data_5AOS # _entry.id 5AOS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.299 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5AOS PDBE EBI-65017 WWPDB D_1290065017 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 5AOT _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'VERY HIGH RESOLUTION STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM RUMINOCOCCUS FLAVEFACIENS FD-1 ENDOGLUCANASE CEL5A' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5AOS _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-09-11 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pires, A.J.' 1 'Ribeiro, T.' 2 'Thompson, A.' 3 'Venditto, I.' 4 'Fernandes, V.O.' 5 'Bule, P.' 6 'Santos, H.' 7 'Alves, V.D.' 8 'Pires, V.' 9 'Ferreira, L.M.A.' 10 'Fontes, C.M.G.A.' 11 'Najmudin, S.' 12 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition.' 'Proc. Natl. Acad. Sci. U.S.A.' 113 7136 7141 2016 PNASA6 US 1091-6490 0040 ? 27298375 10.1073/pnas.1601558113 1 ;Purification and Crystallographic Studies of a Putative Carbohydrate-Binding Module from the Ruminococcus Flavefaciens Fd-1 Endoglucanase Cel5A. ; 'Acta Crystallogr.,Sect.F' 71 958 ? 2015 ? DK 1744-3091 ? ? 26249681 10.1107/S2053230X15009784 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Venditto, I.' 1 ? primary 'Luis, A.S.' 2 ? primary 'Rydahl, M.' 3 ? primary 'Schuckel, J.' 4 ? primary 'Fernandes, V.O.' 5 ? primary 'Vidal-Melgosa, S.' 6 ? primary 'Bule, P.' 7 ? primary 'Goyal, A.' 8 ? primary 'Pires, V.M.' 9 ? primary 'Dourado, C.G.' 10 ? primary 'Ferreira, L.M.' 11 ? primary 'Coutinho, P.M.' 12 ? primary 'Henrissat, B.' 13 ? primary 'Knox, J.P.' 14 ? primary 'Basle, A.' 15 ? primary 'Najmudin, S.' 16 ? primary 'Gilbert, H.J.' 17 ? primary 'Willats, W.G.' 18 ? primary 'Fontes, C.M.' 19 ? 1 'Pires, A.J.' 20 ? 1 'Ribeiro, T.' 21 ? 1 'Thompson, A.' 22 ? 1 'Venditto, I.' 23 ? 1 'Fernandes, V.O.' 24 ? 1 'Bule, P.' 25 ? 1 'Santos, H.' 26 ? 1 'Alves, V.D.' 27 ? 1 'Pires, V.' 28 ? 1 'Ferreira, L.M.A.' 29 ? 1 'Fontes, C.M.G.A.' 30 ? 1 'Najmudin, S.' 31 ? # _cell.entry_id 5AOS _cell.length_a 43.393 _cell.length_b 45.214 _cell.length_c 49.563 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AOS _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Carbohydrate binding module' 11806.894 1 ? ? 'CARBOHYDRATE BINDING MODULE, UNP RESIDUES 28-127' ? 2 non-polymer syn 'CACODYLATE ION' 136.989 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 4 water nat water 18.015 98 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGAEEESTAILYPFTISGNDRNGNFTINFKGTPNSTNNGCIGYSYNGDWEKIEWEGSCDGNGNLVVEVPMSKIPAGVTSG EIQIWWHSGDLKMTDYKALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MGAEEESTAILYPFTISGNDRNGNFTINFKGTPNSTNNGCIGYSYNGDWEKIEWEGSCDGNGNLVVEVPMSKIPAGVTSG EIQIWWHSGDLKMTDYKALEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 ALA n 1 4 GLU n 1 5 GLU n 1 6 GLU n 1 7 SER n 1 8 THR n 1 9 ALA n 1 10 ILE n 1 11 LEU n 1 12 TYR n 1 13 PRO n 1 14 PHE n 1 15 THR n 1 16 ILE n 1 17 SER n 1 18 GLY n 1 19 ASN n 1 20 ASP n 1 21 ARG n 1 22 ASN n 1 23 GLY n 1 24 ASN n 1 25 PHE n 1 26 THR n 1 27 ILE n 1 28 ASN n 1 29 PHE n 1 30 LYS n 1 31 GLY n 1 32 THR n 1 33 PRO n 1 34 ASN n 1 35 SER n 1 36 THR n 1 37 ASN n 1 38 ASN n 1 39 GLY n 1 40 CYS n 1 41 ILE n 1 42 GLY n 1 43 TYR n 1 44 SER n 1 45 TYR n 1 46 ASN n 1 47 GLY n 1 48 ASP n 1 49 TRP n 1 50 GLU n 1 51 LYS n 1 52 ILE n 1 53 GLU n 1 54 TRP n 1 55 GLU n 1 56 GLY n 1 57 SER n 1 58 CYS n 1 59 ASP n 1 60 GLY n 1 61 ASN n 1 62 GLY n 1 63 ASN n 1 64 LEU n 1 65 VAL n 1 66 VAL n 1 67 GLU n 1 68 VAL n 1 69 PRO n 1 70 MET n 1 71 SER n 1 72 LYS n 1 73 ILE n 1 74 PRO n 1 75 ALA n 1 76 GLY n 1 77 VAL n 1 78 THR n 1 79 SER n 1 80 GLY n 1 81 GLU n 1 82 ILE n 1 83 GLN n 1 84 ILE n 1 85 TRP n 1 86 TRP n 1 87 HIS n 1 88 SER n 1 89 GLY n 1 90 ASP n 1 91 LEU n 1 92 LYS n 1 93 MET n 1 94 THR n 1 95 ASP n 1 96 TYR n 1 97 LYS n 1 98 ALA n 1 99 LEU n 1 100 GLU n 1 101 HIS n 1 102 HIS n 1 103 HIS n 1 104 HIS n 1 105 HIS n 1 106 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 106 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Ruminococcus flavefaciens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1265 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A1A9TAF3_RUMFL _struct_ref.pdbx_db_accession A0A1A9TAF3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGAEEESTAILYPFTISGNDRNGNFTINFKGTPNSTNNGCIGYSYNGDWEKIEWEGSCDGNGNLVVEVPMSKIPAGVTSG EIQIWWHSGDLKMTDYKALEHHHHHH ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5AOS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A1A9TAF3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 106 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 406 _struct_ref_seq.pdbx_auth_seq_align_end 511 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CAC non-polymer . 'CACODYLATE ION' dimethylarsinate 'C2 H6 As O2 -1' 136.989 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5AOS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.85 _exptl_crystal.density_percent_sol 34 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;20 MG/ML PROTEIN IN.2 M SODIUM ACETATE, 0.1 M CACODYLIC ACID PH 6.5, 30%(W/V) POLYETHYLENE GLYCOL 8000. 30%(V/V) GLYCEROL ADDED TO THE CRYSTALLIZATION BUFFER AS CRYOPROTECTANT ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2014-11-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.04408 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_wavelength 1.04408 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5AOS _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 33.40 _reflns.d_resolution_high 1.29 _reflns.number_obs 25196 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.10 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.0 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.29 _reflns_shell.d_res_low 1.34 _reflns_shell.percent_possible_all 98.6 _reflns_shell.Rmerge_I_obs 0.15 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.40 _reflns_shell.pdbx_redundancy 5.7 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5AOS _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 23770 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.40 _refine.ls_d_res_high 1.29 _refine.ls_percent_reflns_obs 99.50 _refine.ls_R_factor_obs 0.12655 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.12592 _refine.ls_R_factor_R_free 0.13829 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1250 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.975 _refine.B_iso_mean 12.248 _refine.aniso_B[1][1] 0.23 _refine.aniso_B[2][2] 0.18 _refine.aniso_B[3][3] -0.40 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii 0.70 _refine.pdbx_solvent_shrinkage_radii 0.70 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY. PDB_REDO WAS USED FOR VALIDATING IN THE FINAL ROUND OF REFINEMENT. DISORDERED REGIONS WERE MODELED STEREOCHEMICALLY ; _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.041 _refine.pdbx_overall_ESU_R_Free 0.036 _refine.overall_SU_ML 0.020 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.998 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 786 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 913 _refine_hist.d_res_high 1.29 _refine_hist.d_res_low 33.40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.019 ? 867 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 762 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.903 1.916 ? 1180 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.012 3.000 ? 1767 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.599 5.000 ? 109 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.886 25.556 ? 45 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 10.754 15.000 ? 130 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8.942 15.000 ? 1 'X-RAY DIFFRACTION' ? r_chiral_restr 0.128 0.200 ? 120 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 1000 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 211 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.145 0.960 ? 409 'X-RAY DIFFRACTION' ? r_mcbond_other 1.132 0.954 ? 408 'X-RAY DIFFRACTION' ? r_mcangle_it 1.635 1.444 ? 512 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.631 1.267 ? 458 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 3.169 3.000 ? 1629 'X-RAY DIFFRACTION' ? r_sphericity_free 24.251 5.000 ? 29 'X-RAY DIFFRACTION' ? r_sphericity_bonded 7.929 5.000 ? 1673 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.291 _refine_ls_shell.d_res_low 1.324 _refine_ls_shell.number_reflns_R_work 1676 _refine_ls_shell.R_factor_R_work 0.112 _refine_ls_shell.percent_reflns_obs 97.99 _refine_ls_shell.R_factor_R_free 0.155 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5AOS _struct.title 'Structure of a novel carbohydrate binding module from Ruminococcus flavefaciens FD-1 endoglucanase Cel5A solved at the As edge' _struct.pdbx_descriptor 'CARBOHYDRATE BINDING MODULE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5AOS _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text ;SUGAR BINDING PROTEIN, CARBOHYDRATE BINDING MODULE, ENDOGLUCANASE CEL5A, CELLULOSOME, RUMINOCOCCUS FLAVEFACIENS FD-1, CARBOHYDRATE ACTIVE ENZYME ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 71 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ILE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 73 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 476 _struct_conf.end_auth_comp_id ILE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 478 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ILE A 10 ? THR A 15 ? ILE A 415 THR A 420 AA 2 SER A 79 ? HIS A 87 ? SER A 484 HIS A 492 AA 3 THR A 36 ? TYR A 45 ? THR A 441 TYR A 450 AA 4 ASP A 48 ? SER A 57 ? ASP A 453 SER A 462 AB 1 ASN A 63 ? PRO A 69 ? ASN A 468 PRO A 474 AB 2 ASN A 24 ? GLY A 31 ? ASN A 429 GLY A 436 AB 3 LEU A 91 ? ALA A 98 ? LEU A 496 ALA A 503 AB 4 HIS A 101 ? HIS A 104 ? HIS A 506 HIS A 509 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 14 ? N PHE A 419 O GLY A 80 ? O GLY A 485 AA 2 3 N TRP A 85 ? N TRP A 490 O ASN A 38 ? O ASN A 443 AA 3 4 N TYR A 45 ? N TYR A 450 O ASP A 48 ? O ASP A 453 AB 1 2 N VAL A 68 ? N VAL A 473 O PHE A 25 ? O PHE A 430 AB 2 3 N LYS A 30 ? N LYS A 435 O LYS A 92 ? O LYS A 497 AB 3 4 N ALA A 98 ? N ALA A 503 O HIS A 101 ? O HIS A 506 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CAC A 1128' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A 1129' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A 1130' AC4 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 1131' AC5 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE GOL A 1132' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASN A 46 ? ASN A 451 . ? 4_456 ? 2 AC1 6 HIS A 101 ? HIS A 506 . ? 1_555 ? 3 AC1 6 HIS A 102 ? HIS A 507 . ? 1_555 ? 4 AC1 6 HIS A 103 ? HIS A 508 . ? 1_555 ? 5 AC1 6 HIS A 104 ? HIS A 509 . ? 1_555 ? 6 AC1 6 HOH G . ? HOH A 2097 . ? 1_555 ? 7 AC2 6 PRO A 13 ? PRO A 418 . ? 2_664 ? 8 AC2 6 ASN A 24 ? ASN A 429 . ? 1_555 ? 9 AC2 6 GLU A 67 ? GLU A 472 . ? 1_555 ? 10 AC2 6 PRO A 69 ? PRO A 474 . ? 1_555 ? 11 AC2 6 GLU A 81 ? GLU A 486 . ? 2_664 ? 12 AC2 6 HOH G . ? HOH A 2074 . ? 1_555 ? 13 AC3 6 TRP A 54 ? TRP A 459 . ? 1_555 ? 14 AC3 6 GLU A 55 ? GLU A 460 . ? 1_555 ? 15 AC3 6 VAL A 66 ? VAL A 471 . ? 1_555 ? 16 AC3 6 GLU A 67 ? GLU A 472 . ? 1_555 ? 17 AC3 6 HOH G . ? HOH A 2055 . ? 1_555 ? 18 AC3 6 HOH G . ? HOH A 2068 . ? 1_555 ? 19 AC4 7 TRP A 85 ? TRP A 490 . ? 1_555 ? 20 AC4 7 TRP A 86 ? TRP A 491 . ? 1_555 ? 21 AC4 7 HIS A 87 ? HIS A 492 . ? 1_555 ? 22 AC4 7 HOH G . ? HOH A 2029 . ? 4_566 ? 23 AC4 7 HOH G . ? HOH A 2082 . ? 1_555 ? 24 AC4 7 HOH G . ? HOH A 2083 . ? 1_555 ? 25 AC4 7 HOH G . ? HOH A 2084 . ? 1_555 ? 26 AC5 9 SER A 71 ? SER A 476 . ? 1_555 ? 27 AC5 9 LYS A 72 ? LYS A 477 . ? 1_555 ? 28 AC5 9 PRO A 74 ? PRO A 479 . ? 1_555 ? 29 AC5 9 LYS A 92 ? LYS A 497 . ? 2_664 ? 30 AC5 9 HIS A 105 ? HIS A 510 . ? 2_664 ? 31 AC5 9 HIS A 106 ? HIS A 511 . ? 2_664 ? 32 AC5 9 HOH G . ? HOH A 2071 . ? 1_555 ? 33 AC5 9 HOH G . ? HOH A 2075 . ? 1_555 ? 34 AC5 9 HOH G . ? HOH A 2098 . ? 1_555 ? # _database_PDB_matrix.entry_id 5AOS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5AOS _atom_sites.fract_transf_matrix[1][1] 0.023045 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022117 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020176 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol AS C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 406 ? ? ? A . n A 1 2 GLY 2 407 ? ? ? A . n A 1 3 ALA 3 408 ? ? ? A . n A 1 4 GLU 4 409 ? ? ? A . n A 1 5 GLU 5 410 ? ? ? A . n A 1 6 GLU 6 411 ? ? ? A . n A 1 7 SER 7 412 412 SER SER A . n A 1 8 THR 8 413 413 THR THR A . n A 1 9 ALA 9 414 414 ALA ALA A . n A 1 10 ILE 10 415 415 ILE ILE A . n A 1 11 LEU 11 416 416 LEU LEU A . n A 1 12 TYR 12 417 417 TYR TYR A . n A 1 13 PRO 13 418 418 PRO PRO A . n A 1 14 PHE 14 419 419 PHE PHE A . n A 1 15 THR 15 420 420 THR THR A . n A 1 16 ILE 16 421 421 ILE ILE A . n A 1 17 SER 17 422 422 SER SER A . n A 1 18 GLY 18 423 423 GLY GLY A . n A 1 19 ASN 19 424 424 ASN ASN A . n A 1 20 ASP 20 425 425 ASP ASP A . n A 1 21 ARG 21 426 426 ARG ARG A . n A 1 22 ASN 22 427 427 ASN ASN A . n A 1 23 GLY 23 428 428 GLY GLY A . n A 1 24 ASN 24 429 429 ASN ASN A . n A 1 25 PHE 25 430 430 PHE PHE A . n A 1 26 THR 26 431 431 THR THR A . n A 1 27 ILE 27 432 432 ILE ILE A . n A 1 28 ASN 28 433 433 ASN ASN A . n A 1 29 PHE 29 434 434 PHE PHE A . n A 1 30 LYS 30 435 435 LYS LYS A . n A 1 31 GLY 31 436 436 GLY GLY A . n A 1 32 THR 32 437 437 THR THR A . n A 1 33 PRO 33 438 438 PRO PRO A . n A 1 34 ASN 34 439 439 ASN ASN A . n A 1 35 SER 35 440 440 SER SER A . n A 1 36 THR 36 441 441 THR THR A . n A 1 37 ASN 37 442 442 ASN ASN A . n A 1 38 ASN 38 443 443 ASN ASN A . n A 1 39 GLY 39 444 444 GLY GLY A . n A 1 40 CYS 40 445 445 CYS CYS A . n A 1 41 ILE 41 446 446 ILE ILE A . n A 1 42 GLY 42 447 447 GLY GLY A . n A 1 43 TYR 43 448 448 TYR TYR A . n A 1 44 SER 44 449 449 SER SER A . n A 1 45 TYR 45 450 450 TYR TYR A . n A 1 46 ASN 46 451 451 ASN ASN A . n A 1 47 GLY 47 452 452 GLY GLY A . n A 1 48 ASP 48 453 453 ASP ASP A . n A 1 49 TRP 49 454 454 TRP TRP A . n A 1 50 GLU 50 455 455 GLU GLU A . n A 1 51 LYS 51 456 456 LYS LYS A . n A 1 52 ILE 52 457 457 ILE ILE A . n A 1 53 GLU 53 458 458 GLU GLU A . n A 1 54 TRP 54 459 459 TRP TRP A . n A 1 55 GLU 55 460 460 GLU GLU A . n A 1 56 GLY 56 461 461 GLY GLY A . n A 1 57 SER 57 462 462 SER SER A . n A 1 58 CYS 58 463 463 CYS CYS A . n A 1 59 ASP 59 464 464 ASP ASP A . n A 1 60 GLY 60 465 465 GLY GLY A . n A 1 61 ASN 61 466 466 ASN ASN A . n A 1 62 GLY 62 467 467 GLY GLY A . n A 1 63 ASN 63 468 468 ASN ASN A . n A 1 64 LEU 64 469 469 LEU LEU A . n A 1 65 VAL 65 470 470 VAL VAL A . n A 1 66 VAL 66 471 471 VAL VAL A . n A 1 67 GLU 67 472 472 GLU GLU A . n A 1 68 VAL 68 473 473 VAL VAL A . n A 1 69 PRO 69 474 474 PRO PRO A . n A 1 70 MET 70 475 475 MET MET A . n A 1 71 SER 71 476 476 SER SER A . n A 1 72 LYS 72 477 477 LYS LYS A . n A 1 73 ILE 73 478 478 ILE ILE A . n A 1 74 PRO 74 479 479 PRO PRO A . n A 1 75 ALA 75 480 480 ALA ALA A . n A 1 76 GLY 76 481 481 GLY GLY A . n A 1 77 VAL 77 482 482 VAL VAL A . n A 1 78 THR 78 483 483 THR THR A . n A 1 79 SER 79 484 484 SER SER A . n A 1 80 GLY 80 485 485 GLY GLY A . n A 1 81 GLU 81 486 486 GLU GLU A . n A 1 82 ILE 82 487 487 ILE ILE A . n A 1 83 GLN 83 488 488 GLN GLN A . n A 1 84 ILE 84 489 489 ILE ILE A . n A 1 85 TRP 85 490 490 TRP TRP A . n A 1 86 TRP 86 491 491 TRP TRP A . n A 1 87 HIS 87 492 492 HIS HIS A . n A 1 88 SER 88 493 493 SER SER A . n A 1 89 GLY 89 494 494 GLY GLY A . n A 1 90 ASP 90 495 495 ASP ASP A . n A 1 91 LEU 91 496 496 LEU LEU A . n A 1 92 LYS 92 497 497 LYS LYS A . n A 1 93 MET 93 498 498 MET MET A . n A 1 94 THR 94 499 499 THR THR A . n A 1 95 ASP 95 500 500 ASP ASP A . n A 1 96 TYR 96 501 501 TYR TYR A . n A 1 97 LYS 97 502 502 LYS LYS A . n A 1 98 ALA 98 503 503 ALA ALA A . n A 1 99 LEU 99 504 504 LEU LEU A . n A 1 100 GLU 100 505 505 GLU GLU A . n A 1 101 HIS 101 506 506 HIS HIS A . n A 1 102 HIS 102 507 507 HIS HIS A . n A 1 103 HIS 103 508 508 HIS HIS A . n A 1 104 HIS 104 509 509 HIS HIS A . n A 1 105 HIS 105 510 510 HIS HIS A . n A 1 106 HIS 106 511 511 HIS HIS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CAC 1 1128 1128 CAC CAC A . C 3 GOL 1 1129 1129 GOL GOL A . D 3 GOL 1 1130 1130 GOL GOL A . E 3 GOL 1 1131 1131 GOL GOL A . F 3 GOL 1 1132 1132 GOL GOL A . G 4 HOH 1 2001 2001 HOH HOH A . G 4 HOH 2 2002 2002 HOH HOH A . G 4 HOH 3 2003 2003 HOH HOH A . G 4 HOH 4 2004 2004 HOH HOH A . G 4 HOH 5 2005 2005 HOH HOH A . G 4 HOH 6 2006 2006 HOH HOH A . G 4 HOH 7 2007 2007 HOH HOH A . G 4 HOH 8 2008 2008 HOH HOH A . G 4 HOH 9 2009 2009 HOH HOH A . G 4 HOH 10 2010 2010 HOH HOH A . G 4 HOH 11 2011 2011 HOH HOH A . G 4 HOH 12 2012 2012 HOH HOH A . G 4 HOH 13 2013 2013 HOH HOH A . G 4 HOH 14 2014 2014 HOH HOH A . G 4 HOH 15 2015 2015 HOH HOH A . G 4 HOH 16 2016 2016 HOH HOH A . G 4 HOH 17 2017 2017 HOH HOH A . G 4 HOH 18 2018 2018 HOH HOH A . G 4 HOH 19 2019 2019 HOH HOH A . G 4 HOH 20 2020 2020 HOH HOH A . G 4 HOH 21 2021 2021 HOH HOH A . G 4 HOH 22 2022 2022 HOH HOH A . G 4 HOH 23 2023 2023 HOH HOH A . G 4 HOH 24 2024 2024 HOH HOH A . G 4 HOH 25 2025 2025 HOH HOH A . G 4 HOH 26 2026 2026 HOH HOH A . G 4 HOH 27 2027 2027 HOH HOH A . G 4 HOH 28 2028 2028 HOH HOH A . G 4 HOH 29 2029 2029 HOH HOH A . G 4 HOH 30 2030 2030 HOH HOH A . G 4 HOH 31 2031 2031 HOH HOH A . G 4 HOH 32 2032 2032 HOH HOH A . G 4 HOH 33 2033 2033 HOH HOH A . G 4 HOH 34 2034 2034 HOH HOH A . G 4 HOH 35 2035 2035 HOH HOH A . G 4 HOH 36 2036 2036 HOH HOH A . G 4 HOH 37 2037 2037 HOH HOH A . G 4 HOH 38 2038 2038 HOH HOH A . G 4 HOH 39 2039 2039 HOH HOH A . G 4 HOH 40 2040 2040 HOH HOH A . G 4 HOH 41 2041 2041 HOH HOH A . G 4 HOH 42 2042 2042 HOH HOH A . G 4 HOH 43 2043 2043 HOH HOH A . G 4 HOH 44 2044 2044 HOH HOH A . G 4 HOH 45 2045 2045 HOH HOH A . G 4 HOH 46 2046 2046 HOH HOH A . G 4 HOH 47 2047 2047 HOH HOH A . G 4 HOH 48 2048 2048 HOH HOH A . G 4 HOH 49 2049 2049 HOH HOH A . G 4 HOH 50 2050 2050 HOH HOH A . G 4 HOH 51 2051 2051 HOH HOH A . G 4 HOH 52 2052 2052 HOH HOH A . G 4 HOH 53 2053 2053 HOH HOH A . G 4 HOH 54 2054 2054 HOH HOH A . G 4 HOH 55 2055 2055 HOH HOH A . G 4 HOH 56 2056 2056 HOH HOH A . G 4 HOH 57 2057 2057 HOH HOH A . G 4 HOH 58 2058 2058 HOH HOH A . G 4 HOH 59 2059 2059 HOH HOH A . G 4 HOH 60 2060 2060 HOH HOH A . G 4 HOH 61 2061 2061 HOH HOH A . G 4 HOH 62 2062 2062 HOH HOH A . G 4 HOH 63 2063 2063 HOH HOH A . G 4 HOH 64 2064 2064 HOH HOH A . G 4 HOH 65 2065 2065 HOH HOH A . G 4 HOH 66 2066 2066 HOH HOH A . G 4 HOH 67 2067 2067 HOH HOH A . G 4 HOH 68 2068 2068 HOH HOH A . G 4 HOH 69 2069 2069 HOH HOH A . G 4 HOH 70 2070 2070 HOH HOH A . G 4 HOH 71 2071 2071 HOH HOH A . G 4 HOH 72 2072 2072 HOH HOH A . G 4 HOH 73 2073 2073 HOH HOH A . G 4 HOH 74 2074 2074 HOH HOH A . G 4 HOH 75 2075 2075 HOH HOH A . G 4 HOH 76 2076 2076 HOH HOH A . G 4 HOH 77 2077 2077 HOH HOH A . G 4 HOH 78 2078 2078 HOH HOH A . G 4 HOH 79 2079 2079 HOH HOH A . G 4 HOH 80 2080 2080 HOH HOH A . G 4 HOH 81 2081 2081 HOH HOH A . G 4 HOH 82 2082 2082 HOH HOH A . G 4 HOH 83 2083 2083 HOH HOH A . G 4 HOH 84 2084 2084 HOH HOH A . G 4 HOH 85 2085 2085 HOH HOH A . G 4 HOH 86 2086 2086 HOH HOH A . G 4 HOH 87 2087 2087 HOH HOH A . G 4 HOH 88 2088 2088 HOH HOH A . G 4 HOH 89 2089 2089 HOH HOH A . G 4 HOH 90 2090 2090 HOH HOH A . G 4 HOH 91 2091 2091 HOH HOH A . G 4 HOH 92 2092 2092 HOH HOH A . G 4 HOH 93 2093 2093 HOH HOH A . G 4 HOH 94 2094 2094 HOH HOH A . G 4 HOH 95 2095 2095 HOH HOH A . G 4 HOH 96 2096 2096 HOH HOH A . G 4 HOH 97 2097 2097 HOH HOH A . G 4 HOH 98 2098 2098 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-06-29 2 'Structure model' 1 1 2016-07-13 3 'Structure model' 1 2 2018-12-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Source and taxonomy' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' citation_author 3 3 'Structure model' entity 4 3 'Structure model' entity_src_gen 5 3 'Structure model' pdbx_entity_src_syn 6 3 'Structure model' struct_ref 7 3 'Structure model' struct_ref_seq # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_abbrev' 2 3 'Structure model' '_citation.journal_id_ISSN' 3 3 'Structure model' '_citation.page_last' 4 3 'Structure model' '_citation.pdbx_database_id_DOI' 5 3 'Structure model' '_citation.title' 6 3 'Structure model' '_citation_author.name' 7 3 'Structure model' '_entity.pdbx_description' 8 3 'Structure model' '_entity.src_method' 9 3 'Structure model' '_struct_ref.db_code' 10 3 'Structure model' '_struct_ref.db_name' 11 3 'Structure model' '_struct_ref.pdbx_align_begin' 12 3 'Structure model' '_struct_ref.pdbx_db_accession' 13 3 'Structure model' '_struct_ref.pdbx_seq_one_letter_code' 14 3 'Structure model' '_struct_ref_seq.db_align_beg' 15 3 'Structure model' '_struct_ref_seq.db_align_end' 16 3 'Structure model' '_struct_ref_seq.pdbx_db_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data reduction' . ? 1 Aimless 'data scaling' . ? 2 SHELX phasing . ? 3 PHASER phasing . ? 4 REFMAC refinement 5.8.0097 ? 5 # _pdbx_entry_details.entry_id 5AOS _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;CACODYLATE ION (CAC): FROM THE CRYSTALLISATION BUFFER GLYCEROL (GOL): FROM THE CRYOPROTECTANT ; _pdbx_entry_details.sequence_details 'TRUNCATED AT C-TERMINAL' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 490 ? ? -101.12 -97.27 2 1 LEU A 504 ? ? 56.74 -131.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 406 ? A MET 1 2 1 Y 1 A GLY 407 ? A GLY 2 3 1 Y 1 A ALA 408 ? A ALA 3 4 1 Y 1 A GLU 409 ? A GLU 4 5 1 Y 1 A GLU 410 ? A GLU 5 6 1 Y 1 A GLU 411 ? A GLU 6 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CACODYLATE ION' CAC 3 GLYCEROL GOL 4 water HOH #