HEADER TRANSFERASE 22-APR-16 5B53 TITLE CRYSTAL STRUCTURE OF HYDROGEN SULFIDE-PRODUCING ENZYME (FN1055) FROM TITLE 2 FUSOBACTERIUM NUCLEATUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.5.1.47; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FUSOBACTERIUM NUCLEATUM SUBSP. NUCLEATUM ATCC SOURCE 3 25586; SOURCE 4 ORGANISM_TAXID: 190304; SOURCE 5 STRAIN: ATCC 25586; SOURCE 6 GENE: FN1055; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS PYRIDOXAL 5'-PHOSPHATE DEPENDENT ENZYME, INTERNAL ALDIMINE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KEZUKA,Y.YOSHIDA,T.NONAKA REVDAT 3 08-NOV-23 5B53 1 REMARK REVDAT 2 26-FEB-20 5B53 1 REMARK REVDAT 1 26-APR-17 5B53 0 JRNL AUTH Y.KEZUKA,Y.YOSHIDA,T.NONAKA JRNL TITL CRYSTAL STRUCTURE OF HYDROGEN SULFIDE-PRODUCING ENZYME JRNL TITL 2 (FN1055) FROM FUSOBACTERIUM NUCLEATUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 8058 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 392 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 576 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 35 REMARK 3 BIN FREE R VALUE : 0.3430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2599 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.14000 REMARK 3 B22 (A**2) : -0.14000 REMARK 3 B33 (A**2) : 0.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.450 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.319 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.631 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.854 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2656 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2630 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3569 ; 2.150 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6089 ; 0.955 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 333 ; 8.118 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 107 ;39.850 ;25.327 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 516 ;20.763 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;25.827 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 399 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2940 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 546 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5B53 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-APR-16. REMARK 100 THE DEPOSITION ID IS D_1300000543. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8510 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 33.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.13700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1O58 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4% (W/V) PEG 8000, 0.1M HEPES PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 102.52650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 153.78975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.26325 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 102.52650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.26325 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 153.78975 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 51.26325 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 LEU A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ILE A 336 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 19 CA - CB - CG ANGL. DEV. = 17.4 DEGREES REMARK 500 GLY A 27 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 ARG A 104 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 26 73.98 35.00 REMARK 500 TYR A 39 58.44 -68.18 REMARK 500 SER A 119 -167.92 -64.79 REMARK 500 LYS A 121 -87.27 103.51 REMARK 500 ASP A 141 -42.07 -10.92 REMARK 500 SER A 146 69.89 36.24 REMARK 500 ASN A 153 -74.52 -70.29 REMARK 500 SER A 213 62.00 -158.10 REMARK 500 TYR A 220 -30.86 -144.42 REMARK 500 ASP A 232 -161.96 -69.00 REMARK 500 GLU A 233 31.14 -95.74 REMARK 500 ASP A 242 0.15 -61.38 REMARK 500 LYS A 289 -18.97 -49.90 REMARK 500 ARG A 334 135.83 -174.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 26 GLY A 27 -46.39 REMARK 500 PRO A 140 ASP A 141 137.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5B54 RELATED DB: PDB REMARK 900 RELATED ID: 5B55 RELATED DB: PDB DBREF 5B53 A 2 336 UNP Q8REP3 Q8REP3_FUSNN 2 336 SEQADV 5B53 GLY A -3 UNP Q8REP3 EXPRESSION TAG SEQADV 5B53 PRO A -2 UNP Q8REP3 EXPRESSION TAG SEQADV 5B53 LEU A -1 UNP Q8REP3 EXPRESSION TAG SEQADV 5B53 GLY A 0 UNP Q8REP3 EXPRESSION TAG SEQADV 5B53 SER A 1 UNP Q8REP3 EXPRESSION TAG SEQRES 1 A 340 GLY PRO LEU GLY SER GLU GLN LYS LYS MET LYS TYR LEU SEQRES 2 A 340 GLU ASN LEU VAL GLY LYS THR PRO MET LEU GLU LEU ILE SEQRES 3 A 340 PHE ASP TYR LYS GLY GLU GLU ARG ARG ILE PHE VAL LYS SEQRES 4 A 340 ASN GLU SER TYR ASN LEU THR GLY SER ILE LYS ASP ARG SEQRES 5 A 340 MET ALA PHE TYR THR LEU LYS LYS ALA TYR GLU LYS ASN SEQRES 6 A 340 GLU ILE LYS LYS GLY ALA PRO ILE VAL GLU ALA THR SER SEQRES 7 A 340 GLY ASN THR GLY ILE ALA PHE SER ALA MET GLY ALA ILE SEQRES 8 A 340 LEU GLY HIS PRO VAL ILE ILE TYR MET PRO ASP TRP MET SEQRES 9 A 340 SER GLU GLU ARG LYS SER LEU ILE ARG SER PHE GLY ALA SEQRES 10 A 340 LYS ILE ILE LEU VAL SER ARG LYS GLU GLY GLY PHE LEU SEQRES 11 A 340 GLY SER ILE GLU LYS THR LYS GLU PHE ALA LYS ASN ASN SEQRES 12 A 340 PRO ASP THR TYR LEU PRO SER GLN PHE SER ASN LEU TYR SEQRES 13 A 340 ASN SER GLU ALA HIS TYR TYR GLY ILE GLY LEU GLU ILE SEQRES 14 A 340 VAL ASN GLU MET LYS SER LEU ASN LEU ASN ILE ASP GLY SEQRES 15 A 340 PHE VAL ALA GLY VAL GLY THR GLY GLY THR VAL MET GLY SEQRES 16 A 340 ILE GLY LYS ARG ILE LYS GLU ASN PHE SER ASN ALA LYS SEQRES 17 A 340 ILE CYS PRO LEU GLU PRO LEU ASN SER PRO THR LEU SER SEQRES 18 A 340 THR GLY TYR LYS VAL ALA LYS HIS ARG ILE GLU GLY ILE SEQRES 19 A 340 SER ASP GLU PHE ILE PRO ASP LEU VAL LYS LEU ASP LYS SEQRES 20 A 340 LEU ASP ASN VAL VAL SER VAL ASP ASP GLY ASP ALA ILE SEQRES 21 A 340 VAL MET ALA GLN LYS LEU ALA LYS CYS GLY LEU GLY VAL SEQRES 22 A 340 GLY ILE SER SER GLY ALA ASN PHE ILE GLY ALA LEU MET SEQRES 23 A 340 LEU GLN ASN LYS LEU GLY LYS ASP SER VAL ILE VAL THR SEQRES 24 A 340 VAL PHE PRO ASP ASP ASN LYS LYS TYR LEU SER THR ASP SEQRES 25 A 340 LEU MET ARG GLU GLU LYS VAL LYS GLU ASP PHE LEU SER SEQRES 26 A 340 LYS ASP ILE THR LEU LYS GLU ILE LYS ASN VAL LEU ARG SEQRES 27 A 340 VAL ILE HET PLP A 401 15 HET CL A 402 1 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM CL CHLORIDE ION HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 2 PLP C8 H10 N O6 P FORMUL 3 CL CL 1- FORMUL 4 HOH *9(H2 O) HELIX 1 AA1 GLU A 2 GLU A 10 1 9 HELIX 2 AA2 ASN A 11 VAL A 13 5 3 HELIX 3 AA3 ILE A 45 LYS A 60 1 16 HELIX 4 AA4 GLY A 75 LEU A 88 1 14 HELIX 5 AA5 SER A 101 PHE A 111 1 11 HELIX 6 AA6 GLY A 123 ASN A 139 1 17 HELIX 7 AA7 ASN A 150 GLY A 160 1 11 HELIX 8 AA8 GLY A 160 LEU A 172 1 13 HELIX 9 AA9 GLY A 186 PHE A 200 1 15 HELIX 10 AB1 PRO A 214 GLY A 219 1 6 HELIX 11 AB2 LYS A 240 LEU A 244 5 5 HELIX 12 AB3 ASP A 251 CYS A 265 1 15 HELIX 13 AB4 GLY A 270 GLY A 288 1 19 HELIX 14 AB5 ASP A 300 TYR A 304 5 5 HELIX 15 AB6 THR A 307 ARG A 311 5 5 HELIX 16 AB7 LEU A 320 LYS A 322 5 3 SHEET 1 AA1 7 VAL A 248 VAL A 250 0 SHEET 2 AA1 7 LYS A 204 PRO A 210 1 N GLU A 209 O VAL A 248 SHEET 3 AA1 7 GLY A 178 GLY A 182 1 N PHE A 179 O LYS A 204 SHEET 4 AA1 7 ILE A 293 PHE A 297 1 O VAL A 294 N GLY A 178 SHEET 5 AA1 7 GLU A 28 ASN A 36 1 N LYS A 35 O PHE A 297 SHEET 6 AA1 7 MET A 18 TYR A 25 -1 N LEU A 19 O VAL A 34 SHEET 7 AA1 7 ILE A 324 LEU A 333 -1 O THR A 325 N ASP A 24 SHEET 1 AA2 3 ILE A 69 ALA A 72 0 SHEET 2 AA2 3 VAL A 92 PRO A 97 1 O ILE A 93 N ILE A 69 SHEET 3 AA2 3 LYS A 114 VAL A 118 1 O VAL A 118 N MET A 96 LINK NZ LYS A 46 C4A PLP A 401 1555 1555 1.34 CISPEP 1 ARG A 120 LYS A 121 0 2.85 SITE 1 AC1 18 LYS A 46 ASN A 76 GLY A 182 VAL A 183 SITE 2 AC1 18 GLY A 184 THR A 185 GLY A 186 GLY A 187 SITE 3 AC1 18 THR A 188 GLU A 228 GLY A 229 ILE A 230 SITE 4 AC1 18 SER A 272 PRO A 298 ASP A 299 TYR A 304 SITE 5 AC1 18 HOH A 501 HOH A 505 SITE 1 AC2 1 ASN A 246 CRYST1 58.793 58.793 205.053 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017009 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004877 0.00000