HEADER HYDROLASE 22-MAY-15 5BMO TITLE LNMX PROTEIN, A PUTATIVE GLCNAC-PI DE-N-ACETYLASE FROM STREPTOMYCES TITLE 2 ATROOLIVACEUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN LNMX; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PUTATIVE GLCNAC-PI DE-N-ACETYLASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES ATROOLIVACEUS; SOURCE 3 ORGANISM_TAXID: 66869; SOURCE 4 GENE: LNMX; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG73 KEYWDS LNMX, LMBE FAMILY, GLCNAC-PI DE-N-ACETYLASE, STRUCTURAL GENOMICS, KEYWDS 2 APC109447, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, PSI- KEYWDS 3 BIOLOGY, ENZYME DISCOVERY FOR NATURAL PRODUCT BIOSYNTHESIS, NATPRO, KEYWDS 4 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,C.HATZOS-SKINTGES,M.CUFF,M.ENDRES,G.BABNIGG,J.LOHMAN,M.MA, AUTHOR 2 J.RUDOLF,C.-Y.CHANG,B.SHEN,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (MCSG),ENZYME DISCOVERY FOR NATURAL PRODUCT AUTHOR 4 BIOSYNTHESIS (NATPRO) REVDAT 4 27-SEP-23 5BMO 1 LINK REVDAT 3 25-DEC-19 5BMO 1 REMARK REVDAT 2 27-SEP-17 5BMO 1 SOURCE KEYWDS REMARK REVDAT 1 10-JUN-15 5BMO 0 JRNL AUTH J.OSIPIUK,C.HATZOS-SKINTGES,M.CUFF,M.ENDRES,G.BABNIGG, JRNL AUTH 2 J.LOHMAN,M.MA,J.RUDOLF,C.-Y.CHANG,B.SHEN,A.JOACHIMIAK, JRNL AUTH 3 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG), JRNL AUTH 4 ENZYME DISCOVERY FOR NATURAL PRODUCT BIOSYNTHESIS (NATPRO) JRNL TITL LNMX PROTEIN, A PUTATIVE GLCNAC-PI DE-N-ACETYLASE FROM JRNL TITL 2 STREPTOMYCES ATROOLIVACEUS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 55454 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2924 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.92 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3989 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 218 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5559 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 301 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.60000 REMARK 3 B22 (A**2) : -1.60000 REMARK 3 B33 (A**2) : 3.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.141 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.109 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.725 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5754 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5377 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7855 ; 1.494 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12282 ; 0.797 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 734 ; 5.479 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 296 ;32.838 ;22.568 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 832 ;14.179 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 68 ;18.152 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 848 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6735 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1407 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2906 ; 2.078 ; 2.581 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2904 ; 2.075 ; 2.580 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3627 ; 2.977 ; 3.854 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 301 REMARK 3 ORIGIN FOR THE GROUP (A): 30.7143 42.7785 14.1728 REMARK 3 T TENSOR REMARK 3 T11: 0.0648 T22: 0.1315 REMARK 3 T33: 0.0295 T12: -0.0189 REMARK 3 T13: 0.0256 T23: -0.0392 REMARK 3 L TENSOR REMARK 3 L11: 1.6161 L22: 1.1656 REMARK 3 L33: 0.5397 L12: 0.0872 REMARK 3 L13: 0.0436 L23: -0.3211 REMARK 3 S TENSOR REMARK 3 S11: 0.0278 S12: -0.0289 S13: -0.0882 REMARK 3 S21: 0.0221 S22: -0.0186 S23: -0.0017 REMARK 3 S31: -0.0378 S32: 0.1301 S33: -0.0092 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 301 REMARK 3 ORIGIN FOR THE GROUP (A): 1.0054 63.7364 13.8500 REMARK 3 T TENSOR REMARK 3 T11: 0.1274 T22: 0.0872 REMARK 3 T33: 0.0203 T12: -0.0328 REMARK 3 T13: 0.0356 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 0.8084 L22: 0.8708 REMARK 3 L33: 0.5629 L12: -0.2149 REMARK 3 L13: -0.0298 L23: -0.0621 REMARK 3 S TENSOR REMARK 3 S11: -0.0186 S12: 0.0585 S13: 0.0606 REMARK 3 S21: -0.0634 S22: 0.0139 S23: -0.0140 REMARK 3 S31: -0.0746 S32: -0.1036 S33: 0.0046 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 301 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3099 30.8711 28.7305 REMARK 3 T TENSOR REMARK 3 T11: 0.1177 T22: 0.1416 REMARK 3 T33: 0.0772 T12: -0.0183 REMARK 3 T13: 0.0085 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.9332 L22: 1.4752 REMARK 3 L33: 0.7656 L12: -0.2208 REMARK 3 L13: -0.3349 L23: 0.0877 REMARK 3 S TENSOR REMARK 3 S11: -0.0699 S12: -0.3479 S13: -0.2562 REMARK 3 S21: 0.2334 S22: 0.0152 S23: -0.1564 REMARK 3 S31: 0.1673 S32: 0.1181 S33: 0.0547 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5BMO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000210177. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58503 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.69900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.990 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: 3WL4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 0.8 M SODIUM REMARK 280 PHOSPHATE, 1.2 DI-POTASSIUM PHOSPHATE, PH 4.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 142.22900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.99900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.99900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 213.34350 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.99900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.99900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 71.11450 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.99900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.99900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 213.34350 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.99900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.99900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 71.11450 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 142.22900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 GLY B 243 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 GLY C 243 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 433 O HOH B 491 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 10 46.83 -108.59 REMARK 500 ASP A 23 -24.37 93.06 REMARK 500 ASN A 120 117.54 -29.26 REMARK 500 ASP B 23 -26.78 96.28 REMARK 500 ALA B 29 6.77 -152.92 REMARK 500 ASN B 120 118.18 -27.51 REMARK 500 HIS B 178 55.42 -118.24 REMARK 500 PHE B 231 42.39 -141.41 REMARK 500 ASP C 11 57.97 -98.99 REMARK 500 ASP C 23 -30.82 93.39 REMARK 500 HIS C 88 1.90 83.75 REMARK 500 ASN C 120 113.59 -30.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 300 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 24 OD1 REMARK 620 2 ASP A 24 OD2 48.9 REMARK 620 3 HOH A 513 O 108.6 156.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 300 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 24 OD1 REMARK 620 2 ASP B 24 OD2 49.4 REMARK 620 3 HOH B 498 O 96.9 145.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 300 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 24 OD1 REMARK 620 2 ASP C 24 OD2 48.7 REMARK 620 3 HOH C 477 O 105.6 153.2 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K C 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT C 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC109447 RELATED DB: TARGETTRACK DBREF 5BMO A 1 243 UNP Q8GGM8 Q8GGM8_STRAZ 1 243 DBREF 5BMO B 1 243 UNP Q8GGM8 Q8GGM8_STRAZ 1 243 DBREF 5BMO C 1 243 UNP Q8GGM8 Q8GGM8_STRAZ 1 243 SEQADV 5BMO SER A -2 UNP Q8GGM8 EXPRESSION TAG SEQADV 5BMO ASN A -1 UNP Q8GGM8 EXPRESSION TAG SEQADV 5BMO ALA A 0 UNP Q8GGM8 EXPRESSION TAG SEQADV 5BMO SER B -2 UNP Q8GGM8 EXPRESSION TAG SEQADV 5BMO ASN B -1 UNP Q8GGM8 EXPRESSION TAG SEQADV 5BMO ALA B 0 UNP Q8GGM8 EXPRESSION TAG SEQADV 5BMO SER C -2 UNP Q8GGM8 EXPRESSION TAG SEQADV 5BMO ASN C -1 UNP Q8GGM8 EXPRESSION TAG SEQADV 5BMO ALA C 0 UNP Q8GGM8 EXPRESSION TAG SEQRES 1 A 246 SER ASN ALA MET ALA ASP THR LEU LEU GLU LEU PRO ASP SEQRES 2 A 246 ASP PHE SER ARG VAL LEU ALA ILE VAL ALA HIS PRO ASP SEQRES 3 A 246 ASP ILE GLU PHE GLY ALA GLY PRO ALA VAL ALA GLN TRP SEQRES 4 A 246 THR ALA GLN GLY ARG GLU VAL ALA TYR LEU LEU VAL THR SEQRES 5 A 246 ARG GLY GLU ALA GLY ILE SER ASP LEU GLU PRO ALA GLN SEQRES 6 A 246 CYS GLY PRO VAL ARG GLU ALA GLU GLN ARG LYS ALA ALA SEQRES 7 A 246 ALA GLU LEU GLY VAL HIS GLU VAL ASP PHE LEU ASP HIS SEQRES 8 A 246 TYR ASN ASP GLY THR ILE GLU TYR GLY PRO GLY LEU ARG SEQRES 9 A 246 ARG ASP LEU ALA ARG ALA VAL ARG ARG HIS ARG PRO GLU SEQRES 10 A 246 LEU ILE VAL THR PHE ASN HIS HIS ASP THR TRP ALA SER SEQRES 11 A 246 GLY ALA TRP ASN THR PRO ASP HIS ARG ALA VAL GLY LEU SEQRES 12 A 246 ALA ALA LEU ASP ALA VAL ALA ASP ALA ALA ASN ARG TRP SEQRES 13 A 246 ILE PHE PRO GLU LEU LEU ASP GLU GLY LEU GLU PRO TRP SEQRES 14 A 246 ARG ALA GLY LYS VAL ALA ILE ALA GLY SER PRO HIS ALA SEQRES 15 A 246 THR HIS ALA VAL ALA VAL ASP ASP ASP SER ARG ASP ARG SEQRES 16 A 246 ALA VAL ARG SER LEU ALA ALA HIS ASP ARG TYR LEU GLY SEQRES 17 A 246 SER LEU SER ASP ASP PRO PRO GLN GLU ARG ALA ARG PHE SEQRES 18 A 246 ILE LEU GLY HIS LEU LEU ALA ALA THR ALA PRO ARG PHE SEQRES 19 A 246 GLY GLY ARG ASP GLY VAL ALA PHE GLN ILE VAL GLY SEQRES 1 B 246 SER ASN ALA MET ALA ASP THR LEU LEU GLU LEU PRO ASP SEQRES 2 B 246 ASP PHE SER ARG VAL LEU ALA ILE VAL ALA HIS PRO ASP SEQRES 3 B 246 ASP ILE GLU PHE GLY ALA GLY PRO ALA VAL ALA GLN TRP SEQRES 4 B 246 THR ALA GLN GLY ARG GLU VAL ALA TYR LEU LEU VAL THR SEQRES 5 B 246 ARG GLY GLU ALA GLY ILE SER ASP LEU GLU PRO ALA GLN SEQRES 6 B 246 CYS GLY PRO VAL ARG GLU ALA GLU GLN ARG LYS ALA ALA SEQRES 7 B 246 ALA GLU LEU GLY VAL HIS GLU VAL ASP PHE LEU ASP HIS SEQRES 8 B 246 TYR ASN ASP GLY THR ILE GLU TYR GLY PRO GLY LEU ARG SEQRES 9 B 246 ARG ASP LEU ALA ARG ALA VAL ARG ARG HIS ARG PRO GLU SEQRES 10 B 246 LEU ILE VAL THR PHE ASN HIS HIS ASP THR TRP ALA SER SEQRES 11 B 246 GLY ALA TRP ASN THR PRO ASP HIS ARG ALA VAL GLY LEU SEQRES 12 B 246 ALA ALA LEU ASP ALA VAL ALA ASP ALA ALA ASN ARG TRP SEQRES 13 B 246 ILE PHE PRO GLU LEU LEU ASP GLU GLY LEU GLU PRO TRP SEQRES 14 B 246 ARG ALA GLY LYS VAL ALA ILE ALA GLY SER PRO HIS ALA SEQRES 15 B 246 THR HIS ALA VAL ALA VAL ASP ASP ASP SER ARG ASP ARG SEQRES 16 B 246 ALA VAL ARG SER LEU ALA ALA HIS ASP ARG TYR LEU GLY SEQRES 17 B 246 SER LEU SER ASP ASP PRO PRO GLN GLU ARG ALA ARG PHE SEQRES 18 B 246 ILE LEU GLY HIS LEU LEU ALA ALA THR ALA PRO ARG PHE SEQRES 19 B 246 GLY GLY ARG ASP GLY VAL ALA PHE GLN ILE VAL GLY SEQRES 1 C 246 SER ASN ALA MET ALA ASP THR LEU LEU GLU LEU PRO ASP SEQRES 2 C 246 ASP PHE SER ARG VAL LEU ALA ILE VAL ALA HIS PRO ASP SEQRES 3 C 246 ASP ILE GLU PHE GLY ALA GLY PRO ALA VAL ALA GLN TRP SEQRES 4 C 246 THR ALA GLN GLY ARG GLU VAL ALA TYR LEU LEU VAL THR SEQRES 5 C 246 ARG GLY GLU ALA GLY ILE SER ASP LEU GLU PRO ALA GLN SEQRES 6 C 246 CYS GLY PRO VAL ARG GLU ALA GLU GLN ARG LYS ALA ALA SEQRES 7 C 246 ALA GLU LEU GLY VAL HIS GLU VAL ASP PHE LEU ASP HIS SEQRES 8 C 246 TYR ASN ASP GLY THR ILE GLU TYR GLY PRO GLY LEU ARG SEQRES 9 C 246 ARG ASP LEU ALA ARG ALA VAL ARG ARG HIS ARG PRO GLU SEQRES 10 C 246 LEU ILE VAL THR PHE ASN HIS HIS ASP THR TRP ALA SER SEQRES 11 C 246 GLY ALA TRP ASN THR PRO ASP HIS ARG ALA VAL GLY LEU SEQRES 12 C 246 ALA ALA LEU ASP ALA VAL ALA ASP ALA ALA ASN ARG TRP SEQRES 13 C 246 ILE PHE PRO GLU LEU LEU ASP GLU GLY LEU GLU PRO TRP SEQRES 14 C 246 ARG ALA GLY LYS VAL ALA ILE ALA GLY SER PRO HIS ALA SEQRES 15 C 246 THR HIS ALA VAL ALA VAL ASP ASP ASP SER ARG ASP ARG SEQRES 16 C 246 ALA VAL ARG SER LEU ALA ALA HIS ASP ARG TYR LEU GLY SEQRES 17 C 246 SER LEU SER ASP ASP PRO PRO GLN GLU ARG ALA ARG PHE SEQRES 18 C 246 ILE LEU GLY HIS LEU LEU ALA ALA THR ALA PRO ARG PHE SEQRES 19 C 246 GLY GLY ARG ASP GLY VAL ALA PHE GLN ILE VAL GLY HET K A 300 1 HET ACT A 301 4 HET K B 300 1 HET ACT B 301 4 HET K C 300 1 HET ACT C 301 4 HETNAM K POTASSIUM ION HETNAM ACT ACETATE ION FORMUL 4 K 3(K 1+) FORMUL 5 ACT 3(C2 H3 O2 1-) FORMUL 10 HOH *301(H2 O) HELIX 1 AA1 ASP A 23 ALA A 29 1 7 HELIX 2 AA2 ALA A 29 GLN A 39 1 11 HELIX 3 AA3 GLU A 59 LEU A 78 1 20 HELIX 4 AA4 GLY A 97 ARG A 112 1 16 HELIX 5 AA5 THR A 132 ASN A 151 1 20 HELIX 6 AA6 PRO A 156 GLU A 161 1 6 HELIX 7 AA7 ASP A 186 ALA A 199 1 14 HELIX 8 AA8 HIS A 200 SER A 206 1 7 HELIX 9 AA9 PRO A 211 ALA A 228 1 18 HELIX 10 AB1 PRO A 229 PHE A 231 5 3 HELIX 11 AB2 ASP B 23 GLN B 39 1 17 HELIX 12 AB3 GLU B 59 LEU B 78 1 20 HELIX 13 AB4 GLY B 97 ARG B 112 1 16 HELIX 14 AB5 THR B 132 ASN B 151 1 20 HELIX 15 AB6 PRO B 156 GLU B 161 1 6 HELIX 16 AB7 ASP B 186 ALA B 199 1 14 HELIX 17 AB8 HIS B 200 SER B 208 1 9 HELIX 18 AB9 PRO B 211 ALA B 228 1 18 HELIX 19 AC1 PRO B 229 PHE B 231 5 3 HELIX 20 AC2 ASP C 23 GLN C 39 1 17 HELIX 21 AC3 GLU C 59 LEU C 78 1 20 HELIX 22 AC4 GLY C 97 ARG C 112 1 16 HELIX 23 AC5 THR C 132 ASN C 151 1 20 HELIX 24 AC6 PRO C 156 GLU C 161 1 6 HELIX 25 AC7 ASP C 186 ALA C 199 1 14 HELIX 26 AC8 HIS C 200 SER C 208 1 9 HELIX 27 AC9 PRO C 211 ALA C 226 1 16 HELIX 28 AD1 THR C 227 PHE C 231 5 5 SHEET 1 AA1 8 LEU A 6 GLU A 7 0 SHEET 2 AA1 8 HIS A 181 ALA A 184 1 O ALA A 182 N LEU A 6 SHEET 3 AA1 8 GLY A 236 VAL A 242 -1 O PHE A 239 N HIS A 181 SHEET 4 AA1 8 LYS A 170 ALA A 174 -1 N ILE A 173 O GLN A 240 SHEET 5 AA1 8 LEU A 115 PHE A 119 1 N THR A 118 O ALA A 174 SHEET 6 AA1 8 ARG A 14 VAL A 19 1 N ILE A 18 O VAL A 117 SHEET 7 AA1 8 GLU A 42 LEU A 47 1 O LEU A 46 N ALA A 17 SHEET 8 AA1 8 GLU A 82 PHE A 85 1 O ASP A 84 N LEU A 47 SHEET 1 AA2 8 LEU B 6 GLU B 7 0 SHEET 2 AA2 8 HIS B 181 ALA B 184 1 O ALA B 182 N LEU B 6 SHEET 3 AA2 8 GLY B 236 VAL B 242 -1 O PHE B 239 N HIS B 181 SHEET 4 AA2 8 LYS B 170 ALA B 174 -1 N ILE B 173 O GLN B 240 SHEET 5 AA2 8 LEU B 115 PHE B 119 1 N THR B 118 O ALA B 174 SHEET 6 AA2 8 ARG B 14 VAL B 19 1 N ILE B 18 O VAL B 117 SHEET 7 AA2 8 GLU B 42 LEU B 47 1 O LEU B 46 N ALA B 17 SHEET 8 AA2 8 VAL B 83 PHE B 85 1 O ASP B 84 N TYR B 45 SHEET 1 AA3 8 LEU C 6 GLU C 7 0 SHEET 2 AA3 8 HIS C 181 ALA C 184 1 O ALA C 182 N LEU C 6 SHEET 3 AA3 8 GLY C 236 VAL C 242 -1 O PHE C 239 N HIS C 181 SHEET 4 AA3 8 LYS C 170 ALA C 174 -1 N ILE C 173 O GLN C 240 SHEET 5 AA3 8 LEU C 115 PHE C 119 1 N THR C 118 O ALA C 174 SHEET 6 AA3 8 ARG C 14 VAL C 19 1 N ILE C 18 O VAL C 117 SHEET 7 AA3 8 GLU C 42 LEU C 47 1 O GLU C 42 N VAL C 15 SHEET 8 AA3 8 GLU C 82 PHE C 85 1 O ASP C 84 N LEU C 47 LINK OD1 ASP A 24 K K A 300 1555 1555 2.01 LINK OD2 ASP A 24 K K A 300 1555 1555 2.90 LINK K K A 300 O HOH A 513 1555 1555 2.67 LINK OD1 ASP B 24 K K B 300 1555 1555 2.12 LINK OD2 ASP B 24 K K B 300 1555 1555 2.91 LINK K K B 300 O HOH B 498 1555 1555 2.48 LINK OD1 ASP C 24 K K C 300 1555 1555 2.10 LINK OD2 ASP C 24 K K C 300 1555 1555 2.91 LINK K K C 300 O HOH C 477 1555 1555 2.31 SITE 1 AC1 4 HIS A 21 ASP A 24 HIS A 135 HOH A 513 SITE 1 AC2 4 GLY A 51 GLY A 54 ASP A 91 HOH A 431 SITE 1 AC3 4 HIS B 21 ASP B 24 HIS B 135 HOH B 498 SITE 1 AC4 3 GLY B 54 ASP B 91 HOH B 483 SITE 1 AC5 4 HIS C 21 ASP C 24 HIS C 135 HOH C 477 SITE 1 AC6 2 ASP C 91 HOH C 470 CRYST1 71.998 71.998 284.458 90.00 90.00 90.00 P 43 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013889 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013889 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003515 0.00000