HEADER HYDROLASE 28-MAY-15 5BPM TITLE CRYSTAL STRUCTURE OF UNHYDROLYZED ATP BOUND HUMAN HSP70 NBD DOUBLE TITLE 2 MUTANT E268Q+R272K. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK 70 KDA PROTEIN 1A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HEAT SHOCK 70 KDA PROTEIN 1,HSP70.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HSPA1A, HSPA1, HSX70; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B+ KEYWDS HYDROLASE, ATP HYDROLYSIS ACTIVITY EXPDTA X-RAY DIFFRACTION AUTHOR D.NARAYANAN,R.A.ENGH REVDAT 2 10-JAN-24 5BPM 1 LINK REVDAT 1 14-SEP-16 5BPM 0 JRNL AUTH D.NARAYANAN,A.PFLUG,T.CHRISTOPEIT,P.KYOMUHENDO,R.A.ENGH JRNL TITL NUCLEOTIDE BINDING TO VARIANTS OF THE HSP70-NBD. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 38927 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0700 - 4.4018 0.98 2843 127 0.1476 0.1719 REMARK 3 2 4.4018 - 3.4941 0.99 2698 167 0.1404 0.1899 REMARK 3 3 3.4941 - 3.0525 0.99 2656 143 0.1708 0.2424 REMARK 3 4 3.0525 - 2.7735 0.99 2699 111 0.1743 0.2372 REMARK 3 5 2.7735 - 2.5747 1.00 2638 139 0.1702 0.2409 REMARK 3 6 2.5747 - 2.4229 1.00 2679 136 0.1666 0.2665 REMARK 3 7 2.4229 - 2.3016 1.00 2630 148 0.1713 0.2485 REMARK 3 8 2.3016 - 2.2014 0.99 2609 124 0.1734 0.2286 REMARK 3 9 2.2014 - 2.1166 0.99 2657 120 0.1762 0.2534 REMARK 3 10 2.1166 - 2.0436 0.99 2625 137 0.1845 0.2402 REMARK 3 11 2.0436 - 1.9797 1.00 2607 142 0.2064 0.2660 REMARK 3 12 1.9797 - 1.9231 0.99 2617 149 0.2191 0.2717 REMARK 3 13 1.9231 - 1.8725 0.99 2585 154 0.2411 0.2648 REMARK 3 14 1.8725 - 1.8268 0.93 2491 98 0.2529 0.2948 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 3041 REMARK 3 ANGLE : 1.279 4121 REMARK 3 CHIRALITY : 0.061 466 REMARK 3 PLANARITY : 0.007 537 REMARK 3 DIHEDRAL : 15.192 1133 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4298 -25.1818 22.9945 REMARK 3 T TENSOR REMARK 3 T11: 0.0702 T22: 0.0728 REMARK 3 T33: 0.0853 T12: -0.0015 REMARK 3 T13: -0.0000 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 0.2957 L22: 0.8001 REMARK 3 L33: 0.8422 L12: -0.0962 REMARK 3 L13: -0.0298 L23: -0.0113 REMARK 3 S TENSOR REMARK 3 S11: -0.0160 S12: -0.0229 S13: -0.0673 REMARK 3 S21: 0.0591 S22: 0.0140 S23: 0.0441 REMARK 3 S31: 0.0086 S32: -0.0047 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0222 0.5286 23.1047 REMARK 3 T TENSOR REMARK 3 T11: 0.1723 T22: 0.2409 REMARK 3 T33: 0.1708 T12: -0.0598 REMARK 3 T13: 0.0497 T23: -0.0726 REMARK 3 L TENSOR REMARK 3 L11: 0.3037 L22: 0.2982 REMARK 3 L33: 0.2139 L12: 0.0589 REMARK 3 L13: 0.2057 L23: 0.2021 REMARK 3 S TENSOR REMARK 3 S11: 0.2069 S12: -0.4447 S13: 0.1600 REMARK 3 S21: 0.0417 S22: -0.2180 S23: 0.0961 REMARK 3 S31: -0.0860 S32: -0.2475 S33: 0.0329 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 293 THROUGH 381 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8480 -17.7971 5.5164 REMARK 3 T TENSOR REMARK 3 T11: 0.0973 T22: 0.1034 REMARK 3 T33: 0.0944 T12: -0.0067 REMARK 3 T13: -0.0037 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.3841 L22: 0.3024 REMARK 3 L33: 0.2312 L12: -0.0635 REMARK 3 L13: -0.2008 L23: 0.1300 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: 0.0595 S13: -0.0499 REMARK 3 S21: -0.0051 S22: 0.0224 S23: -0.0585 REMARK 3 S31: -0.0519 S32: -0.0288 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BPM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000210220. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 - 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38938 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 48.076 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.13800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 1.07600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.0 REMARK 200 STARTING MODEL: 3ATV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 % PEG-3350 W/V, 0.1 M HEPES, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.23300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.43000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.13900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.43000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.23300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.13900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 GLY A 382 REMARK 465 ASP A 383 REMARK 465 LYS A 384 REMARK 465 SER A 385 REMARK 465 GLU A 386 REMARK 465 ASN A 387 REMARK 465 VAL A 388 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 322 O HOH A 501 1.47 REMARK 500 O HOH A 692 O HOH A 901 2.08 REMARK 500 O HOH A 629 O HOH A 773 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 60 50.21 -116.53 REMARK 500 SER A 286 70.17 40.13 REMARK 500 LYS A 361 17.80 -146.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 910 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 911 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 912 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 913 DISTANCE = 6.45 ANGSTROMS REMARK 525 HOH A 914 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH A 915 DISTANCE = 7.07 ANGSTROMS REMARK 525 HOH A 916 DISTANCE = 7.64 ANGSTROMS REMARK 525 HOH A 917 DISTANCE = 7.82 ANGSTROMS REMARK 525 HOH A 918 DISTANCE = 7.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 404 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD2 REMARK 620 2 TYR A 15 O 136.6 REMARK 620 3 ATP A 401 O1B 106.3 97.5 REMARK 620 4 HOH A 614 O 102.5 99.5 114.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 175 OE2 REMARK 620 2 HOH A 591 O 116.1 REMARK 620 3 HOH A 609 O 91.4 94.5 REMARK 620 4 HOH A 621 O 85.6 89.0 176.1 REMARK 620 5 HOH A 649 O 137.0 106.9 86.5 94.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5BN8 RELATED DB: PDB REMARK 900 5BN8 CONTAINS THE APO HUMAN HSP70 NBD DOMAIN. REMARK 900 RELATED ID: 5BN9 RELATED DB: PDB REMARK 900 5BN9 CONTAINS THE SINGLE MUTANT R272K HUMAN HSP70 NBD DOMAIN REMARK 900 COMPLEXED WITH ADP REMARK 900 RELATED ID: 5BPL RELATED DB: PDB REMARK 900 5BPL CONTAINS THE SINGLE MUTANT R272K HUMAN HSP70 NBD DOMAIN REMARK 900 COMPLEXED WITH ADP AND PI DBREF 5BPM A 1 388 UNP P0DMV8 HS71A_HUMAN 1 388 SEQADV 5BPM GLN A 268 UNP P0DMV8 GLU 268 ENGINEERED MUTATION SEQADV 5BPM LYS A 272 UNP P0DMV8 ARG 272 ENGINEERED MUTATION SEQRES 1 A 388 MET ALA LYS ALA ALA ALA ILE GLY ILE ASP LEU GLY THR SEQRES 2 A 388 THR TYR SER CYS VAL GLY VAL PHE GLN HIS GLY LYS VAL SEQRES 3 A 388 GLU ILE ILE ALA ASN ASP GLN GLY ASN ARG THR THR PRO SEQRES 4 A 388 SER TYR VAL ALA PHE THR ASP THR GLU ARG LEU ILE GLY SEQRES 5 A 388 ASP ALA ALA LYS ASN GLN VAL ALA LEU ASN PRO GLN ASN SEQRES 6 A 388 THR VAL PHE ASP ALA LYS ARG LEU ILE GLY ARG LYS PHE SEQRES 7 A 388 GLY ASP PRO VAL VAL GLN SER ASP MET LYS HIS TRP PRO SEQRES 8 A 388 PHE GLN VAL ILE ASN ASP GLY ASP LYS PRO LYS VAL GLN SEQRES 9 A 388 VAL SER TYR LYS GLY GLU THR LYS ALA PHE TYR PRO GLU SEQRES 10 A 388 GLU ILE SER SER MET VAL LEU THR LYS MET LYS GLU ILE SEQRES 11 A 388 ALA GLU ALA TYR LEU GLY TYR PRO VAL THR ASN ALA VAL SEQRES 12 A 388 ILE THR VAL PRO ALA TYR PHE ASN ASP SER GLN ARG GLN SEQRES 13 A 388 ALA THR LYS ASP ALA GLY VAL ILE ALA GLY LEU ASN VAL SEQRES 14 A 388 LEU ARG ILE ILE ASN GLU PRO THR ALA ALA ALA ILE ALA SEQRES 15 A 388 TYR GLY LEU ASP ARG THR GLY LYS GLY GLU ARG ASN VAL SEQRES 16 A 388 LEU ILE PHE ASP LEU GLY GLY GLY THR PHE ASP VAL SER SEQRES 17 A 388 ILE LEU THR ILE ASP ASP GLY ILE PHE GLU VAL LYS ALA SEQRES 18 A 388 THR ALA GLY ASP THR HIS LEU GLY GLY GLU ASP PHE ASP SEQRES 19 A 388 ASN ARG LEU VAL ASN HIS PHE VAL GLU GLU PHE LYS ARG SEQRES 20 A 388 LYS HIS LYS LYS ASP ILE SER GLN ASN LYS ARG ALA VAL SEQRES 21 A 388 ARG ARG LEU ARG THR ALA CYS GLN ARG ALA LYS LYS THR SEQRES 22 A 388 LEU SER SER SER THR GLN ALA SER LEU GLU ILE ASP SER SEQRES 23 A 388 LEU PHE GLU GLY ILE ASP PHE TYR THR SER ILE THR ARG SEQRES 24 A 388 ALA ARG PHE GLU GLU LEU CYS SER ASP LEU PHE ARG SER SEQRES 25 A 388 THR LEU GLU PRO VAL GLU LYS ALA LEU ARG ASP ALA LYS SEQRES 26 A 388 LEU ASP LYS ALA GLN ILE HIS ASP LEU VAL LEU VAL GLY SEQRES 27 A 388 GLY SER THR ARG ILE PRO LYS VAL GLN LYS LEU LEU GLN SEQRES 28 A 388 ASP PHE PHE ASN GLY ARG ASP LEU ASN LYS SER ILE ASN SEQRES 29 A 388 PRO ASP GLU ALA VAL ALA TYR GLY ALA ALA VAL GLN ALA SEQRES 30 A 388 ALA ILE LEU MET GLY ASP LYS SER GLU ASN VAL HET ATP A 401 43 HET CL A 402 1 HET MG A 403 1 HET NA A 404 1 HET CL A 405 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION FORMUL 2 ATP C10 H16 N5 O13 P3 FORMUL 3 CL 2(CL 1-) FORMUL 4 MG MG 2+ FORMUL 5 NA NA 1+ FORMUL 7 HOH *418(H2 O) HELIX 1 AA1 GLY A 52 ASN A 57 1 6 HELIX 2 AA2 ASN A 62 GLN A 64 5 3 HELIX 3 AA3 ASP A 69 LEU A 73 5 5 HELIX 4 AA4 ASP A 80 LYS A 88 1 9 HELIX 5 AA5 TYR A 115 GLY A 136 1 22 HELIX 6 AA6 ASN A 151 ALA A 165 1 15 HELIX 7 AA7 GLU A 175 TYR A 183 1 9 HELIX 8 AA8 GLY A 184 THR A 188 5 5 HELIX 9 AA9 GLY A 229 LYS A 250 1 22 HELIX 10 AB1 ASN A 256 LEU A 274 1 19 HELIX 11 AB2 ARG A 299 CYS A 306 1 8 HELIX 12 AB3 CYS A 306 SER A 312 1 7 HELIX 13 AB4 THR A 313 LYS A 325 1 13 HELIX 14 AB5 ASP A 327 ILE A 331 5 5 HELIX 15 AB6 GLY A 338 ARG A 342 5 5 HELIX 16 AB7 ILE A 343 PHE A 354 1 12 HELIX 17 AB8 GLU A 367 MET A 381 1 15 SHEET 1 AA1 3 LYS A 25 ILE A 28 0 SHEET 2 AA1 3 TYR A 15 GLN A 22 -1 N VAL A 20 O GLU A 27 SHEET 3 AA1 3 THR A 38 PRO A 39 -1 O THR A 38 N SER A 16 SHEET 1 AA2 5 LYS A 25 ILE A 28 0 SHEET 2 AA2 5 TYR A 15 GLN A 22 -1 N VAL A 20 O GLU A 27 SHEET 3 AA2 5 ILE A 7 ASP A 10 -1 N ASP A 10 O CYS A 17 SHEET 4 AA2 5 ASN A 141 VAL A 146 1 O VAL A 143 N ILE A 7 SHEET 5 AA2 5 ASN A 168 ASN A 174 1 O ASN A 168 N ALA A 142 SHEET 1 AA3 3 ARG A 49 ILE A 51 0 SHEET 2 AA3 3 VAL A 42 PHE A 44 -1 N ALA A 43 O LEU A 50 SHEET 3 AA3 3 THR A 66 VAL A 67 -1 O VAL A 67 N VAL A 42 SHEET 1 AA4 3 GLN A 93 ASP A 97 0 SHEET 2 AA4 3 LYS A 100 TYR A 107 -1 O LYS A 100 N ASP A 97 SHEET 3 AA4 3 GLU A 110 PHE A 114 -1 O LYS A 112 N VAL A 105 SHEET 1 AA5 4 ILE A 216 ASP A 225 0 SHEET 2 AA5 4 PHE A 205 ASP A 213 -1 N ILE A 209 O ALA A 221 SHEET 3 AA5 4 GLU A 192 LEU A 200 -1 N VAL A 195 O LEU A 210 SHEET 4 AA5 4 ASP A 333 VAL A 337 1 O ASP A 333 N LEU A 196 SHEET 1 AA6 2 GLN A 279 PHE A 288 0 SHEET 2 AA6 2 ILE A 291 THR A 298 -1 O THR A 295 N LEU A 282 LINK OD2 ASP A 10 NA NA A 404 1555 1555 2.36 LINK O TYR A 15 NA NA A 404 1555 1555 2.33 LINK OE2 GLU A 175 MG MG A 403 1555 1555 2.51 LINK O1B ATP A 401 NA NA A 404 1555 1555 2.21 LINK MG MG A 403 O HOH A 591 1555 1555 2.35 LINK MG MG A 403 O HOH A 609 1555 1555 2.39 LINK MG MG A 403 O HOH A 621 1555 1555 2.42 LINK MG MG A 403 O HOH A 649 1555 1555 2.43 LINK NA NA A 404 O HOH A 614 1555 1555 2.33 SITE 1 AC1 29 ASP A 10 GLY A 12 THR A 13 THR A 14 SITE 2 AC1 29 TYR A 15 GLY A 201 GLY A 202 GLY A 203 SITE 3 AC1 29 THR A 204 GLY A 230 LYS A 271 LYS A 272 SITE 4 AC1 29 SER A 275 GLY A 338 GLY A 339 SER A 340 SITE 5 AC1 29 ARG A 342 ILE A 343 ASP A 366 NA A 404 SITE 6 AC1 29 HOH A 527 HOH A 580 HOH A 584 HOH A 591 SITE 7 AC1 29 HOH A 609 HOH A 614 HOH A 640 HOH A 649 SITE 8 AC1 29 HOH A 664 SITE 1 AC2 4 ASN A 31 ASP A 32 GLN A 33 LYS A 126 SITE 1 AC3 5 GLU A 175 HOH A 591 HOH A 609 HOH A 621 SITE 2 AC3 5 HOH A 649 SITE 1 AC4 4 ASP A 10 TYR A 15 ATP A 401 HOH A 614 SITE 1 AC5 1 ILE A 51 CRYST1 46.466 64.278 144.860 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021521 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015557 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006903 0.00000