VAL 155 153 153 VAL VAL A . n A 1 156 ASP 156 154 154 ASP ASP A . n A 1 157 THR 157 155 155 THR THR A . n A 1 158 VAL 158 156 156 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS 1 1157 1157 DMS DMS A . C 3 58T 1 1158 1158 58T 58T A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-02 2 'Structure model' 1 1 2016-04-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0073 ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 AMoRE phasing . ? 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 62 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -74.26 _pdbx_validate_torsion.psi -96.13 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 25 ? CG ? A ARG 27 CG 2 1 Y 1 A ARG 25 ? CD ? A ARG 27 CD 3 1 Y 1 A ARG 25 ? NE ? A ARG 27 NE 4 1 Y 1 A ARG 25 ? CZ ? A ARG 27 CZ 5 1 Y 1 A ARG 25 ? NH1 ? A ARG 27 NH1 6 1 Y 1 A ARG 25 ? NH2 ? A ARG 27 NH2 7 1 Y 1 A ASP 62 ? CG ? A ASP 64 CG 8 1 Y 1 A ASP 62 ? OD1 ? A ASP 64 OD1 9 1 Y 1 A ASP 62 ? OD2 ? A ASP 64 OD2 10 1 Y 1 A GLU 77 ? CG ? A GLU 79 CG 11 1 Y 1 A GLU 77 ? CD ? A GLU 79 CD 12 1 Y 1 A GLU 77 ? OE1 ? A GLU 79 OE1 13 1 Y 1 A GLU 77 ? OE2 ? A GLU 79 OE2 14 1 Y 1 A GLU 79 ? CG ? A GLU 81 CG 15 1 Y 1 A GLU 79 ? CD ? A GLU 81 CD 16 1 Y 1 A GLU 79 ? OE1 ? A GLU 81 OE1 17 1 Y 1 A GLU 79 ? OE2 ? A GLU 81 OE2 18 1 Y 1 A GLU 100 ? CG ? A GLU 102 CG 19 1 Y 1 A GLU 100 ? CD ? A GLU 102 CD 20 1 Y 1 A GLU 100 ? OE1 ? A GLU 102 OE1 21 1 Y 1 A GLU 100 ? OE2 ? A GLU 102 OE2 22 1 Y 1 A LYS 114 ? CG ? A LYS 116 CG 23 1 Y 1 A LYS 114 ? CD ? A LYS 116 CD 24 1 Y 1 A LYS 114 ? CE ? A LYS 116 CE 25 1 Y 1 A LYS 114 ? NZ ? A LYS 116 NZ 26 1 Y 1 A LYS 130 ? CD ? A LYS 132 CD 27 1 Y 1 A LYS 130 ? CE ? A LYS 132 CE 28 1 Y 1 A LYS 130 ? NZ ? A LYS 132 NZ 29 1 Y 1 A LYS 132 ? CE ? A LYS 134 CE 30 1 Y 1 A LYS 132 ? NZ ? A LYS 134 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A ALA 0 ? A ALA 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A GLY 2 ? A GLY 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DIMETHYL SULFOXIDE' DMS 3 '13-(METHYLAMINO)-23,24,25-TRIOXA-17,18,19,21-TETRAZATETRACYCLO-TRICOSA-1(3),2(10),4(11),12(14),13(18),16(19)-HEXAN-15-ONE' 58T 4 water HOH #