HEADER DNA BINDING PROTEIN 17-SEP-15 5APZ TITLE THERMOSINUS CARBOXYDIVORANS NOR1 TCAR0761 RESIDUES 68-101 AND 191-211 TITLE 2 FUSED TO GCN4 ADAPTORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENERAL CONTROL PROTEIN GCN4, NOR1 TCAR0761, GENERAL COMPND 3 CONTROL PROTEIN GCN4; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RESIDUES 250-279,68-101,191-211,250-279; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE, THERMOSINUS SOURCE 3 CARBOXYDIVORANS NOR1; SOURCE 4 ORGANISM_TAXID: 4932, 401526; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA BINDING PROTEIN, ALPHA/BETA COILED COIL, BETA LAYER, TRIMER EXPDTA X-RAY DIFFRACTION AUTHOR M.D.HARTMANN,S.DEISS,A.N.LUPAS,B.HERNANDEZ ALVAREZ REVDAT 3 10-JAN-24 5APZ 1 REMARK REVDAT 2 15-MAR-17 5APZ 1 SOURCE JRNL REVDAT 1 27-JAN-16 5APZ 0 JRNL AUTH M.D.HARTMANN,C.T.MENDLER,J.BASSLER,I.KARAMICHALI, JRNL AUTH 2 O.RIDDERBUSCH,A.N.LUPAS,B.HERNANDEZ ALVAREZ JRNL TITL ALPHA / BETA COILED COILS. JRNL REF ELIFE V. 5 2016 JRNL REFN ESSN 2050-084X JRNL PMID 26771248 JRNL DOI 10.7554/ELIFE.11861 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 18113 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 993 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1293 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.3170 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 888 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 104 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.05000 REMARK 3 B22 (A**2) : 1.05000 REMARK 3 B33 (A**2) : -3.42000 REMARK 3 B12 (A**2) : 0.53000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.077 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.204 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 916 ; 0.020 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 950 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1232 ; 1.918 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2202 ; 0.879 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 118 ; 4.737 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 39 ;40.390 ;27.179 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 207 ;15.987 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 7.829 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 149 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1002 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 169 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 455 ; 2.274 ; 2.674 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 454 ; 2.265 ; 2.671 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 569 ; 2.880 ; 4.002 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 461 ; 4.669 ; 3.375 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 7 REMARK 3 ORIGIN FOR THE GROUP (A): -6.3276 24.1842 127.7372 REMARK 3 T TENSOR REMARK 3 T11: 0.1325 T22: 0.1259 REMARK 3 T33: 0.0922 T12: -0.0153 REMARK 3 T13: 0.0131 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 6.6090 L22: 4.5232 REMARK 3 L33: 1.2246 L12: 0.0026 REMARK 3 L13: -1.3584 L23: -1.3130 REMARK 3 S TENSOR REMARK 3 S11: 0.1131 S12: -0.1854 S13: 0.1357 REMARK 3 S21: 0.2739 S22: -0.0617 S23: 0.0431 REMARK 3 S31: -0.1676 S32: 0.0152 S33: -0.0514 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 14 REMARK 3 ORIGIN FOR THE GROUP (A): -5.7396 20.5594 119.4100 REMARK 3 T TENSOR REMARK 3 T11: 0.0672 T22: 0.0942 REMARK 3 T33: 0.0630 T12: -0.0132 REMARK 3 T13: -0.0083 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 0.3758 L22: 1.9441 REMARK 3 L33: 12.1282 L12: 0.5154 REMARK 3 L13: -0.1820 L23: -0.7172 REMARK 3 S TENSOR REMARK 3 S11: -0.0190 S12: -0.0110 S13: 0.1214 REMARK 3 S21: 0.1562 S22: -0.0208 S23: 0.2037 REMARK 3 S31: -0.1316 S32: -0.0304 S33: 0.0398 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 32 REMARK 3 ORIGIN FOR THE GROUP (A): -3.3336 16.4057 101.2718 REMARK 3 T TENSOR REMARK 3 T11: 0.0193 T22: 0.0354 REMARK 3 T33: 0.0388 T12: -0.0155 REMARK 3 T13: -0.0052 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.4640 L22: 0.8085 REMARK 3 L33: 10.0287 L12: -0.4041 REMARK 3 L13: -1.3246 L23: -0.1938 REMARK 3 S TENSOR REMARK 3 S11: 0.0114 S12: -0.0309 S13: 0.0333 REMARK 3 S21: -0.0101 S22: -0.0102 S23: -0.0270 REMARK 3 S31: 0.0625 S32: 0.0442 S33: -0.0012 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 69 REMARK 3 ORIGIN FOR THE GROUP (A): 0.5931 21.4130 59.1197 REMARK 3 T TENSOR REMARK 3 T11: 0.0326 T22: 0.0407 REMARK 3 T33: 0.0308 T12: -0.0182 REMARK 3 T13: 0.0006 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 0.7041 L22: 0.5915 REMARK 3 L33: 7.2909 L12: -0.1425 REMARK 3 L13: -0.2257 L23: 1.0790 REMARK 3 S TENSOR REMARK 3 S11: -0.0302 S12: -0.1100 S13: -0.0780 REMARK 3 S21: 0.0845 S22: -0.0809 S23: -0.0649 REMARK 3 S31: 0.3036 S32: -0.2836 S33: 0.1110 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 70 A 100 REMARK 3 ORIGIN FOR THE GROUP (A): 3.7073 17.7979 5.9464 REMARK 3 T TENSOR REMARK 3 T11: 0.0177 T22: 0.0248 REMARK 3 T33: 0.0438 T12: 0.0095 REMARK 3 T13: 0.0007 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.1839 L22: 0.6665 REMARK 3 L33: 11.7491 L12: 0.2892 REMARK 3 L13: -1.4389 L23: -2.0804 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: 0.0036 S13: 0.0150 REMARK 3 S21: 0.0184 S22: -0.0055 S23: 0.0400 REMARK 3 S31: -0.0259 S32: -0.0812 S33: 0.0037 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 101 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 5.2534 24.4924 -22.7728 REMARK 3 T TENSOR REMARK 3 T11: 0.0013 T22: 0.0251 REMARK 3 T33: 0.0156 T12: -0.0032 REMARK 3 T13: 0.0002 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 2.7152 L22: 4.5636 REMARK 3 L33: 10.0161 L12: 0.3919 REMARK 3 L13: -1.2783 L23: 1.8406 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: 0.0938 S13: 0.0143 REMARK 3 S21: -0.0658 S22: 0.0299 S23: -0.1442 REMARK 3 S31: -0.0280 S32: 0.1415 S33: -0.0164 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 109 A 999 REMARK 3 ORIGIN FOR THE GROUP (A): 2.4788 26.8956 -31.8061 REMARK 3 T TENSOR REMARK 3 T11: 0.1542 T22: 0.1682 REMARK 3 T33: 0.0626 T12: 0.0373 REMARK 3 T13: -0.0309 T23: 0.0595 REMARK 3 L TENSOR REMARK 3 L11: 8.7923 L22: 7.2477 REMARK 3 L33: 12.6347 L12: -4.7448 REMARK 3 L13: 10.3900 L23: -5.7386 REMARK 3 S TENSOR REMARK 3 S11: 0.1356 S12: 0.5741 S13: 0.3649 REMARK 3 S21: -0.8000 S22: -0.4924 S23: 0.1339 REMARK 3 S31: 0.2221 S32: 0.4864 S33: 0.3567 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 5APZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1290065080. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19111 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 32.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.690 REMARK 200 R MERGE (I) : 0.03000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.65 REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.230 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2WPQ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRI-SODIUM CITRATE PH 4.0, 30 REMARK 280 %(V/V) MPD REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 89.57500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 89.57500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.57500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -146.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 -18.96000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 32.83968 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 -0.866025 0.000000 18.96000 REMARK 350 BIOMT2 3 0.866025 -0.500000 0.000000 32.83968 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 HIS A 115 REMARK 465 HIS A 116 REMARK 465 HIS A 117 REMARK 465 HIS A 118 REMARK 465 HIS A 119 REMARK 465 HIS A 120 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 109 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2004 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A2031 DISTANCE = 5.99 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5APP RELATED DB: PDB REMARK 900 ACTINOBACILLUS ACTINOMYCETEMCOMITANS OMP100 RESIDUES 133-198 FUSED REMARK 900 TO GCN4 ADAPTORS REMARK 900 RELATED ID: 5APQ RELATED DB: PDB REMARK 900 SEQUENCE IENKAD INSERTED BETWEEN GCN4 ADAPTORS - STRUCTURE A6 REMARK 900 RELATED ID: 5APS RELATED DB: PDB REMARK 900 SEQUENCE IENKKAD INSERTED BETWEEN GCN4 ADAPTORS - STRUCTURE A7 REMARK 900 RELATED ID: 5APT RELATED DB: PDB REMARK 900 SEQUENCE IENKADKAD INSERTED BETWEEN GCN4 ADAPTORS - STRUCTURE A9 REMARK 900 RELATED ID: 5APU RELATED DB: PDB REMARK 900 SEQUENCE IANKEDKAD INSERTED BETWEEN GCN4 ADAPTORS - STRUCTURE A9B REMARK 900 BLACK REMARK 900 RELATED ID: 5APV RELATED DB: PDB REMARK 900 SEQUENCE IANKEDKAD INSERTED BETWEEN GCN4 ADAPTORS - STRUCTURE A9B REMARK 900 GREY REMARK 900 RELATED ID: 5APW RELATED DB: PDB REMARK 900 SEQUENCE MATKDD INSERTED BETWEEN GCN4 ADAPTORS - STRUCTURE T6 REMARK 900 RELATED ID: 5APX RELATED DB: PDB REMARK 900 SEQUENCE MATKDDIAN INSERTED BETWEEN GCN4 ADAPTORS - STRUCTURE T9(6) REMARK 900 RELATED ID: 5APY RELATED DB: PDB REMARK 900 SEQUENCE MATKDDIAN INSERTED BETWEEN GCN4 ADAPTORS - STRUCTURE T9(9) DBREF 5APZ A 1 28 UNP P03069 GCN4_YEAST 250 279 DBREF 5APZ A 29 62 UNP A1HT30 A1HT30_9FIRM 68 101 DBREF 5APZ A 63 82 UNP A1HT30 A1HT30_9FIRM 192 211 DBREF 5APZ A 83 112 UNP P03069 GCN4_YEAST 250 279 SEQADV 5APZ MET A 6 UNP P03069 ASP 255 ENGINEERED MUTATION SEQADV 5APZ VAL A 15 UNP P03069 ASN 264 ENGINEERED MUTATION SEQADV 5APZ TRP A 88 UNP P03069 ASP 255 ENGINEERED MUTATION SEQADV 5APZ VAL A 97 UNP P03069 ASN 264 ENGINEERED MUTATION SEQADV 5APZ SER A 113 UNP P03069 EXPRESSION TAG SEQADV 5APZ GLY A 114 UNP P03069 EXPRESSION TAG SEQADV 5APZ HIS A 115 UNP P03069 EXPRESSION TAG SEQADV 5APZ HIS A 116 UNP P03069 EXPRESSION TAG SEQADV 5APZ HIS A 117 UNP P03069 EXPRESSION TAG SEQADV 5APZ HIS A 118 UNP P03069 EXPRESSION TAG SEQADV 5APZ HIS A 119 UNP P03069 EXPRESSION TAG SEQADV 5APZ HIS A 120 UNP P03069 EXPRESSION TAG SEQRES 1 A 120 MET LYS GLN LEU GLU MET LYS VAL GLU GLU LEU LEU SER SEQRES 2 A 120 LYS VAL TYR HIS LEU GLU ASN GLU VAL ALA ARG LEU LYS SEQRES 3 A 120 LYS LEU ILE THR LEU MET GLN ALA ASN MET ALA THR LYS SEQRES 4 A 120 ASP ASP LEU ALA ARG MET ALA THR LYS ASP ASP ILE ALA SEQRES 5 A 120 ASN MET ALA THR LYS ASP ASP ILE ALA ASN MET ALA THR SEQRES 6 A 120 LYS ASP ASP ILE ALA LYS LEU ASP VAL LYS ILE GLU ASN SEQRES 7 A 120 LEU ASN THR LYS MET LYS GLN LEU GLU TRP LYS VAL GLU SEQRES 8 A 120 GLU LEU LEU SER LYS VAL TYR HIS LEU GLU ASN GLU VAL SEQRES 9 A 120 ALA ARG LEU LYS LYS LEU VAL GLY SER GLY HIS HIS HIS SEQRES 10 A 120 HIS HIS HIS FORMUL 2 HOH *104(H2 O) HELIX 1 1 GLN A 3 MET A 36 1 34 HELIX 2 2 THR A 38 ARG A 44 1 7 HELIX 3 3 LYS A 48 ALA A 52 5 5 HELIX 4 4 THR A 65 GLY A 112 1 48 CRYST1 37.920 37.920 179.150 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026371 0.015225 0.000000 0.00000 SCALE2 0.000000 0.030451 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005582 0.00000