data_5B8D # _entry.id 5B8D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5B8D pdb_00005b8d 10.2210/pdb5b8d/pdb WWPDB D_1300000718 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5kh3 unspecified PDB . 5kh7 unspecified PDB . 5kh9 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5B8D _pdbx_database_status.recvd_initial_deposition_date 2016-06-14 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Harding, R.J.' 1 'Tempel, W.' 2 'Collins, P.' 3 'Pearce, N.' 4 'Brandao-Neto, J.' 5 'Douangamath, A.' 6 'Ravichandran, M.' 7 'Schapira, M.' 8 'Bountra, C.' 9 'Edwards, A.M.' 10 'von Delft, F.' 11 'Santhakumar, V.' 12 'Arrowsmith, C.M.' 13 'Structural Genomics Consortium (SGC)' 14 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Med. Chem.' _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 1520-4804 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 60 _citation.language ? _citation.page_first 9090 _citation.page_last 9096 _citation.title 'Small Molecule Antagonists of the Interaction between the Histone Deacetylase 6 Zinc-Finger Domain and Ubiquitin.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.7b00933 _citation.pdbx_database_id_PubMed 29019676 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Harding, R.J.' 1 0000-0002-1134-391X primary 'Ferreira de Freitas, R.' 2 0000-0001-6195-4236 primary 'Collins, P.' 3 0000-0002-6265-9922 primary 'Franzoni, I.' 4 0000-0001-8110-6218 primary 'Ravichandran, M.' 5 ? primary 'Ouyang, H.' 6 ? primary 'Juarez-Ornelas, K.A.' 7 ? primary 'Lautens, M.' 8 ? primary 'Schapira, M.' 9 0000-0002-1047-3309 primary 'von Delft, F.' 10 ? primary 'Santhakumar, V.' 11 ? primary 'Arrowsmith, C.H.' 12 0000-0002-4971-3250 # _cell.entry_id 5B8D _cell.length_a 41.434 _cell.length_b 44.157 _cell.length_c 56.549 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5B8D _symmetry.Int_Tables_number 19 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histone deacetylase 6' 11932.607 1 3.5.1.98 ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 3 non-polymer syn 'FORMIC ACID' 46.025 2 ? ? ? ? 4 non-polymer syn '~{N}-(4-methyl-1,3-thiazol-2-yl)ethanamide' 156.206 1 ? ? ? ? 5 non-polymer syn 'UNKNOWN ATOM OR ION' ? 36 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 water nat water 18.015 79 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name HD6 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYC QAYVHHQALLDVKNIAHQNKFGEDMPH ; _entity_poly.pdbx_seq_one_letter_code_can ;GSPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYC QAYVHHQALLDVKNIAHQNKFGEDMPH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PRO n 1 4 LEU n 1 5 PRO n 1 6 TRP n 1 7 CYS n 1 8 PRO n 1 9 HIS n 1 10 LEU n 1 11 VAL n 1 12 ALA n 1 13 VAL n 1 14 CYS n 1 15 PRO n 1 16 ILE n 1 17 PRO n 1 18 ALA n 1 19 ALA n 1 20 GLY n 1 21 LEU n 1 22 ASP n 1 23 VAL n 1 24 THR n 1 25 GLN n 1 26 PRO n 1 27 CYS n 1 28 GLY n 1 29 ASP n 1 30 CYS n 1 31 GLY n 1 32 THR n 1 33 ILE n 1 34 GLN n 1 35 GLU n 1 36 ASN n 1 37 TRP n 1 38 VAL n 1 39 CYS n 1 40 LEU n 1 41 SER n 1 42 CYS n 1 43 TYR n 1 44 GLN n 1 45 VAL n 1 46 TYR n 1 47 CYS n 1 48 GLY n 1 49 ARG n 1 50 TYR n 1 51 ILE n 1 52 ASN n 1 53 GLY n 1 54 HIS n 1 55 MET n 1 56 LEU n 1 57 GLN n 1 58 HIS n 1 59 HIS n 1 60 GLY n 1 61 ASN n 1 62 SER n 1 63 GLY n 1 64 HIS n 1 65 PRO n 1 66 LEU n 1 67 VAL n 1 68 LEU n 1 69 SER n 1 70 TYR n 1 71 ILE n 1 72 ASP n 1 73 LEU n 1 74 SER n 1 75 ALA n 1 76 TRP n 1 77 CYS n 1 78 TYR n 1 79 TYR n 1 80 CYS n 1 81 GLN n 1 82 ALA n 1 83 TYR n 1 84 VAL n 1 85 HIS n 1 86 HIS n 1 87 GLN n 1 88 ALA n 1 89 LEU n 1 90 LEU n 1 91 ASP n 1 92 VAL n 1 93 LYS n 1 94 ASN n 1 95 ILE n 1 96 ALA n 1 97 HIS n 1 98 GLN n 1 99 ASN n 1 100 LYS n 1 101 PHE n 1 102 GLY n 1 103 GLU n 1 104 ASP n 1 105 MET n 1 106 PRO n 1 107 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 107 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HDAC6, KIAA0901, JM21' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) codon plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-lic _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HDAC6_HUMAN _struct_ref.pdbx_db_accession Q9UBN7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQA YVHHQALLDVKNIAHQNKFGEDMPH ; _struct_ref.pdbx_align_begin 1109 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5B8D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 107 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UBN7 _struct_ref_seq.db_align_beg 1109 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1213 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1109 _struct_ref_seq.pdbx_auth_seq_align_end 1213 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5B8D GLY A 1 ? UNP Q9UBN7 ? ? 'expression tag' 1107 1 1 5B8D SER A 2 ? UNP Q9UBN7 ? ? 'expression tag' 1108 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6T4 non-polymer . '~{N}-(4-methyl-1,3-thiazol-2-yl)ethanamide' ? 'C6 H8 N2 O S' 156.206 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5B8D _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2M Na-formate, 0.2M Na-acetate pH4.6, 5% ethylene glycol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-09-30 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92819 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.92819 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.d_resolution_high 1.050 _reflns.d_resolution_low 34.80 _reflns.pdbx_number_measured_all 257744 _reflns.number_obs 47523 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_netI_over_sigmaI 14.600 _reflns.pdbx_redundancy 5.400 _reflns.percent_possible_obs 97.400 _reflns.pdbx_Rrim_I_all 0.064 _reflns.pdbx_Rpim_I_all 0.026 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5B8D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.050 1.070 ? 4539 ? 0 0.893 1.000 ? ? 2.400 ? ? ? 1876 ? ? ? ? 79.100 1.125 0.672 0.478 1 2 5.760 33.420 ? 2071 ? 0 0.036 49.700 ? ? 5.700 ? ? ? 361 ? ? ? ? 99.600 0.040 0.016 0.997 # _refine.entry_id 5B8D _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.0500 _refine.ls_d_res_low 34.8000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.2000 _refine.ls_number_reflns_obs 45286 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;Users of this crystal structure: verify our intepretion of the electron density. Amplitudes and unmerged intensities are included with this deposition. Diffraction images will be deposited in a public repository. Geometry restraints for the fragment candidate were prepared with GRADE. The methyl group of the fragment candidate was not resolved by electron density and was omitted from the model. Ambiguous difference density suggests some form of covalent modification of Cys1147. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1291 _refine.ls_R_factor_R_work 0.1283 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1464 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.6000 _refine.ls_number_reflns_R_free 2178 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 13.1890 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.2100 _refine.aniso_B[2][2] 0.6700 _refine.aniso_B[3][3] -0.4600 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9800 _refine.correlation_coeff_Fo_to_Fc_free 0.9770 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0230 _refine.pdbx_overall_ESU_R_Free 0.0230 _refine.overall_SU_ML 0.0160 _refine.overall_SU_B 0.7330 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'pdbid 3C5K' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 69.280 _refine.B_iso_min 6.880 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.0500 _refine_hist.d_res_low 34.8000 _refine_hist.pdbx_number_atoms_ligand 56 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 914 _refine_hist.pdbx_number_residues_total 100 _refine_hist.pdbx_B_iso_mean_ligand 21.92 _refine_hist.pdbx_B_iso_mean_solvent 24.11 _refine_hist.pdbx_number_atoms_protein 779 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 918 0.016 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 822 0.003 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1270 1.504 1.901 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 1897 1.098 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 119 6.624 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 44 34.210 25.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 131 11.047 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 1 6.140 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 135 0.110 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1124 0.010 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 235 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 438 0.862 1.100 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 439 0.886 1.099 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 555 1.177 1.663 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 1740 1.543 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 29 20.677 5.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 1792 5.867 5.000 ? ? # _refine_ls_shell.d_res_high 1.0520 _refine_ls_shell.d_res_low 1.0800 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 82.3500 _refine_ls_shell.number_reflns_R_work 2787 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2950 _refine_ls_shell.R_factor_R_free 0.3050 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 152 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2939 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 5B8D _struct.title ;Crystal structure of a low occupancy fragment candidate (N-(4-Methyl-1,3-thiazol-2-yl)propanamide) bound adjacent to the ubiquitin binding pocket of the HDAC6 zinc-finger domain ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5B8D _struct_keywords.text 'HISTONE DEACETYLASE, HDAC, HDAC6, FRAGMENT SCREENING, STRUCTURAL GENOMICS CONSORTIUM, SGC, DIAMOND I04-1 XCHEM, PANDDA, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 5 ? S N N 5 ? T N N 5 ? U N N 5 ? V N N 5 ? W N N 5 ? X N N 5 ? Y N N 5 ? Z N N 5 ? AA N N 5 ? BA N N 5 ? CA N N 5 ? DA N N 5 ? EA N N 5 ? FA N N 5 ? GA N N 5 ? HA N N 5 ? IA N N 5 ? JA N N 5 ? KA N N 5 ? LA N N 5 ? MA N N 5 ? NA N N 5 ? OA N N 5 ? PA N N 5 ? QA N N 5 ? RA N N 6 ? SA N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 9 ? VAL A 13 ? HIS A 1115 VAL A 1119 5 ? 5 HELX_P HELX_P2 AA2 GLY A 53 ? GLY A 63 ? GLY A 1159 GLY A 1169 1 ? 11 HELX_P HELX_P3 AA3 HIS A 86 ? ALA A 88 ? HIS A 1192 ALA A 1194 5 ? 3 HELX_P HELX_P4 AA4 LEU A 89 ? PHE A 101 ? LEU A 1195 PHE A 1207 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 7 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 1113 A ZN 1303 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc2 metalc ? ? A HIS 9 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 1115 A ZN 1303 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc3 metalc ? ? A CYS 27 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 1133 A ZN 1302 1_555 ? ? ? ? ? ? ? 2.386 ? ? metalc4 metalc ? ? A CYS 30 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 1136 A ZN 1302 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc5 metalc ? ? A CYS 39 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 1145 A ZN 1301 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc6 metalc ? ? A CYS 47 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 1153 A ZN 1302 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc7 metalc ? ? A TYR 50 O ? ? ? 1_555 RA NA . NA ? ? A TYR 1156 A NA 1343 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc8 metalc ? ? A ILE 51 O ? ? ? 1_555 RA NA . NA ? ? A ILE 1157 A NA 1343 1_555 ? ? ? ? ? ? ? 2.420 ? ? metalc9 metalc ? ? A HIS 54 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 1160 A ZN 1302 1_555 ? ? ? ? ? ? ? 2.117 ? ? metalc10 metalc ? ? A HIS 58 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 1164 A ZN 1301 1_555 ? ? ? ? ? ? ? 2.089 ? ? metalc11 metalc ? ? A HIS 64 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 1170 A ZN 1301 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc12 metalc ? ? A CYS 77 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 1183 A ZN 1303 1_555 ? ? ? ? ? ? ? 2.353 ? ? metalc13 metalc ? ? A CYS 80 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 1186 A ZN 1303 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc14 metalc ? ? RA NA . NA ? ? ? 1_555 SA HOH . O ? ? A NA 1343 A HOH 1449 1_555 ? ? ? ? ? ? ? 2.489 ? ? metalc15 metalc ? ? RA NA . NA ? ? ? 1_555 SA HOH . O ? ? A NA 1343 A HOH 1469 1_555 ? ? ? ? ? ? ? 2.450 ? ? metalc16 metalc ? ? RA NA . NA ? ? ? 1_555 SA HOH . O ? ? A NA 1343 A HOH 1470 3_555 ? ? ? ? ? ? ? 2.455 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 45 ? CYS A 47 ? VAL A 1151 CYS A 1153 AA1 2 ASN A 36 ? CYS A 39 ? ASN A 1142 CYS A 1145 AA1 3 LEU A 66 ? SER A 69 ? LEU A 1172 SER A 1175 AA1 4 ALA A 75 ? CYS A 77 ? ALA A 1181 CYS A 1183 AA1 5 ALA A 82 ? TYR A 83 ? ALA A 1188 TYR A 1189 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O TYR A 46 ? O TYR A 1152 N TRP A 37 ? N TRP A 1143 AA1 2 3 N VAL A 38 ? N VAL A 1144 O LEU A 68 ? O LEU A 1174 AA1 3 4 N VAL A 67 ? N VAL A 1173 O TRP A 76 ? O TRP A 1182 AA1 4 5 N CYS A 77 ? N CYS A 1183 O ALA A 82 ? O ALA A 1188 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 1301 ? 4 'binding site for residue ZN A 1301' AC2 Software A ZN 1302 ? 4 'binding site for residue ZN A 1302' AC3 Software A ZN 1303 ? 4 'binding site for residue ZN A 1303' AC4 Software A FMT 1304 ? 7 'binding site for residue FMT A 1304' AC5 Software A FMT 1305 ? 5 'binding site for residue FMT A 1305' AC6 Software A 6T4 1306 ? 8 'binding site for residue 6T4 A 1306' AC7 Software A NA 1343 ? 5 'binding site for residue NA A 1343' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 39 ? CYS A 1145 . ? 1_555 ? 2 AC1 4 CYS A 42 ? CYS A 1148 . ? 1_555 ? 3 AC1 4 HIS A 58 ? HIS A 1164 . ? 1_555 ? 4 AC1 4 HIS A 64 ? HIS A 1170 . ? 1_555 ? 5 AC2 4 CYS A 27 ? CYS A 1133 . ? 1_555 ? 6 AC2 4 CYS A 30 ? CYS A 1136 . ? 1_555 ? 7 AC2 4 CYS A 47 ? CYS A 1153 . ? 1_555 ? 8 AC2 4 HIS A 54 ? HIS A 1160 . ? 1_555 ? 9 AC3 4 CYS A 7 ? CYS A 1113 . ? 1_555 ? 10 AC3 4 HIS A 9 ? HIS A 1115 . ? 1_555 ? 11 AC3 4 CYS A 77 ? CYS A 1183 . ? 1_555 ? 12 AC3 4 CYS A 80 ? CYS A 1186 . ? 1_555 ? 13 AC4 7 TRP A 37 ? TRP A 1143 . ? 1_555 ? 14 AC4 7 GLY A 48 ? GLY A 1154 . ? 1_555 ? 15 AC4 7 ARG A 49 ? ARG A 1155 . ? 1_555 ? 16 AC4 7 LEU A 56 ? LEU A 1162 . ? 1_555 ? 17 AC4 7 TYR A 78 ? TYR A 1184 . ? 1_555 ? 18 AC4 7 HOH SA . ? HOH A 1409 . ? 1_555 ? 19 AC4 7 HOH SA . ? HOH A 1417 . ? 1_555 ? 20 AC5 5 TRP A 37 ? TRP A 1143 . ? 1_555 ? 21 AC5 5 TRP A 76 ? TRP A 1182 . ? 1_555 ? 22 AC5 5 TYR A 83 ? TYR A 1189 . ? 1_555 ? 23 AC5 5 6T4 G . ? 6T4 A 1306 . ? 1_555 ? 24 AC5 5 HOH SA . ? HOH A 1445 . ? 1_555 ? 25 AC6 8 GLU A 35 ? GLU A 1141 . ? 1_555 ? 26 AC6 8 ASN A 36 ? ASN A 1142 . ? 1_555 ? 27 AC6 8 TRP A 37 ? TRP A 1143 . ? 1_555 ? 28 AC6 8 SER A 69 ? SER A 1175 . ? 1_555 ? 29 AC6 8 ASP A 72 ? ASP A 1178 . ? 1_555 ? 30 AC6 8 TYR A 83 ? TYR A 1189 . ? 1_555 ? 31 AC6 8 ASN A 94 ? ASN A 1200 . ? 3_555 ? 32 AC6 8 FMT F . ? FMT A 1305 . ? 1_555 ? 33 AC7 5 TYR A 50 ? TYR A 1156 . ? 1_555 ? 34 AC7 5 ILE A 51 ? ILE A 1157 . ? 1_555 ? 35 AC7 5 HOH SA . ? HOH A 1449 . ? 1_555 ? 36 AC7 5 HOH SA . ? HOH A 1469 . ? 1_555 ? 37 AC7 5 HOH SA . ? HOH A 1470 . ? 3_555 ? # _atom_sites.entry_id 5B8D _atom_sites.fract_transf_matrix[1][1] 0.024135 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022646 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017684 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N NA O S X ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1107 ? ? ? A . n A 1 2 SER 2 1108 ? ? ? A . n A 1 3 PRO 3 1109 1109 PRO PRO A . n A 1 4 LEU 4 1110 1110 LEU LEU A . n A 1 5 PRO 5 1111 1111 PRO PRO A . n A 1 6 TRP 6 1112 1112 TRP TRP A . n A 1 7 CYS 7 1113 1113 CYS CYS A . n A 1 8 PRO 8 1114 1114 PRO PRO A . n A 1 9 HIS 9 1115 1115 HIS HIS A . n A 1 10 LEU 10 1116 1116 LEU LEU A . n A 1 11 VAL 11 1117 1117 VAL VAL A . n A 1 12 ALA 12 1118 1118 ALA ALA A . n A 1 13 VAL 13 1119 1119 VAL VAL A . n A 1 14 CYS 14 1120 1120 CYS CYS A . n A 1 15 PRO 15 1121 1121 PRO PRO A . n A 1 16 ILE 16 1122 1122 ILE ILE A . n A 1 17 PRO 17 1123 1123 PRO PRO A . n A 1 18 ALA 18 1124 1124 ALA ALA A . n A 1 19 ALA 19 1125 1125 ALA ALA A . n A 1 20 GLY 20 1126 1126 GLY GLY A . n A 1 21 LEU 21 1127 1127 LEU LEU A . n A 1 22 ASP 22 1128 1128 ASP ASP A . n A 1 23 VAL 23 1129 1129 VAL VAL A . n A 1 24 THR 24 1130 1130 THR THR A . n A 1 25 GLN 25 1131 1131 GLN GLN A . n A 1 26 PRO 26 1132 1132 PRO PRO A . n A 1 27 CYS 27 1133 1133 CYS CYS A . n A 1 28 GLY 28 1134 1134 GLY GLY A . n A 1 29 ASP 29 1135 1135 ASP ASP A . n A 1 30 CYS 30 1136 1136 CYS CYS A . n A 1 31 GLY 31 1137 1137 GLY GLY A . n A 1 32 THR 32 1138 1138 THR THR A . n A 1 33 ILE 33 1139 1139 ILE ILE A . n A 1 34 GLN 34 1140 1140 GLN GLN A . n A 1 35 GLU 35 1141 1141 GLU GLU A . n A 1 36 ASN 36 1142 1142 ASN ASN A . n A 1 37 TRP 37 1143 1143 TRP TRP A . n A 1 38 VAL 38 1144 1144 VAL VAL A . n A 1 39 CYS 39 1145 1145 CYS CYS A . n A 1 40 LEU 40 1146 1146 LEU LEU A . n A 1 41 SER 41 1147 1147 SER SER A . n A 1 42 CYS 42 1148 1148 CYS CYS A . n A 1 43 TYR 43 1149 1149 TYR TYR A . n A 1 44 GLN 44 1150 1150 GLN GLN A . n A 1 45 VAL 45 1151 1151 VAL VAL A . n A 1 46 TYR 46 1152 1152 TYR TYR A . n A 1 47 CYS 47 1153 1153 CYS CYS A . n A 1 48 GLY 48 1154 1154 GLY GLY A . n A 1 49 ARG 49 1155 1155 ARG ARG A . n A 1 50 TYR 50 1156 1156 TYR TYR A . n A 1 51 ILE 51 1157 1157 ILE ILE A . n A 1 52 ASN 52 1158 1158 ASN ASN A . n A 1 53 GLY 53 1159 1159 GLY GLY A . n A 1 54 HIS 54 1160 1160 HIS HIS A . n A 1 55 MET 55 1161 1161 MET MET A . n A 1 56 LEU 56 1162 1162 LEU LEU A . n A 1 57 GLN 57 1163 1163 GLN GLN A . n A 1 58 HIS 58 1164 1164 HIS HIS A . n A 1 59 HIS 59 1165 1165 HIS HIS A . n A 1 60 GLY 60 1166 1166 GLY GLY A . n A 1 61 ASN 61 1167 1167 ASN ASN A . n A 1 62 SER 62 1168 1168 SER SER A . n A 1 63 GLY 63 1169 1169 GLY GLY A . n A 1 64 HIS 64 1170 1170 HIS HIS A . n A 1 65 PRO 65 1171 1171 PRO PRO A . n A 1 66 LEU 66 1172 1172 LEU LEU A . n A 1 67 VAL 67 1173 1173 VAL VAL A . n A 1 68 LEU 68 1174 1174 LEU LEU A . n A 1 69 SER 69 1175 1175 SER SER A . n A 1 70 TYR 70 1176 1176 TYR TYR A . n A 1 71 ILE 71 1177 1177 ILE ILE A . n A 1 72 ASP 72 1178 1178 ASP ASP A . n A 1 73 LEU 73 1179 1179 LEU LEU A . n A 1 74 SER 74 1180 1180 SER SER A . n A 1 75 ALA 75 1181 1181 ALA ALA A . n A 1 76 TRP 76 1182 1182 TRP TRP A . n A 1 77 CYS 77 1183 1183 CYS CYS A . n A 1 78 TYR 78 1184 1184 TYR TYR A . n A 1 79 TYR 79 1185 1185 TYR TYR A . n A 1 80 CYS 80 1186 1186 CYS CYS A . n A 1 81 GLN 81 1187 1187 GLN GLN A . n A 1 82 ALA 82 1188 1188 ALA ALA A . n A 1 83 TYR 83 1189 1189 TYR TYR A . n A 1 84 VAL 84 1190 1190 VAL VAL A . n A 1 85 HIS 85 1191 1191 HIS HIS A . n A 1 86 HIS 86 1192 1192 HIS HIS A . n A 1 87 GLN 87 1193 1193 GLN GLN A . n A 1 88 ALA 88 1194 1194 ALA ALA A . n A 1 89 LEU 89 1195 1195 LEU LEU A . n A 1 90 LEU 90 1196 1196 LEU LEU A . n A 1 91 ASP 91 1197 1197 ASP ASP A . n A 1 92 VAL 92 1198 1198 VAL VAL A . n A 1 93 LYS 93 1199 1199 LYS LYS A . n A 1 94 ASN 94 1200 1200 ASN ASN A . n A 1 95 ILE 95 1201 1201 ILE ILE A . n A 1 96 ALA 96 1202 1202 ALA ALA A . n A 1 97 HIS 97 1203 1203 HIS HIS A . n A 1 98 GLN 98 1204 1204 GLN GLN A . n A 1 99 ASN 99 1205 1205 ASN ASN A . n A 1 100 LYS 100 1206 1206 LYS LYS A . n A 1 101 PHE 101 1207 1207 PHE PHE A . n A 1 102 GLY 102 1208 1208 GLY GLY A . n A 1 103 GLU 103 1209 ? ? ? A . n A 1 104 ASP 104 1210 ? ? ? A . n A 1 105 MET 105 1211 ? ? ? A . n A 1 106 PRO 106 1212 ? ? ? A . n A 1 107 HIS 107 1213 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 1301 201 ZN ZN A . C 2 ZN 1 1302 202 ZN ZN A . D 2 ZN 1 1303 203 ZN ZN A . E 3 FMT 1 1304 1 FMT FMT A . F 3 FMT 1 1305 2 FMT FMT A . G 4 6T4 1 1306 1 6T4 304 A . H 5 UNX 1 1307 1 UNX UNX A . I 5 UNX 1 1308 2 UNX UNX A . J 5 UNX 1 1309 3 UNX UNX A . K 5 UNX 1 1310 4 UNX UNX A . L 5 UNX 1 1311 5 UNX UNX A . M 5 UNX 1 1312 6 UNX UNX A . N 5 UNX 1 1313 7 UNX UNX A . O 5 UNX 1 1314 8 UNX UNX A . P 5 UNX 1 1315 9 UNX UNX A . Q 5 UNX 1 1316 10 UNX UNX A . R 5 UNX 1 1317 11 UNX UNX A . S 5 UNX 1 1318 12 UNX UNX A . T 5 UNX 1 1319 13 UNX UNX A . U 5 UNX 1 1320 14 UNX UNX A . V 5 UNX 1 1321 15 UNX UNX A . W 5 UNX 1 1322 16 UNX UNX A . X 5 UNX 1 1323 17 UNX UNX A . Y 5 UNX 1 1324 18 UNX UNX A . Z 5 UNX 1 1325 19 UNX UNX A . AA 5 UNX 1 1326 20 UNX UNX A . BA 5 UNX 1 1327 21 UNX UNX A . CA 5 UNX 1 1328 22 UNX UNX A . DA 5 UNX 1 1329 23 UNX UNX A . EA 5 UNX 1 1330 24 UNX UNX A . FA 5 UNX 1 1331 25 UNX UNX A . GA 5 UNX 1 1332 26 UNX UNX A . HA 5 UNX 1 1333 27 UNX UNX A . IA 5 UNX 1 1334 28 UNX UNX A . JA 5 UNX 1 1335 29 UNX UNX A . KA 5 UNX 1 1336 30 UNX UNX A . LA 5 UNX 1 1337 31 UNX UNX A . MA 5 UNX 1 1338 32 UNX UNX A . NA 5 UNX 1 1339 33 UNX UNX A . OA 5 UNX 1 1340 34 UNX UNX A . PA 5 UNX 1 1341 35 UNX UNX A . QA 5 UNX 1 1342 36 UNX UNX A . RA 6 NA 1 1343 1 NA NA A . SA 7 HOH 1 1401 14 HOH HOH A . SA 7 HOH 2 1402 45 HOH HOH A . SA 7 HOH 3 1403 30 HOH HOH A . SA 7 HOH 4 1404 32 HOH HOH A . SA 7 HOH 5 1405 43 HOH HOH A . SA 7 HOH 6 1406 7 HOH HOH A . SA 7 HOH 7 1407 27 HOH HOH A . SA 7 HOH 8 1408 48 HOH HOH A . SA 7 HOH 9 1409 66 HOH HOH A . SA 7 HOH 10 1410 71 HOH HOH A . SA 7 HOH 11 1411 54 HOH HOH A . SA 7 HOH 12 1412 9 HOH HOH A . SA 7 HOH 13 1413 74 HOH HOH A . SA 7 HOH 14 1414 20 HOH HOH A . SA 7 HOH 15 1415 39 HOH HOH A . SA 7 HOH 16 1416 4 HOH HOH A . SA 7 HOH 17 1417 1 HOH HOH A . SA 7 HOH 18 1418 35 HOH HOH A . SA 7 HOH 19 1419 62 HOH HOH A . SA 7 HOH 20 1420 31 HOH HOH A . SA 7 HOH 21 1421 49 HOH HOH A . SA 7 HOH 22 1422 13 HOH HOH A . SA 7 HOH 23 1423 26 HOH HOH A . SA 7 HOH 24 1424 12 HOH HOH A . SA 7 HOH 25 1425 22 HOH HOH A . SA 7 HOH 26 1426 47 HOH HOH A . SA 7 HOH 27 1427 8 HOH HOH A . SA 7 HOH 28 1428 50 HOH HOH A . SA 7 HOH 29 1429 18 HOH HOH A . SA 7 HOH 30 1430 6 HOH HOH A . SA 7 HOH 31 1431 19 HOH HOH A . SA 7 HOH 32 1432 25 HOH HOH A . SA 7 HOH 33 1433 16 HOH HOH A . SA 7 HOH 34 1434 34 HOH HOH A . SA 7 HOH 35 1435 69 HOH HOH A . SA 7 HOH 36 1436 3 HOH HOH A . SA 7 HOH 37 1437 75 HOH HOH A . SA 7 HOH 38 1438 73 HOH HOH A . SA 7 HOH 39 1439 40 HOH HOH A . SA 7 HOH 40 1440 28 HOH HOH A . SA 7 HOH 41 1441 33 HOH HOH A . SA 7 HOH 42 1442 56 HOH HOH A . SA 7 HOH 43 1443 38 HOH HOH A . SA 7 HOH 44 1444 17 HOH HOH A . SA 7 HOH 45 1445 63 HOH HOH A . SA 7 HOH 46 1446 21 HOH HOH A . SA 7 HOH 47 1447 36 HOH HOH A . SA 7 HOH 48 1448 68 HOH HOH A . SA 7 HOH 49 1449 41 HOH HOH A . SA 7 HOH 50 1450 10 HOH HOH A . SA 7 HOH 51 1451 65 HOH HOH A . SA 7 HOH 52 1452 59 HOH HOH A . SA 7 HOH 53 1453 5 HOH HOH A . SA 7 HOH 54 1454 67 HOH HOH A . SA 7 HOH 55 1455 44 HOH HOH A . SA 7 HOH 56 1456 2 HOH HOH A . SA 7 HOH 57 1457 79 HOH HOH A . SA 7 HOH 58 1458 60 HOH HOH A . SA 7 HOH 59 1459 24 HOH HOH A . SA 7 HOH 60 1460 46 HOH HOH A . SA 7 HOH 61 1461 29 HOH HOH A . SA 7 HOH 62 1462 23 HOH HOH A . SA 7 HOH 63 1463 53 HOH HOH A . SA 7 HOH 64 1464 15 HOH HOH A . SA 7 HOH 65 1465 57 HOH HOH A . SA 7 HOH 66 1466 11 HOH HOH A . SA 7 HOH 67 1467 72 HOH HOH A . SA 7 HOH 68 1468 64 HOH HOH A . SA 7 HOH 69 1469 70 HOH HOH A . SA 7 HOH 70 1470 61 HOH HOH A . SA 7 HOH 71 1471 76 HOH HOH A . SA 7 HOH 72 1472 51 HOH HOH A . SA 7 HOH 73 1473 52 HOH HOH A . SA 7 HOH 74 1474 37 HOH HOH A . SA 7 HOH 75 1475 55 HOH HOH A . SA 7 HOH 76 1476 58 HOH HOH A . SA 7 HOH 77 1477 78 HOH HOH A . SA 7 HOH 78 1478 42 HOH HOH A . SA 7 HOH 79 1479 77 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 520 ? 1 MORE -8 ? 1 'SSA (A^2)' 5900 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 7 ? A CYS 1113 ? 1_555 ZN ? D ZN . ? A ZN 1303 ? 1_555 ND1 ? A HIS 9 ? A HIS 1115 ? 1_555 109.5 ? 2 SG ? A CYS 7 ? A CYS 1113 ? 1_555 ZN ? D ZN . ? A ZN 1303 ? 1_555 SG ? A CYS 77 ? A CYS 1183 ? 1_555 116.5 ? 3 ND1 ? A HIS 9 ? A HIS 1115 ? 1_555 ZN ? D ZN . ? A ZN 1303 ? 1_555 SG ? A CYS 77 ? A CYS 1183 ? 1_555 99.6 ? 4 SG ? A CYS 7 ? A CYS 1113 ? 1_555 ZN ? D ZN . ? A ZN 1303 ? 1_555 SG ? A CYS 80 ? A CYS 1186 ? 1_555 111.7 ? 5 ND1 ? A HIS 9 ? A HIS 1115 ? 1_555 ZN ? D ZN . ? A ZN 1303 ? 1_555 SG ? A CYS 80 ? A CYS 1186 ? 1_555 105.8 ? 6 SG ? A CYS 77 ? A CYS 1183 ? 1_555 ZN ? D ZN . ? A ZN 1303 ? 1_555 SG ? A CYS 80 ? A CYS 1186 ? 1_555 112.6 ? 7 SG ? A CYS 27 ? A CYS 1133 ? 1_555 ZN ? C ZN . ? A ZN 1302 ? 1_555 SG ? A CYS 30 ? A CYS 1136 ? 1_555 109.3 ? 8 SG ? A CYS 27 ? A CYS 1133 ? 1_555 ZN ? C ZN . ? A ZN 1302 ? 1_555 SG ? A CYS 47 ? A CYS 1153 ? 1_555 113.4 ? 9 SG ? A CYS 30 ? A CYS 1136 ? 1_555 ZN ? C ZN . ? A ZN 1302 ? 1_555 SG ? A CYS 47 ? A CYS 1153 ? 1_555 114.6 ? 10 SG ? A CYS 27 ? A CYS 1133 ? 1_555 ZN ? C ZN . ? A ZN 1302 ? 1_555 ND1 ? A HIS 54 ? A HIS 1160 ? 1_555 106.8 ? 11 SG ? A CYS 30 ? A CYS 1136 ? 1_555 ZN ? C ZN . ? A ZN 1302 ? 1_555 ND1 ? A HIS 54 ? A HIS 1160 ? 1_555 111.2 ? 12 SG ? A CYS 47 ? A CYS 1153 ? 1_555 ZN ? C ZN . ? A ZN 1302 ? 1_555 ND1 ? A HIS 54 ? A HIS 1160 ? 1_555 101.1 ? 13 SG ? A CYS 39 ? A CYS 1145 ? 1_555 ZN ? B ZN . ? A ZN 1301 ? 1_555 NE2 ? A HIS 58 ? A HIS 1164 ? 1_555 116.2 ? 14 SG ? A CYS 39 ? A CYS 1145 ? 1_555 ZN ? B ZN . ? A ZN 1301 ? 1_555 ND1 ? A HIS 64 ? A HIS 1170 ? 1_555 110.0 ? 15 NE2 ? A HIS 58 ? A HIS 1164 ? 1_555 ZN ? B ZN . ? A ZN 1301 ? 1_555 ND1 ? A HIS 64 ? A HIS 1170 ? 1_555 112.0 ? 16 O ? A TYR 50 ? A TYR 1156 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? A ILE 51 ? A ILE 1157 ? 1_555 85.3 ? 17 O ? A TYR 50 ? A TYR 1156 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? SA HOH . ? A HOH 1449 ? 1_555 88.9 ? 18 O ? A ILE 51 ? A ILE 1157 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? SA HOH . ? A HOH 1449 ? 1_555 91.6 ? 19 O ? A TYR 50 ? A TYR 1156 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? SA HOH . ? A HOH 1469 ? 1_555 176.6 ? 20 O ? A ILE 51 ? A ILE 1157 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? SA HOH . ? A HOH 1469 ? 1_555 92.6 ? 21 O ? SA HOH . ? A HOH 1449 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? SA HOH . ? A HOH 1469 ? 1_555 88.5 ? 22 O ? A TYR 50 ? A TYR 1156 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? SA HOH . ? A HOH 1470 ? 3_555 84.0 ? 23 O ? A ILE 51 ? A ILE 1157 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? SA HOH . ? A HOH 1470 ? 3_555 169.2 ? 24 O ? SA HOH . ? A HOH 1449 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? SA HOH . ? A HOH 1470 ? 3_555 86.5 ? 25 O ? SA HOH . ? A HOH 1469 ? 1_555 NA ? RA NA . ? A NA 1343 ? 1_555 O ? SA HOH . ? A HOH 1470 ? 3_555 98.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-07-27 2 'Structure model' 1 1 2018-03-21 3 'Structure model' 1 2 2019-02-27 4 'Structure model' 1 3 2022-10-12 5 'Structure model' 1 4 2023-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' Other 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' diffrn_source 4 2 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' citation_author 6 4 'Structure model' database_2 7 4 'Structure model' diffrn_radiation_wavelength 8 4 'Structure model' pdbx_database_status 9 5 'Structure model' chem_comp_atom 10 5 'Structure model' chem_comp_bond 11 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 14 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 15 3 'Structure model' '_citation_author.identifier_ORCID' 16 4 'Structure model' '_database_2.pdbx_DOI' 17 4 'Structure model' '_database_2.pdbx_database_accession' 18 4 'Structure model' '_pdbx_database_status.deposit_site' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0151 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.26 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 SG A CYS 1148 ? ? UNK A UNX 1313 ? ? 1.51 2 1 O A GLN 1140 ? B UNK A UNX 1325 ? ? 1.55 3 1 SG A CYS 1148 ? ? UNK A UNX 1314 ? ? 1.56 4 1 UNK A UNX 1309 ? ? UNK A UNX 1326 ? ? 1.70 5 1 OD1 A ASN 1205 ? B O A HOH 1401 ? ? 1.76 6 1 UNK A UNX 1326 ? ? UNK A UNX 1341 ? ? 1.84 7 1 OD1 A ASN 1205 ? B O A HOH 1402 ? ? 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 1135 ? A -95.94 -62.34 2 1 ILE A 1157 ? ? -94.08 -104.29 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLY 1208 ? CA ? A GLY 102 CA 2 1 Y 1 A GLY 1208 ? C ? A GLY 102 C 3 1 Y 1 A GLY 1208 ? O ? A GLY 102 O # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1107 ? A GLY 1 2 1 Y 1 A SER 1108 ? A SER 2 3 1 Y 1 A GLU 1209 ? A GLU 103 4 1 Y 1 A ASP 1210 ? A ASP 104 5 1 Y 1 A MET 1211 ? A MET 105 6 1 Y 1 A PRO 1212 ? A PRO 106 7 1 Y 1 A HIS 1213 ? A HIS 107 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6T4 C1 C N N 1 6T4 C2 C N N 2 6T4 C3 C Y N 3 6T4 C4 C Y N 4 6T4 C5 C Y N 5 6T4 C6 C N N 6 6T4 O O N N 7 6T4 N N N N 8 6T4 S S Y N 9 6T4 N1 N Y N 10 6T4 H4 H N N 11 6T4 H3 H N N 12 6T4 H1 H N N 13 6T4 H6 H N N 14 6T4 H7 H N N 15 6T4 H9 H N N 16 6T4 H8 H N N 17 6T4 H5 H N N 18 ALA N N N N 19 ALA CA C N S 20 ALA C C N N 21 ALA O O N N 22 ALA CB C N N 23 ALA OXT O N N 24 ALA H H N N 25 ALA H2 H N N 26 ALA HA H N N 27 ALA HB1 H N N 28 ALA HB2 H N N 29 ALA HB3 H N N 30 ALA HXT H N N 31 ARG N N N N 32 ARG CA C N S 33 ARG C C N N 34 ARG O O N N 35 ARG CB C N N 36 ARG CG C N N 37 ARG CD C N N 38 ARG NE N N N 39 ARG CZ C N N 40 ARG NH1 N N N 41 ARG NH2 N N N 42 ARG OXT O N N 43 ARG H H N N 44 ARG H2 H N N 45 ARG HA H N N 46 ARG HB2 H N N 47 ARG HB3 H N N 48 ARG HG2 H N N 49 ARG HG3 H N N 50 ARG HD2 H N N 51 ARG HD3 H N N 52 ARG HE H N N 53 ARG HH11 H N N 54 ARG HH12 H N N 55 ARG HH21 H N N 56 ARG HH22 H N N 57 ARG HXT H N N 58 ASN N N N N 59 ASN CA C N S 60 ASN C C N N 61 ASN O O N N 62 ASN CB C N N 63 ASN CG C N N 64 ASN OD1 O N N 65 ASN ND2 N N N 66 ASN OXT O N N 67 ASN H H N N 68 ASN H2 H N N 69 ASN HA H N N 70 ASN HB2 H N N 71 ASN HB3 H N N 72 ASN HD21 H N N 73 ASN HD22 H N N 74 ASN HXT H N N 75 ASP N N N N 76 ASP CA C N S 77 ASP C C N N 78 ASP O O N N 79 ASP CB C N N 80 ASP CG C N N 81 ASP OD1 O N N 82 ASP OD2 O N N 83 ASP OXT O N N 84 ASP H H N N 85 ASP H2 H N N 86 ASP HA H N N 87 ASP HB2 H N N 88 ASP HB3 H N N 89 ASP HD2 H N N 90 ASP HXT H N N 91 CYS N N N N 92 CYS CA C N R 93 CYS C C N N 94 CYS O O N N 95 CYS CB C N N 96 CYS SG S N N 97 CYS OXT O N N 98 CYS H H N N 99 CYS H2 H N N 100 CYS HA H N N 101 CYS HB2 H N N 102 CYS HB3 H N N 103 CYS HG H N N 104 CYS HXT H N N 105 FMT C C N N 106 FMT O1 O N N 107 FMT O2 O N N 108 FMT H H N N 109 FMT HO2 H N N 110 GLN N N N N 111 GLN CA C N S 112 GLN C C N N 113 GLN O O N N 114 GLN CB C N N 115 GLN CG C N N 116 GLN CD C N N 117 GLN OE1 O N N 118 GLN NE2 N N N 119 GLN OXT O N N 120 GLN H H N N 121 GLN H2 H N N 122 GLN HA H N N 123 GLN HB2 H N N 124 GLN HB3 H N N 125 GLN HG2 H N N 126 GLN HG3 H N N 127 GLN HE21 H N N 128 GLN HE22 H N N 129 GLN HXT H N N 130 GLU N N N N 131 GLU CA C N S 132 GLU C C N N 133 GLU O O N N 134 GLU CB C N N 135 GLU CG C N N 136 GLU CD C N N 137 GLU OE1 O N N 138 GLU OE2 O N N 139 GLU OXT O N N 140 GLU H H N N 141 GLU H2 H N N 142 GLU HA H N N 143 GLU HB2 H N N 144 GLU HB3 H N N 145 GLU HG2 H N N 146 GLU HG3 H N N 147 GLU HE2 H N N 148 GLU HXT H N N 149 GLY N N N N 150 GLY CA C N N 151 GLY C C N N 152 GLY O O N N 153 GLY OXT O N N 154 GLY H H N N 155 GLY H2 H N N 156 GLY HA2 H N N 157 GLY HA3 H N N 158 GLY HXT H N N 159 HIS N N N N 160 HIS CA C N S 161 HIS C C N N 162 HIS O O N N 163 HIS CB C N N 164 HIS CG C Y N 165 HIS ND1 N Y N 166 HIS CD2 C Y N 167 HIS CE1 C Y N 168 HIS NE2 N Y N 169 HIS OXT O N N 170 HIS H H N N 171 HIS H2 H N N 172 HIS HA H N N 173 HIS HB2 H N N 174 HIS HB3 H N N 175 HIS HD1 H N N 176 HIS HD2 H N N 177 HIS HE1 H N N 178 HIS HE2 H N N 179 HIS HXT H N N 180 HOH O O N N 181 HOH H1 H N N 182 HOH H2 H N N 183 ILE N N N N 184 ILE CA C N S 185 ILE C C N N 186 ILE O O N N 187 ILE CB C N S 188 ILE CG1 C N N 189 ILE CG2 C N N 190 ILE CD1 C N N 191 ILE OXT O N N 192 ILE H H N N 193 ILE H2 H N N 194 ILE HA H N N 195 ILE HB H N N 196 ILE HG12 H N N 197 ILE HG13 H N N 198 ILE HG21 H N N 199 ILE HG22 H N N 200 ILE HG23 H N N 201 ILE HD11 H N N 202 ILE HD12 H N N 203 ILE HD13 H N N 204 ILE HXT H N N 205 LEU N N N N 206 LEU CA C N S 207 LEU C C N N 208 LEU O O N N 209 LEU CB C N N 210 LEU CG C N N 211 LEU CD1 C N N 212 LEU CD2 C N N 213 LEU OXT O N N 214 LEU H H N N 215 LEU H2 H N N 216 LEU HA H N N 217 LEU HB2 H N N 218 LEU HB3 H N N 219 LEU HG H N N 220 LEU HD11 H N N 221 LEU HD12 H N N 222 LEU HD13 H N N 223 LEU HD21 H N N 224 LEU HD22 H N N 225 LEU HD23 H N N 226 LEU HXT H N N 227 LYS N N N N 228 LYS CA C N S 229 LYS C C N N 230 LYS O O N N 231 LYS CB C N N 232 LYS CG C N N 233 LYS CD C N N 234 LYS CE C N N 235 LYS NZ N N N 236 LYS OXT O N N 237 LYS H H N N 238 LYS H2 H N N 239 LYS HA H N N 240 LYS HB2 H N N 241 LYS HB3 H N N 242 LYS HG2 H N N 243 LYS HG3 H N N 244 LYS HD2 H N N 245 LYS HD3 H N N 246 LYS HE2 H N N 247 LYS HE3 H N N 248 LYS HZ1 H N N 249 LYS HZ2 H N N 250 LYS HZ3 H N N 251 LYS HXT H N N 252 MET N N N N 253 MET CA C N S 254 MET C C N N 255 MET O O N N 256 MET CB C N N 257 MET CG C N N 258 MET SD S N N 259 MET CE C N N 260 MET OXT O N N 261 MET H H N N 262 MET H2 H N N 263 MET HA H N N 264 MET HB2 H N N 265 MET HB3 H N N 266 MET HG2 H N N 267 MET HG3 H N N 268 MET HE1 H N N 269 MET HE2 H N N 270 MET HE3 H N N 271 MET HXT H N N 272 NA NA NA N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 SER N N N N 314 SER CA C N S 315 SER C C N N 316 SER O O N N 317 SER CB C N N 318 SER OG O N N 319 SER OXT O N N 320 SER H H N N 321 SER H2 H N N 322 SER HA H N N 323 SER HB2 H N N 324 SER HB3 H N N 325 SER HG H N N 326 SER HXT H N N 327 THR N N N N 328 THR CA C N S 329 THR C C N N 330 THR O O N N 331 THR CB C N R 332 THR OG1 O N N 333 THR CG2 C N N 334 THR OXT O N N 335 THR H H N N 336 THR H2 H N N 337 THR HA H N N 338 THR HB H N N 339 THR HG1 H N N 340 THR HG21 H N N 341 THR HG22 H N N 342 THR HG23 H N N 343 THR HXT H N N 344 TRP N N N N 345 TRP CA C N S 346 TRP C C N N 347 TRP O O N N 348 TRP CB C N N 349 TRP CG C Y N 350 TRP CD1 C Y N 351 TRP CD2 C Y N 352 TRP NE1 N Y N 353 TRP CE2 C Y N 354 TRP CE3 C Y N 355 TRP CZ2 C Y N 356 TRP CZ3 C Y N 357 TRP CH2 C Y N 358 TRP OXT O N N 359 TRP H H N N 360 TRP H2 H N N 361 TRP HA H N N 362 TRP HB2 H N N 363 TRP HB3 H N N 364 TRP HD1 H N N 365 TRP HE1 H N N 366 TRP HE3 H N N 367 TRP HZ2 H N N 368 TRP HZ3 H N N 369 TRP HH2 H N N 370 TRP HXT H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 ZN ZN ZN N N 415 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6T4 O C2 doub N N 1 6T4 S C5 sing Y N 2 6T4 S C3 sing Y N 3 6T4 C5 C4 doub Y N 4 6T4 C2 C1 sing N N 5 6T4 C2 N sing N N 6 6T4 C4 C6 sing N N 7 6T4 C4 N1 sing Y N 8 6T4 C3 N sing N N 9 6T4 C3 N1 doub Y N 10 6T4 C1 H4 sing N N 11 6T4 C1 H3 sing N N 12 6T4 C1 H1 sing N N 13 6T4 C5 H6 sing N N 14 6T4 C6 H7 sing N N 15 6T4 C6 H9 sing N N 16 6T4 C6 H8 sing N N 17 6T4 N H5 sing N N 18 ALA N CA sing N N 19 ALA N H sing N N 20 ALA N H2 sing N N 21 ALA CA C sing N N 22 ALA CA CB sing N N 23 ALA CA HA sing N N 24 ALA C O doub N N 25 ALA C OXT sing N N 26 ALA CB HB1 sing N N 27 ALA CB HB2 sing N N 28 ALA CB HB3 sing N N 29 ALA OXT HXT sing N N 30 ARG N CA sing N N 31 ARG N H sing N N 32 ARG N H2 sing N N 33 ARG CA C sing N N 34 ARG CA CB sing N N 35 ARG CA HA sing N N 36 ARG C O doub N N 37 ARG C OXT sing N N 38 ARG CB CG sing N N 39 ARG CB HB2 sing N N 40 ARG CB HB3 sing N N 41 ARG CG CD sing N N 42 ARG CG HG2 sing N N 43 ARG CG HG3 sing N N 44 ARG CD NE sing N N 45 ARG CD HD2 sing N N 46 ARG CD HD3 sing N N 47 ARG NE CZ sing N N 48 ARG NE HE sing N N 49 ARG CZ NH1 sing N N 50 ARG CZ NH2 doub N N 51 ARG NH1 HH11 sing N N 52 ARG NH1 HH12 sing N N 53 ARG NH2 HH21 sing N N 54 ARG NH2 HH22 sing N N 55 ARG OXT HXT sing N N 56 ASN N CA sing N N 57 ASN N H sing N N 58 ASN N H2 sing N N 59 ASN CA C sing N N 60 ASN CA CB sing N N 61 ASN CA HA sing N N 62 ASN C O doub N N 63 ASN C OXT sing N N 64 ASN CB CG sing N N 65 ASN CB HB2 sing N N 66 ASN CB HB3 sing N N 67 ASN CG OD1 doub N N 68 ASN CG ND2 sing N N 69 ASN ND2 HD21 sing N N 70 ASN ND2 HD22 sing N N 71 ASN OXT HXT sing N N 72 ASP N CA sing N N 73 ASP N H sing N N 74 ASP N H2 sing N N 75 ASP CA C sing N N 76 ASP CA CB sing N N 77 ASP CA HA sing N N 78 ASP C O doub N N 79 ASP C OXT sing N N 80 ASP CB CG sing N N 81 ASP CB HB2 sing N N 82 ASP CB HB3 sing N N 83 ASP CG OD1 doub N N 84 ASP CG OD2 sing N N 85 ASP OD2 HD2 sing N N 86 ASP OXT HXT sing N N 87 CYS N CA sing N N 88 CYS N H sing N N 89 CYS N H2 sing N N 90 CYS CA C sing N N 91 CYS CA CB sing N N 92 CYS CA HA sing N N 93 CYS C O doub N N 94 CYS C OXT sing N N 95 CYS CB SG sing N N 96 CYS CB HB2 sing N N 97 CYS CB HB3 sing N N 98 CYS SG HG sing N N 99 CYS OXT HXT sing N N 100 FMT C O1 doub N N 101 FMT C O2 sing N N 102 FMT C H sing N N 103 FMT O2 HO2 sing N N 104 GLN N CA sing N N 105 GLN N H sing N N 106 GLN N H2 sing N N 107 GLN CA C sing N N 108 GLN CA CB sing N N 109 GLN CA HA sing N N 110 GLN C O doub N N 111 GLN C OXT sing N N 112 GLN CB CG sing N N 113 GLN CB HB2 sing N N 114 GLN CB HB3 sing N N 115 GLN CG CD sing N N 116 GLN CG HG2 sing N N 117 GLN CG HG3 sing N N 118 GLN CD OE1 doub N N 119 GLN CD NE2 sing N N 120 GLN NE2 HE21 sing N N 121 GLN NE2 HE22 sing N N 122 GLN OXT HXT sing N N 123 GLU N CA sing N N 124 GLU N H sing N N 125 GLU N H2 sing N N 126 GLU CA C sing N N 127 GLU CA CB sing N N 128 GLU CA HA sing N N 129 GLU C O doub N N 130 GLU C OXT sing N N 131 GLU CB CG sing N N 132 GLU CB HB2 sing N N 133 GLU CB HB3 sing N N 134 GLU CG CD sing N N 135 GLU CG HG2 sing N N 136 GLU CG HG3 sing N N 137 GLU CD OE1 doub N N 138 GLU CD OE2 sing N N 139 GLU OE2 HE2 sing N N 140 GLU OXT HXT sing N N 141 GLY N CA sing N N 142 GLY N H sing N N 143 GLY N H2 sing N N 144 GLY CA C sing N N 145 GLY CA HA2 sing N N 146 GLY CA HA3 sing N N 147 GLY C O doub N N 148 GLY C OXT sing N N 149 GLY OXT HXT sing N N 150 HIS N CA sing N N 151 HIS N H sing N N 152 HIS N H2 sing N N 153 HIS CA C sing N N 154 HIS CA CB sing N N 155 HIS CA HA sing N N 156 HIS C O doub N N 157 HIS C OXT sing N N 158 HIS CB CG sing N N 159 HIS CB HB2 sing N N 160 HIS CB HB3 sing N N 161 HIS CG ND1 sing Y N 162 HIS CG CD2 doub Y N 163 HIS ND1 CE1 doub Y N 164 HIS ND1 HD1 sing N N 165 HIS CD2 NE2 sing Y N 166 HIS CD2 HD2 sing N N 167 HIS CE1 NE2 sing Y N 168 HIS CE1 HE1 sing N N 169 HIS NE2 HE2 sing N N 170 HIS OXT HXT sing N N 171 HOH O H1 sing N N 172 HOH O H2 sing N N 173 ILE N CA sing N N 174 ILE N H sing N N 175 ILE N H2 sing N N 176 ILE CA C sing N N 177 ILE CA CB sing N N 178 ILE CA HA sing N N 179 ILE C O doub N N 180 ILE C OXT sing N N 181 ILE CB CG1 sing N N 182 ILE CB CG2 sing N N 183 ILE CB HB sing N N 184 ILE CG1 CD1 sing N N 185 ILE CG1 HG12 sing N N 186 ILE CG1 HG13 sing N N 187 ILE CG2 HG21 sing N N 188 ILE CG2 HG22 sing N N 189 ILE CG2 HG23 sing N N 190 ILE CD1 HD11 sing N N 191 ILE CD1 HD12 sing N N 192 ILE CD1 HD13 sing N N 193 ILE OXT HXT sing N N 194 LEU N CA sing N N 195 LEU N H sing N N 196 LEU N H2 sing N N 197 LEU CA C sing N N 198 LEU CA CB sing N N 199 LEU CA HA sing N N 200 LEU C O doub N N 201 LEU C OXT sing N N 202 LEU CB CG sing N N 203 LEU CB HB2 sing N N 204 LEU CB HB3 sing N N 205 LEU CG CD1 sing N N 206 LEU CG CD2 sing N N 207 LEU CG HG sing N N 208 LEU CD1 HD11 sing N N 209 LEU CD1 HD12 sing N N 210 LEU CD1 HD13 sing N N 211 LEU CD2 HD21 sing N N 212 LEU CD2 HD22 sing N N 213 LEU CD2 HD23 sing N N 214 LEU OXT HXT sing N N 215 LYS N CA sing N N 216 LYS N H sing N N 217 LYS N H2 sing N N 218 LYS CA C sing N N 219 LYS CA CB sing N N 220 LYS CA HA sing N N 221 LYS C O doub N N 222 LYS C OXT sing N N 223 LYS CB CG sing N N 224 LYS CB HB2 sing N N 225 LYS CB HB3 sing N N 226 LYS CG CD sing N N 227 LYS CG HG2 sing N N 228 LYS CG HG3 sing N N 229 LYS CD CE sing N N 230 LYS CD HD2 sing N N 231 LYS CD HD3 sing N N 232 LYS CE NZ sing N N 233 LYS CE HE2 sing N N 234 LYS CE HE3 sing N N 235 LYS NZ HZ1 sing N N 236 LYS NZ HZ2 sing N N 237 LYS NZ HZ3 sing N N 238 LYS OXT HXT sing N N 239 MET N CA sing N N 240 MET N H sing N N 241 MET N H2 sing N N 242 MET CA C sing N N 243 MET CA CB sing N N 244 MET CA HA sing N N 245 MET C O doub N N 246 MET C OXT sing N N 247 MET CB CG sing N N 248 MET CB HB2 sing N N 249 MET CB HB3 sing N N 250 MET CG SD sing N N 251 MET CG HG2 sing N N 252 MET CG HG3 sing N N 253 MET SD CE sing N N 254 MET CE HE1 sing N N 255 MET CE HE2 sing N N 256 MET CE HE3 sing N N 257 MET OXT HXT sing N N 258 PHE N CA sing N N 259 PHE N H sing N N 260 PHE N H2 sing N N 261 PHE CA C sing N N 262 PHE CA CB sing N N 263 PHE CA HA sing N N 264 PHE C O doub N N 265 PHE C OXT sing N N 266 PHE CB CG sing N N 267 PHE CB HB2 sing N N 268 PHE CB HB3 sing N N 269 PHE CG CD1 doub Y N 270 PHE CG CD2 sing Y N 271 PHE CD1 CE1 sing Y N 272 PHE CD1 HD1 sing N N 273 PHE CD2 CE2 doub Y N 274 PHE CD2 HD2 sing N N 275 PHE CE1 CZ doub Y N 276 PHE CE1 HE1 sing N N 277 PHE CE2 CZ sing Y N 278 PHE CE2 HE2 sing N N 279 PHE CZ HZ sing N N 280 PHE OXT HXT sing N N 281 PRO N CA sing N N 282 PRO N CD sing N N 283 PRO N H sing N N 284 PRO CA C sing N N 285 PRO CA CB sing N N 286 PRO CA HA sing N N 287 PRO C O doub N N 288 PRO C OXT sing N N 289 PRO CB CG sing N N 290 PRO CB HB2 sing N N 291 PRO CB HB3 sing N N 292 PRO CG CD sing N N 293 PRO CG HG2 sing N N 294 PRO CG HG3 sing N N 295 PRO CD HD2 sing N N 296 PRO CD HD3 sing N N 297 PRO OXT HXT sing N N 298 SER N CA sing N N 299 SER N H sing N N 300 SER N H2 sing N N 301 SER CA C sing N N 302 SER CA CB sing N N 303 SER CA HA sing N N 304 SER C O doub N N 305 SER C OXT sing N N 306 SER CB OG sing N N 307 SER CB HB2 sing N N 308 SER CB HB3 sing N N 309 SER OG HG sing N N 310 SER OXT HXT sing N N 311 THR N CA sing N N 312 THR N H sing N N 313 THR N H2 sing N N 314 THR CA C sing N N 315 THR CA CB sing N N 316 THR CA HA sing N N 317 THR C O doub N N 318 THR C OXT sing N N 319 THR CB OG1 sing N N 320 THR CB CG2 sing N N 321 THR CB HB sing N N 322 THR OG1 HG1 sing N N 323 THR CG2 HG21 sing N N 324 THR CG2 HG22 sing N N 325 THR CG2 HG23 sing N N 326 THR OXT HXT sing N N 327 TRP N CA sing N N 328 TRP N H sing N N 329 TRP N H2 sing N N 330 TRP CA C sing N N 331 TRP CA CB sing N N 332 TRP CA HA sing N N 333 TRP C O doub N N 334 TRP C OXT sing N N 335 TRP CB CG sing N N 336 TRP CB HB2 sing N N 337 TRP CB HB3 sing N N 338 TRP CG CD1 doub Y N 339 TRP CG CD2 sing Y N 340 TRP CD1 NE1 sing Y N 341 TRP CD1 HD1 sing N N 342 TRP CD2 CE2 doub Y N 343 TRP CD2 CE3 sing Y N 344 TRP NE1 CE2 sing Y N 345 TRP NE1 HE1 sing N N 346 TRP CE2 CZ2 sing Y N 347 TRP CE3 CZ3 doub Y N 348 TRP CE3 HE3 sing N N 349 TRP CZ2 CH2 doub Y N 350 TRP CZ2 HZ2 sing N N 351 TRP CZ3 CH2 sing Y N 352 TRP CZ3 HZ3 sing N N 353 TRP CH2 HH2 sing N N 354 TRP OXT HXT sing N N 355 TYR N CA sing N N 356 TYR N H sing N N 357 TYR N H2 sing N N 358 TYR CA C sing N N 359 TYR CA CB sing N N 360 TYR CA HA sing N N 361 TYR C O doub N N 362 TYR C OXT sing N N 363 TYR CB CG sing N N 364 TYR CB HB2 sing N N 365 TYR CB HB3 sing N N 366 TYR CG CD1 doub Y N 367 TYR CG CD2 sing Y N 368 TYR CD1 CE1 sing Y N 369 TYR CD1 HD1 sing N N 370 TYR CD2 CE2 doub Y N 371 TYR CD2 HD2 sing N N 372 TYR CE1 CZ doub Y N 373 TYR CE1 HE1 sing N N 374 TYR CE2 CZ sing Y N 375 TYR CE2 HE2 sing N N 376 TYR CZ OH sing N N 377 TYR OH HH sing N N 378 TYR OXT HXT sing N N 379 VAL N CA sing N N 380 VAL N H sing N N 381 VAL N H2 sing N N 382 VAL CA C sing N N 383 VAL CA CB sing N N 384 VAL CA HA sing N N 385 VAL C O doub N N 386 VAL C OXT sing N N 387 VAL CB CG1 sing N N 388 VAL CB CG2 sing N N 389 VAL CB HB sing N N 390 VAL CG1 HG11 sing N N 391 VAL CG1 HG12 sing N N 392 VAL CG1 HG13 sing N N 393 VAL CG2 HG21 sing N N 394 VAL CG2 HG22 sing N N 395 VAL CG2 HG23 sing N N 396 VAL OXT HXT sing N N 397 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'FORMIC ACID' FMT 4 '~{N}-(4-methyl-1,3-thiazol-2-yl)ethanamide' 6T4 5 'UNKNOWN ATOM OR ION' UNX 6 'SODIUM ION' NA 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3C5K _pdbx_initial_refinement_model.details 'pdbid 3C5K' #