data_5AQ0 # _entry.id 5AQ0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5AQ0 PDBE EBI-65081 WWPDB D_1290065081 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5AQ0 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-09-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gallego, P.' 1 'Garcia-Pardo, J.' 2 'Lorenzo, J.' 3 'Aviles, F.X.' 4 'Ventura, S.' 5 'Reverter, D.' 6 # _citation.id primary _citation.title 'The Structure of the Ttldomain of the Human Carboxypeptidase D' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Gallego, P.' 1 primary 'Garcia-Pardo, J.' 2 primary 'Berenguer, E.' 3 primary 'Lorenzo, J.' 4 primary 'Aviles, F.X.' 5 primary 'Ventura, S.' 6 primary 'Reverter, D.' 7 # _cell.entry_id 5AQ0 _cell.length_a 39.773 _cell.length_b 46.051 _cell.length_c 42.730 _cell.angle_alpha 90.00 _cell.angle_beta 90.18 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AQ0 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CARBOXYPEPTIDASE D' 8757.919 2 3.4.17.22 ? 'TRANSTHYRETIN-LIKE DOMAIN, UNP 383-461' ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 249 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'METALLOCARBOXYPEPTIDASE D, GP180, METALLOCARBOXYPEPTIDASE D , GP180, HUMAN CARBOXYPEPTIDASE D, HUMAN CARBOXYPEPTIDASE D' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGVKGFVKDSITGSGLENATISVAGINHNITTGRFGDFYRLLVPGTYNLTVVLTGYMPLTVTNVVVKEGPATEVDFSLRP HH ; _entity_poly.pdbx_seq_one_letter_code_can ;SGVKGFVKDSITGSGLENATISVAGINHNITTGRFGDFYRLLVPGTYNLTVVLTGYMPLTVTNVVVKEGPATEVDFSLRP HH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 VAL n 1 4 LYS n 1 5 GLY n 1 6 PHE n 1 7 VAL n 1 8 LYS n 1 9 ASP n 1 10 SER n 1 11 ILE n 1 12 THR n 1 13 GLY n 1 14 SER n 1 15 GLY n 1 16 LEU n 1 17 GLU n 1 18 ASN n 1 19 ALA n 1 20 THR n 1 21 ILE n 1 22 SER n 1 23 VAL n 1 24 ALA n 1 25 GLY n 1 26 ILE n 1 27 ASN n 1 28 HIS n 1 29 ASN n 1 30 ILE n 1 31 THR n 1 32 THR n 1 33 GLY n 1 34 ARG n 1 35 PHE n 1 36 GLY n 1 37 ASP n 1 38 PHE n 1 39 TYR n 1 40 ARG n 1 41 LEU n 1 42 LEU n 1 43 VAL n 1 44 PRO n 1 45 GLY n 1 46 THR n 1 47 TYR n 1 48 ASN n 1 49 LEU n 1 50 THR n 1 51 VAL n 1 52 VAL n 1 53 LEU n 1 54 THR n 1 55 GLY n 1 56 TYR n 1 57 MET n 1 58 PRO n 1 59 LEU n 1 60 THR n 1 61 VAL n 1 62 THR n 1 63 ASN n 1 64 VAL n 1 65 VAL n 1 66 VAL n 1 67 LYS n 1 68 GLU n 1 69 GLY n 1 70 PRO n 1 71 ALA n 1 72 THR n 1 73 GLU n 1 74 VAL n 1 75 ASP n 1 76 PHE n 1 77 SER n 1 78 LEU n 1 79 ARG n 1 80 PRO n 1 81 HIS n 1 82 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PET28 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CBPD_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession O75976 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5AQ0 A 2 ? 80 ? O75976 383 ? 461 ? 383 461 2 1 5AQ0 B 2 ? 80 ? O75976 383 ? 461 ? 383 461 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5AQ0 SER A 1 ? UNP O75976 ? ? 'expression tag' 382 1 1 5AQ0 HIS A 81 ? UNP O75976 ? ? 'expression tag' 462 2 1 5AQ0 HIS A 82 ? UNP O75976 ? ? 'expression tag' 463 3 2 5AQ0 SER B 1 ? UNP O75976 ? ? 'expression tag' 382 4 2 5AQ0 HIS B 81 ? UNP O75976 ? ? 'expression tag' 462 5 2 5AQ0 HIS B 82 ? UNP O75976 ? ? 'expression tag' 463 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5AQ0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.22 _exptl_crystal.density_percent_sol 44.67 _exptl_crystal.description NONE # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979491 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALBA BEAMLINE XALOC' _diffrn_source.pdbx_synchrotron_site ALBA _diffrn_source.pdbx_synchrotron_beamline XALOC _diffrn_source.pdbx_wavelength 0.979491 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5AQ0 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 42.73 _reflns.d_resolution_high 0.95 _reflns.number_obs 92883 _reflns.number_all ? _reflns.percent_possible_obs 95.5 _reflns.pdbx_Rmerge_I_obs 0.03 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.5 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 0.95 _reflns_shell.d_res_low 1.00 _reflns_shell.percent_possible_all 81.3 _reflns_shell.Rmerge_I_obs 0.46 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.70 _reflns_shell.pdbx_redundancy 2.0 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5AQ0 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 88253 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.73 _refine.ls_d_res_high 0.95 _refine.ls_percent_reflns_obs 95.47 _refine.ls_R_factor_obs 0.15392 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15282 _refine.ls_R_factor_R_free 0.17514 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 4610 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.974 _refine.correlation_coeff_Fo_to_Fc_free 0.968 _refine.B_iso_mean 13.807 _refine.aniso_B[1][1] 0.07 _refine.aniso_B[2][2] -0.14 _refine.aniso_B[3][3] 0.07 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.51 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.022 _refine.pdbx_overall_ESU_R_Free 0.023 _refine.overall_SU_ML 0.016 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.627 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1224 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 249 _refine_hist.number_atoms_total 1479 _refine_hist.d_res_high 0.95 _refine_hist.d_res_low 42.73 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.029 0.022 ? 1365 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.364 1.961 ? 1871 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.376 5.000 ? 183 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.183 23.200 ? 50 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.376 15.000 ? 214 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.856 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.419 0.200 ? 222 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.015 0.021 ? 1035 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.198 1.500 ? 871 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.216 2.000 ? 1436 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 4.860 3.000 ? 494 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 6.930 4.500 ? 435 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.599 3.000 ? 1365 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 0.949 _refine_ls_shell.d_res_low 0.974 _refine_ls_shell.number_reflns_R_work 4862 _refine_ls_shell.R_factor_R_work 0.313 _refine_ls_shell.percent_reflns_obs 71.36 _refine_ls_shell.R_factor_R_free 0.324 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 236 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5AQ0 _struct.title 'The structure of the Transthyretin-like domain of the first catalytic domain of the HUMAN Carboxypeptidase D' _struct.pdbx_descriptor 'CARBOXYPEPTIDASE D (E.C.3.4.17.22)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5AQ0 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, MAN CARBOXYPEPTIDASE D, TTL, TRANSTHYRETIN-LIKE DOMAIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 2 ? AC ? 2 ? AD ? 4 ? BA ? 2 ? BB ? 2 ? BC ? 2 ? BD ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? parallel AC 1 2 ? parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel BA 1 2 ? anti-parallel BB 1 2 ? parallel BC 1 2 ? parallel BD 1 2 ? anti-parallel BD 2 3 ? anti-parallel BD 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ASP A 37 ? LEU A 41 ? ASP A 418 LEU A 422 AA 2 GLY A 2 ? ASP A 9 ? GLY A 383 ASP A 390 AB 1 THR A 72 ? GLU A 73 ? THR A 453 GLU A 454 AB 2 GLY A 2 ? ASP A 9 ? GLY A 383 ASP A 390 AC 1 PHE A 76 ? LEU A 78 ? PHE A 457 LEU A 459 AC 2 GLY A 2 ? ASP A 9 ? GLY A 383 ASP A 390 AD 1 ILE A 30 ? THR A 31 ? ILE A 411 THR A 412 AD 2 THR A 20 ? VAL A 23 ? THR A 401 VAL A 404 AD 3 GLY A 45 ? VAL A 52 ? GLY A 426 VAL A 433 AD 4 LEU A 59 ? VAL A 66 ? LEU A 440 VAL A 447 BA 1 ASP B 37 ? LEU B 41 ? ASP B 418 LEU B 422 BA 2 GLY B 2 ? ASP B 9 ? GLY B 383 ASP B 390 BB 1 THR B 72 ? GLU B 73 ? THR B 453 GLU B 454 BB 2 GLY B 2 ? ASP B 9 ? GLY B 383 ASP B 390 BC 1 PHE B 76 ? LEU B 78 ? PHE B 457 LEU B 459 BC 2 GLY B 2 ? ASP B 9 ? GLY B 383 ASP B 390 BD 1 ILE B 26 ? THR B 31 ? ILE B 407 THR B 412 BD 2 THR B 20 ? VAL B 23 ? THR B 401 VAL B 404 BD 3 GLY B 45 ? VAL B 52 ? GLY B 426 VAL B 433 BD 4 LEU B 59 ? VAL B 66 ? LEU B 440 VAL B 447 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ARG A 40 ? N ARG A 421 O VAL A 3 ? O VAL A 384 AB 1 2 N THR A 72 ? N THR A 453 O GLY A 2 ? O GLY A 383 AC 1 2 N PHE A 76 ? N PHE A 457 O PHE A 6 ? O PHE A 387 AD 1 2 N ILE A 30 ? N ILE A 411 O ILE A 21 ? O ILE A 402 AD 2 3 N SER A 22 ? N SER A 403 O THR A 50 ? O THR A 431 AD 3 4 N VAL A 51 ? N VAL A 432 O LEU A 59 ? O LEU A 440 BA 1 2 N ARG B 40 ? N ARG B 421 O VAL B 3 ? O VAL B 384 BB 1 2 N THR B 72 ? N THR B 453 O GLY B 2 ? O GLY B 383 BC 1 2 N PHE B 76 ? N PHE B 457 O PHE B 6 ? O PHE B 387 BD 1 2 N ILE B 30 ? N ILE B 411 O ILE B 21 ? O ILE B 402 BD 2 3 N SER B 22 ? N SER B 403 O THR B 50 ? O THR B 431 BD 3 4 N VAL B 51 ? N VAL B 432 O LEU B 59 ? O LEU B 440 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE GOL B 1464' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 PHE A 38 ? PHE A 419 . ? 1_555 ? 2 AC1 10 HOH D . ? HOH A 2009 . ? 1_555 ? 3 AC1 10 HOH D . ? HOH A 2010 . ? 1_555 ? 4 AC1 10 HOH D . ? HOH A 2051 . ? 1_555 ? 5 AC1 10 HOH D . ? HOH A 2053 . ? 1_555 ? 6 AC1 10 LEU B 53 ? LEU B 434 . ? 1_555 ? 7 AC1 10 GLY B 55 ? GLY B 436 . ? 1_555 ? 8 AC1 10 TYR B 56 ? TYR B 437 . ? 1_555 ? 9 AC1 10 GLU B 68 ? GLU B 449 . ? 1_455 ? 10 AC1 10 HIS B 81 ? HIS B 462 . ? 1_555 ? # _database_PDB_matrix.entry_id 5AQ0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5AQ0 _atom_sites.fract_transf_matrix[1][1] 0.025143 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000079 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021715 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023403 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.text 'THR A 412 C-BETA WRONG HAND THR B 412 C-BETA WRONG HAND' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 382 382 SER SER A . n A 1 2 GLY 2 383 383 GLY GLY A . n A 1 3 VAL 3 384 384 VAL VAL A . n A 1 4 LYS 4 385 385 LYS LYS A . n A 1 5 GLY 5 386 386 GLY GLY A . n A 1 6 PHE 6 387 387 PHE PHE A . n A 1 7 VAL 7 388 388 VAL VAL A . n A 1 8 LYS 8 389 389 LYS LYS A . n A 1 9 ASP 9 390 390 ASP ASP A . n A 1 10 SER 10 391 391 SER SER A . n A 1 11 ILE 11 392 392 ILE ILE A . n A 1 12 THR 12 393 393 THR THR A . n A 1 13 GLY 13 394 394 GLY GLY A . n A 1 14 SER 14 395 395 SER SER A . n A 1 15 GLY 15 396 396 GLY GLY A . n A 1 16 LEU 16 397 397 LEU LEU A . n A 1 17 GLU 17 398 398 GLU GLU A . n A 1 18 ASN 18 399 399 ASN ASN A . n A 1 19 ALA 19 400 400 ALA ALA A . n A 1 20 THR 20 401 401 THR THR A . n A 1 21 ILE 21 402 402 ILE ILE A . n A 1 22 SER 22 403 403 SER SER A . n A 1 23 VAL 23 404 404 VAL VAL A . n A 1 24 ALA 24 405 405 ALA ALA A . n A 1 25 GLY 25 406 406 GLY GLY A . n A 1 26 ILE 26 407 407 ILE ILE A . n A 1 27 ASN 27 408 408 ASN ASN A . n A 1 28 HIS 28 409 409 HIS HIS A . n A 1 29 ASN 29 410 410 ASN ASN A . n A 1 30 ILE 30 411 411 ILE ILE A . n A 1 31 THR 31 412 412 THR THR A . n A 1 32 THR 32 413 413 THR THR A . n A 1 33 GLY 33 414 414 GLY GLY A . n A 1 34 ARG 34 415 415 ARG ARG A . n A 1 35 PHE 35 416 416 PHE PHE A . n A 1 36 GLY 36 417 417 GLY GLY A . n A 1 37 ASP 37 418 418 ASP ASP A . n A 1 38 PHE 38 419 419 PHE PHE A . n A 1 39 TYR 39 420 420 TYR TYR A . n A 1 40 ARG 40 421 421 ARG ARG A . n A 1 41 LEU 41 422 422 LEU LEU A . n A 1 42 LEU 42 423 423 LEU LEU A . n A 1 43 VAL 43 424 424 VAL VAL A . n A 1 44 PRO 44 425 425 PRO PRO A . n A 1 45 GLY 45 426 426 GLY GLY A . n A 1 46 THR 46 427 427 THR THR A . n A 1 47 TYR 47 428 428 TYR TYR A . n A 1 48 ASN 48 429 429 ASN ASN A . n A 1 49 LEU 49 430 430 LEU LEU A . n A 1 50 THR 50 431 431 THR THR A . n A 1 51 VAL 51 432 432 VAL VAL A . n A 1 52 VAL 52 433 433 VAL VAL A . n A 1 53 LEU 53 434 434 LEU LEU A . n A 1 54 THR 54 435 435 THR THR A . n A 1 55 GLY 55 436 436 GLY GLY A . n A 1 56 TYR 56 437 437 TYR TYR A . n A 1 57 MET 57 438 438 MET MET A . n A 1 58 PRO 58 439 439 PRO PRO A . n A 1 59 LEU 59 440 440 LEU LEU A . n A 1 60 THR 60 441 441 THR THR A . n A 1 61 VAL 61 442 442 VAL VAL A . n A 1 62 THR 62 443 443 THR THR A . n A 1 63 ASN 63 444 444 ASN ASN A . n A 1 64 VAL 64 445 445 VAL VAL A . n A 1 65 VAL 65 446 446 VAL VAL A . n A 1 66 VAL 66 447 447 VAL VAL A . n A 1 67 LYS 67 448 448 LYS LYS A . n A 1 68 GLU 68 449 449 GLU GLU A . n A 1 69 GLY 69 450 450 GLY GLY A . n A 1 70 PRO 70 451 451 PRO PRO A . n A 1 71 ALA 71 452 452 ALA ALA A . n A 1 72 THR 72 453 453 THR THR A . n A 1 73 GLU 73 454 454 GLU GLU A . n A 1 74 VAL 74 455 455 VAL VAL A . n A 1 75 ASP 75 456 456 ASP ASP A . n A 1 76 PHE 76 457 457 PHE PHE A . n A 1 77 SER 77 458 458 SER SER A . n A 1 78 LEU 78 459 459 LEU LEU A . n A 1 79 ARG 79 460 460 ARG ARG A . n A 1 80 PRO 80 461 461 PRO PRO A . n A 1 81 HIS 81 462 462 HIS HIS A . n A 1 82 HIS 82 463 ? ? ? A . n B 1 1 SER 1 382 382 SER SER B . n B 1 2 GLY 2 383 383 GLY GLY B . n B 1 3 VAL 3 384 384 VAL VAL B . n B 1 4 LYS 4 385 385 LYS LYS B . n B 1 5 GLY 5 386 386 GLY GLY B . n B 1 6 PHE 6 387 387 PHE PHE B . n B 1 7 VAL 7 388 388 VAL VAL B . n B 1 8 LYS 8 389 389 LYS LYS B . n B 1 9 ASP 9 390 390 ASP ASP B . n B 1 10 SER 10 391 391 SER SER B . n B 1 11 ILE 11 392 392 ILE ILE B . n B 1 12 THR 12 393 393 THR THR B . n B 1 13 GLY 13 394 394 GLY GLY B . n B 1 14 SER 14 395 395 SER SER B . n B 1 15 GLY 15 396 396 GLY GLY B . n B 1 16 LEU 16 397 397 LEU LEU B . n B 1 17 GLU 17 398 398 GLU GLU B . n B 1 18 ASN 18 399 399 ASN ASN B . n B 1 19 ALA 19 400 400 ALA ALA B . n B 1 20 THR 20 401 401 THR THR B . n B 1 21 ILE 21 402 402 ILE ILE B . n B 1 22 SER 22 403 403 SER SER B . n B 1 23 VAL 23 404 404 VAL VAL B . n B 1 24 ALA 24 405 405 ALA ALA B . n B 1 25 GLY 25 406 406 GLY GLY B . n B 1 26 ILE 26 407 407 ILE ILE B . n B 1 27 ASN 27 408 408 ASN ASN B . n B 1 28 HIS 28 409 409 HIS HIS B . n B 1 29 ASN 29 410 410 ASN ASN B . n B 1 30 ILE 30 411 411 ILE ILE B . n B 1 31 THR 31 412 412 THR THR B . n B 1 32 THR 32 413 413 THR THR B . n B 1 33 GLY 33 414 414 GLY GLY B . n B 1 34 ARG 34 415 415 ARG ARG B . n B 1 35 PHE 35 416 416 PHE PHE B . n B 1 36 GLY 36 417 417 GLY GLY B . n B 1 37 ASP 37 418 418 ASP ASP B . n B 1 38 PHE 38 419 419 PHE PHE B . n B 1 39 TYR 39 420 420 TYR TYR B . n B 1 40 ARG 40 421 421 ARG ARG B . n B 1 41 LEU 41 422 422 LEU LEU B . n B 1 42 LEU 42 423 423 LEU LEU B . n B 1 43 VAL 43 424 424 VAL VAL B . n B 1 44 PRO 44 425 425 PRO PRO B . n B 1 45 GLY 45 426 426 GLY GLY B . n B 1 46 THR 46 427 427 THR THR B . n B 1 47 TYR 47 428 428 TYR TYR B . n B 1 48 ASN 48 429 429 ASN ASN B . n B 1 49 LEU 49 430 430 LEU LEU B . n B 1 50 THR 50 431 431 THR THR B . n B 1 51 VAL 51 432 432 VAL VAL B . n B 1 52 VAL 52 433 433 VAL VAL B . n B 1 53 LEU 53 434 434 LEU LEU B . n B 1 54 THR 54 435 435 THR THR B . n B 1 55 GLY 55 436 436 GLY GLY B . n B 1 56 TYR 56 437 437 TYR TYR B . n B 1 57 MET 57 438 438 MET MET B . n B 1 58 PRO 58 439 439 PRO PRO B . n B 1 59 LEU 59 440 440 LEU LEU B . n B 1 60 THR 60 441 441 THR THR B . n B 1 61 VAL 61 442 442 VAL VAL B . n B 1 62 THR 62 443 443 THR THR B . n B 1 63 ASN 63 444 444 ASN ASN B . n B 1 64 VAL 64 445 445 VAL VAL B . n B 1 65 VAL 65 446 446 VAL VAL B . n B 1 66 VAL 66 447 447 VAL VAL B . n B 1 67 LYS 67 448 448 LYS LYS B . n B 1 68 GLU 68 449 449 GLU GLU B . n B 1 69 GLY 69 450 450 GLY GLY B . n B 1 70 PRO 70 451 451 PRO PRO B . n B 1 71 ALA 71 452 452 ALA ALA B . n B 1 72 THR 72 453 453 THR THR B . n B 1 73 GLU 73 454 454 GLU GLU B . n B 1 74 VAL 74 455 455 VAL VAL B . n B 1 75 ASP 75 456 456 ASP ASP B . n B 1 76 PHE 76 457 457 PHE PHE B . n B 1 77 SER 77 458 458 SER SER B . n B 1 78 LEU 78 459 459 LEU LEU B . n B 1 79 ARG 79 460 460 ARG ARG B . n B 1 80 PRO 80 461 461 PRO PRO B . n B 1 81 HIS 81 462 462 HIS HIS B . n B 1 82 HIS 82 463 463 HIS HIS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 1464 1464 GOL GOL B . D 3 HOH 1 2001 2001 HOH HOH A . D 3 HOH 2 2002 2002 HOH HOH A . D 3 HOH 3 2003 2003 HOH HOH A . D 3 HOH 4 2004 2004 HOH HOH A . D 3 HOH 5 2005 2005 HOH HOH A . D 3 HOH 6 2006 2006 HOH HOH A . D 3 HOH 7 2007 2007 HOH HOH A . D 3 HOH 8 2008 2008 HOH HOH A . D 3 HOH 9 2009 2009 HOH HOH A . D 3 HOH 10 2010 2010 HOH HOH A . D 3 HOH 11 2011 2011 HOH HOH A . D 3 HOH 12 2012 2012 HOH HOH A . D 3 HOH 13 2013 2013 HOH HOH A . D 3 HOH 14 2014 2014 HOH HOH A . D 3 HOH 15 2015 2015 HOH HOH A . D 3 HOH 16 2016 2016 HOH HOH A . D 3 HOH 17 2017 2017 HOH HOH A . D 3 HOH 18 2018 2018 HOH HOH A . D 3 HOH 19 2019 2019 HOH HOH A . D 3 HOH 20 2020 2020 HOH HOH A . D 3 HOH 21 2021 2021 HOH HOH A . D 3 HOH 22 2022 2022 HOH HOH A . D 3 HOH 23 2023 2023 HOH HOH A . D 3 HOH 24 2024 2024 HOH HOH A . D 3 HOH 25 2025 2025 HOH HOH A . D 3 HOH 26 2026 2026 HOH HOH A . D 3 HOH 27 2027 2027 HOH HOH A . D 3 HOH 28 2028 2028 HOH HOH A . D 3 HOH 29 2029 2029 HOH HOH A . D 3 HOH 30 2030 2030 HOH HOH A . D 3 HOH 31 2031 2031 HOH HOH A . D 3 HOH 32 2032 2032 HOH HOH A . D 3 HOH 33 2033 2033 HOH HOH A . D 3 HOH 34 2034 2034 HOH HOH A . D 3 HOH 35 2035 2035 HOH HOH A . D 3 HOH 36 2036 2036 HOH HOH A . D 3 HOH 37 2037 2037 HOH HOH A . D 3 HOH 38 2038 2038 HOH HOH A . D 3 HOH 39 2039 2039 HOH HOH A . D 3 HOH 40 2040 2040 HOH HOH A . D 3 HOH 41 2041 2041 HOH HOH A . D 3 HOH 42 2042 2042 HOH HOH A . D 3 HOH 43 2043 2043 HOH HOH A . D 3 HOH 44 2044 2044 HOH HOH A . D 3 HOH 45 2045 2045 HOH HOH A . D 3 HOH 46 2046 2046 HOH HOH A . D 3 HOH 47 2047 2047 HOH HOH A . D 3 HOH 48 2048 2048 HOH HOH A . D 3 HOH 49 2049 2049 HOH HOH A . D 3 HOH 50 2050 2050 HOH HOH A . D 3 HOH 51 2051 2051 HOH HOH A . D 3 HOH 52 2052 2052 HOH HOH A . D 3 HOH 53 2053 2053 HOH HOH A . D 3 HOH 54 2054 2054 HOH HOH A . D 3 HOH 55 2055 2055 HOH HOH A . D 3 HOH 56 2056 2056 HOH HOH A . D 3 HOH 57 2057 2057 HOH HOH A . D 3 HOH 58 2058 2058 HOH HOH A . D 3 HOH 59 2059 2059 HOH HOH A . D 3 HOH 60 2060 2060 HOH HOH A . D 3 HOH 61 2061 2061 HOH HOH A . D 3 HOH 62 2062 2062 HOH HOH A . D 3 HOH 63 2063 2063 HOH HOH A . D 3 HOH 64 2064 2064 HOH HOH A . D 3 HOH 65 2065 2065 HOH HOH A . D 3 HOH 66 2066 2066 HOH HOH A . D 3 HOH 67 2067 2067 HOH HOH A . D 3 HOH 68 2068 2068 HOH HOH A . D 3 HOH 69 2069 2069 HOH HOH A . D 3 HOH 70 2070 2070 HOH HOH A . D 3 HOH 71 2071 2071 HOH HOH A . D 3 HOH 72 2072 2072 HOH HOH A . D 3 HOH 73 2073 2073 HOH HOH A . D 3 HOH 74 2074 2074 HOH HOH A . D 3 HOH 75 2075 2075 HOH HOH A . D 3 HOH 76 2076 2076 HOH HOH A . D 3 HOH 77 2077 2077 HOH HOH A . D 3 HOH 78 2078 2078 HOH HOH A . D 3 HOH 79 2079 2079 HOH HOH A . D 3 HOH 80 2080 2080 HOH HOH A . D 3 HOH 81 2081 2081 HOH HOH A . D 3 HOH 82 2082 2082 HOH HOH A . D 3 HOH 83 2083 2083 HOH HOH A . D 3 HOH 84 2084 2084 HOH HOH A . D 3 HOH 85 2085 2085 HOH HOH A . D 3 HOH 86 2086 2086 HOH HOH A . D 3 HOH 87 2087 2087 HOH HOH A . D 3 HOH 88 2088 2088 HOH HOH A . D 3 HOH 89 2089 2089 HOH HOH A . D 3 HOH 90 2090 2090 HOH HOH A . D 3 HOH 91 2091 2091 HOH HOH A . D 3 HOH 92 2092 2092 HOH HOH A . D 3 HOH 93 2093 2093 HOH HOH A . D 3 HOH 94 2094 2094 HOH HOH A . D 3 HOH 95 2095 2095 HOH HOH A . D 3 HOH 96 2096 2096 HOH HOH A . D 3 HOH 97 2097 2097 HOH HOH A . D 3 HOH 98 2098 2098 HOH HOH A . D 3 HOH 99 2099 2099 HOH HOH A . D 3 HOH 100 2100 2100 HOH HOH A . D 3 HOH 101 2101 2101 HOH HOH A . D 3 HOH 102 2102 2102 HOH HOH A . D 3 HOH 103 2103 2103 HOH HOH A . D 3 HOH 104 2104 2104 HOH HOH A . D 3 HOH 105 2105 2105 HOH HOH A . D 3 HOH 106 2106 2106 HOH HOH A . D 3 HOH 107 2107 2107 HOH HOH A . D 3 HOH 108 2108 2108 HOH HOH A . D 3 HOH 109 2109 2109 HOH HOH A . D 3 HOH 110 2110 2110 HOH HOH A . D 3 HOH 111 2111 2111 HOH HOH A . D 3 HOH 112 2112 2112 HOH HOH A . D 3 HOH 113 2113 2113 HOH HOH A . D 3 HOH 114 2114 2114 HOH HOH A . D 3 HOH 115 2115 2115 HOH HOH A . D 3 HOH 116 2116 2116 HOH HOH A . D 3 HOH 117 2117 2117 HOH HOH A . D 3 HOH 118 2118 2118 HOH HOH A . E 3 HOH 1 2001 2001 HOH HOH B . E 3 HOH 2 2002 2002 HOH HOH B . E 3 HOH 3 2003 2003 HOH HOH B . E 3 HOH 4 2004 2004 HOH HOH B . E 3 HOH 5 2005 2005 HOH HOH B . E 3 HOH 6 2006 2006 HOH HOH B . E 3 HOH 7 2007 2007 HOH HOH B . E 3 HOH 8 2008 2008 HOH HOH B . E 3 HOH 9 2009 2009 HOH HOH B . E 3 HOH 10 2010 2010 HOH HOH B . E 3 HOH 11 2011 2011 HOH HOH B . E 3 HOH 12 2012 2012 HOH HOH B . E 3 HOH 13 2013 2013 HOH HOH B . E 3 HOH 14 2014 2014 HOH HOH B . E 3 HOH 15 2015 2015 HOH HOH B . E 3 HOH 16 2016 2016 HOH HOH B . E 3 HOH 17 2017 2017 HOH HOH B . E 3 HOH 18 2018 2018 HOH HOH B . E 3 HOH 19 2019 2019 HOH HOH B . E 3 HOH 20 2020 2020 HOH HOH B . E 3 HOH 21 2021 2021 HOH HOH B . E 3 HOH 22 2022 2022 HOH HOH B . E 3 HOH 23 2023 2023 HOH HOH B . E 3 HOH 24 2024 2024 HOH HOH B . E 3 HOH 25 2025 2025 HOH HOH B . E 3 HOH 26 2026 2026 HOH HOH B . E 3 HOH 27 2027 2027 HOH HOH B . E 3 HOH 28 2028 2028 HOH HOH B . E 3 HOH 29 2029 2029 HOH HOH B . E 3 HOH 30 2030 2030 HOH HOH B . E 3 HOH 31 2031 2031 HOH HOH B . E 3 HOH 32 2032 2032 HOH HOH B . E 3 HOH 33 2033 2033 HOH HOH B . E 3 HOH 34 2034 2034 HOH HOH B . E 3 HOH 35 2035 2035 HOH HOH B . E 3 HOH 36 2036 2036 HOH HOH B . E 3 HOH 37 2037 2037 HOH HOH B . E 3 HOH 38 2038 2038 HOH HOH B . E 3 HOH 39 2039 2039 HOH HOH B . E 3 HOH 40 2040 2040 HOH HOH B . E 3 HOH 41 2041 2041 HOH HOH B . E 3 HOH 42 2042 2042 HOH HOH B . E 3 HOH 43 2043 2043 HOH HOH B . E 3 HOH 44 2044 2044 HOH HOH B . E 3 HOH 45 2045 2045 HOH HOH B . E 3 HOH 46 2046 2046 HOH HOH B . E 3 HOH 47 2047 2047 HOH HOH B . E 3 HOH 48 2048 2048 HOH HOH B . E 3 HOH 49 2049 2049 HOH HOH B . E 3 HOH 50 2050 2050 HOH HOH B . E 3 HOH 51 2051 2051 HOH HOH B . E 3 HOH 52 2052 2052 HOH HOH B . E 3 HOH 53 2053 2053 HOH HOH B . E 3 HOH 54 2054 2054 HOH HOH B . E 3 HOH 55 2055 2055 HOH HOH B . E 3 HOH 56 2056 2056 HOH HOH B . E 3 HOH 57 2057 2057 HOH HOH B . E 3 HOH 58 2058 2058 HOH HOH B . E 3 HOH 59 2059 2059 HOH HOH B . E 3 HOH 60 2060 2060 HOH HOH B . E 3 HOH 61 2061 2061 HOH HOH B . E 3 HOH 62 2062 2062 HOH HOH B . E 3 HOH 63 2063 2063 HOH HOH B . E 3 HOH 64 2064 2064 HOH HOH B . E 3 HOH 65 2065 2065 HOH HOH B . E 3 HOH 66 2066 2066 HOH HOH B . E 3 HOH 67 2067 2067 HOH HOH B . E 3 HOH 68 2068 2068 HOH HOH B . E 3 HOH 69 2069 2069 HOH HOH B . E 3 HOH 70 2070 2070 HOH HOH B . E 3 HOH 71 2071 2071 HOH HOH B . E 3 HOH 72 2072 2072 HOH HOH B . E 3 HOH 73 2073 2073 HOH HOH B . E 3 HOH 74 2074 2074 HOH HOH B . E 3 HOH 75 2075 2075 HOH HOH B . E 3 HOH 76 2076 2076 HOH HOH B . E 3 HOH 77 2077 2077 HOH HOH B . E 3 HOH 78 2078 2078 HOH HOH B . E 3 HOH 79 2079 2079 HOH HOH B . E 3 HOH 80 2080 2080 HOH HOH B . E 3 HOH 81 2081 2081 HOH HOH B . E 3 HOH 82 2082 2082 HOH HOH B . E 3 HOH 83 2083 2083 HOH HOH B . E 3 HOH 84 2084 2084 HOH HOH B . E 3 HOH 85 2085 2085 HOH HOH B . E 3 HOH 86 2086 2086 HOH HOH B . E 3 HOH 87 2087 2087 HOH HOH B . E 3 HOH 88 2088 2088 HOH HOH B . E 3 HOH 89 2089 2089 HOH HOH B . E 3 HOH 90 2090 2090 HOH HOH B . E 3 HOH 91 2091 2091 HOH HOH B . E 3 HOH 92 2092 2092 HOH HOH B . E 3 HOH 93 2093 2093 HOH HOH B . E 3 HOH 94 2094 2094 HOH HOH B . E 3 HOH 95 2095 2095 HOH HOH B . E 3 HOH 96 2096 2096 HOH HOH B . E 3 HOH 97 2097 2097 HOH HOH B . E 3 HOH 98 2098 2098 HOH HOH B . E 3 HOH 99 2099 2099 HOH HOH B . E 3 HOH 100 2100 2100 HOH HOH B . E 3 HOH 101 2101 2101 HOH HOH B . E 3 HOH 102 2102 2102 HOH HOH B . E 3 HOH 103 2103 2103 HOH HOH B . E 3 HOH 104 2104 2104 HOH HOH B . E 3 HOH 105 2105 2105 HOH HOH B . E 3 HOH 106 2106 2106 HOH HOH B . E 3 HOH 107 2107 2107 HOH HOH B . E 3 HOH 108 2108 2108 HOH HOH B . E 3 HOH 109 2109 2109 HOH HOH B . E 3 HOH 110 2110 2110 HOH HOH B . E 3 HOH 111 2111 2111 HOH HOH B . E 3 HOH 112 2112 2112 HOH HOH B . E 3 HOH 113 2113 2113 HOH HOH B . E 3 HOH 114 2114 2114 HOH HOH B . E 3 HOH 115 2115 2115 HOH HOH B . E 3 HOH 116 2116 2116 HOH HOH B . E 3 HOH 117 2117 2117 HOH HOH B . E 3 HOH 118 2118 2118 HOH HOH B . E 3 HOH 119 2119 2119 HOH HOH B . E 3 HOH 120 2120 2120 HOH HOH B . E 3 HOH 121 2121 2121 HOH HOH B . E 3 HOH 122 2122 2122 HOH HOH B . E 3 HOH 123 2123 2123 HOH HOH B . E 3 HOH 124 2124 2124 HOH HOH B . E 3 HOH 125 2125 2125 HOH HOH B . E 3 HOH 126 2126 2126 HOH HOH B . E 3 HOH 127 2127 2127 HOH HOH B . E 3 HOH 128 2128 2128 HOH HOH B . E 3 HOH 129 2129 2129 HOH HOH B . E 3 HOH 130 2130 2130 HOH HOH B . E 3 HOH 131 2131 2131 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1020 ? 1 MORE -8.0 ? 1 'SSA (A^2)' 9010 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2016-09-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -4.4650 0.9434 5.4132 0.0190 0.0045 0.0133 0.0018 -0.0014 0.0028 0.4146 0.3836 0.5276 -0.0391 -0.2205 0.3387 -0.0195 -0.0035 -0.0154 0.0096 -0.0218 0.0316 0.0345 -0.0042 0.0413 'X-RAY DIFFRACTION' 2 ? refined 11.0776 0.5729 22.3022 0.0059 0.0178 0.0111 -0.0052 -0.0018 -0.0068 0.7831 0.5318 0.4187 0.2078 -0.5010 -0.0701 -0.0034 -0.0408 -0.0011 0.0014 0.0236 -0.0537 -0.0024 0.0372 -0.0202 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 383 ? ? A 461 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 383 ? ? B 461 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 XDS 'data reduction' . ? 2 CCP4I 'data scaling' . ? 3 MOLREP phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CE B LYS 448 ? B O B HOH 2109 ? ? 1.90 2 1 NZ B LYS 448 ? B O B HOH 2109 ? ? 2.12 3 1 NE2 A HIS 462 ? A O A HOH 2072 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A ASP 418 ? ? CG A ASP 418 ? ? 1.355 1.513 -0.158 0.021 N 2 1 CG A GLU 449 ? ? CD A GLU 449 ? ? 1.616 1.515 0.101 0.015 N 3 1 CA B VAL 447 ? ? C B VAL 447 ? ? 1.708 1.525 0.183 0.026 N 4 1 C B VAL 447 ? ? O B VAL 447 ? ? 1.072 1.229 -0.157 0.019 N 5 1 C B LYS 448 ? B O B LYS 448 ? B 1.407 1.229 0.178 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 415 ? ? CZ A ARG 415 ? ? NH2 A ARG 415 ? ? 117.24 120.30 -3.06 0.50 N 2 1 CB A ASP 418 ? ? CG A ASP 418 ? ? OD1 A ASP 418 ? ? 127.87 118.30 9.57 0.90 N 3 1 NE A ARG 421 ? A CZ A ARG 421 ? A NH2 A ARG 421 ? A 116.53 120.30 -3.77 0.50 N 4 1 CB B TYR 420 ? ? CG B TYR 420 ? ? CD1 B TYR 420 ? ? 125.83 121.00 4.83 0.60 N 5 1 NE B ARG 421 ? ? CZ B ARG 421 ? ? NH2 B ARG 421 ? ? 117.29 120.30 -3.01 0.50 N 6 1 CA B THR 443 ? ? C B THR 443 ? ? N B ASN 444 ? B 131.01 117.20 13.81 2.20 Y 7 1 O B THR 443 ? ? C B THR 443 ? ? N B ASN 444 ? A 132.69 122.70 9.99 1.60 Y 8 1 O B THR 443 ? ? C B THR 443 ? ? N B ASN 444 ? B 107.81 122.70 -14.89 1.60 Y 9 1 NE B ARG 460 ? ? CZ B ARG 460 ? ? NH1 B ARG 460 ? ? 123.51 120.30 3.21 0.50 N 10 1 NE B ARG 460 ? ? CZ B ARG 460 ? ? NH2 B ARG 460 ? ? 116.84 120.30 -3.46 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 409 ? ? 81.07 97.79 2 1 HIS B 409 ? ? -162.93 106.40 3 1 ASN B 444 ? B 79.06 36.68 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CB ? A THR 412 ? 'WRONG HAND' . 2 1 CB ? B THR 412 ? 'WRONG HAND' . # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2120 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.19 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id HIS _pdbx_unobs_or_zero_occ_residues.auth_seq_id 463 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id HIS _pdbx_unobs_or_zero_occ_residues.label_seq_id 82 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH #