HEADER TRANSFERASE 14-SEP-15 5AP7
TITLE NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO
TITLE 2 KINASE INHIBITOR DRUG RESISTANCE.
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MONOPOLAR SPINDLE KINASE 1;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 519-808;
COMPND 5 SYNONYM: PHOSPHOTYROSINE PICKED THREONINE-PROTEIN KINASE, PYT,
COMPND 6 MONOPOLAR SPINDLE KINASE 1;
COMPND 7 EC: 2.7.12.1;
COMPND 8 ENGINEERED: YES;
COMPND 9 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693;
SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 8 EXPRESSION_SYSTEM_VARIANT: AI
KEYWDS TRANSFERASE, MPS1, MITOSIS
EXPDTA X-RAY DIFFRACTION
AUTHOR M.D.GURDEN,I.M.WESTWOOD,A.FAISAL,S.NAUD,K.M.CHEUNG,C.MCANDREW,A.WOOD,
AUTHOR 2 J.SCHMITT,K.BOXALL,G.MAK,P.WORKMAN,R.BURKE,S.HOELDER,J.BLAGG,R.VAN
AUTHOR 3 MONTFORT,S.LINARDOPOULOS
REVDAT 2 10-JAN-24 5AP7 1 REMARK
REVDAT 1 23-SEP-15 5AP7 0
JRNL AUTH M.D.GURDEN,I.M.WESTWOOD,A.FAISAL,S.NAUD,K.J.CHEUNG,
JRNL AUTH 2 C.MCANDREW,A.WOOD,J.SCHMITT,K.BOXALL,G.MAK,P.WORKMAN,
JRNL AUTH 3 R.BURKE,S.HOELDER,J.BLAGG,R.L.M.VAN MONTFORT,S.LINARDOPOULOS
JRNL TITL NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE
JRNL TITL 2 CELLS TO KINASE INHIBITOR DRUG RESISTANCE.
JRNL REF CANCER RES. V. 75 3340 2015
JRNL REFN ISSN 0008-5472
JRNL PMID 26202014
JRNL DOI 10.1158/0008-5472.CAN-14-3272
REMARK 2
REMARK 2 RESOLUTION. 2.45 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.4
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.66
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2
REMARK 3 NUMBER OF REFLECTIONS : 17192
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.188
REMARK 3 R VALUE (WORKING SET) : 0.186
REMARK 3 FREE R VALUE : 0.234
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080
REMARK 3 FREE R VALUE TEST SET COUNT : 873
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 9
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.60
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.24
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2738
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2336
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2574
REMARK 3 BIN R VALUE (WORKING SET) : 0.2318
REMARK 3 BIN FREE R VALUE : 0.2602
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.99
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 164
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2060
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 73
REMARK 3 SOLVENT ATOMS : 41
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 73.78
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.00
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 7.13880
REMARK 3 B22 (A**2) : -2.72170
REMARK 3 B33 (A**2) : -4.41710
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.336
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.228
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.201
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.231
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.204
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 2182 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 2955 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 743 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 52 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 338 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 2182 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 285 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 2383 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.11
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.93
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.53
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 9
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: {A|509 - 544}
REMARK 3 ORIGIN FOR THE GROUP (A): 9.4734 -5.3428 -19.4139
REMARK 3 T TENSOR
REMARK 3 T11: -0.1292 T22: -0.3000
REMARK 3 T33: 0.2325 T12: 0.0201
REMARK 3 T13: 0.0290 T23: -0.1014
REMARK 3 L TENSOR
REMARK 3 L11: 5.5422 L22: 8.0596
REMARK 3 L33: 3.8883 L12: 2.7767
REMARK 3 L13: 0.5470 L23: 2.9013
REMARK 3 S TENSOR
REMARK 3 S11: -0.0296 S12: -0.2056 S13: 0.3244
REMARK 3 S21: 0.2156 S22: 0.1315 S23: -0.5282
REMARK 3 S31: -0.3195 S32: 0.3484 S33: -0.1019
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: {A|545 - 561}
REMARK 3 ORIGIN FOR THE GROUP (A): 10.5382 -11.9310 -22.5823
REMARK 3 T TENSOR
REMARK 3 T11: -0.0623 T22: -0.1331
REMARK 3 T33: 0.1348 T12: 0.0781
REMARK 3 T13: -0.0533 T23: -0.1491
REMARK 3 L TENSOR
REMARK 3 L11: 3.2967 L22: 3.2200
REMARK 3 L33: 0.1552 L12: 1.4959
REMARK 3 L13: -2.9104 L23: 2.7993
REMARK 3 S TENSOR
REMARK 3 S11: 0.0590 S12: -0.0183 S13: 0.0055
REMARK 3 S21: -0.0233 S22: 0.2540 S23: -0.3774
REMARK 3 S31: -0.2480 S32: 0.5026 S33: -0.3130
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: {A|562 - 578}
REMARK 3 ORIGIN FOR THE GROUP (A): 8.9558 -26.6313 -26.2555
REMARK 3 T TENSOR
REMARK 3 T11: -0.1569 T22: -0.1217
REMARK 3 T33: 0.2105 T12: 0.0254
REMARK 3 T13: 0.0155 T23: -0.1002
REMARK 3 L TENSOR
REMARK 3 L11: 4.1998 L22: 0.9783
REMARK 3 L33: 0.4170 L12: 0.8888
REMARK 3 L13: -2.8379 L23: 2.5043
REMARK 3 S TENSOR
REMARK 3 S11: -0.0154 S12: 0.1239 S13: -0.0908
REMARK 3 S21: -0.0895 S22: 0.0650 S23: 0.0423
REMARK 3 S31: 0.0378 S32: 0.0685 S33: -0.0496
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: {A|579 - 620}
REMARK 3 ORIGIN FOR THE GROUP (A): -0.4069 -14.9283 -22.1653
REMARK 3 T TENSOR
REMARK 3 T11: -0.0877 T22: -0.2203
REMARK 3 T33: 0.0564 T12: 0.0663
REMARK 3 T13: -0.0541 T23: 0.0077
REMARK 3 L TENSOR
REMARK 3 L11: 6.6155 L22: 5.2574
REMARK 3 L33: 4.3364 L12: 0.9818
REMARK 3 L13: -0.9975 L23: 2.7597
REMARK 3 S TENSOR
REMARK 3 S11: 0.0619 S12: 0.1852 S13: 0.1704
REMARK 3 S21: 0.1342 S22: 0.1208 S23: -0.4277
REMARK 3 S31: -0.0556 S32: -0.1543 S33: -0.1827
REMARK 3
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: {A|621 - 641}
REMARK 3 ORIGIN FOR THE GROUP (A): -13.6418 -23.5467 -22.7977
REMARK 3 T TENSOR
REMARK 3 T11: -0.1849 T22: -0.1081
REMARK 3 T33: 0.1378 T12: 0.0138
REMARK 3 T13: -0.0417 T23: -0.0784
REMARK 3 L TENSOR
REMARK 3 L11: 5.6007 L22: 1.2681
REMARK 3 L33: 1.1513 L12: 1.8591
REMARK 3 L13: 1.6931 L23: -1.7846
REMARK 3 S TENSOR
REMARK 3 S11: -0.0353 S12: 0.1623 S13: -0.1071
REMARK 3 S21: 0.1046 S22: 0.0622 S23: 0.0384
REMARK 3 S31: -0.0906 S32: -0.1542 S33: -0.0268
REMARK 3
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: {A|642 - 662}
REMARK 3 ORIGIN FOR THE GROUP (A): -5.7323 -20.9889 -19.2934
REMARK 3 T TENSOR
REMARK 3 T11: -0.1377 T22: -0.0659
REMARK 3 T33: 0.0619 T12: 0.0206
REMARK 3 T13: 0.0033 T23: -0.0722
REMARK 3 L TENSOR
REMARK 3 L11: 7.1601 L22: 2.6102
REMARK 3 L33: 4.5269 L12: 2.8908
REMARK 3 L13: -2.7713 L23: 1.7631
REMARK 3 S TENSOR
REMARK 3 S11: 0.0729 S12: -0.1129 S13: -0.0377
REMARK 3 S21: 0.0452 S22: -0.0097 S23: -0.0079
REMARK 3 S31: -0.1244 S32: -0.0541 S33: -0.0632
REMARK 3
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: {A|663 - 712}
REMARK 3 ORIGIN FOR THE GROUP (A): -0.1671 -30.4382 -12.3537
REMARK 3 T TENSOR
REMARK 3 T11: -0.1511 T22: -0.0262
REMARK 3 T33: 0.1969 T12: -0.0621
REMARK 3 T13: -0.0936 T23: 0.0455
REMARK 3 L TENSOR
REMARK 3 L11: 0.4823 L22: 1.0425
REMARK 3 L33: 1.3982 L12: -1.4808
REMARK 3 L13: -2.6897 L23: -1.0712
REMARK 3 S TENSOR
REMARK 3 S11: 0.0401 S12: -0.3921 S13: -0.2106
REMARK 3 S21: 0.0996 S22: 0.0454 S23: -0.0843
REMARK 3 S31: 0.0799 S32: 0.2224 S33: -0.0854
REMARK 3
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: {A|713 - 781}
REMARK 3 ORIGIN FOR THE GROUP (A): -15.6511 -31.8058 -7.9045
REMARK 3 T TENSOR
REMARK 3 T11: -0.1310 T22: -0.0625
REMARK 3 T33: 0.0780 T12: -0.1206
REMARK 3 T13: 0.0424 T23: 0.0578
REMARK 3 L TENSOR
REMARK 3 L11: 3.6836 L22: 1.1503
REMARK 3 L33: 3.6069 L12: -0.6945
REMARK 3 L13: -0.5446 L23: 0.6841
REMARK 3 S TENSOR
REMARK 3 S11: -0.0513 S12: -0.5442 S13: -0.5442
REMARK 3 S21: 0.5424 S22: -0.1568 S23: 0.1527
REMARK 3 S31: 0.4794 S32: -0.4935 S33: 0.2081
REMARK 3
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: {A|782 - 794}
REMARK 3 ORIGIN FOR THE GROUP (A): -22.3453 -28.7183 -23.7106
REMARK 3 T TENSOR
REMARK 3 T11: -0.2275 T22: -0.0829
REMARK 3 T33: 0.2735 T12: -0.0471
REMARK 3 T13: 0.0192 T23: -0.1520
REMARK 3 L TENSOR
REMARK 3 L11: 0.2078 L22: 0.6729
REMARK 3 L33: 0.2972 L12: 1.9030
REMARK 3 L13: 0.9891 L23: 2.6455
REMARK 3 S TENSOR
REMARK 3 S11: -0.0171 S12: -0.0374 S13: -0.0690
REMARK 3 S21: -0.0038 S22: -0.0802 S23: 0.0408
REMARK 3 S31: -0.1624 S32: -0.1400 S33: 0.0973
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5AP7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-SEP-15.
REMARK 100 THE DEPOSITION ID IS D_1290065031.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 29-SEP-12
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 8.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I04-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9173
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17195
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450
REMARK 200 RESOLUTION RANGE LOW (A) : 41.660
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5
REMARK 200 DATA REDUNDANCY : 5.200
REMARK 200 R MERGE (I) : 0.07000
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.4000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9
REMARK 200 DATA REDUNDANCY IN SHELL : 5.40
REMARK 200 R MERGE FOR SHELL (I) : 1.46000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.100
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 4C4J
REMARK 200
REMARK 200 REMARK: NONE
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 61.28
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, PH 8.0, 0.2M MGCL2, 20% (W/
REMARK 280 V) PEG6000
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z
REMARK 290 3555 -X,Y,-Z
REMARK 290 4555 X,-Y,-Z
REMARK 290 5555 X+1/2,Y+1/2,Z+1/2
REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.36000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.98500
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.08000
REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.36000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.98500
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.08000
REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.36000
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.98500
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.08000
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.36000
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.98500
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.08000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 400
REMARK 400 COMPOUND
REMARK 400 ENGINEERED RESIDUE IN CHAIN A, CYS 604 TO TRP
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 496
REMARK 465 HIS A 497
REMARK 465 HIS A 498
REMARK 465 HIS A 499
REMARK 465 HIS A 500
REMARK 465 HIS A 501
REMARK 465 HIS A 502
REMARK 465 SER A 503
REMARK 465 SER A 504
REMARK 465 GLY A 505
REMARK 465 VAL A 506
REMARK 465 ASP A 507
REMARK 465 LEU A 508
REMARK 465 ASP A 674
REMARK 465 THR A 675
REMARK 465 THR A 676
REMARK 465 SER A 677
REMARK 465 VAL A 678
REMARK 465 VAL A 679
REMARK 465 LYS A 680
REMARK 465 ASP A 681
REMARK 465 SER A 682
REMARK 465 GLN A 683
REMARK 465 MET A 698
REMARK 465 SER A 699
REMARK 465 SER A 700
REMARK 465 SER A 701
REMARK 465 ARG A 702
REMARK 465 GLU A 703
REMARK 465 ASN A 704
REMARK 465 GLY A 705
REMARK 465 LYS A 706
REMARK 465 SER A 707
REMARK 465 LYS A 708
REMARK 465 SER A 709
REMARK 465 LYS A 710
REMARK 465 THR A 795
REMARK 465 HIS A 796
REMARK 465 PRO A 797
REMARK 465 VAL A 798
REMARK 465 ASN A 799
REMARK 465 GLN A 800
REMARK 465 MET A 801
REMARK 465 ALA A 802
REMARK 465 LYS A 803
REMARK 465 GLY A 804
REMARK 465 THR A 805
REMARK 465 THR A 806
REMARK 465 GLU A 807
REMARK 465 GLU A 808
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 THR A 510 OG1 CG2
REMARK 470 GLU A 511 CG CD OE1 OE2
REMARK 470 ASN A 512 CG OD1 ND2
REMARK 470 PHE A 515 CG CD1 CD2 CE1 CE2 CZ
REMARK 470 GLN A 516 CG CD OE1 NE2
REMARK 470 ARG A 523 CD NE CZ NH1 NH2
REMARK 470 LYS A 538 CE NZ
REMARK 470 LYS A 546 CG CD CE NZ
REMARK 470 GLU A 559 CG CD OE1 OE2
REMARK 470 LYS A 615 CE NZ
REMARK 470 LYS A 616 CD CE NZ
REMARK 470 LYS A 617 CG CD CE NZ
REMARK 470 SER A 618 OG
REMARK 470 TRP A 622 CG CD1 CD2 NE1 CE2 CE3 CZ2
REMARK 470 TRP A 622 CZ3 CH2
REMARK 470 GLN A 670 CG CD OE1 NE2
REMARK 470 MET A 671 CG SD CE
REMARK 470 GLN A 672 CG CD OE1 NE2
REMARK 470 VAL A 684 CG1 CG2
REMARK 470 LYS A 696 CD CE NZ
REMARK 470 ASP A 697 CG OD1 OD2
REMARK 470 ILE A 711 CG1 CG2 CD1
REMARK 470 ILE A 738 CG1 CG2 CD1
REMARK 470 GLU A 753 CG CD OE1 OE2
REMARK 470 GLU A 755 CG CD OE1 OE2
REMARK 470 LYS A 777 CG CD CE NZ
REMARK 470 GLN A 778 CG CD OE1 NE2
REMARK 470 GLN A 794 CG CD OE1 NE2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 PHE A 515 4.17 59.49
REMARK 500 ASP A 647 42.32 -151.83
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SVE A 1795
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1796
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1797
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1798
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1799
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1800
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1801
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5AP0 RELATED DB: PDB
REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO
REMARK 900 KINASE INHIBITOR DRUG RESISTANCE.
REMARK 900 RELATED ID: 5AP1 RELATED DB: PDB
REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO
REMARK 900 KINASE INHIBITOR DRUG RESISTANCE.
REMARK 900 RELATED ID: 5AP2 RELATED DB: PDB
REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO
REMARK 900 KINASE INHIBITOR DRUG RESISTANCE.
REMARK 900 RELATED ID: 5AP3 RELATED DB: PDB
REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO
REMARK 900 KINASE INHIBITOR DRUG RESISTANCE.
REMARK 900 RELATED ID: 5AP4 RELATED DB: PDB
REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO
REMARK 900 KINASE INHIBITOR DRUG RESISTANCE.
REMARK 900 RELATED ID: 5AP5 RELATED DB: PDB
REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO
REMARK 900 KINASE INHIBITOR DRUG RESISTANCE.
REMARK 900 RELATED ID: 5AP6 RELATED DB: PDB
REMARK 900 NATURALLY OCCURRING MUTATIONS IN THE MPS1 GENE PREDISPOSE CELLS TO
REMARK 900 KINASE INHIBITOR DRUG RESISTANCE.
REMARK 999
REMARK 999 SEQUENCE
REMARK 999 THE SEQUENCE INCLUDING HEXAHISTIDINE TAG IS AS DESCRIBED
REMARK 999 IN NAT. CHEM. BIOL. 2010, 6, 259-368 WITH AN ADDITIONAL
REMARK 999 MUTATION C604W
DBREF 5AP7 A 519 808 UNP P33981 TTK_HUMAN 519 808
SEQADV 5AP7 MET A 496 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 HIS A 497 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 HIS A 498 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 HIS A 499 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 HIS A 500 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 HIS A 501 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 HIS A 502 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 SER A 503 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 SER A 504 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 GLY A 505 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 VAL A 506 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 ASP A 507 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 LEU A 508 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 GLY A 509 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 THR A 510 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 GLU A 511 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 ASN A 512 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 LEU A 513 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 TYR A 514 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 PHE A 515 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 GLN A 516 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 SER A 517 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 MET A 518 UNP P33981 EXPRESSION TAG
SEQADV 5AP7 TRP A 604 UNP P33981 CYS 604 ENGINEERED MUTATION
SEQRES 1 A 313 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU
SEQRES 2 A 313 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER VAL LYS
SEQRES 3 A 313 GLY ARG ILE TYR SER ILE LEU LYS GLN ILE GLY SER GLY
SEQRES 4 A 313 GLY SER SER LYS VAL PHE GLN VAL LEU ASN GLU LYS LYS
SEQRES 5 A 313 GLN ILE TYR ALA ILE LYS TYR VAL ASN LEU GLU GLU ALA
SEQRES 6 A 313 ASP ASN GLN THR LEU ASP SER TYR ARG ASN GLU ILE ALA
SEQRES 7 A 313 TYR LEU ASN LYS LEU GLN GLN HIS SER ASP LYS ILE ILE
SEQRES 8 A 313 ARG LEU TYR ASP TYR GLU ILE THR ASP GLN TYR ILE TYR
SEQRES 9 A 313 MET VAL MET GLU TRP GLY ASN ILE ASP LEU ASN SER TRP
SEQRES 10 A 313 LEU LYS LYS LYS LYS SER ILE ASP PRO TRP GLU ARG LYS
SEQRES 11 A 313 SER TYR TRP LYS ASN MET LEU GLU ALA VAL HIS THR ILE
SEQRES 12 A 313 HIS GLN HIS GLY ILE VAL HIS SER ASP LEU LYS PRO ALA
SEQRES 13 A 313 ASN PHE LEU ILE VAL ASP GLY MET LEU LYS LEU ILE ASP
SEQRES 14 A 313 PHE GLY ILE ALA ASN GLN MET GLN PRO ASP THR THR SER
SEQRES 15 A 313 VAL VAL LYS ASP SER GLN VAL GLY THR VAL ASN TYR MET
SEQRES 16 A 313 PRO PRO GLU ALA ILE LYS ASP MET SER SER SER ARG GLU
SEQRES 17 A 313 ASN GLY LYS SER LYS SER LYS ILE SER PRO LYS SER ASP
SEQRES 18 A 313 VAL TRP SER LEU GLY CYS ILE LEU TYR TYR MET THR TYR
SEQRES 19 A 313 GLY LYS THR PRO PHE GLN GLN ILE ILE ASN GLN ILE SER
SEQRES 20 A 313 LYS LEU HIS ALA ILE ILE ASP PRO ASN HIS GLU ILE GLU
SEQRES 21 A 313 PHE PRO ASP ILE PRO GLU LYS ASP LEU GLN ASP VAL LEU
SEQRES 22 A 313 LYS CYS CYS LEU LYS ARG ASP PRO LYS GLN ARG ILE SER
SEQRES 23 A 313 ILE PRO GLU LEU LEU ALA HIS PRO TYR VAL GLN ILE GLN
SEQRES 24 A 313 THR HIS PRO VAL ASN GLN MET ALA LYS GLY THR THR GLU
SEQRES 25 A 313 GLU
HET SVE A1795 49
HET EDO A1796 4
HET EDO A1797 4
HET EDO A1798 4
HET EDO A1799 4
HET EDO A1800 4
HET DMS A1801 4
HETNAM SVE N-(2,6-DIETHYLPHENYL)-1-METHYL-8-({4-[(1-
HETNAM 2 SVE METHYLPIPERIDIN-4-YL)CARBAMOYL]-2-(TRIFLUOROMETHOXY)
HETNAM 3 SVE PHENYL}AMINO)-4,5-DIHYDRO-1H-PYRAZOLO[4,3-
HETNAM 4 SVE H]QUINAZOLINE-3-CARBOXAMIDE
HETNAM EDO 1,2-ETHANEDIOL
HETNAM DMS DIMETHYL SULFOXIDE
HETSYN EDO ETHYLENE GLYCOL
FORMUL 2 SVE C35 H39 F3 N8 O3
FORMUL 3 EDO 5(C2 H6 O2)
FORMUL 8 DMS C2 H6 O S
FORMUL 9 HOH *41(H2 O)
HELIX 1 1 ASP A 561 GLN A 579 1 19
HELIX 2 2 GLN A 580 SER A 582 5 3
HELIX 3 3 LEU A 609 LYS A 616 1 8
HELIX 4 4 ASP A 620 GLN A 640 1 21
HELIX 5 5 LYS A 649 ALA A 651 5 3
HELIX 6 6 PRO A 691 ASP A 697 1 7
HELIX 7 7 SER A 712 GLY A 730 1 19
HELIX 8 8 ASN A 739 ASP A 749 1 11
HELIX 9 9 GLU A 761 LEU A 772 1 12
HELIX 10 10 SER A 781 LEU A 786 1 6
HELIX 11 11 HIS A 788 ILE A 793 1 6
SHEET 1 AA 6 SER A 517 VAL A 520 0
SHEET 2 AA 6 ARG A 523 GLY A 534 -1 O ARG A 523 N VAL A 520
SHEET 3 AA 6 SER A 537 ASN A 544 -1 O SER A 537 N GLY A 534
SHEET 4 AA 6 ILE A 549 ASN A 556 -1 O TYR A 550 N VAL A 542
SHEET 5 AA 6 TYR A 597 MET A 602 -1 O ILE A 598 N VAL A 555
SHEET 6 AA 6 LEU A 588 ILE A 593 -1 N TYR A 589 O VAL A 601
SHEET 1 AB 3 ILE A 607 ASP A 608 0
SHEET 2 AB 3 PHE A 653 VAL A 656 -1 N ILE A 655 O ILE A 607
SHEET 3 AB 3 MET A 659 LEU A 662 -1 O MET A 659 N VAL A 656
SITE 1 AC1 18 GLY A 509 ILE A 531 SER A 537 VAL A 539
SITE 2 AC1 18 GLN A 541 ALA A 551 LYS A 553 ILE A 586
SITE 3 AC1 18 MET A 602 GLU A 603 TRP A 604 GLY A 605
SITE 4 AC1 18 ASN A 606 ASP A 608 SER A 611 ALA A 651
SITE 5 AC1 18 LEU A 654 ILE A 663
SITE 1 AC2 3 LYS A 553 GLU A 571 ILE A 663
SITE 1 AC3 3 ASP A 566 LEU A 786 GLN A 792
SITE 1 AC4 5 ASP A 595 HIS A 636 HIS A 639 ILE A 782
SITE 2 AC4 5 HOH A2040
SITE 1 AC5 5 PRO A 760 GLU A 761 LYS A 762 ASP A 763
SITE 2 AC5 5 HOH A2037
SITE 1 AC6 4 LYS A 521 ASP A 590 TYR A 591 GLU A 784
SITE 1 AC7 3 TYR A 525 ASN A 544 TYR A 550
CRYST1 70.720 111.970 116.160 90.00 90.00 90.00 I 2 2 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014140 0.000000 0.000000 0.00000
SCALE2 0.000000 0.008931 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008609 0.00000