HEADER HYDROLASE 13-MAY-16 5B5Q TITLE 1.7 ANGSTROMS STRUCTURE OF CHLADUB1 FROM CHLAMYDIA TRACHOMATIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE THIOL PROTEASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 159-401; COMPND 5 EC: 3.4.22.-; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: CHLAMYDIA TRACHOMATIS DEUBIQUITINASE 1; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: MEMBRANE THIOL PROTEASE; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 155-401; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDIA TRACHOMATIS; SOURCE 3 ORGANISM_TAXID: 813; SOURCE 4 GENE: CDU1, ERS066953_00737; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: CHLAMYDIA TRACHOMATIS; SOURCE 9 ORGANISM_TAXID: 813; SOURCE 10 GENE: CT868; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS CHLAMYDIA TRACHOMATIS, DEUBIQUITINASE., HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.A.RAMIREZ,C.KISKER,F.SAUER REVDAT 3 20-MAR-24 5B5Q 1 REMARK REVDAT 2 22-NOV-17 5B5Q 1 JRNL REVDAT 1 29-MAR-17 5B5Q 0 JRNL AUTH A.FISCHER,K.S.HARRISON,Y.RAMIREZ,D.AUER,S.R.CHOWDHURY, JRNL AUTH 2 B.K.PRUSTY,F.SAUER,Z.DIMOND,C.KISKER,P.SCOTT HEFTY,T.RUDEL JRNL TITL CHLAMYDIA TRACHOMATIS-CONTAINING VACUOLE SERVES AS JRNL TITL 2 DEUBIQUITINATION PLATFORM TO STABILIZE MCL-1 AND TO JRNL TITL 3 INTERFERE WITH HOST DEFENSE JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28347402 JRNL DOI 10.7554/ELIFE.21465 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 44894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2228 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.8639 - 4.2821 0.99 2717 148 0.1554 0.1846 REMARK 3 2 4.2821 - 3.3995 1.00 2694 136 0.1285 0.1817 REMARK 3 3 3.3995 - 2.9699 1.00 2700 115 0.1474 0.2019 REMARK 3 4 2.9699 - 2.6984 1.00 2677 147 0.1514 0.1957 REMARK 3 5 2.6984 - 2.5051 1.00 2660 143 0.1484 0.1902 REMARK 3 6 2.5051 - 2.3574 1.00 2669 139 0.1467 0.1959 REMARK 3 7 2.3574 - 2.2394 1.00 2673 124 0.1525 0.2177 REMARK 3 8 2.2394 - 2.1419 1.00 2690 133 0.1603 0.2091 REMARK 3 9 2.1419 - 2.0594 1.00 2646 125 0.1652 0.2051 REMARK 3 10 2.0594 - 1.9884 1.00 2666 147 0.1766 0.2348 REMARK 3 11 1.9884 - 1.9262 1.00 2633 136 0.1937 0.2592 REMARK 3 12 1.9262 - 1.8711 1.00 2641 166 0.2021 0.2330 REMARK 3 13 1.8711 - 1.8219 1.00 2692 146 0.2299 0.2555 REMARK 3 14 1.8219 - 1.7774 1.00 2590 150 0.2465 0.3001 REMARK 3 15 1.7774 - 1.7370 1.00 2696 145 0.2677 0.3171 REMARK 3 16 1.7370 - 1.7001 1.00 2622 128 0.2708 0.3281 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4042 REMARK 3 ANGLE : 0.941 5515 REMARK 3 CHIRALITY : 0.037 612 REMARK 3 PLANARITY : 0.004 700 REMARK 3 DIHEDRAL : 11.834 1495 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 159 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.0667 -7.1328 74.0357 REMARK 3 T TENSOR REMARK 3 T11: 0.2129 T22: 0.1112 REMARK 3 T33: 0.0809 T12: 0.0172 REMARK 3 T13: 0.0306 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 1.7987 L22: 1.0751 REMARK 3 L33: 1.3347 L12: -0.6389 REMARK 3 L13: 0.0110 L23: 0.1969 REMARK 3 S TENSOR REMARK 3 S11: 0.1292 S12: 0.2155 S13: -0.0309 REMARK 3 S21: -0.1461 S22: -0.0850 S23: 0.0605 REMARK 3 S31: -0.2029 S32: -0.1996 S33: -0.0435 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.2707 -1.6310 82.4448 REMARK 3 T TENSOR REMARK 3 T11: 0.1547 T22: 0.1459 REMARK 3 T33: 0.1775 T12: -0.0101 REMARK 3 T13: 0.0512 T23: -0.0516 REMARK 3 L TENSOR REMARK 3 L11: 3.3302 L22: 8.9606 REMARK 3 L33: 3.8399 L12: 2.0348 REMARK 3 L13: -0.1200 L23: 0.1699 REMARK 3 S TENSOR REMARK 3 S11: -0.0562 S12: -0.0813 S13: 0.0952 REMARK 3 S21: -0.5392 S22: 0.2641 S23: -0.6519 REMARK 3 S31: -0.0911 S32: 0.2982 S33: -0.1624 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 215 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.4566 6.5197 75.5763 REMARK 3 T TENSOR REMARK 3 T11: 0.5018 T22: 0.2247 REMARK 3 T33: 0.2865 T12: -0.0802 REMARK 3 T13: 0.1333 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.8420 L22: 2.3043 REMARK 3 L33: 5.1629 L12: 0.6362 REMARK 3 L13: 1.4203 L23: -0.0413 REMARK 3 S TENSOR REMARK 3 S11: -0.1425 S12: 0.1627 S13: 0.0879 REMARK 3 S21: -0.4492 S22: 0.1789 S23: -0.4326 REMARK 3 S31: -0.8216 S32: 0.6212 S33: -0.0479 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 239 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0023 -14.6038 77.4336 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.0776 REMARK 3 T33: 0.0637 T12: 0.0032 REMARK 3 T13: 0.0142 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 0.6990 L22: 2.4292 REMARK 3 L33: 1.8847 L12: -0.0549 REMARK 3 L13: -0.2251 L23: 1.0904 REMARK 3 S TENSOR REMARK 3 S11: -0.0181 S12: -0.0573 S13: 0.0156 REMARK 3 S21: -0.0439 S22: 0.0983 S23: -0.0655 REMARK 3 S31: -0.0690 S32: 0.0702 S33: -0.0596 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 255 THROUGH 268 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.2155 -19.9238 65.5440 REMARK 3 T TENSOR REMARK 3 T11: 0.2334 T22: 0.0950 REMARK 3 T33: 0.0929 T12: -0.0045 REMARK 3 T13: 0.0430 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 6.1042 L22: 1.1704 REMARK 3 L33: 7.7843 L12: -0.2855 REMARK 3 L13: 5.1406 L23: -0.2163 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.3547 S13: 0.0495 REMARK 3 S21: -0.2993 S22: 0.1143 S23: -0.0685 REMARK 3 S31: 0.1476 S32: 0.2860 S33: -0.0563 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 269 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3997 -14.8907 83.7401 REMARK 3 T TENSOR REMARK 3 T11: 0.0953 T22: 0.0784 REMARK 3 T33: 0.0782 T12: 0.0101 REMARK 3 T13: 0.0207 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.3654 L22: 2.0876 REMARK 3 L33: 1.8697 L12: 0.9472 REMARK 3 L13: 0.5565 L23: 0.6238 REMARK 3 S TENSOR REMARK 3 S11: -0.0110 S12: -0.0224 S13: 0.0804 REMARK 3 S21: -0.0230 S22: -0.0472 S23: 0.1023 REMARK 3 S31: -0.0425 S32: -0.0964 S33: 0.0781 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 302 THROUGH 321 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.2329 -10.9378 92.3913 REMARK 3 T TENSOR REMARK 3 T11: 0.1108 T22: 0.0936 REMARK 3 T33: 0.1267 T12: 0.0207 REMARK 3 T13: 0.0169 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 4.8228 L22: 2.6806 REMARK 3 L33: 2.5659 L12: 3.4443 REMARK 3 L13: 0.5490 L23: 1.0985 REMARK 3 S TENSOR REMARK 3 S11: 0.1129 S12: -0.2073 S13: -0.2273 REMARK 3 S21: 0.1629 S22: 0.0230 S23: -0.3640 REMARK 3 S31: 0.0391 S32: 0.1233 S33: -0.1338 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 322 THROUGH 344 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4603 -12.8416 89.8990 REMARK 3 T TENSOR REMARK 3 T11: 0.1830 T22: 0.0682 REMARK 3 T33: 0.0960 T12: 0.0176 REMARK 3 T13: 0.0740 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 3.3944 L22: 3.4372 REMARK 3 L33: 1.9716 L12: 1.8635 REMARK 3 L13: 1.0464 L23: 0.6850 REMARK 3 S TENSOR REMARK 3 S11: 0.1706 S12: -0.2667 S13: 0.0463 REMARK 3 S21: 0.2009 S22: -0.1776 S23: 0.1684 REMARK 3 S31: -0.0156 S32: -0.1979 S33: 0.0629 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 345 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7436 -8.0776 79.4945 REMARK 3 T TENSOR REMARK 3 T11: 0.1726 T22: 0.1182 REMARK 3 T33: 0.1042 T12: 0.0403 REMARK 3 T13: -0.0138 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.0397 L22: 1.9427 REMARK 3 L33: 1.2188 L12: 0.5019 REMARK 3 L13: 0.0703 L23: 0.9832 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: 0.0735 S13: 0.0587 REMARK 3 S21: -0.2154 S22: -0.0826 S23: 0.2306 REMARK 3 S31: -0.2148 S32: -0.2884 S33: 0.0176 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 153 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7595 30.5789 95.7573 REMARK 3 T TENSOR REMARK 3 T11: 0.1642 T22: 0.0953 REMARK 3 T33: 0.1002 T12: -0.0105 REMARK 3 T13: 0.0159 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.5549 L22: 0.2777 REMARK 3 L33: 0.4517 L12: -0.3133 REMARK 3 L13: 0.3940 L23: 0.0027 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: -0.0662 S13: 0.0330 REMARK 3 S21: -0.0213 S22: -0.0011 S23: 0.0228 REMARK 3 S31: 0.0295 S32: -0.0636 S33: 0.0061 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 199 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.7630 22.8916 91.8565 REMARK 3 T TENSOR REMARK 3 T11: 0.1486 T22: 0.1066 REMARK 3 T33: 0.2374 T12: -0.0039 REMARK 3 T13: 0.0191 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 1.8215 L22: 2.4392 REMARK 3 L33: 2.1284 L12: -1.9711 REMARK 3 L13: 0.5300 L23: -0.3600 REMARK 3 S TENSOR REMARK 3 S11: -0.0511 S12: 0.0516 S13: -0.1882 REMARK 3 S21: 0.1653 S22: 0.1272 S23: -0.6458 REMARK 3 S31: 0.0800 S32: 0.1225 S33: -0.0603 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 216 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9353 15.3019 99.0174 REMARK 3 T TENSOR REMARK 3 T11: 0.2588 T22: 0.1169 REMARK 3 T33: 0.2500 T12: 0.0415 REMARK 3 T13: -0.0226 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 3.4223 L22: 2.9172 REMARK 3 L33: 2.9304 L12: -1.8291 REMARK 3 L13: -1.1240 L23: 0.0754 REMARK 3 S TENSOR REMARK 3 S11: -0.1395 S12: -0.1696 S13: -0.3967 REMARK 3 S21: 0.4616 S22: 0.1051 S23: -0.2245 REMARK 3 S31: 0.5734 S32: 0.2231 S33: 0.0395 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 239 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.0387 36.5979 95.3484 REMARK 3 T TENSOR REMARK 3 T11: 0.1930 T22: 0.1185 REMARK 3 T33: 0.0793 T12: -0.0468 REMARK 3 T13: 0.0274 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 1.2867 L22: 3.5988 REMARK 3 L33: 1.0651 L12: -1.2400 REMARK 3 L13: -0.7911 L23: -0.4026 REMARK 3 S TENSOR REMARK 3 S11: -0.0390 S12: -0.0844 S13: 0.0960 REMARK 3 S21: -0.0608 S22: 0.1791 S23: -0.3037 REMARK 3 S31: -0.3332 S32: 0.2699 S33: -0.0818 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 255 THROUGH 268 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.2690 41.8207 107.3749 REMARK 3 T TENSOR REMARK 3 T11: 0.2270 T22: 0.1481 REMARK 3 T33: 0.0866 T12: -0.0098 REMARK 3 T13: -0.0037 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 8.9425 L22: 3.7775 REMARK 3 L33: 6.9012 L12: 0.1675 REMARK 3 L13: -4.4454 L23: -0.2887 REMARK 3 S TENSOR REMARK 3 S11: -0.1388 S12: -0.4420 S13: -0.0260 REMARK 3 S21: 0.4435 S22: 0.0827 S23: -0.0552 REMARK 3 S31: -0.1522 S32: 0.6648 S33: 0.0382 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 269 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.9877 36.3000 87.9678 REMARK 3 T TENSOR REMARK 3 T11: 0.1077 T22: 0.0641 REMARK 3 T33: 0.0577 T12: -0.0109 REMARK 3 T13: -0.0035 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 1.2169 L22: 1.7872 REMARK 3 L33: 1.1932 L12: -0.0923 REMARK 3 L13: -0.4861 L23: -0.7004 REMARK 3 S TENSOR REMARK 3 S11: 0.0459 S12: -0.0039 S13: 0.0041 REMARK 3 S21: -0.0253 S22: -0.0096 S23: -0.0138 REMARK 3 S31: -0.0798 S32: 0.0442 S33: -0.0291 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 302 THROUGH 321 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4993 32.9633 82.0536 REMARK 3 T TENSOR REMARK 3 T11: 0.1071 T22: 0.1028 REMARK 3 T33: 0.0690 T12: -0.0218 REMARK 3 T13: 0.0077 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 4.2966 L22: 8.4940 REMARK 3 L33: 2.0524 L12: -3.2002 REMARK 3 L13: -0.0451 L23: 0.3361 REMARK 3 S TENSOR REMARK 3 S11: 0.1111 S12: 0.1150 S13: -0.0110 REMARK 3 S21: -0.1596 S22: -0.0511 S23: -0.1843 REMARK 3 S31: -0.1858 S32: 0.2459 S33: -0.0444 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 322 THROUGH 344 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7543 33.4650 81.0417 REMARK 3 T TENSOR REMARK 3 T11: 0.1415 T22: 0.0617 REMARK 3 T33: 0.0547 T12: -0.0366 REMARK 3 T13: -0.0268 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 7.2227 L22: 4.9968 REMARK 3 L33: 1.4083 L12: -4.7735 REMARK 3 L13: -2.2067 L23: 1.4026 REMARK 3 S TENSOR REMARK 3 S11: 0.0940 S12: 0.2550 S13: -0.1258 REMARK 3 S21: -0.0838 S22: -0.1687 S23: 0.1016 REMARK 3 S31: 0.0779 S32: -0.0790 S33: 0.0911 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 345 THROUGH 371 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3216 32.1004 83.4192 REMARK 3 T TENSOR REMARK 3 T11: 0.1164 T22: 0.0828 REMARK 3 T33: 0.0816 T12: -0.0144 REMARK 3 T13: 0.0138 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 2.2026 L22: 2.9641 REMARK 3 L33: 2.2412 L12: -1.0970 REMARK 3 L13: -0.5799 L23: 0.6635 REMARK 3 S TENSOR REMARK 3 S11: 0.0850 S12: 0.1673 S13: -0.0117 REMARK 3 S21: -0.2268 S22: -0.0987 S23: 0.1166 REMARK 3 S31: 0.0647 S32: -0.1401 S33: 0.0224 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 372 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9722 27.2922 96.5684 REMARK 3 T TENSOR REMARK 3 T11: 0.1444 T22: 0.1265 REMARK 3 T33: 0.1236 T12: -0.0298 REMARK 3 T13: 0.0276 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 2.6077 L22: 3.3127 REMARK 3 L33: 2.1633 L12: -2.3291 REMARK 3 L13: 1.4413 L23: -1.8485 REMARK 3 S TENSOR REMARK 3 S11: -0.1900 S12: -0.2606 S13: -0.1762 REMARK 3 S21: 0.1521 S22: 0.2682 S23: 0.1908 REMARK 3 S31: 0.0719 S32: -0.3342 S33: -0.0999 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5B5Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1300000566. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50612 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 77.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM BICINE PH 9.0, 10% PEG20000, 2% REMARK 280 1,4DIOXANE, 5% DMSO, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.78650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE B 159 REMARK 465 GLU B 160 REMARK 465 GLY B 340 REMARK 465 SER B 341 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 220 CG CD CE NZ REMARK 470 LYS A 229 CB CG CD CE NZ REMARK 470 GLU A 230 CG CD OE1 OE2 REMARK 470 SER A 372 OG REMARK 470 GLN A 384 CG CD OE1 NE2 REMARK 470 GLN A 391 CG CD OE1 NE2 REMARK 470 GLN B 157 CG CD OE1 NE2 REMARK 470 LYS B 220 CG CD CE NZ REMARK 470 ARG B 339 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 684 O HOH B 698 2.04 REMARK 500 O HOH A 702 O HOH A 752 2.09 REMARK 500 O HOH A 525 O HOH A 680 2.12 REMARK 500 O HOH B 761 O HOH B 825 2.15 REMARK 500 O HOH A 721 O HOH A 731 2.17 REMARK 500 O HOH B 766 O HOH B 834 2.18 REMARK 500 O HOH B 652 O HOH B 840 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER B 310 OE1 GLU B 374 1655 2.13 REMARK 500 O HOH B 824 O HOH B 829 1455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 198 12.42 -142.62 REMARK 500 TYR A 295 -53.61 72.46 REMARK 500 ASN A 296 34.88 -146.40 REMARK 500 ASP A 359 97.85 -161.45 REMARK 500 ASN B 198 12.48 -151.38 REMARK 500 TYR B 295 -53.95 72.23 REMARK 500 ASN B 296 36.77 -147.26 REMARK 500 ASP B 359 100.00 -161.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 767 DISTANCE = 5.84 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 501 DBREF1 5B5Q A 159 401 UNP A0A0E9AT26_CHLTH DBREF2 5B5Q A A0A0E9AT26 159 401 DBREF 5B5Q B 155 401 UNP K0GC10 K0GC10_CHLTH 155 401 SEQADV 5B5Q GLY B 153 UNP K0GC10 EXPRESSION TAG SEQADV 5B5Q PRO B 154 UNP K0GC10 EXPRESSION TAG SEQRES 1 A 243 ILE GLU ALA LEU VAL PRO ALA TRP ASP SER ASP ILE ILE SEQRES 2 A 243 PHE LYS CYS LEU CYS TYR PHE HIS THR LEU TYR PRO GLY SEQRES 3 A 243 LEU ILE PRO LEU GLU THR PHE PRO PRO ALA THR ILE PHE SEQRES 4 A 243 ASN PHE LYS GLN LYS ILE ILE SER ILE LEU GLU ASP LYS SEQRES 5 A 243 LYS ALA VAL LEU ARG GLY GLU PRO ILE LYS GLY PRO LEU SEQRES 6 A 243 PRO ILE CYS CYS SER LYS GLU ASN TYR ARG ARG HIS LEU SEQRES 7 A 243 GLN ARG THR THR LEU LEU PRO VAL PHE MET TRP TYR HIS SEQRES 8 A 243 PRO THR PRO LYS THR LEU SER ASP THR MET GLN THR MET SEQRES 9 A 243 LYS GLN LEU ALA ILE LYS GLY SER VAL GLY ALA SER HIS SEQRES 10 A 243 TRP LEU LEU VAL ILE VAL ASP ILE GLN ALA ARG ARG LEU SEQRES 11 A 243 VAL TYR PHE ASP SER LEU TYR ASN TYR VAL MET PRO PRO SEQRES 12 A 243 GLU ASN MET LYS LYS GLU LEU GLN SER PHE ALA GLN GLN SEQRES 13 A 243 LEU ASP GLN VAL TYR PRO ALA TYR ASP SER LYS LYS PHE SEQRES 14 A 243 SER VAL LYS ILE ALA ALA LYS GLU VAL ILE GLN ARG GLY SEQRES 15 A 243 SER GLY SER SER CYS GLY ALA TRP CYS CYS GLN PHE LEU SEQRES 16 A 243 HIS TRP TYR LEU LYS ASP PRO LEU THR ASP ALA LEU ASN SEQRES 17 A 243 ASP LEU PRO VAL ASP SER VAL GLU ARG HIS GLU ASN LEU SEQRES 18 A 243 ALA SER PHE VAL GLN ALA CYS GLU ALA ALA VAL GLN ASP SEQRES 19 A 243 LEU PRO GLU LEU SER TRP PRO GLU ALA SEQRES 1 B 249 GLY PRO ARG ARG GLN THR ILE GLU ALA LEU VAL PRO ALA SEQRES 2 B 249 TRP ASP SER ASP ILE ILE PHE LYS CYS LEU CYS TYR PHE SEQRES 3 B 249 HIS THR LEU TYR PRO GLY LEU ILE PRO LEU GLU THR PHE SEQRES 4 B 249 PRO PRO ALA THR ILE PHE ASN PHE LYS GLN LYS ILE ILE SEQRES 5 B 249 SER ILE LEU GLU ASP LYS LYS ALA VAL LEU ARG GLY GLU SEQRES 6 B 249 PRO ILE LYS GLY PRO LEU PRO ILE CYS CYS SER LYS GLU SEQRES 7 B 249 ASN TYR ARG ARG HIS LEU GLN ARG THR THR LEU LEU PRO SEQRES 8 B 249 VAL PHE MET TRP TYR HIS PRO THR PRO LYS THR LEU SER SEQRES 9 B 249 ASP THR MET GLN THR MET LYS GLN LEU ALA ILE LYS GLY SEQRES 10 B 249 SER VAL GLY ALA SER HIS TRP LEU LEU VAL ILE VAL ASP SEQRES 11 B 249 ILE GLN ALA ARG ARG LEU VAL TYR PHE ASP SER LEU TYR SEQRES 12 B 249 ASN TYR VAL MET PRO PRO GLU ASN MET LYS LYS GLU LEU SEQRES 13 B 249 GLN SER PHE ALA GLN GLN LEU ASP GLN VAL TYR PRO ALA SEQRES 14 B 249 TYR ASP SER LYS LYS PHE SER VAL LYS ILE ALA ALA LYS SEQRES 15 B 249 GLU VAL ILE GLN ARG GLY SER GLY SER SER CYS GLY ALA SEQRES 16 B 249 TRP CYS CYS GLN PHE LEU HIS TRP TYR LEU LYS ASP PRO SEQRES 17 B 249 LEU THR ASP ALA LEU ASN ASP LEU PRO VAL ASP SER VAL SEQRES 18 B 249 GLU ARG HIS GLU ASN LEU ALA SER PHE VAL GLN ALA CYS SEQRES 19 B 249 GLU ALA ALA VAL GLN ASP LEU PRO GLU LEU SER TRP PRO SEQRES 20 B 249 GLU ALA HET CL B 501 1 HETNAM CL CHLORIDE ION FORMUL 3 CL CL 1- FORMUL 4 HOH *551(H2 O) HELIX 1 AA1 ASP A 167 TYR A 182 1 16 HELIX 2 AA2 ASN A 198 ARG A 215 1 18 HELIX 3 AA3 SER A 228 THR A 239 1 12 HELIX 4 AA4 THR A 254 GLY A 269 1 16 HELIX 5 AA5 PRO A 300 TYR A 319 1 20 HELIX 6 AA6 SER A 344 ASP A 359 1 16 HELIX 7 AA7 ASP A 363 LEU A 368 5 6 HELIX 8 AA8 ASP A 371 VAL A 390 1 20 HELIX 9 AA9 ASP B 167 TYR B 182 1 16 HELIX 10 AB1 ASN B 198 ARG B 215 1 18 HELIX 11 AB2 SER B 228 THR B 239 1 12 HELIX 12 AB3 THR B 254 GLY B 269 1 16 HELIX 13 AB4 PRO B 300 TYR B 319 1 20 HELIX 14 AB5 SER B 344 ASP B 359 1 16 HELIX 15 AB6 ALA B 364 LEU B 368 5 5 HELIX 16 AB7 ASP B 371 GLN B 391 1 21 SHEET 1 AA1 4 LEU A 241 TYR A 248 0 SHEET 2 AA1 4 HIS A 275 ASP A 282 -1 O HIS A 275 N TYR A 248 SHEET 3 AA1 4 ARG A 287 PHE A 291 -1 O ARG A 287 N ASP A 282 SHEET 4 AA1 4 SER A 328 ILE A 331 1 O SER A 328 N LEU A 288 SHEET 1 AA2 4 LEU B 241 TYR B 248 0 SHEET 2 AA2 4 HIS B 275 ASP B 282 -1 O LEU B 277 N MET B 246 SHEET 3 AA2 4 ARG B 287 PHE B 291 -1 O ARG B 287 N ASP B 282 SHEET 4 AA2 4 SER B 328 ILE B 331 1 O SER B 328 N LEU B 288 CISPEP 1 PHE A 191 PRO A 192 0 -5.77 CISPEP 2 GLY A 221 PRO A 222 0 0.10 CISPEP 3 PHE B 191 PRO B 192 0 -6.50 SITE 1 AC1 2 PHE B 172 THR B 190 CRYST1 39.100 77.573 68.948 90.00 96.43 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025575 0.000000 0.002884 0.00000 SCALE2 0.000000 0.012891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014596 0.00000