HEADER CELL ADHESION 16-JUL-15 5AX6 TITLE THE CRYSTAL STRUCTURE OF COFB, THE MINOR PILIN SUBUNIT OF CFA/III FROM TITLE 2 HUMAN ENTEROTOXIGENIC ESCHERICHIA COLI. COMPND MOL_ID: 1; COMPND 2 MOLECULE: COFB; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 34-523; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: COFB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MINOR PILIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR K.KAWAHARA,K.OKI,F.FUKAKSUA,T.MARUNO,Y.KOBAYASHI,M.DAISUKE, AUTHOR 2 T.TANIGUCHI,T.HONDA,T.IIDA,S.NAKAMURA,T.OHKUBO REVDAT 3 26-FEB-20 5AX6 1 JRNL REMARK REVDAT 2 20-APR-16 5AX6 1 JRNL REVDAT 1 09-MAR-16 5AX6 0 JRNL AUTH K.KAWAHARA,H.OKI,S.FUKAKUSA,T.YOSHIDA,T.IMAI,T.MARUNO, JRNL AUTH 2 Y.KOBAYASHI,D.MOTOOKA,T.IIDA,T.OHKUBO,S.NAKAMURA JRNL TITL HOMO-TRIMERIC STRUCTURE OF THE TYPE IVB MINOR PILIN COFB JRNL TITL 2 SUGGESTS MECHANISM OF CFA/III PILUS ASSEMBLY IN HUMAN JRNL TITL 3 ENTEROTOXIGENIC ESCHERICHIA COLI JRNL REF J.MOL.BIOL. V. 428 1209 2016 JRNL REFN ESSN 1089-8638 JRNL PMID 26876601 JRNL DOI 10.1016/J.JMB.2016.02.003 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 117927 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.250 REMARK 3 FREE R VALUE TEST SET COUNT : 3830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.6594 - 5.6349 0.87 3748 126 0.1985 0.2182 REMARK 3 2 5.6349 - 4.4744 0.98 4198 138 0.1475 0.1438 REMARK 3 3 4.4744 - 3.9093 0.97 4172 143 0.1397 0.1368 REMARK 3 4 3.9093 - 3.5521 0.98 4214 143 0.1574 0.1674 REMARK 3 5 3.5521 - 3.2977 0.98 4209 143 0.1727 0.2231 REMARK 3 6 3.2977 - 3.1033 1.00 4284 140 0.1903 0.2447 REMARK 3 7 3.1033 - 2.9479 0.99 4208 144 0.2055 0.1833 REMARK 3 8 2.9479 - 2.8196 0.99 4202 143 0.2066 0.2285 REMARK 3 9 2.8196 - 2.7111 1.00 4294 143 0.2079 0.2689 REMARK 3 10 2.7111 - 2.6176 0.99 4241 143 0.1994 0.2095 REMARK 3 11 2.6176 - 2.5357 1.00 4263 144 0.1857 0.1656 REMARK 3 12 2.5357 - 2.4633 1.00 4279 143 0.1922 0.2212 REMARK 3 13 2.4633 - 2.3984 0.96 4129 139 0.2504 0.3250 REMARK 3 14 2.3984 - 2.3399 1.00 4268 142 0.2150 0.2544 REMARK 3 15 2.3399 - 2.2867 0.99 4276 146 0.2144 0.2251 REMARK 3 16 2.2867 - 2.2381 1.00 4252 140 0.1923 0.2331 REMARK 3 17 2.2381 - 2.1933 1.00 4246 146 0.1956 0.2531 REMARK 3 18 2.1933 - 2.1519 1.00 4248 143 0.2007 0.2347 REMARK 3 19 2.1519 - 2.1135 1.00 4322 140 0.1807 0.1997 REMARK 3 20 2.1135 - 2.0777 1.00 4280 145 0.1825 0.2240 REMARK 3 21 2.0777 - 2.0442 1.00 4294 145 0.1968 0.2410 REMARK 3 22 2.0442 - 2.0127 1.00 4268 144 0.2031 0.2493 REMARK 3 23 2.0127 - 1.9831 1.00 4292 141 0.1939 0.2259 REMARK 3 24 1.9831 - 1.9552 1.00 4277 145 0.1915 0.2021 REMARK 3 25 1.9552 - 1.9288 1.00 4274 145 0.2433 0.2706 REMARK 3 26 1.9288 - 1.9037 0.99 4244 137 0.2611 0.2950 REMARK 3 27 1.9037 - 1.8799 0.97 4115 139 0.2713 0.3197 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3791 REMARK 3 ANGLE : 1.035 5141 REMARK 3 CHIRALITY : 0.045 589 REMARK 3 PLANARITY : 0.004 674 REMARK 3 DIHEDRAL : 13.309 1398 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5AX6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1300000108. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 118006 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 40.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.34600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5 M SODIUM FORMATE, 0.1 M SODIUM REMARK 280 ACETATE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 51.97400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 30.00720 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 121.49133 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 51.97400 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 30.00720 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 121.49133 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 51.97400 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 30.00720 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 121.49133 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 51.97400 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 30.00720 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 121.49133 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 51.97400 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 30.00720 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 121.49133 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 51.97400 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 30.00720 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 121.49133 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 60.01441 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 242.98267 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 60.01441 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 242.98267 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 60.01441 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 242.98267 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 60.01441 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 242.98267 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 60.01441 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 242.98267 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 60.01441 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 242.98267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 58920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -106.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -103.94800 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -51.97400 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -90.02161 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1012 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1026 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1033 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 26 REMARK 465 PRO A 27 REMARK 465 SER A 176 REMARK 465 ASN A 177 REMARK 465 ALA A 178 REMARK 465 ASN A 179 REMARK 465 GLU A 180 REMARK 465 SER A 181 REMARK 465 PHE A 182 REMARK 465 TYR A 183 REMARK 465 PHE A 184 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 72 O HOH A 701 2.07 REMARK 500 OD1 ASP A 241 OG1 THR A 243 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 116 32.33 -98.14 REMARK 500 ASN A 143 34.51 -143.26 REMARK 500 ARG A 150 147.65 -170.63 REMARK 500 SER A 212 -133.85 -133.09 REMARK 500 ASN A 398 79.92 -117.17 REMARK 500 ASP A 418 -129.40 58.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1033 DISTANCE = 6.75 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 601 DBREF 5AX6 A 28 517 UNP Q93I73 Q93I73_ECOLX 34 523 SEQADV 5AX6 GLY A 26 UNP Q93I73 EXPRESSION TAG SEQADV 5AX6 PRO A 27 UNP Q93I73 EXPRESSION TAG SEQRES 1 A 492 GLY PRO ASP GLU ALA ARG ARG GLN ILE VAL SER ASN ALA SEQRES 2 A 492 LEU ILE SER GLU ILE ALA GLY ILE VAL ASP PHE VAL ALA SEQRES 3 A 492 GLU GLU GLN ILE THR VAL ILE GLU GLN GLY ILE GLU LYS SEQRES 4 A 492 GLU ILE THR ASN PRO LEU TYR GLU GLN SER SER GLY ILE SEQRES 5 A 492 PRO TYR ILE ASN ARG THR THR ASN LYS ASP LEU ASN SER SEQRES 6 A 492 THR MET SER THR ASN ALA SER GLU PHE ILE ASN TRP GLY SEQRES 7 A 492 ALA GLY THR SER THR ARG ILE PHE PHE THR ARG LYS TYR SEQRES 8 A 492 CYS ILE SER THR GLY THR GLN GLY ASN TYR GLU PHE SER SEQRES 9 A 492 LYS ASP TYR ILE PRO CYS GLU GLU PRO ALA ILE LEU SER SEQRES 10 A 492 ASN SER ASP LEU LYS ILE ASP ARG ILE ASP PHE VAL ALA SEQRES 11 A 492 THR ASP ASN THR VAL GLY SER ALA ILE GLU ARG VAL ASP SEQRES 12 A 492 PHE ILE LEU THR PHE ASP LYS SER ASN ALA ASN GLU SER SEQRES 13 A 492 PHE TYR PHE SER ASN TYR VAL SER SER LEU GLU LYS ALA SEQRES 14 A 492 ALA GLU GLN HIS SER ILE SER PHE LYS ASP ILE TYR VAL SEQRES 15 A 492 VAL GLU ARG ASN SER SER GLY ALA ALA GLY TRP ARG LEU SEQRES 16 A 492 THR THR ILE SER GLY LYS PRO LEU THR PHE SER GLY LEU SEQRES 17 A 492 SER LYS ASN ILE GLY SER LEU ASP LYS THR LYS ASN TYR SEQRES 18 A 492 GLY LEU ARG LEU SER ILE ASP PRO ASN LEU GLY LYS PHE SEQRES 19 A 492 LEU ARG ALA ASP GLY ARG VAL GLY ALA ASP LYS LEU CYS SEQRES 20 A 492 TRP ASN ILE ASP ASN LYS MET SER GLY PRO CYS LEU ALA SEQRES 21 A 492 ALA ASP ASP SER GLY ASN ASN LEU VAL LEU THR LYS GLY SEQRES 22 A 492 LYS GLY ALA LYS SER ASN GLU PRO GLY LEU CYS TRP ASP SEQRES 23 A 492 LEU ASN THR GLY THR SER LYS LEU CYS LEU THR GLN ILE SEQRES 24 A 492 GLU GLY LYS ASP ASN ASN ASP LYS ASP ALA SER LEU ILE SEQRES 25 A 492 LYS LEU LYS ASP ASP ASN GLY ASN PRO ALA THR MET LEU SEQRES 26 A 492 ALA ASN ILE LEU VAL GLU GLU LYS SER MET THR ASP SER SEQRES 27 A 492 THR LYS LYS GLU LEU ARG THR ILE PRO ASN THR ILE TYR SEQRES 28 A 492 ALA ALA PHE SER ASN SER ASN ALA SER ASP LEU VAL ILE SEQRES 29 A 492 THR ASN PRO GLY ASN TYR ILE GLY ASN VAL THR SER GLU SEQRES 30 A 492 LYS GLY ARG ILE GLU LEU ASN VAL GLN ASP CYS PRO VAL SEQRES 31 A 492 SER PRO ASP GLY ASN LYS LEU HIS PRO ARG LEU SER ALA SEQRES 32 A 492 SER ILE ALA SER ILE VAL ALA ASP THR LYS ASP SER ASN SEQRES 33 A 492 GLY LYS TYR GLN ALA ASP PHE SER SER LEU ALA GLY ASN SEQRES 34 A 492 ARG ASN SER GLY GLY GLN LEU GLY TYR LEU SER GLY THR SEQRES 35 A 492 ALA ILE GLN VAL ASN GLN SER GLY SER LYS TRP TYR ILE SEQRES 36 A 492 THR ALA THR MET GLY VAL PHE ASP PRO LEU THR ASN THR SEQRES 37 A 492 THR TYR VAL TYR LEU ASN PRO LYS PHE LEU SER VAL ASN SEQRES 38 A 492 ILE THR THR TRP CYS SER THR GLU PRO GLN THR HET ACT A 601 7 HETNAM ACT ACETATE ION FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 HOH *333(H2 O) HELIX 1 AA1 ASP A 28 ALA A 51 1 24 HELIX 2 AA2 PRO A 69 GLU A 72 5 4 HELIX 3 AA3 SER A 107 THR A 113 5 7 HELIX 4 AA4 ARG A 114 ILE A 118 5 5 HELIX 5 AA5 PRO A 138 ASN A 143 5 6 HELIX 6 AA6 ASN A 186 GLN A 197 1 12 HELIX 7 AA7 GLY A 214 TRP A 218 5 5 HELIX 8 AA8 THR A 229 SER A 231 5 3 HELIX 9 AA9 GLY A 232 ILE A 237 1 6 HELIX 10 AB1 GLY A 238 LEU A 240 5 3 HELIX 11 AB2 ASN A 383 VAL A 388 1 6 HELIX 12 AB3 SER A 450 ASN A 454 5 5 SHEET 1 AA1 2 GLN A 54 GLU A 59 0 SHEET 2 AA1 2 ILE A 62 THR A 67 -1 O ILE A 66 N ILE A 55 SHEET 1 AA2 6 ILE A 100 ASN A 101 0 SHEET 2 AA2 6 LEU A 146 ALA A 155 -1 O ILE A 151 N ILE A 100 SHEET 3 AA2 6 ILE A 164 PHE A 173 -1 O ILE A 170 N ASP A 149 SHEET 4 AA2 6 ASN A 245 ILE A 252 -1 O LEU A 248 N LEU A 171 SHEET 5 AA2 6 ASP A 204 ARG A 210 -1 N TYR A 206 O ARG A 249 SHEET 6 AA2 6 ARG A 219 LEU A 220 -1 O ARG A 219 N GLU A 209 SHEET 1 AA3 2 THR A 222 ILE A 223 0 SHEET 2 AA3 2 LYS A 226 PRO A 227 -1 O LYS A 226 N ILE A 223 SHEET 1 AA4 3 LEU A 271 CYS A 272 0 SHEET 2 AA4 3 CYS A 283 ALA A 286 -1 O LEU A 284 N LEU A 271 SHEET 3 AA4 3 LEU A 293 THR A 296 -1 O VAL A 294 N ALA A 285 SHEET 1 AA5 3 GLY A 307 TRP A 310 0 SHEET 2 AA5 3 LEU A 319 LYS A 327 -1 O LEU A 321 N LEU A 308 SHEET 3 AA5 3 ASP A 333 LYS A 340 -1 O LYS A 338 N THR A 322 SHEET 1 AA6 2 VAL A 355 LYS A 358 0 SHEET 2 AA6 2 LYS A 366 ARG A 369 -1 O GLU A 367 N GLU A 357 SHEET 1 AA7 3 ASN A 373 ALA A 378 0 SHEET 2 AA7 3 LEU A 503 SER A 512 -1 O ILE A 507 N ILE A 375 SHEET 3 AA7 3 HIS A 423 ILE A 433 -1 N HIS A 423 O SER A 512 SHEET 1 AA8 3 ILE A 406 ASN A 409 0 SHEET 2 AA8 3 LYS A 477 ASP A 488 -1 O TRP A 478 N LEU A 408 SHEET 3 AA8 3 TYR A 463 GLN A 473 -1 N ASN A 472 O TYR A 479 SHEET 1 AA9 3 ILE A 406 ASN A 409 0 SHEET 2 AA9 3 LYS A 477 ASP A 488 -1 O TRP A 478 N LEU A 408 SHEET 3 AA9 3 THR A 493 LEU A 498 -1 O TYR A 495 N VAL A 486 SSBOND 1 CYS A 117 CYS A 135 1555 1555 2.03 SSBOND 2 CYS A 272 CYS A 283 1555 1555 2.06 SSBOND 3 CYS A 309 CYS A 320 1555 1555 2.05 SSBOND 4 CYS A 413 CYS A 511 1555 1555 2.12 CISPEP 1 ILE A 77 PRO A 78 0 1.16 CISPEP 2 ASP A 418 GLY A 419 0 9.52 SITE 1 AC1 6 SER A 75 GLY A 76 TYR A 79 ASN A 125 SITE 2 AC1 6 TYR A 126 HOH A 748 CRYST1 103.948 103.948 364.474 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009620 0.005554 0.000000 0.00000 SCALE2 0.000000 0.011108 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002744 0.00000