HEADER ISOMERASE 22-MAY-15 5BMP TITLE CRYSTAL STRUCTURE OF PHOSPHOGLUCOMUTASE FROM XANTHOMONAS CITRI TITLE 2 COMPLEXED WITH GLUCOSE-1-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOGLUCOMUTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.4.2.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS AXONOPODIS PV. CITRI (STRAIN 306); SOURCE 3 ORGANISM_TAXID: 190486; SOURCE 4 STRAIN: 306; SOURCE 5 GENE: XANA, XAC3579; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PHOSPHOGLUCOMUTASE CITRUS CANKER, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.S.GOTO,H.M.PEREIRA,M.T.M.NOVO MANSUR REVDAT 6 27-SEP-23 5BMP 1 HETSYN REVDAT 5 29-JUL-20 5BMP 1 COMPND REMARK HETNAM SITE REVDAT 4 22-NOV-17 5BMP 1 JRNL REMARK REVDAT 3 28-SEP-16 5BMP 1 JRNL REVDAT 2 07-SEP-16 5BMP 1 JRNL REVDAT 1 01-JUN-16 5BMP 0 JRNL AUTH L.S.GOTO,A.VESSONI ALEXANDRINO,C.MALVESSI PEREIRA, JRNL AUTH 2 C.SILVA MARTINS,H.D'MUNIZ PEREIRA,J.BRANDAO-NETO, JRNL AUTH 3 M.T.MARQUES NOVO-MANSUR JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THE JRNL TITL 2 PHOSPHOGLUCOMUTASE FROM XANTHOMONAS CITRI SUBSP. CITRI. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1864 1658 2016 JRNL REFN ISSN 0006-3002 JRNL PMID 27567706 JRNL DOI 10.1016/J.BBAPAP.2016.08.014 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 36037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1802 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.0000 - 4.3328 0.99 2832 150 0.1439 0.1456 REMARK 3 2 4.3328 - 3.4452 0.99 2714 143 0.1288 0.1486 REMARK 3 3 3.4452 - 3.0115 0.99 2694 141 0.1549 0.1802 REMARK 3 4 3.0115 - 2.7369 0.99 2643 139 0.1613 0.2108 REMARK 3 5 2.7369 - 2.5412 1.00 2691 142 0.1592 0.1938 REMARK 3 6 2.5412 - 2.3917 1.00 2662 140 0.1544 0.1677 REMARK 3 7 2.3917 - 2.2721 1.00 2619 138 0.1560 0.1718 REMARK 3 8 2.2721 - 2.1733 1.00 2655 140 0.1530 0.1932 REMARK 3 9 2.1733 - 2.0897 1.00 2608 137 0.1478 0.1915 REMARK 3 10 2.0897 - 2.0177 1.00 2644 139 0.1558 0.2014 REMARK 3 11 2.0177 - 1.9547 1.00 2618 138 0.1607 0.2078 REMARK 3 12 1.9547 - 1.8988 0.98 2553 134 0.1698 0.2260 REMARK 3 13 1.8988 - 1.8500 0.87 2302 121 0.1863 0.2388 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3545 REMARK 3 ANGLE : 0.866 4814 REMARK 3 CHIRALITY : 0.034 531 REMARK 3 PLANARITY : 0.005 637 REMARK 3 DIHEDRAL : 13.038 1292 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4032 16.0771 -17.2088 REMARK 3 T TENSOR REMARK 3 T11: 0.0787 T22: 0.0745 REMARK 3 T33: 0.0743 T12: -0.0125 REMARK 3 T13: -0.0036 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 0.6083 L22: 1.1617 REMARK 3 L33: 1.7074 L12: 0.2510 REMARK 3 L13: 0.1563 L23: 0.9142 REMARK 3 S TENSOR REMARK 3 S11: -0.0055 S12: -0.0289 S13: 0.0562 REMARK 3 S21: 0.0011 S22: 0.0063 S23: 0.0284 REMARK 3 S31: -0.1480 S32: 0.0415 S33: -0.0091 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 386 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5649 -1.0829 -31.3758 REMARK 3 T TENSOR REMARK 3 T11: 0.0437 T22: 0.0702 REMARK 3 T33: 0.0682 T12: -0.0023 REMARK 3 T13: -0.0021 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.4524 L22: 0.7200 REMARK 3 L33: 0.8494 L12: 0.0486 REMARK 3 L13: 0.2022 L23: -0.2285 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: -0.0310 S13: 0.0108 REMARK 3 S21: 0.0105 S22: -0.0054 S23: -0.0196 REMARK 3 S31: 0.0153 S32: 0.0085 S33: 0.0006 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 387 THROUGH 470 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.5840 -8.1678 -10.6976 REMARK 3 T TENSOR REMARK 3 T11: 0.0697 T22: 0.0809 REMARK 3 T33: 0.0870 T12: 0.0021 REMARK 3 T13: 0.0027 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 0.9152 L22: 1.1781 REMARK 3 L33: 1.5693 L12: -0.1015 REMARK 3 L13: 0.0569 L23: 0.5865 REMARK 3 S TENSOR REMARK 3 S11: -0.0407 S12: -0.1567 S13: 0.0633 REMARK 3 S21: 0.1237 S22: 0.1284 S23: -0.0564 REMARK 3 S31: -0.0021 S32: 0.0833 S33: -0.0412 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BMP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000210062. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : D*TREK, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36037 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 3.130 REMARK 200 R MERGE (I) : 0.02000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 45.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.04100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 22.89 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5BMN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.5 % PEG 1000, 12.5 % PEG 3350, 12.5 REMARK 280 % MPD, 30 MM MGCL2, 30 MM CACL2, 100 MM MES/IMIDAZOL PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.93050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.57150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.36600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.57150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.93050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.36600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3 REMARK 465 GLY A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 SER A 13 REMARK 465 SER A 14 REMARK 465 GLY A 15 REMARK 465 LEU A 16 REMARK 465 VAL A 17 REMARK 465 PRO A 18 REMARK 465 ARG A 19 REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 22 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1168 O HOH A 1189 1.89 REMARK 500 O HOH A 1018 O HOH A 1046 1.90 REMARK 500 O HOH A 847 O HOH A 1008 1.92 REMARK 500 O HOH A 924 O HOH A 1016 1.94 REMARK 500 O HOH A 841 O HOH A 1093 1.99 REMARK 500 OE2 GLU A 276 O HOH A 601 2.01 REMARK 500 O HOH A 838 O HOH A 1068 2.06 REMARK 500 O HOH A 1057 O HOH A 1117 2.07 REMARK 500 O HOH A 908 O HOH A 1015 2.08 REMARK 500 O HOH A 623 O HOH A 1136 2.14 REMARK 500 O HOH A 1011 O HOH A 1136 2.14 REMARK 500 O HOH A 838 O HOH A 1067 2.17 REMARK 500 O HOH A 611 O HOH A 718 2.18 REMARK 500 O HOH A 960 O HOH A 1098 2.19 REMARK 500 O HOH A 658 O HOH A 1046 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 747 O HOH A 980 1455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SEP A 119 -112.18 41.78 REMARK 500 PRO A 122 170.29 -55.28 REMARK 500 ARG A 132 -149.26 -107.08 REMARK 500 ASN A 233 85.48 -160.42 REMARK 500 PHE A 262 41.83 32.34 REMARK 500 THR A 304 -43.28 -131.60 REMARK 500 PHE A 352 50.25 -91.50 REMARK 500 ASP A 422 87.14 -152.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1191 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A1192 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A1193 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A1194 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH A1195 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A1196 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH A1197 DISTANCE = 6.83 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SEP A 119 O1P REMARK 620 2 ASP A 259 OD2 94.4 REMARK 620 3 ASP A 261 OD1 146.2 92.5 REMARK 620 4 ASP A 261 OD2 116.6 144.0 51.5 REMARK 620 5 ASP A 263 OD1 114.3 97.1 97.6 87.0 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5BMN RELATED DB: PDB REMARK 900 APO FORM REMARK 900 RELATED ID: 5BMR RELATED DB: PDB DBREF 5BMP A 23 470 UNP Q8PGN7 Q8PGN7_XANAC 3 450 SEQADV 5BMP MET A 3 UNP Q8PGN7 INITIATING METHIONINE SEQADV 5BMP GLY A 4 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP SER A 5 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP SER A 6 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP HIS A 7 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP HIS A 8 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP HIS A 9 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP HIS A 10 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP HIS A 11 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP HIS A 12 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP SER A 13 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP SER A 14 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP GLY A 15 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP LEU A 16 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP VAL A 17 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP PRO A 18 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP ARG A 19 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP GLY A 20 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP SER A 21 UNP Q8PGN7 EXPRESSION TAG SEQADV 5BMP HIS A 22 UNP Q8PGN7 EXPRESSION TAG SEQRES 1 A 468 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 468 LEU VAL PRO ARG GLY SER HIS MET THR LEU PRO ALA PHE SEQRES 3 A 468 LYS ALA TYR ASP ILE ARG GLY ARG VAL PRO ASP GLU LEU SEQRES 4 A 468 ASN GLU ASP LEU ALA ARG ARG ILE GLY VAL ALA LEU ALA SEQRES 5 A 468 ALA GLN LEU ASP GLN GLY PRO VAL VAL LEU GLY HIS ASP SEQRES 6 A 468 VAL ARG LEU ALA SER PRO ALA LEU GLN GLU ALA LEU SER SEQRES 7 A 468 ALA GLY LEU ARG ALA SER GLY ARG ASP VAL ILE ASP ILE SEQRES 8 A 468 GLY LEU CYS GLY THR GLU GLU VAL TYR PHE GLN THR ASP SEQRES 9 A 468 TYR LEU LYS ALA ALA GLY GLY VAL MET VAL THR ALA SEP SEQRES 10 A 468 HIS ASN PRO MET ASP TYR ASN GLY MET LYS LEU VAL ARG SEQRES 11 A 468 GLU GLN ALA ARG PRO ILE SER SER ASP THR GLY LEU PHE SEQRES 12 A 468 ALA ILE ARG ASP THR VAL ALA ALA ASP THR ALA ALA PRO SEQRES 13 A 468 GLY GLU PRO THR ALA SER GLU GLN SER ARG THR ASP LYS SEQRES 14 A 468 THR ALA TYR LEU GLU HIS LEU LEU SER TYR VAL ASP ARG SEQRES 15 A 468 SER THR LEU LYS PRO LEU LYS LEU VAL VAL ASN ALA GLY SEQRES 16 A 468 ASN GLY GLY ALA GLY LEU ILE VAL ASP LEU LEU ALA PRO SEQRES 17 A 468 HIS LEU PRO PHE GLU PHE VAL ARG VAL PHE HIS GLU PRO SEQRES 18 A 468 ASP GLY ASN PHE PRO ASN GLY ILE PRO ASN PRO LEU LEU SEQRES 19 A 468 PRO GLU ASN ARG ASP ALA THR ALA LYS ALA VAL LYS ASP SEQRES 20 A 468 ASN GLY ALA ASP PHE GLY ILE ALA TRP ASP GLY ASP PHE SEQRES 21 A 468 ASP ARG CYS PHE PHE PHE ASP HIS THR GLY ARG PHE ILE SEQRES 22 A 468 GLU GLY TYR TYR LEU VAL GLY LEU LEU ALA GLN ALA ILE SEQRES 23 A 468 LEU ALA LYS GLN PRO GLY GLY LYS VAL VAL HIS ASP PRO SEQRES 24 A 468 ARG LEU THR TRP ASN THR VAL GLU GLN VAL GLU GLU ALA SEQRES 25 A 468 GLY GLY ILE PRO VAL LEU CYS LYS SER GLY HIS ALA PHE SEQRES 26 A 468 ILE LYS GLU LYS MET ARG SER GLU ASN ALA VAL TYR GLY SEQRES 27 A 468 GLY GLU MET SER ALA HIS HIS TYR PHE ARG GLU PHE ALA SEQRES 28 A 468 TYR ALA ASP SER GLY MET ILE PRO TRP LEU LEU ILE ALA SEQRES 29 A 468 GLU LEU VAL SER GLN SER GLY ARG SER LEU ALA ASP LEU SEQRES 30 A 468 VAL GLU ALA ARG MET GLN LYS PHE PRO CYS SER GLY GLU SEQRES 31 A 468 ILE ASN PHE LYS VAL ALA ASP ALA LYS ALA SER VAL ALA SEQRES 32 A 468 ARG VAL MET GLU HIS TYR ALA SER LEU SER PRO GLU LEU SEQRES 33 A 468 ASP TYR THR ASP GLY ILE SER ALA ASP PHE GLY GLN TRP SEQRES 34 A 468 ARG PHE ASN LEU ARG SER SER ASN THR GLU PRO LEU LEU SEQRES 35 A 468 ARG LEU ASN VAL GLU THR ARG GLY ASP ALA ALA LEU LEU SEQRES 36 A 468 GLU THR ARG THR GLN GLU ILE SER ASN LEU LEU ARG GLY MODRES 5BMP SEP A 119 SER MODIFIED RESIDUE HET SEP A 119 10 HET G1P A 501 16 HET MG A 502 1 HETNAM SEP PHOSPHOSERINE HETNAM G1P 1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE HETNAM MG MAGNESIUM ION HETSYN SEP PHOSPHONOSERINE HETSYN G1P ALPHA-D-GLUCOSE-1-PHOSPHATE; 1-O-PHOSPHONO-ALPHA-D- HETSYN 2 G1P GLUCOSE; 1-O-PHOSPHONO-D-GLUCOSE; 1-O-PHOSPHONO- HETSYN 3 G1P GLUCOSE FORMUL 1 SEP C3 H8 N O6 P FORMUL 2 G1P C6 H13 O9 P FORMUL 3 MG MG 2+ FORMUL 4 HOH *597(H2 O) HELIX 1 AA1 ASN A 42 ALA A 55 1 14 HELIX 2 AA2 ALA A 71 SER A 86 1 16 HELIX 3 AA3 GLY A 97 LEU A 108 1 12 HELIX 4 AA4 ARG A 132 ARG A 136 5 5 HELIX 5 AA5 GLY A 143 ASP A 154 1 12 HELIX 6 AA6 LYS A 171 SER A 180 1 10 HELIX 7 AA7 TYR A 181 VAL A 182 5 2 HELIX 8 AA8 ASP A 183 LEU A 187 5 5 HELIX 9 AA9 GLY A 200 ALA A 209 1 10 HELIX 10 AB1 PRO A 210 LEU A 212 5 3 HELIX 11 AB2 LEU A 236 GLY A 251 1 16 HELIX 12 AB3 GLU A 276 GLN A 292 1 17 HELIX 13 AB4 THR A 304 ALA A 314 1 11 HELIX 14 AB5 GLY A 324 ASN A 336 1 13 HELIX 15 AB6 MET A 359 GLY A 373 1 15 HELIX 16 AB7 SER A 375 PHE A 387 1 13 HELIX 17 AB8 ASP A 399 ALA A 412 1 14 HELIX 18 AB9 SER A 413 SER A 415 5 3 HELIX 19 AC1 ASP A 453 GLY A 470 1 18 SHEET 1 AA1 6 ILE A 33 ARG A 36 0 SHEET 2 AA1 6 TYR A 125 VAL A 131 -1 O MET A 128 N ILE A 33 SHEET 3 AA1 6 GLY A 112 VAL A 116 -1 N GLY A 113 O VAL A 131 SHEET 4 AA1 6 VAL A 62 HIS A 66 1 N GLY A 65 O VAL A 116 SHEET 5 AA1 6 VAL A 90 LEU A 95 1 O ILE A 91 N LEU A 64 SHEET 6 AA1 6 GLU A 165 SER A 167 1 O GLN A 166 N VAL A 90 SHEET 1 AA2 4 GLU A 215 VAL A 219 0 SHEET 2 AA2 4 LYS A 191 ASN A 195 1 N VAL A 194 O VAL A 219 SHEET 3 AA2 4 PHE A 254 TRP A 258 1 O ILE A 256 N VAL A 193 SHEET 4 AA2 4 CYS A 265 PHE A 268 -1 O PHE A 268 N GLY A 255 SHEET 1 AA3 4 ILE A 317 LEU A 320 0 SHEET 2 AA3 4 LYS A 296 HIS A 299 1 N VAL A 297 O VAL A 319 SHEET 3 AA3 4 TYR A 339 GLU A 342 1 O TYR A 339 N VAL A 298 SHEET 4 AA3 4 HIS A 346 PHE A 349 -1 O TYR A 348 N GLY A 340 SHEET 1 AA4 5 ILE A 393 PHE A 395 0 SHEET 2 AA4 5 LEU A 444 THR A 450 -1 O LEU A 446 N ILE A 393 SHEET 3 AA4 5 TRP A 431 SER A 437 -1 N ARG A 436 O ARG A 445 SHEET 4 AA4 5 ILE A 424 ASP A 427 -1 N ALA A 426 O PHE A 433 SHEET 5 AA4 5 GLU A 417 ASP A 419 -1 N GLU A 417 O ASP A 427 LINK C ALA A 118 N SEP A 119 1555 1555 1.33 LINK C SEP A 119 N HIS A 120 1555 1555 1.33 LINK O1P SEP A 119 MG MG A 502 1555 1555 1.89 LINK OD2 ASP A 259 MG MG A 502 1555 1555 2.10 LINK OD1 ASP A 261 MG MG A 502 1555 1555 2.12 LINK OD2 ASP A 261 MG MG A 502 1555 1555 2.75 LINK OD1 ASP A 263 MG MG A 502 1555 1555 2.13 CISPEP 1 VAL A 37 PRO A 38 0 6.42 CRYST1 43.861 54.732 173.143 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022799 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018271 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005776 0.00000