HEADER TRANSCRIPTION 07-JUN-16 5B7D TITLE OXYR2 E204G MUTANT REGULATORY DOMAIN FROM VIBRIO VULNIFICUS (SULFATE- TITLE 2 BOUND) COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSR FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 86-301; COMPND 5 SYNONYM: OXYR2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO VULNIFICUS; SOURCE 3 ORGANISM_TAXID: 672; SOURCE 4 STRAIN: MO6-24/O; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS LYSR-TYPE TRANSCRIPTION REGULATOR, LTTR, OXYR, H2O2, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR I.JO,N.-C.HA REVDAT 3 08-NOV-23 5B7D 1 REMARK REVDAT 2 10-MAY-17 5B7D 1 JRNL REVDAT 1 15-MAR-17 5B7D 0 JRNL AUTH I.JO,D.KIM,Y.-J.BANG,J.AHN,S.H.CHOI,N.-C.HA JRNL TITL THE HYDROGEN PEROXIDE HYPERSENSITIVITY OF OXYR2 IN VIBRIO JRNL TITL 2 VULNIFICUS DEPENDS ON CONFORMATIONAL CONSTRAINTS JRNL REF J. BIOL. CHEM. V. 292 7223 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28264933 JRNL DOI 10.1074/JBC.M116.743765 REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.500 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 72860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3644 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7575 - 4.4864 1.00 2917 127 0.1547 0.1878 REMARK 3 2 4.4864 - 3.5678 1.00 2789 139 0.1322 0.1488 REMARK 3 3 3.5678 - 3.1188 1.00 2750 150 0.1466 0.1675 REMARK 3 4 3.1188 - 2.8346 1.00 2760 145 0.1524 0.1760 REMARK 3 5 2.8346 - 2.6319 1.00 2708 164 0.1574 0.1752 REMARK 3 6 2.6319 - 2.4770 1.00 2703 164 0.1522 0.1966 REMARK 3 7 2.4770 - 2.3532 1.00 2723 136 0.1470 0.1626 REMARK 3 8 2.3532 - 2.2509 1.00 2751 127 0.1445 0.1663 REMARK 3 9 2.2509 - 2.1644 1.00 2705 156 0.1406 0.1641 REMARK 3 10 2.1644 - 2.0898 1.00 2700 147 0.1422 0.1726 REMARK 3 11 2.0898 - 2.0245 1.00 2691 159 0.1507 0.1937 REMARK 3 12 2.0245 - 1.9667 1.00 2697 139 0.1509 0.1657 REMARK 3 13 1.9667 - 1.9149 1.00 2708 145 0.1544 0.1729 REMARK 3 14 1.9149 - 1.8683 1.00 2696 145 0.1532 0.1869 REMARK 3 15 1.8683 - 1.8258 1.00 2679 139 0.1678 0.2044 REMARK 3 16 1.8258 - 1.7870 1.00 2702 148 0.1741 0.2099 REMARK 3 17 1.7870 - 1.7513 1.00 2686 143 0.1853 0.1952 REMARK 3 18 1.7513 - 1.7182 1.00 2695 136 0.1823 0.2191 REMARK 3 19 1.7182 - 1.6876 0.99 2680 150 0.1825 0.1961 REMARK 3 20 1.6876 - 1.6590 0.99 2678 122 0.1897 0.2398 REMARK 3 21 1.6590 - 1.6322 0.99 2651 155 0.1959 0.2440 REMARK 3 22 1.6322 - 1.6071 0.98 2660 133 0.2071 0.2371 REMARK 3 23 1.6071 - 1.5835 0.96 2564 131 0.2052 0.2301 REMARK 3 24 1.5835 - 1.5612 0.93 2520 139 0.2079 0.2320 REMARK 3 25 1.5612 - 1.5401 0.87 2377 95 0.2081 0.2402 REMARK 3 26 1.5401 - 1.5201 0.76 2026 110 0.2012 0.2269 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3520 REMARK 3 ANGLE : 0.964 4807 REMARK 3 CHIRALITY : 0.066 570 REMARK 3 PLANARITY : 0.006 633 REMARK 3 DIHEDRAL : 4.030 3331 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9473 -6.3407 16.9510 REMARK 3 T TENSOR REMARK 3 T11: 0.0891 T22: 0.1757 REMARK 3 T33: 0.1463 T12: -0.0189 REMARK 3 T13: 0.0016 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 4.7851 L22: 0.8666 REMARK 3 L33: 0.2009 L12: -2.0078 REMARK 3 L13: 0.9715 L23: -0.4128 REMARK 3 S TENSOR REMARK 3 S11: 0.0975 S12: 0.4556 S13: 0.2191 REMARK 3 S21: -0.0063 S22: -0.1500 S23: -0.1929 REMARK 3 S31: 0.0113 S32: 0.1730 S33: 0.0364 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6268 -5.9872 13.1672 REMARK 3 T TENSOR REMARK 3 T11: 0.0957 T22: 0.0658 REMARK 3 T33: 0.0613 T12: -0.0019 REMARK 3 T13: 0.0014 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.1391 L22: 0.4157 REMARK 3 L33: 0.8114 L12: 0.2109 REMARK 3 L13: -0.0260 L23: -0.0427 REMARK 3 S TENSOR REMARK 3 S11: -0.0200 S12: 0.0001 S13: 0.0005 REMARK 3 S21: -0.0470 S22: 0.0020 S23: 0.0021 REMARK 3 S31: -0.0477 S32: 0.0480 S33: 0.0181 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0707 -4.9715 11.0065 REMARK 3 T TENSOR REMARK 3 T11: 0.0931 T22: 0.1118 REMARK 3 T33: 0.1077 T12: 0.0137 REMARK 3 T13: -0.0244 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.4392 L22: 0.9423 REMARK 3 L33: 3.0833 L12: -0.8253 REMARK 3 L13: 0.1006 L23: 0.0161 REMARK 3 S TENSOR REMARK 3 S11: 0.0324 S12: 0.1486 S13: -0.1544 REMARK 3 S21: -0.0831 S22: -0.0283 S23: 0.1741 REMARK 3 S31: -0.1517 S32: -0.3159 S33: 0.0433 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 231 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6580 -10.6359 11.8419 REMARK 3 T TENSOR REMARK 3 T11: 0.0988 T22: 0.0828 REMARK 3 T33: 0.0664 T12: -0.0036 REMARK 3 T13: -0.0077 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.8294 L22: 0.5138 REMARK 3 L33: 0.6911 L12: 0.2260 REMARK 3 L13: -0.4252 L23: -0.2402 REMARK 3 S TENSOR REMARK 3 S11: -0.0539 S12: 0.0876 S13: -0.0678 REMARK 3 S21: -0.0836 S22: 0.0075 S23: -0.0425 REMARK 3 S31: 0.0279 S32: -0.0179 S33: 0.0473 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 83 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0709 -41.5099 17.3913 REMARK 3 T TENSOR REMARK 3 T11: 0.0989 T22: 0.2237 REMARK 3 T33: 0.1759 T12: -0.0295 REMARK 3 T13: 0.0120 T23: -0.0471 REMARK 3 L TENSOR REMARK 3 L11: 3.5781 L22: 0.8970 REMARK 3 L33: -0.0022 L12: -1.7892 REMARK 3 L13: 0.1018 L23: -0.0521 REMARK 3 S TENSOR REMARK 3 S11: 0.0746 S12: 0.3096 S13: -0.4198 REMARK 3 S21: 0.0167 S22: -0.0987 S23: 0.2100 REMARK 3 S31: -0.0155 S32: -0.1681 S33: -0.0209 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 106 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3486 -41.9069 14.1991 REMARK 3 T TENSOR REMARK 3 T11: 0.0824 T22: 0.0856 REMARK 3 T33: 0.0745 T12: -0.0144 REMARK 3 T13: -0.0019 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.1210 L22: 0.6907 REMARK 3 L33: 0.9281 L12: 0.4647 REMARK 3 L13: -0.1101 L23: -0.0404 REMARK 3 S TENSOR REMARK 3 S11: -0.0512 S12: 0.0710 S13: -0.0259 REMARK 3 S21: -0.0613 S22: 0.0307 S23: 0.0227 REMARK 3 S31: 0.0943 S32: -0.1067 S33: 0.0220 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 181 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5207 -42.8200 9.3607 REMARK 3 T TENSOR REMARK 3 T11: 0.1228 T22: 0.1022 REMARK 3 T33: 0.1067 T12: 0.0313 REMARK 3 T13: 0.0346 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 2.8461 L22: 0.2482 REMARK 3 L33: 2.9015 L12: -0.6350 REMARK 3 L13: -0.9689 L23: -0.2553 REMARK 3 S TENSOR REMARK 3 S11: 0.0795 S12: 0.0946 S13: -0.0180 REMARK 3 S21: -0.0869 S22: -0.0536 S23: -0.0513 REMARK 3 S31: 0.1443 S32: 0.2491 S33: 0.0311 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 231 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1421 -37.1421 11.8548 REMARK 3 T TENSOR REMARK 3 T11: 0.0694 T22: 0.0786 REMARK 3 T33: 0.0573 T12: -0.0061 REMARK 3 T13: 0.0083 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.1991 L22: 0.6774 REMARK 3 L33: 0.7141 L12: 0.3488 REMARK 3 L13: 0.2435 L23: 0.0811 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: 0.1497 S13: 0.0562 REMARK 3 S21: -0.0738 S22: 0.0082 S23: 0.0717 REMARK 3 S31: 0.0646 S32: -0.0292 S33: 0.0309 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5B7D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1300000667. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74251 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5B6U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M SODIUM REMARK 280 CITRATE (PH 5.6), 11% PEG 4000, 2MM TCEP, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.32750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.32750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.35250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 68.61900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.35250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 68.61900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.32750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.35250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 68.61900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.32750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.35250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 68.61900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 48.32750 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 48.32750 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 88 REMARK 465 SER A 89 REMARK 465 LEU A 90 REMARK 465 CYS A 91 REMARK 465 GLN A 92 REMARK 465 GLY A 93 REMARK 465 ASP A 94 REMARK 465 GLY B 88 REMARK 465 SER B 89 REMARK 465 LEU B 90 REMARK 465 CYS B 91 REMARK 465 GLN B 92 REMARK 465 GLY B 93 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO B 282 O HOH B 501 2.08 REMARK 500 O HOH A 631 O HOH A 636 2.10 REMARK 500 O HOH A 515 O HOH A 692 2.15 REMARK 500 OG SER B 177 O HOH B 502 2.17 REMARK 500 O HOH A 505 O HOH A 636 2.17 REMARK 500 O HOH A 582 O HOH A 741 2.18 REMARK 500 OG SER A 287 O HOH A 501 2.18 REMARK 500 O HOH A 565 O HOH A 588 2.18 REMARK 500 O HOH B 506 O HOH B 667 2.18 REMARK 500 O HOH B 675 O HOH B 716 2.19 REMARK 500 O HOH A 550 O HOH A 663 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 692 O HOH B 744 5555 2.10 REMARK 500 O HOH A 757 O HOH B 704 3555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 111 -74.96 -106.85 REMARK 500 PHE A 111 -74.37 -106.85 REMARK 500 GLN A 270 176.33 -56.66 REMARK 500 GLN A 271 97.62 -64.91 REMARK 500 PHE B 111 -73.64 -107.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 818 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 819 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH B 861 DISTANCE = 5.81 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5B70 RELATED DB: PDB REMARK 900 RELATED ID: 5B7H RELATED DB: PDB REMARK 900 RELATED ID: 5X0Q RELATED DB: PDB REMARK 900 RELATED ID: 5X0V RELATED DB: PDB DBREF1 5B7D A 86 301 UNP A0A087I947_VIBVL DBREF2 5B7D A A0A087I947 86 301 DBREF1 5B7D B 86 301 UNP A0A087I947_VIBVL DBREF2 5B7D B A0A087I947 86 301 SEQADV 5B7D GLY A 83 UNP A0A087I94 EXPRESSION TAG SEQADV 5B7D ALA A 84 UNP A0A087I94 EXPRESSION TAG SEQADV 5B7D MET A 85 UNP A0A087I94 EXPRESSION TAG SEQADV 5B7D GLY A 204 UNP A0A087I94 GLU 204 ENGINEERED MUTATION SEQADV 5B7D GLY B 83 UNP A0A087I94 EXPRESSION TAG SEQADV 5B7D ALA B 84 UNP A0A087I94 EXPRESSION TAG SEQADV 5B7D MET B 85 UNP A0A087I94 EXPRESSION TAG SEQADV 5B7D GLY B 204 UNP A0A087I94 GLU 204 ENGINEERED MUTATION SEQRES 1 A 219 GLY ALA MET GLU LEU GLY SER LEU CYS GLN GLY ASP SER SEQRES 2 A 219 MET GLN GLY GLN LEU LYS LEU GLY CYS ILE PRO THR ILE SEQRES 3 A 219 ALA PRO PHE LEU LEU CYS ASP LEU VAL GLN GLU ILE ASN SEQRES 4 A 219 GLN ARG PHE PRO GLN LEU ASN LEU LEU LEU ARG GLU ASP SEQRES 5 A 219 THR THR THR ASN LEU LEU THR ALA LEU ARG HIS GLY GLU SEQRES 6 A 219 LEU ASP VAL LEU ILE LEU ALA LEU PRO VAL GLU ILE ASP SEQRES 7 A 219 GLY MET GLU SER ARG VAL VAL GLY GLN ASP PRO PHE LYS SEQRES 8 A 219 MET VAL ILE SER ARG HIS GLN ALA GLY ALA ILE LYS VAL SEQRES 9 A 219 PRO ILE LYS TYR ASP ASP LEU PRO ASP GLU SER VAL PHE SEQRES 10 A 219 LEU LEU GLU LYS GLY HIS CYS LEU THR GLU HIS ALA VAL SEQRES 11 A 219 SER ALA CYS LYS LEU THR ASP LYS GLU LYS ILE ASN PRO SEQRES 12 A 219 PHE SER ALA THR SER LEU HIS THR LEU VAL GLN MET VAL SEQRES 13 A 219 ALA ASN GLY LEU GLY THR THR PHE ILE PRO GLN MET ALA SEQRES 14 A 219 ILE ASP HIS GLY LEU LEU ASP ASN GLN ASN LEU VAL VAL SEQRES 15 A 219 ILE GLU PRO PRO GLY GLN GLN ALA TYR ARG ASP ILE GLY SEQRES 16 A 219 LEU VAL TRP ARG PRO SER SER SER ARG SER LYS THR PHE SEQRES 17 A 219 ASN GLN LEU ALA GLU VAL VAL SER GLU LEU LEU SEQRES 1 B 219 GLY ALA MET GLU LEU GLY SER LEU CYS GLN GLY ASP SER SEQRES 2 B 219 MET GLN GLY GLN LEU LYS LEU GLY CYS ILE PRO THR ILE SEQRES 3 B 219 ALA PRO PHE LEU LEU CYS ASP LEU VAL GLN GLU ILE ASN SEQRES 4 B 219 GLN ARG PHE PRO GLN LEU ASN LEU LEU LEU ARG GLU ASP SEQRES 5 B 219 THR THR THR ASN LEU LEU THR ALA LEU ARG HIS GLY GLU SEQRES 6 B 219 LEU ASP VAL LEU ILE LEU ALA LEU PRO VAL GLU ILE ASP SEQRES 7 B 219 GLY MET GLU SER ARG VAL VAL GLY GLN ASP PRO PHE LYS SEQRES 8 B 219 MET VAL ILE SER ARG HIS GLN ALA GLY ALA ILE LYS VAL SEQRES 9 B 219 PRO ILE LYS TYR ASP ASP LEU PRO ASP GLU SER VAL PHE SEQRES 10 B 219 LEU LEU GLU LYS GLY HIS CYS LEU THR GLU HIS ALA VAL SEQRES 11 B 219 SER ALA CYS LYS LEU THR ASP LYS GLU LYS ILE ASN PRO SEQRES 12 B 219 PHE SER ALA THR SER LEU HIS THR LEU VAL GLN MET VAL SEQRES 13 B 219 ALA ASN GLY LEU GLY THR THR PHE ILE PRO GLN MET ALA SEQRES 14 B 219 ILE ASP HIS GLY LEU LEU ASP ASN GLN ASN LEU VAL VAL SEQRES 15 B 219 ILE GLU PRO PRO GLY GLN GLN ALA TYR ARG ASP ILE GLY SEQRES 16 B 219 LEU VAL TRP ARG PRO SER SER SER ARG SER LYS THR PHE SEQRES 17 B 219 ASN GLN LEU ALA GLU VAL VAL SER GLU LEU LEU HET SO4 A 401 5 HET SO4 B 401 5 HET SO4 B 402 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *680(H2 O) HELIX 1 AA1 ILE A 108 PHE A 124 1 17 HELIX 2 AA2 THR A 135 HIS A 145 1 11 HELIX 3 AA3 HIS A 179 ALA A 181 5 3 HELIX 4 AA4 LYS A 189 LEU A 193 5 5 HELIX 5 AA5 HIS A 205 CYS A 215 1 11 HELIX 6 AA6 ASP A 219 ILE A 223 5 5 HELIX 7 AA7 SER A 230 ASN A 240 1 11 HELIX 8 AA8 GLN A 249 HIS A 254 1 6 HELIX 9 AA9 ARG A 286 LEU A 300 1 15 HELIX 10 AB1 ILE B 108 PHE B 124 1 17 HELIX 11 AB2 THR B 135 HIS B 145 1 11 HELIX 12 AB3 HIS B 179 ALA B 181 5 3 HELIX 13 AB4 LYS B 189 LEU B 193 5 5 HELIX 14 AB5 HIS B 205 CYS B 215 1 11 HELIX 15 AB6 ASP B 219 ILE B 223 5 5 HELIX 16 AB7 SER B 230 ASN B 240 1 11 HELIX 17 AB8 GLN B 249 HIS B 254 1 6 HELIX 18 AB9 ARG B 286 LEU B 300 1 15 SHEET 1 AA1 6 LEU A 127 GLU A 133 0 SHEET 2 AA1 6 GLY A 98 CYS A 104 1 N LEU A 102 O LEU A 130 SHEET 3 AA1 6 VAL A 150 LEU A 155 1 O ILE A 152 N GLY A 103 SHEET 4 AA1 6 TYR A 273 TRP A 280 -1 O VAL A 279 N LEU A 151 SHEET 5 AA1 6 GLU A 163 SER A 177 -1 N GLU A 163 O TRP A 280 SHEET 6 AA1 6 THR A 245 PRO A 248 -1 O ILE A 247 N LYS A 173 SHEET 1 AA2 6 LEU A 127 GLU A 133 0 SHEET 2 AA2 6 GLY A 98 CYS A 104 1 N LEU A 102 O LEU A 130 SHEET 3 AA2 6 VAL A 150 LEU A 155 1 O ILE A 152 N GLY A 103 SHEET 4 AA2 6 TYR A 273 TRP A 280 -1 O VAL A 279 N LEU A 151 SHEET 5 AA2 6 GLU A 163 SER A 177 -1 N GLU A 163 O TRP A 280 SHEET 6 AA2 6 LEU A 262 ILE A 265 -1 O VAL A 263 N ILE A 176 SHEET 1 AA3 6 LEU B 127 GLU B 133 0 SHEET 2 AA3 6 GLY B 98 CYS B 104 1 N GLY B 98 O ASN B 128 SHEET 3 AA3 6 VAL B 150 LEU B 155 1 O ILE B 152 N GLY B 103 SHEET 4 AA3 6 TYR B 273 TRP B 280 -1 O GLY B 277 N LEU B 153 SHEET 5 AA3 6 GLU B 163 SER B 177 -1 N VAL B 167 O ILE B 276 SHEET 6 AA3 6 THR B 245 PRO B 248 -1 O ILE B 247 N LYS B 173 SHEET 1 AA4 6 LEU B 127 GLU B 133 0 SHEET 2 AA4 6 GLY B 98 CYS B 104 1 N GLY B 98 O ASN B 128 SHEET 3 AA4 6 VAL B 150 LEU B 155 1 O ILE B 152 N GLY B 103 SHEET 4 AA4 6 TYR B 273 TRP B 280 -1 O GLY B 277 N LEU B 153 SHEET 5 AA4 6 GLU B 163 SER B 177 -1 N VAL B 167 O ILE B 276 SHEET 6 AA4 6 LEU B 262 ILE B 265 -1 O ILE B 265 N MET B 174 CISPEP 1 LEU A 155 PRO A 156 0 3.88 CISPEP 2 VAL A 186 PRO A 187 0 0.48 CISPEP 3 LEU B 155 PRO B 156 0 4.86 CISPEP 4 VAL B 186 PRO B 187 0 2.30 SITE 1 AC1 9 ILE A 105 PRO A 106 THR A 107 HIS A 205 SITE 2 AC1 9 CYS A 206 LEU A 207 HOH A 518 HOH A 603 SITE 3 AC1 9 HOH A 697 SITE 1 AC2 6 ARG A 281 SER A 284 SER A 285 HOH A 571 SITE 2 AC2 6 ARG B 144 HOH B 552 SITE 1 AC3 9 ILE B 105 PRO B 106 THR B 107 HIS B 205 SITE 2 AC3 9 CYS B 206 LEU B 207 HOH B 515 HOH B 629 SITE 3 AC3 9 HOH B 729 CRYST1 72.705 137.238 96.655 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013754 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007287 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010346 0.00000