HEADER TRANSFERASE 13-AUG-15 5AYC TITLE CRYSTAL STRUCTURE OF RUMINOCOCCUS ALBUS 4-O-BETA-D-MANNOSYL-D-GLUCOSE TITLE 2 PHOSPHORYLASE (RAMP1) IN COMPLEXES WITH SULFATE AND 4-O-BETA-D- TITLE 3 MANNOSYL-D-GLUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-O-BETA-D-MANNOSYL-D-GLUCOSE PHOSPHORYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MANNOSYLGLUCOSE PHOSPHORYLASE,RAMP1; COMPND 5 EC: 2.4.1.281; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUMINOCOCCUS ALBUS (STRAIN ATCC 27210 / DSM SOURCE 3 20455 / JCM 14654 / NCDO 2250 / 7); SOURCE 4 ORGANISM_TAXID: 697329; SOURCE 5 STRAIN: ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7; SOURCE 6 GENE: RUMAL_0852; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSIDE HYDROLASE FAMILY 130, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.YE,W.SABURI,K.KATO,M.YAO REVDAT 5 20-MAR-24 5AYC 1 HETSYN LINK REVDAT 4 29-JUL-20 5AYC 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 26-FEB-20 5AYC 1 JRNL REMARK REVDAT 2 06-APR-16 5AYC 1 JRNL REVDAT 1 23-MAR-16 5AYC 0 JRNL AUTH Y.YE,W.SABURI,R.ODAKA,K.KATO,N.SAKURAI,K.KOMODA,M.NISHIMOTO, JRNL AUTH 2 M.KITAOKA,H.MORI,M.YAO JRNL TITL STRUCTURAL INSIGHTS INTO THE DIFFERENCE IN SUBSTRATE JRNL TITL 2 RECOGNITION OF TWO MANNOSIDE PHOSPHORYLASES FROM TWO GH130 JRNL TITL 3 SUBFAMILIES. JRNL REF FEBS LETT. V. 590 828 2016 JRNL REFN ISSN 0014-5793 JRNL PMID 26913570 JRNL DOI 10.1002/1873-3468.12105 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 33647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.7943 - 4.3481 1.00 2827 148 0.1450 0.1817 REMARK 3 2 4.3481 - 3.4519 1.00 2713 141 0.1310 0.1758 REMARK 3 3 3.4519 - 3.0157 1.00 2677 141 0.1489 0.1810 REMARK 3 4 3.0157 - 2.7401 1.00 2654 143 0.1604 0.1871 REMARK 3 5 2.7401 - 2.5437 1.00 2668 138 0.1666 0.2095 REMARK 3 6 2.5437 - 2.3937 1.00 2650 139 0.1621 0.2137 REMARK 3 7 2.3937 - 2.2739 1.00 2631 139 0.1557 0.2327 REMARK 3 8 2.2739 - 2.1749 1.00 2625 165 0.1566 0.1936 REMARK 3 9 2.1749 - 2.0912 1.00 2633 127 0.1544 0.2036 REMARK 3 10 2.0912 - 2.0190 1.00 2645 119 0.1612 0.2355 REMARK 3 11 2.0190 - 1.9559 1.00 2626 148 0.1727 0.2212 REMARK 3 12 1.9559 - 1.9000 1.00 2620 130 0.1974 0.2620 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3174 REMARK 3 ANGLE : 1.073 4306 REMARK 3 CHIRALITY : 0.044 475 REMARK 3 PLANARITY : 0.005 559 REMARK 3 DIHEDRAL : 13.537 1151 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5AYC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1300000174. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33714 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM NITRATE, 0.1M BIS-TRIS REMARK 280 PROPANE BUFFER, 20%(W/V) PEG3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 43.85000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 25.31681 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 94.62467 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 43.85000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 25.31681 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 94.62467 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 43.85000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 25.31681 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 94.62467 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 43.85000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 25.31681 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 94.62467 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 43.85000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 25.31681 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 94.62467 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 43.85000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 25.31681 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 94.62467 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 50.63362 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 189.24933 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 50.63362 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 189.24933 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 50.63362 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 189.24933 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 50.63362 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 189.24933 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 50.63362 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 189.24933 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 50.63362 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 189.24933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 43.85000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 75.95043 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -43.85000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 75.95043 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 505 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 852 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 894 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 904 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 633 O HOH A 831 2.00 REMARK 500 O HOH A 887 O HOH A 890 2.11 REMARK 500 OE1 GLU A 4 O HOH A 501 2.12 REMARK 500 O4 BGC B 1 O5 BMA B 2 2.12 REMARK 500 O HOH A 675 O HOH A 838 2.16 REMARK 500 O HOH A 846 O HOH A 857 2.18 REMARK 500 O HOH A 810 O HOH A 840 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 920 O HOH A 924 2665 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 70 -159.51 -155.96 REMARK 500 ASN A 71 78.83 18.12 REMARK 500 ASN A 78 70.85 6.38 REMARK 500 ASP A 169 -0.82 -141.74 REMARK 500 ARG A 206 81.14 -152.87 REMARK 500 SER A 216 -68.49 70.18 REMARK 500 ASP A 234 -85.21 -104.01 REMARK 500 THR A 239 -99.21 -118.38 REMARK 500 LYS A 309 -119.57 48.80 REMARK 500 ASN A 318 34.28 70.10 REMARK 500 SER A 349 -158.20 -140.93 REMARK 500 LEU A 366 -30.34 75.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AYE RELATED DB: PDB REMARK 900 RELATED ID: 5AYD RELATED DB: PDB REMARK 900 RELATED ID: 5AY9 RELATED DB: PDB DBREF 5AYC A 1 386 UNP E6UIS7 MGP_RUMA7 1 386 SEQRES 1 A 386 MET ILE HIS GLU LYS TYR THR GLU MET ARG ASN GLU GLN SEQRES 2 A 386 GLU ALA LEU LEU SER ARG LYS ASN THR LYS THR SER PHE SEQRES 3 A 386 TYR ASN GLY ILE TYR ASP ARG TYR GLU HIS PRO VAL LEU SEQRES 4 A 386 THR ARG GLU HIS ILE PRO LEU HIS TRP ARG TYR ASP LEU SEQRES 5 A 386 ASN LYS GLU THR ASN PRO PHE PHE GLN GLU ARG LEU GLY SEQRES 6 A 386 ILE ASN ALA VAL PHE ASN ALA GLY ALA ILE LYS LEU ASN SEQRES 7 A 386 ASP ARG TYR CYS LEU VAL ALA ARG VAL GLU GLY ASN ASP SEQRES 8 A 386 ARG LYS SER PHE PHE ALA VAL ALA GLU SER ASP LYS GLY SEQRES 9 A 386 THR GLU GLY PHE ARG PHE ARG GLN TYR PRO VAL CYS LEU SEQRES 10 A 386 PRO ALA LEU THR ASP ASP GLU THR ASN VAL TYR ASP MET SEQRES 11 A 386 ARG LEU THR GLN HIS GLU ASP GLY TRP ILE TYR GLY VAL SEQRES 12 A 386 PHE CYS VAL GLU LYS SER ALA GLY THR ALA ASP LEU SER SEQRES 13 A 386 GLU ALA VAL ALA SER ALA GLY ILE ALA ARG THR LYS ASP SEQRES 14 A 386 LEU THR ASN TRP GLU ARG LEU PRO ASP LEU VAL THR LEU SEQRES 15 A 386 ARG SER PRO GLN GLN ARG ASN VAL THR LEU LEU PRO GLU SEQRES 16 A 386 PHE VAL ASP GLY LYS TYR ALA PHE TYR THR ARG PRO MET SEQRES 17 A 386 ASP GLY PHE ILE GLU THR GLY SER GLY GLY GLY ILE GLY SEQRES 18 A 386 PHE GLY LEU ALA ASP ASP ILE THR HIS ALA VAL ILE ASP SEQRES 19 A 386 GLU GLU ARG MET THR SER ILE ARG ARG TYR HIS THR ILE SEQRES 20 A 386 THR GLU SER LYS ASN GLY ALA GLY ALA THR PRO ILE LYS SEQRES 21 A 386 THR GLU ARG GLY TRP LEU ASN ILE ALA HIS GLY VAL ARG SEQRES 22 A 386 ASN THR ALA ALA GLY LEU ARG TYR VAL ILE TYR CYS PHE SEQRES 23 A 386 VAL THR ASP LEU SER GLU PRO TRP LYS VAL ILE ALA GLU SEQRES 24 A 386 PRO GLY GLY TYR LEU ILE ALA PRO PHE LYS ASP GLU ARG SEQRES 25 A 386 VAL GLY ASP VAL SER ASN VAL VAL PHE THR ASN GLY ALA SEQRES 26 A 386 ILE VAL ASP ASP ASN GLY ASP VAL TYR ILE TYR TYR ALA SEQRES 27 A 386 SER SER ASP THR ARG LEU HIS VAL ALA VAL SER SER ILE SEQRES 28 A 386 ASP LYS LEU LEU ASP TYR ALA PHE ASN THR PRO ALA ASP SEQRES 29 A 386 ALA LEU ARG THR ALA GLU CYS VAL LYS GLN ARG CYS ASP SEQRES 30 A 386 LEU ILE LYS ARG ASN ILE GLU LEU LEU HET BGC B 1 12 HET BMA B 2 11 HET SO4 A 401 5 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM SO4 SULFATE ION HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 BGC C6 H12 O6 FORMUL 2 BMA C6 H12 O6 FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *458(H2 O) HELIX 1 AA1 GLU A 4 ARG A 19 1 16 HELIX 2 AA2 THR A 40 ILE A 44 5 5 HELIX 3 AA3 PRO A 45 ARG A 49 5 5 HELIX 4 AA4 ASP A 227 HIS A 230 5 4 HELIX 5 AA5 PHE A 308 VAL A 313 5 6 HELIX 6 AA6 ILE A 351 THR A 361 1 11 HELIX 7 AA7 ARG A 367 LEU A 386 1 20 SHEET 1 AA1 4 ILE A 66 LEU A 77 0 SHEET 2 AA1 4 ARG A 80 GLY A 89 -1 O ARG A 80 N LEU A 77 SHEET 3 AA1 4 SER A 94 SER A 101 -1 O PHE A 95 N VAL A 87 SHEET 4 AA1 4 ARG A 109 PHE A 110 -1 O ARG A 109 N GLU A 100 SHEET 1 AA2 4 ASN A 126 GLN A 134 0 SHEET 2 AA2 4 ILE A 140 SER A 149 -1 O CYS A 145 N TYR A 128 SHEET 3 AA2 4 ALA A 158 THR A 167 -1 O ALA A 165 N GLY A 142 SHEET 4 AA2 4 TRP A 173 ARG A 175 -1 O GLU A 174 N ARG A 166 SHEET 1 AA3 2 VAL A 180 THR A 181 0 SHEET 2 AA3 2 VAL A 232 ILE A 233 1 O ILE A 233 N VAL A 180 SHEET 1 AA4 2 GLN A 186 GLN A 187 0 SHEET 2 AA4 2 PRO A 207 MET A 208 -1 O MET A 208 N GLN A 186 SHEET 1 AA5 4 THR A 191 LEU A 192 0 SHEET 2 AA5 4 TYR A 201 THR A 205 -1 O TYR A 204 N THR A 191 SHEET 3 AA5 4 GLY A 219 ALA A 225 -1 O ALA A 225 N TYR A 201 SHEET 4 AA5 4 ARG A 237 ILE A 241 -1 O SER A 240 N ILE A 220 SHEET 1 AA6 3 LYS A 251 GLY A 253 0 SHEET 2 AA6 3 GLY A 264 THR A 275 -1 O VAL A 272 N LYS A 251 SHEET 3 AA6 3 ILE A 259 THR A 261 -1 N ILE A 259 O LEU A 266 SHEET 1 AA7 4 LYS A 251 GLY A 253 0 SHEET 2 AA7 4 GLY A 264 THR A 275 -1 O VAL A 272 N LYS A 251 SHEET 3 AA7 4 GLY A 278 THR A 288 -1 O ARG A 280 N ARG A 273 SHEET 4 AA7 4 VAL A 296 ALA A 298 -1 O ILE A 297 N VAL A 287 SHEET 1 AA8 3 VAL A 320 VAL A 327 0 SHEET 2 AA8 3 ASP A 332 SER A 339 -1 O ALA A 338 N PHE A 321 SHEET 3 AA8 3 ARG A 343 SER A 350 -1 O ALA A 347 N ILE A 335 LINK O4 BGC B 1 C1 BMA B 2 1555 1555 1.52 CISPEP 1 GLY A 215 SER A 216 0 20.82 CRYST1 87.700 87.700 283.874 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011403 0.006583 0.000000 0.00000 SCALE2 0.000000 0.013166 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003523 0.00000