HEADER TRANSPORT PROTEIN 20-APR-16 5B51 TITLE CRYSTAL STRUCTURE OF HEME BINDING PROTEIN HMUT R242A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC-TYPE TRANSPORTER, PERIPLASMIC COMPONENT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 24-359; COMPND 5 SYNONYM: HMUT; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM ATCC 13032; SOURCE 3 ORGANISM_TAXID: 196627; SOURCE 4 STRAIN: ATCC 13032; SOURCE 5 ATCC: 13032; SOURCE 6 GENE: CGL0389; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET22 KEYWDS HEME, ABC TRANSPORTER, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.MURAKI,S.AONO REVDAT 3 08-NOV-23 5B51 1 REMARK REVDAT 2 26-FEB-20 5B51 1 REMARK REVDAT 1 01-MAR-17 5B51 0 JRNL AUTH N.MURAKI,C.KITATSUJI,M.OGURA,T.UCHIDA,K.ISHIMORI,S.AONO JRNL TITL STRUCTURAL CHARACTERIZATION OF HEME ENVIRONMENTAL MUTANTS OF JRNL TITL 2 CGHMUT THAT SHUTTLES HEME MOLECULES TO HEME TRANSPORTERS JRNL REF INT J MOL SCI V. 17 2016 JRNL REFN ESSN 1422-0067 JRNL PMID 27240352 JRNL DOI 10.3390/IJMS17060829 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 92123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4770 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6733 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.1890 REMARK 3 BIN FREE R VALUE SET COUNT : 313 REMARK 3 BIN FREE R VALUE : 0.2110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2338 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 225 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.043 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.041 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.023 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.217 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2507 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2409 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3457 ; 1.351 ; 2.012 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5556 ; 0.940 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 353 ; 5.751 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;31.913 ;25.319 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 396 ;10.485 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;15.983 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 423 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2923 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 502 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1331 ; 0.881 ; 1.423 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1330 ; 0.879 ; 1.422 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1672 ; 1.168 ; 2.144 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1673 ; 1.168 ; 2.145 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1176 ; 1.437 ; 1.668 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1174 ; 1.431 ; 1.664 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1772 ; 1.767 ; 2.418 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2998 ; 2.065 ;12.638 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2889 ; 1.961 ;12.250 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4916 ; 0.948 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 57 ;16.750 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5033 ; 7.021 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5B51 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-APR-16. REMARK 100 THE DEPOSITION ID IS D_1300000340. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96893 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.48700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.580 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5AZ3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.90 M AMMONIUM SULFATE, 0.19 M REMARK 280 AMMONIUM TARTRATE, 0.16 M POTASSIUM THIOCYANATE, PH 8.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.53500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.53000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.53000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.76750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.53000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.53000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 110.30250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.53000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.53000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.76750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.53000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.53000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 110.30250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.53500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 675 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 23 REMARK 465 ALA A 24 REMARK 465 SER A 25 REMARK 465 TRP A 26 REMARK 465 ASP A 27 REMARK 465 SER A 28 REMARK 465 PRO A 29 REMARK 465 THR A 30 REMARK 465 ALA A 31 REMARK 465 GLN A 356 REMARK 465 GLY A 357 REMARK 465 GLY A 358 REMARK 465 GLU A 359 REMARK 465 LEU A 360 REMARK 465 GLU A 361 REMARK 465 HIS A 362 REMARK 465 HIS A 363 REMARK 465 HIS A 364 REMARK 465 HIS A 365 REMARK 465 HIS A 366 REMARK 465 HIS A 367 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 39 CG CD OE1 OE2 REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 GLU A 231 CD OE1 OE2 REMARK 470 LYS A 273 CD CE NZ REMARK 470 GLN A 334 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 71 47.75 -141.82 REMARK 500 ASP A 277 -93.70 -116.46 REMARK 500 ASN A 290 62.86 37.63 REMARK 500 PHE A 338 -128.29 47.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 725 DISTANCE = 5.84 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 141 NE2 REMARK 620 2 HEM A 401 NA 87.1 REMARK 620 3 HEM A 401 NB 88.2 89.5 REMARK 620 4 HEM A 401 NC 93.1 179.0 89.5 REMARK 620 5 HEM A 401 ND 92.5 90.8 179.3 90.3 REMARK 620 6 TYR A 240 OH 179.4 92.3 91.7 87.5 87.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AZ3 RELATED DB: PDB REMARK 900 5AZ3 CONTAINS THE WILD TYPE HMUT FROM CORYNEBACTERIUM GLUTAMICUM. REMARK 900 RELATED ID: 5B4Z RELATED DB: PDB REMARK 900 RELATED ID: 5B50 RELATED DB: PDB DBREF 5B51 A 24 359 UNP Q8NTB8 Q8NTB8_CORGL 24 359 SEQADV 5B51 MET A 23 UNP Q8NTB8 EXPRESSION TAG SEQADV 5B51 ALA A 242 UNP Q8NTB8 ARG 242 ENGINEERED MUTATION SEQADV 5B51 LEU A 360 UNP Q8NTB8 EXPRESSION TAG SEQADV 5B51 GLU A 361 UNP Q8NTB8 EXPRESSION TAG SEQADV 5B51 HIS A 362 UNP Q8NTB8 EXPRESSION TAG SEQADV 5B51 HIS A 363 UNP Q8NTB8 EXPRESSION TAG SEQADV 5B51 HIS A 364 UNP Q8NTB8 EXPRESSION TAG SEQADV 5B51 HIS A 365 UNP Q8NTB8 EXPRESSION TAG SEQADV 5B51 HIS A 366 UNP Q8NTB8 EXPRESSION TAG SEQADV 5B51 HIS A 367 UNP Q8NTB8 EXPRESSION TAG SEQRES 1 A 345 MET ALA SER TRP ASP SER PRO THR ALA SER SER ASN GLY SEQRES 2 A 345 ASP LEU ILE GLU GLU ILE GLN ALA SER SER THR SER THR SEQRES 3 A 345 ASP PRO ARG THR PHE THR GLY LEU SER ILE VAL GLU ASP SEQRES 4 A 345 ILE GLY ASP VAL VAL PRO VAL THR ASP ASN ALA SER PRO SEQRES 5 A 345 ALA LEU PRO VAL SER LEU THR ASP ALA ASP GLY ASN ASP SEQRES 6 A 345 VAL VAL VAL GLU ASP VAL SER ARG ILE LEU PRO LEU ASP SEQRES 7 A 345 LEU TYR GLY THR TYR SER LYS THR ILE ALA GLY LEU GLY SEQRES 8 A 345 LEU VAL ASP ASN ILE VAL GLY ARG THR VAL SER SER THR SEQRES 9 A 345 GLU PRO ALA LEU ALA ASP THR GLU VAL VAL THR THR GLY SEQRES 10 A 345 GLY HIS THR LEU ASN ALA GLU ALA ILE LEU ASN LEU HIS SEQRES 11 A 345 PRO THR LEU VAL ILE ILE ASP HIS SER ILE GLY PRO ARG SEQRES 12 A 345 GLU VAL ILE ASP GLN ILE ARG ALA ALA GLY VAL ALA THR SEQRES 13 A 345 VAL ILE MET SER PRO GLN ARG SER ILE ALA SER ILE GLY SEQRES 14 A 345 ASP ASP ILE ARG ASP ILE ALA SER VAL VAL GLY LEU PRO SEQRES 15 A 345 GLU GLU GLY GLU LYS LEU ALA GLU ARG SER VAL ALA GLU SEQRES 16 A 345 VAL GLU GLU ALA SER THR VAL VAL ASP GLU LEU THR PRO SEQRES 17 A 345 GLU ASP PRO LEU LYS MET VAL PHE LEU TYR ALA ALA GLY SEQRES 18 A 345 THR GLY GLY VAL PHE PHE ILE LEU GLY ASP ALA TYR GLY SEQRES 19 A 345 GLY ARG ASP LEU ILE GLU GLY LEU GLY GLY VAL ASP MET SEQRES 20 A 345 ALA ALA GLU LYS GLY ILE MET ASP LEU ALA PRO ALA ASN SEQRES 21 A 345 ALA GLU ALA LEU ALA GLU LEU ASN PRO ASP VAL PHE VAL SEQRES 22 A 345 MET MET SER GLU GLY LEU VAL SER THR GLY GLY ILE ASP SEQRES 23 A 345 GLY LEU MET GLU ARG PRO GLY ILE ALA GLN THR THR ALA SEQRES 24 A 345 GLY GLN ASN GLN ARG VAL LEU ALA LEU PRO ASP GLY GLN SEQRES 25 A 345 SER LEU ALA PHE GLY ALA GLN THR GLY GLU LEU LEU LEU SEQRES 26 A 345 ARG ALA SER ARG GLU LEU TYR VAL GLN GLY GLY GLU LEU SEQRES 27 A 345 GLU HIS HIS HIS HIS HIS HIS HET HEM A 401 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 HOH *225(H2 O) HELIX 1 AA1 ASN A 34 SER A 44 1 11 HELIX 2 AA2 ASP A 49 PHE A 53 5 5 HELIX 3 AA3 GLY A 103 LEU A 112 1 10 HELIX 4 AA4 LEU A 114 ILE A 118 5 5 HELIX 5 AA5 GLU A 127 ALA A 131 5 5 HELIX 6 AA6 ASN A 144 LEU A 151 1 8 HELIX 7 AA7 PRO A 164 ALA A 174 1 11 HELIX 8 AA8 SER A 186 ALA A 188 5 3 HELIX 9 AA9 SER A 189 VAL A 201 1 13 HELIX 10 AB1 LEU A 203 THR A 229 1 27 HELIX 11 AB2 ASP A 253 TYR A 255 5 3 HELIX 12 AB3 GLY A 256 LEU A 264 1 9 HELIX 13 AB4 MET A 269 GLY A 274 1 6 HELIX 14 AB5 ASN A 282 ASN A 290 1 9 HELIX 15 AB6 SER A 298 THR A 304 1 7 HELIX 16 AB7 GLY A 305 GLU A 312 1 8 HELIX 17 AB8 THR A 319 ASN A 324 1 6 HELIX 18 AB9 PRO A 331 LEU A 336 1 6 HELIX 19 AC1 PHE A 338 ALA A 340 5 3 HELIX 20 AC2 GLN A 341 VAL A 355 1 15 SHEET 1 AA1 5 LEU A 56 ILE A 58 0 SHEET 2 AA1 5 VAL A 327 LEU A 330 1 O ALA A 329 N SER A 57 SHEET 3 AA1 5 VAL A 293 MET A 297 1 N PHE A 294 O LEU A 328 SHEET 4 AA1 5 LYS A 235 ALA A 241 1 N VAL A 237 O VAL A 295 SHEET 5 AA1 5 VAL A 267 ASP A 268 1 O VAL A 267 N MET A 236 SHEET 1 AA2 6 LEU A 56 ILE A 58 0 SHEET 2 AA2 6 VAL A 327 LEU A 330 1 O ALA A 329 N SER A 57 SHEET 3 AA2 6 VAL A 293 MET A 297 1 N PHE A 294 O LEU A 328 SHEET 4 AA2 6 LYS A 235 ALA A 241 1 N VAL A 237 O VAL A 295 SHEET 5 AA2 6 PHE A 248 LEU A 251 -1 O PHE A 249 N TYR A 240 SHEET 6 AA2 6 LEU A 278 PRO A 280 -1 O ALA A 279 N ILE A 250 SHEET 1 AA3 2 VAL A 78 THR A 81 0 SHEET 2 AA3 2 ASP A 87 VAL A 90 -1 O VAL A 88 N LEU A 80 SHEET 1 AA4 3 ILE A 96 LEU A 99 0 SHEET 2 AA4 3 LEU A 155 ILE A 158 1 O ILE A 157 N LEU A 99 SHEET 3 AA4 3 THR A 178 ILE A 180 1 O VAL A 179 N VAL A 156 SHEET 1 AA5 2 THR A 137 THR A 138 0 SHEET 2 AA5 2 THR A 142 LEU A 143 -1 O THR A 142 N THR A 138 LINK NE2 HIS A 141 FE HEM A 401 1555 1555 2.13 LINK OH TYR A 240 FE HEM A 401 1555 1555 2.02 CISPEP 1 LEU A 76 PRO A 77 0 3.43 CISPEP 2 GLY A 163 PRO A 164 0 7.90 SITE 1 AC1 10 LEU A 101 VAL A 123 SER A 124 GLY A 140 SITE 2 AC1 10 HIS A 141 TYR A 240 PHE A 249 MET A 297 SITE 3 AC1 10 GLU A 299 ASP A 332 CRYST1 73.060 73.060 147.070 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013687 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013687 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006799 0.00000