HEADER LIGASE 28-MAY-15 5BPH TITLE CRYSTAL STRUCTURE OF AMP COMPLEXED D-ALANINE-D-ALANINE LIGASE(DDL) TITLE 2 FROM YERSINIA PESTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-ALANINE--D-ALANINE LIGASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: D-ALA-D-ALA LIGASE,D-ALANYLALANINE SYNTHETASE; COMPND 5 EC: 6.3.2.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 632; SOURCE 4 GENE: DDL, DDLB, YPO0557, Y3624, YP_3627; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS D-ALANINE-D-ALANINE LIGASE (DDL), DRUG TARGET; BACTERIAL CELL WALL KEYWDS 2 SYNTHESIS, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR H.T.TRAN,L.W.KANG,M.K.HONG REVDAT 2 20-MAR-24 5BPH 1 REMARK LINK REVDAT 1 02-MAR-16 5BPH 0 JRNL AUTH H.T.TRAN,M.K.HONG,H.P.NGO,K.H.HUYNH,Y.J.AHN,Z.WANG,L.W.KANG JRNL TITL STRUCTURE OF D-ALANINE-D-ALANINE LIGASE FROM YERSINIA JRNL TITL 2 PESTIS: NUCLEOTIDE PHOSPHATE RECOGNITION BY THE SERINE LOOP. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 72 12 2016 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 26894530 JRNL DOI 10.1107/S2059798315021671 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 145553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7688 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10221 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 522 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9296 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 163 REMARK 3 SOLVENT ATOMS : 730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.096 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.019 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9654 ; 0.022 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 9205 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13067 ; 2.179 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 21233 ; 0.942 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1214 ; 6.285 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 391 ;35.586 ;25.013 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1598 ;13.411 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;16.416 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1491 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10822 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2046 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4880 ; 2.816 ; 2.745 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4877 ; 2.814 ; 2.745 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6082 ; 3.713 ; 4.106 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 6083 ; 3.713 ; 4.106 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4774 ; 4.289 ; 3.271 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4775 ; 4.288 ; 3.271 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6986 ; 6.252 ; 4.724 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 11265 ; 7.744 ;23.649 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 11216 ; 7.744 ;23.594 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5BPH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210321. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.997 REMARK 200 MONOCHROMATOR : DCM SI (111) CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.80 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 50.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: ORTHORHOMBIC SHAPED CRYSTAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM ACETATE, 0.1 M BIS-TRIS REMARK 280 PH 7.0, 29% PEG 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.29250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.38450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.03550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 105.38450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.29250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.03550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 GLY D 149 REMARK 465 TYR D 216 REMARK 465 LEU D 217 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N MET A 1 O HOH A 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 105 CD GLN A 105 NE2 0.158 REMARK 500 GLY B 185 N GLY B 185 CA 0.135 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 69 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 MET A 89 CG - SD - CE ANGL. DEV. = -30.2 DEGREES REMARK 500 GLN A 105 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 ASP A 261 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 GLY B 185 N - CA - C ANGL. DEV. = -17.8 DEGREES REMARK 500 ARG B 255 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 MET B 259 CA - CB - CG ANGL. DEV. = 18.3 DEGREES REMARK 500 ARG C 16 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASP C 96 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 MET D 89 CG - SD - CE ANGL. DEV. = -31.1 DEGREES REMARK 500 ARG D 255 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP D 261 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG D 300 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG D 300 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 MET D 303 CG - SD - CE ANGL. DEV. = -28.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 249 30.91 70.03 REMARK 500 GLU B 148 123.20 -178.27 REMARK 500 SER B 150 -130.78 -131.05 REMARK 500 VAL B 208 -54.52 66.71 REMARK 500 ASP B 211 -169.15 -125.34 REMARK 500 SER D 151 -139.04 -64.86 REMARK 500 TYR D 212 -50.05 149.44 REMARK 500 LEU D 269 -60.35 -102.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 184 GLY B 185 -145.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 68 O REMARK 620 2 SER A 91 O 79.4 REMARK 620 3 THR A 94 OG1 151.4 73.1 REMARK 620 4 THR A 273 OG1 85.1 118.5 100.8 REMARK 620 5 HOH A 575 O 113.3 155.4 95.2 84.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 68 O REMARK 620 2 SER B 91 O 79.3 REMARK 620 3 THR B 94 OG1 152.1 75.2 REMARK 620 4 THR B 273 OG1 82.0 114.8 98.5 REMARK 620 5 HOH B 566 O 110.6 158.1 97.2 86.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 68 O REMARK 620 2 SER C 91 O 80.1 REMARK 620 3 THR C 94 OG1 153.3 74.9 REMARK 620 4 THR C 273 OG1 85.3 117.3 97.9 REMARK 620 5 HOH C 551 O 111.4 157.8 95.2 83.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 68 O REMARK 620 2 SER D 91 O 80.3 REMARK 620 3 THR D 94 OG1 152.2 74.4 REMARK 620 4 THR D 273 OG1 83.9 118.5 98.1 REMARK 620 5 HOH D 558 O 113.7 156.4 94.1 83.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT D 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT D 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5BPF RELATED DB: PDB DBREF 5BPH A 1 306 UNP Q8ZIE7 DDL_YERPE 1 306 DBREF 5BPH B 1 306 UNP Q8ZIE7 DDL_YERPE 1 306 DBREF 5BPH C 1 306 UNP Q8ZIE7 DDL_YERPE 1 306 DBREF 5BPH D 1 306 UNP Q8ZIE7 DDL_YERPE 1 306 SEQRES 1 A 306 MET ALA GLU LYS VAL ALA VAL LEU LEU GLY GLY THR SER SEQRES 2 A 306 ALA GLU ARG GLU VAL SER LEU LEU SER GLY GLN ALA VAL SEQRES 3 A 306 LEU ALA GLY LEU LYS GLU ALA GLY ILE ASP ALA TYR GLY SEQRES 4 A 306 VAL ASP THR LYS ASP PHE PRO VAL THR GLN LEU LYS GLU SEQRES 5 A 306 GLN GLY PHE ASP LYS VAL PHE ILE ALA LEU HIS GLY ARG SEQRES 6 A 306 GLY GLY GLU ASP GLY THR LEU GLN GLY VAL LEU GLU PHE SEQRES 7 A 306 LEU GLN LEU PRO TYR THR GLY SER GLY VAL MET ALA SER SEQRES 8 A 306 ALA LEU THR MET ASP LYS LEU ARG THR LYS LEU VAL TRP SEQRES 9 A 306 GLN ALA LEU GLY LEU PRO ILE SER PRO TYR VAL ALA LEU SEQRES 10 A 306 ASN ARG GLN GLN PHE GLU THR LEU SER PRO GLU GLU LEU SEQRES 11 A 306 VAL ALA CYS VAL ALA LYS LEU GLY LEU PRO LEU ILE VAL SEQRES 12 A 306 LYS PRO SER HIS GLU GLY SER SER VAL GLY MET SER LYS SEQRES 13 A 306 VAL ASP HIS ALA SER GLU LEU GLN LYS ALA LEU VAL GLU SEQRES 14 A 306 ALA PHE GLN HIS ASP SER ASP VAL LEU ILE GLU LYS TRP SEQRES 15 A 306 LEU SER GLY PRO GLU PHE THR VAL ALA ILE LEU GLY ASP SEQRES 16 A 306 GLU VAL LEU PRO SER ILE ARG ILE GLN PRO PRO GLY VAL SEQRES 17 A 306 PHE TYR ASP TYR ASP ALA LYS TYR LEU SER ASP LYS THR SEQRES 18 A 306 GLN TYR PHE CYS PRO SER GLY LEU SER ASP GLU SER GLU SEQRES 19 A 306 GLN GLN LEU ALA ALA LEU ALA LEU GLN ALA TYR HIS ALA SEQRES 20 A 306 LEU ASP CYS SER GLY TRP GLY ARG VAL ASP VAL MET GLN SEQRES 21 A 306 ASP ARG ASP GLY HIS PHE TYR LEU LEU GLU VAL ASN THR SEQRES 22 A 306 SER PRO GLY MET THR SER HIS SER LEU VAL PRO MET ALA SEQRES 23 A 306 ALA ARG GLN TYR GLY LEU SER PHE SER GLN LEU VAL ALA SEQRES 24 A 306 ARG ILE LEU MET LEU ALA ASP SEQRES 1 B 306 MET ALA GLU LYS VAL ALA VAL LEU LEU GLY GLY THR SER SEQRES 2 B 306 ALA GLU ARG GLU VAL SER LEU LEU SER GLY GLN ALA VAL SEQRES 3 B 306 LEU ALA GLY LEU LYS GLU ALA GLY ILE ASP ALA TYR GLY SEQRES 4 B 306 VAL ASP THR LYS ASP PHE PRO VAL THR GLN LEU LYS GLU SEQRES 5 B 306 GLN GLY PHE ASP LYS VAL PHE ILE ALA LEU HIS GLY ARG SEQRES 6 B 306 GLY GLY GLU ASP GLY THR LEU GLN GLY VAL LEU GLU PHE SEQRES 7 B 306 LEU GLN LEU PRO TYR THR GLY SER GLY VAL MET ALA SER SEQRES 8 B 306 ALA LEU THR MET ASP LYS LEU ARG THR LYS LEU VAL TRP SEQRES 9 B 306 GLN ALA LEU GLY LEU PRO ILE SER PRO TYR VAL ALA LEU SEQRES 10 B 306 ASN ARG GLN GLN PHE GLU THR LEU SER PRO GLU GLU LEU SEQRES 11 B 306 VAL ALA CYS VAL ALA LYS LEU GLY LEU PRO LEU ILE VAL SEQRES 12 B 306 LYS PRO SER HIS GLU GLY SER SER VAL GLY MET SER LYS SEQRES 13 B 306 VAL ASP HIS ALA SER GLU LEU GLN LYS ALA LEU VAL GLU SEQRES 14 B 306 ALA PHE GLN HIS ASP SER ASP VAL LEU ILE GLU LYS TRP SEQRES 15 B 306 LEU SER GLY PRO GLU PHE THR VAL ALA ILE LEU GLY ASP SEQRES 16 B 306 GLU VAL LEU PRO SER ILE ARG ILE GLN PRO PRO GLY VAL SEQRES 17 B 306 PHE TYR ASP TYR ASP ALA LYS TYR LEU SER ASP LYS THR SEQRES 18 B 306 GLN TYR PHE CYS PRO SER GLY LEU SER ASP GLU SER GLU SEQRES 19 B 306 GLN GLN LEU ALA ALA LEU ALA LEU GLN ALA TYR HIS ALA SEQRES 20 B 306 LEU ASP CYS SER GLY TRP GLY ARG VAL ASP VAL MET GLN SEQRES 21 B 306 ASP ARG ASP GLY HIS PHE TYR LEU LEU GLU VAL ASN THR SEQRES 22 B 306 SER PRO GLY MET THR SER HIS SER LEU VAL PRO MET ALA SEQRES 23 B 306 ALA ARG GLN TYR GLY LEU SER PHE SER GLN LEU VAL ALA SEQRES 24 B 306 ARG ILE LEU MET LEU ALA ASP SEQRES 1 C 306 MET ALA GLU LYS VAL ALA VAL LEU LEU GLY GLY THR SER SEQRES 2 C 306 ALA GLU ARG GLU VAL SER LEU LEU SER GLY GLN ALA VAL SEQRES 3 C 306 LEU ALA GLY LEU LYS GLU ALA GLY ILE ASP ALA TYR GLY SEQRES 4 C 306 VAL ASP THR LYS ASP PHE PRO VAL THR GLN LEU LYS GLU SEQRES 5 C 306 GLN GLY PHE ASP LYS VAL PHE ILE ALA LEU HIS GLY ARG SEQRES 6 C 306 GLY GLY GLU ASP GLY THR LEU GLN GLY VAL LEU GLU PHE SEQRES 7 C 306 LEU GLN LEU PRO TYR THR GLY SER GLY VAL MET ALA SER SEQRES 8 C 306 ALA LEU THR MET ASP LYS LEU ARG THR LYS LEU VAL TRP SEQRES 9 C 306 GLN ALA LEU GLY LEU PRO ILE SER PRO TYR VAL ALA LEU SEQRES 10 C 306 ASN ARG GLN GLN PHE GLU THR LEU SER PRO GLU GLU LEU SEQRES 11 C 306 VAL ALA CYS VAL ALA LYS LEU GLY LEU PRO LEU ILE VAL SEQRES 12 C 306 LYS PRO SER HIS GLU GLY SER SER VAL GLY MET SER LYS SEQRES 13 C 306 VAL ASP HIS ALA SER GLU LEU GLN LYS ALA LEU VAL GLU SEQRES 14 C 306 ALA PHE GLN HIS ASP SER ASP VAL LEU ILE GLU LYS TRP SEQRES 15 C 306 LEU SER GLY PRO GLU PHE THR VAL ALA ILE LEU GLY ASP SEQRES 16 C 306 GLU VAL LEU PRO SER ILE ARG ILE GLN PRO PRO GLY VAL SEQRES 17 C 306 PHE TYR ASP TYR ASP ALA LYS TYR LEU SER ASP LYS THR SEQRES 18 C 306 GLN TYR PHE CYS PRO SER GLY LEU SER ASP GLU SER GLU SEQRES 19 C 306 GLN GLN LEU ALA ALA LEU ALA LEU GLN ALA TYR HIS ALA SEQRES 20 C 306 LEU ASP CYS SER GLY TRP GLY ARG VAL ASP VAL MET GLN SEQRES 21 C 306 ASP ARG ASP GLY HIS PHE TYR LEU LEU GLU VAL ASN THR SEQRES 22 C 306 SER PRO GLY MET THR SER HIS SER LEU VAL PRO MET ALA SEQRES 23 C 306 ALA ARG GLN TYR GLY LEU SER PHE SER GLN LEU VAL ALA SEQRES 24 C 306 ARG ILE LEU MET LEU ALA ASP SEQRES 1 D 306 MET ALA GLU LYS VAL ALA VAL LEU LEU GLY GLY THR SER SEQRES 2 D 306 ALA GLU ARG GLU VAL SER LEU LEU SER GLY GLN ALA VAL SEQRES 3 D 306 LEU ALA GLY LEU LYS GLU ALA GLY ILE ASP ALA TYR GLY SEQRES 4 D 306 VAL ASP THR LYS ASP PHE PRO VAL THR GLN LEU LYS GLU SEQRES 5 D 306 GLN GLY PHE ASP LYS VAL PHE ILE ALA LEU HIS GLY ARG SEQRES 6 D 306 GLY GLY GLU ASP GLY THR LEU GLN GLY VAL LEU GLU PHE SEQRES 7 D 306 LEU GLN LEU PRO TYR THR GLY SER GLY VAL MET ALA SER SEQRES 8 D 306 ALA LEU THR MET ASP LYS LEU ARG THR LYS LEU VAL TRP SEQRES 9 D 306 GLN ALA LEU GLY LEU PRO ILE SER PRO TYR VAL ALA LEU SEQRES 10 D 306 ASN ARG GLN GLN PHE GLU THR LEU SER PRO GLU GLU LEU SEQRES 11 D 306 VAL ALA CYS VAL ALA LYS LEU GLY LEU PRO LEU ILE VAL SEQRES 12 D 306 LYS PRO SER HIS GLU GLY SER SER VAL GLY MET SER LYS SEQRES 13 D 306 VAL ASP HIS ALA SER GLU LEU GLN LYS ALA LEU VAL GLU SEQRES 14 D 306 ALA PHE GLN HIS ASP SER ASP VAL LEU ILE GLU LYS TRP SEQRES 15 D 306 LEU SER GLY PRO GLU PHE THR VAL ALA ILE LEU GLY ASP SEQRES 16 D 306 GLU VAL LEU PRO SER ILE ARG ILE GLN PRO PRO GLY VAL SEQRES 17 D 306 PHE TYR ASP TYR ASP ALA LYS TYR LEU SER ASP LYS THR SEQRES 18 D 306 GLN TYR PHE CYS PRO SER GLY LEU SER ASP GLU SER GLU SEQRES 19 D 306 GLN GLN LEU ALA ALA LEU ALA LEU GLN ALA TYR HIS ALA SEQRES 20 D 306 LEU ASP CYS SER GLY TRP GLY ARG VAL ASP VAL MET GLN SEQRES 21 D 306 ASP ARG ASP GLY HIS PHE TYR LEU LEU GLU VAL ASN THR SEQRES 22 D 306 SER PRO GLY MET THR SER HIS SER LEU VAL PRO MET ALA SEQRES 23 D 306 ALA ARG GLN TYR GLY LEU SER PHE SER GLN LEU VAL ALA SEQRES 24 D 306 ARG ILE LEU MET LEU ALA ASP HET AMP A 401 23 HET NA A 402 1 HET ACT A 403 4 HET GOL A 404 6 HET GOL A 405 6 HET NA A 406 1 HET AMP B 401 23 HET NA B 402 1 HET ACT B 403 4 HET ACT B 404 4 HET GOL B 405 6 HET AMP C 401 23 HET NA C 402 1 HET ACT C 403 4 HET GOL C 404 6 HET GOL C 405 6 HET AMP D 401 23 HET NA D 402 1 HET ACT D 403 4 HET GOL D 404 6 HET GOL D 405 6 HET ACT D 406 4 HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM NA SODIUM ION HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 AMP 4(C10 H14 N5 O7 P) FORMUL 6 NA 5(NA 1+) FORMUL 7 ACT 6(C2 H3 O2 1-) FORMUL 8 GOL 7(C3 H8 O3) FORMUL 27 HOH *730(H2 O) HELIX 1 AA1 GLU A 15 ALA A 33 1 19 HELIX 2 AA2 PRO A 46 LEU A 50 5 5 HELIX 3 AA3 GLY A 70 GLN A 80 1 11 HELIX 4 AA4 GLY A 87 THR A 94 1 8 HELIX 5 AA5 ASP A 96 LEU A 107 1 12 HELIX 6 AA6 ARG A 119 LEU A 125 1 7 HELIX 7 AA7 SER A 126 ALA A 135 1 10 HELIX 8 AA8 LYS A 136 GLY A 138 5 3 HELIX 9 AA9 HIS A 159 SER A 161 5 3 HELIX 10 AB1 GLU A 162 GLN A 172 1 11 HELIX 11 AB2 ASP A 211 LEU A 217 1 7 HELIX 12 AB3 SER A 230 LEU A 248 1 19 HELIX 13 AB4 SER A 281 GLY A 291 1 11 HELIX 14 AB5 SER A 293 LEU A 304 1 12 HELIX 15 AB6 GLU B 15 ALA B 33 1 19 HELIX 16 AB7 PRO B 46 LEU B 50 5 5 HELIX 17 AB8 GLY B 70 GLN B 80 1 11 HELIX 18 AB9 GLY B 87 THR B 94 1 8 HELIX 19 AC1 ASP B 96 LEU B 107 1 12 HELIX 20 AC2 ARG B 119 LEU B 125 1 7 HELIX 21 AC3 SER B 126 ALA B 135 1 10 HELIX 22 AC4 LYS B 136 GLY B 138 5 3 HELIX 23 AC5 HIS B 159 SER B 161 5 3 HELIX 24 AC6 GLU B 162 GLN B 172 1 11 HELIX 25 AC7 ASP B 211 LEU B 217 1 7 HELIX 26 AC8 SER B 230 LEU B 248 1 19 HELIX 27 AC9 SER B 281 TYR B 290 1 10 HELIX 28 AD1 SER B 293 LEU B 304 1 12 HELIX 29 AD2 GLU C 15 ALA C 33 1 19 HELIX 30 AD3 PRO C 46 LEU C 50 5 5 HELIX 31 AD4 GLY C 70 GLN C 80 1 11 HELIX 32 AD5 GLY C 87 THR C 94 1 8 HELIX 33 AD6 ASP C 96 LEU C 107 1 12 HELIX 34 AD7 ARG C 119 LEU C 125 1 7 HELIX 35 AD8 SER C 126 ALA C 135 1 10 HELIX 36 AD9 LYS C 136 GLY C 138 5 3 HELIX 37 AE1 HIS C 159 SER C 161 5 3 HELIX 38 AE2 GLU C 162 GLN C 172 1 11 HELIX 39 AE3 ASP C 211 LEU C 217 1 7 HELIX 40 AE4 SER C 230 LEU C 248 1 19 HELIX 41 AE5 SER C 281 GLY C 291 1 11 HELIX 42 AE6 SER C 293 LEU C 304 1 12 HELIX 43 AE7 GLU D 15 ALA D 33 1 19 HELIX 44 AE8 PRO D 46 LEU D 50 5 5 HELIX 45 AE9 GLY D 70 GLN D 80 1 11 HELIX 46 AF1 GLY D 87 THR D 94 1 8 HELIX 47 AF2 ASP D 96 LEU D 107 1 12 HELIX 48 AF3 ARG D 119 LEU D 125 1 7 HELIX 49 AF4 SER D 126 VAL D 134 1 9 HELIX 50 AF5 ALA D 135 GLY D 138 5 4 HELIX 51 AF6 HIS D 159 SER D 161 5 3 HELIX 52 AF7 GLU D 162 GLN D 172 1 11 HELIX 53 AF8 SER D 230 LEU D 248 1 19 HELIX 54 AF9 SER D 281 GLY D 291 1 11 HELIX 55 AG1 SER D 293 LEU D 304 1 12 SHEET 1 AA1 3 ASP A 36 ASP A 41 0 SHEET 2 AA1 3 LYS A 4 LEU A 9 1 N VAL A 7 O VAL A 40 SHEET 3 AA1 3 LYS A 57 ILE A 60 1 O PHE A 59 N ALA A 6 SHEET 1 AA2 4 TYR A 114 ASN A 118 0 SHEET 2 AA2 4 ASP A 176 LYS A 181 -1 O ILE A 179 N VAL A 115 SHEET 3 AA2 4 LEU A 141 PRO A 145 -1 N ILE A 142 O GLU A 180 SHEET 4 AA2 4 SER A 155 VAL A 157 -1 O VAL A 157 N LEU A 141 SHEET 1 AA3 4 GLU A 196 VAL A 197 0 SHEET 2 AA3 4 GLU A 187 LEU A 193 -1 N LEU A 193 O GLU A 196 SHEET 3 AA3 4 ILE A 201 GLN A 204 -1 O ILE A 203 N GLU A 187 SHEET 4 AA3 4 GLN A 222 PHE A 224 -1 O GLN A 222 N GLN A 204 SHEET 1 AA4 4 GLU A 196 VAL A 197 0 SHEET 2 AA4 4 GLU A 187 LEU A 193 -1 N LEU A 193 O GLU A 196 SHEET 3 AA4 4 TRP A 253 GLN A 260 -1 O VAL A 258 N PHE A 188 SHEET 4 AA4 4 PHE A 266 ASN A 272 -1 O LEU A 269 N ASP A 257 SHEET 1 AA5 3 ALA B 37 ASP B 41 0 SHEET 2 AA5 3 VAL B 5 LEU B 9 1 N VAL B 7 O TYR B 38 SHEET 3 AA5 3 LYS B 57 ILE B 60 1 O PHE B 59 N ALA B 6 SHEET 1 AA6 4 TYR B 114 ASN B 118 0 SHEET 2 AA6 4 ASP B 176 LYS B 181 -1 O VAL B 177 N LEU B 117 SHEET 3 AA6 4 LEU B 141 PRO B 145 -1 N ILE B 142 O GLU B 180 SHEET 4 AA6 4 SER B 155 VAL B 157 -1 O VAL B 157 N LEU B 141 SHEET 1 AA7 4 GLU B 196 VAL B 197 0 SHEET 2 AA7 4 GLU B 187 LEU B 193 -1 N LEU B 193 O GLU B 196 SHEET 3 AA7 4 ILE B 201 GLN B 204 -1 O ILE B 203 N GLU B 187 SHEET 4 AA7 4 GLN B 222 PHE B 224 -1 O GLN B 222 N GLN B 204 SHEET 1 AA8 4 GLU B 196 VAL B 197 0 SHEET 2 AA8 4 GLU B 187 LEU B 193 -1 N LEU B 193 O GLU B 196 SHEET 3 AA8 4 TRP B 253 GLN B 260 -1 O VAL B 258 N PHE B 188 SHEET 4 AA8 4 PHE B 266 ASN B 272 -1 O ASN B 272 N ARG B 255 SHEET 1 AA9 3 ASP C 36 ASP C 41 0 SHEET 2 AA9 3 LYS C 4 LEU C 9 1 N VAL C 7 O TYR C 38 SHEET 3 AA9 3 LYS C 57 ILE C 60 1 O PHE C 59 N ALA C 6 SHEET 1 AB1 4 TYR C 114 ASN C 118 0 SHEET 2 AB1 4 ASP C 176 LYS C 181 -1 O VAL C 177 N LEU C 117 SHEET 3 AB1 4 LEU C 141 PRO C 145 -1 N LYS C 144 O LEU C 178 SHEET 4 AB1 4 SER C 155 VAL C 157 -1 O VAL C 157 N LEU C 141 SHEET 1 AB2 4 GLU C 196 VAL C 197 0 SHEET 2 AB2 4 GLU C 187 LEU C 193 -1 N LEU C 193 O GLU C 196 SHEET 3 AB2 4 ILE C 201 GLN C 204 -1 O ILE C 203 N GLU C 187 SHEET 4 AB2 4 GLN C 222 PHE C 224 -1 O GLN C 222 N GLN C 204 SHEET 1 AB3 4 GLU C 196 VAL C 197 0 SHEET 2 AB3 4 GLU C 187 LEU C 193 -1 N LEU C 193 O GLU C 196 SHEET 3 AB3 4 TRP C 253 GLN C 260 -1 O VAL C 258 N PHE C 188 SHEET 4 AB3 4 PHE C 266 ASN C 272 -1 O ASN C 272 N ARG C 255 SHEET 1 AB4 3 ASP D 36 ASP D 41 0 SHEET 2 AB4 3 LYS D 4 LEU D 9 1 N VAL D 7 O TYR D 38 SHEET 3 AB4 3 LYS D 57 ILE D 60 1 O PHE D 59 N ALA D 6 SHEET 1 AB5 4 TYR D 114 ASN D 118 0 SHEET 2 AB5 4 ASP D 176 LYS D 181 -1 O ILE D 179 N VAL D 115 SHEET 3 AB5 4 LEU D 141 PRO D 145 -1 N LYS D 144 O LEU D 178 SHEET 4 AB5 4 SER D 155 VAL D 157 -1 O SER D 155 N VAL D 143 SHEET 1 AB6 4 GLU D 196 VAL D 197 0 SHEET 2 AB6 4 GLU D 187 LEU D 193 -1 N LEU D 193 O GLU D 196 SHEET 3 AB6 4 ILE D 201 GLN D 204 -1 O ILE D 203 N GLU D 187 SHEET 4 AB6 4 GLN D 222 PHE D 224 -1 O PHE D 224 N ARG D 202 SHEET 1 AB7 4 GLU D 196 VAL D 197 0 SHEET 2 AB7 4 GLU D 187 LEU D 193 -1 N LEU D 193 O GLU D 196 SHEET 3 AB7 4 TRP D 253 GLN D 260 -1 O VAL D 258 N PHE D 188 SHEET 4 AB7 4 PHE D 266 ASN D 272 -1 O ASN D 272 N ARG D 255 LINK O GLU A 68 NA NA A 402 1555 1555 2.33 LINK O SER A 91 NA NA A 402 1555 1555 2.45 LINK OG1 THR A 94 NA NA A 402 1555 1555 2.33 LINK OG1 THR A 273 NA NA A 402 1555 1555 2.32 LINK NA NA A 402 O HOH A 575 1555 1555 2.33 LINK NA NA A 406 O HOH B 687 1555 1555 3.10 LINK O GLU B 68 NA NA B 402 1555 1555 2.31 LINK O SER B 91 NA NA B 402 1555 1555 2.47 LINK OG1 THR B 94 NA NA B 402 1555 1555 2.28 LINK OG1 THR B 273 NA NA B 402 1555 1555 2.38 LINK NA NA B 402 O HOH B 566 1555 1555 2.34 LINK O GLU C 68 NA NA C 402 1555 1555 2.30 LINK O SER C 91 NA NA C 402 1555 1555 2.43 LINK OG1 THR C 94 NA NA C 402 1555 1555 2.31 LINK OG1 THR C 273 NA NA C 402 1555 1555 2.35 LINK NA NA C 402 O HOH C 551 1555 1555 2.32 LINK O GLU D 68 NA NA D 402 1555 1555 2.31 LINK O SER D 91 NA NA D 402 1555 1555 2.41 LINK OG1 THR D 94 NA NA D 402 1555 1555 2.35 LINK OG1 THR D 273 NA NA D 402 1555 1555 2.33 LINK NA NA D 402 O HOH D 558 1555 1555 2.35 CISPEP 1 LEU A 139 PRO A 140 0 -0.97 CISPEP 2 GLY A 185 PRO A 186 0 7.96 CISPEP 3 CYS A 225 PRO A 226 0 5.36 CISPEP 4 LEU B 139 PRO B 140 0 0.63 CISPEP 5 CYS B 225 PRO B 226 0 4.62 CISPEP 6 LEU C 139 PRO C 140 0 -7.69 CISPEP 7 GLY C 185 PRO C 186 0 14.03 CISPEP 8 CYS C 225 PRO C 226 0 3.97 CISPEP 9 LEU D 139 PRO D 140 0 1.90 CISPEP 10 GLY D 185 PRO D 186 0 10.26 CISPEP 11 CYS D 225 PRO D 226 0 5.22 SITE 1 AC1 16 LYS A 97 ILE A 142 LYS A 144 MET A 154 SITE 2 AC1 16 GLU A 180 LYS A 181 TRP A 182 LEU A 183 SITE 3 AC1 16 GLU A 187 PHE A 209 TYR A 210 MET A 259 SITE 4 AC1 16 GLU A 270 HOH A 524 HOH A 598 HOH A 601 SITE 1 AC2 6 GLU A 68 SER A 91 THR A 94 MET A 95 SITE 2 AC2 6 THR A 273 HOH A 575 SITE 1 AC3 6 GLY A 276 SER A 281 LEU A 282 HOH A 508 SITE 2 AC3 6 HOH A 560 HOH A 566 SITE 1 AC4 5 LEU A 76 GLU A 77 GLN A 80 LEU A 81 SITE 2 AC4 5 ASP A 306 SITE 1 AC5 6 LEU A 107 HIS A 246 ALA A 247 HOH A 502 SITE 2 AC5 6 ALA D 116 ASN D 118 SITE 1 AC6 2 HIS A 280 HIS B 265 SITE 1 AC7 19 LYS B 97 ILE B 142 LYS B 144 MET B 154 SITE 2 AC7 19 GLU B 180 LYS B 181 TRP B 182 LEU B 183 SITE 3 AC7 19 GLU B 187 VAL B 208 PHE B 209 TYR B 210 SITE 4 AC7 19 MET B 259 GLU B 270 HOH B 514 HOH B 516 SITE 5 AC7 19 HOH B 527 HOH B 531 HOH B 537 SITE 1 AC8 6 GLU B 68 SER B 91 THR B 94 MET B 95 SITE 2 AC8 6 THR B 273 HOH B 566 SITE 1 AC9 8 LYS B 215 TYR B 216 ARG B 255 ASN B 272 SITE 2 AC9 8 PRO B 275 GLY B 276 ACT B 404 HOH B 572 SITE 1 AD1 7 LYS B 215 TYR B 216 GLY B 276 SER B 281 SITE 2 AD1 7 LEU B 282 ACT B 403 HOH B 555 SITE 1 AD2 5 GLY B 11 THR B 12 THR B 42 GLY B 66 SITE 2 AD2 5 HOH B 618 SITE 1 AD3 15 LYS C 97 ILE C 142 LYS C 144 GLU C 180 SITE 2 AD3 15 LYS C 181 TRP C 182 LEU C 183 GLU C 187 SITE 3 AD3 15 PHE C 209 TYR C 210 MET C 259 GLU C 270 SITE 4 AD3 15 HOH C 503 HOH C 518 HOH C 542 SITE 1 AD4 6 GLU C 68 SER C 91 THR C 94 MET C 95 SITE 2 AD4 6 THR C 273 HOH C 551 SITE 1 AD5 7 TYR C 210 GLY C 276 SER C 281 LEU C 282 SITE 2 AD5 7 HOH C 501 HOH C 514 HOH C 533 SITE 1 AD6 7 PRO C 82 TYR C 83 GLY C 85 SER C 86 SITE 2 AD6 7 GLY C 87 SER C 251 ASP C 306 SITE 1 AD7 7 GLY C 11 THR C 12 THR C 42 ARG C 65 SITE 2 AD7 7 GLY C 66 HOH C 531 HOH C 534 SITE 1 AD8 16 LYS D 97 ILE D 142 LYS D 144 GLU D 180 SITE 2 AD8 16 LYS D 181 TRP D 182 LEU D 183 GLU D 187 SITE 3 AD8 16 PHE D 209 TYR D 210 MET D 259 LEU D 269 SITE 4 AD8 16 GLU D 270 HOH D 538 HOH D 576 HOH D 584 SITE 1 AD9 6 GLU D 68 SER D 91 THR D 94 MET D 95 SITE 2 AD9 6 THR D 273 HOH D 558 SITE 1 AE1 6 ARG D 255 GLY D 276 SER D 281 LEU D 282 SITE 2 AE1 6 ACT D 406 HOH D 548 SITE 1 AE2 8 PRO D 82 TYR D 83 GLY D 85 SER D 86 SITE 2 AE2 8 GLY D 87 SER D 251 ASP D 306 HOH D 506 SITE 1 AE3 6 LEU D 76 GLU D 77 GLN D 80 LEU D 81 SITE 2 AE3 6 ASP D 306 HOH D 516 SITE 1 AE4 6 LYS D 215 ARG D 255 ASN D 272 GLY D 276 SITE 2 AE4 6 ACT D 403 HOH D 518 CRYST1 62.585 106.071 210.769 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015978 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009428 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004745 0.00000