HEADER FLUORESCENT PROTEIN 29-MAY-15 5BQL TITLE FLUORESCENT PROTEIN CYOFP COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLUORESCENT PROTEIN CYOFP; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTACMAEA QUADRICOLOR; SOURCE 3 ORGANISM_TAXID: 6118; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.SENS,N.ATAIE,H.L.NG,M.Z.LIN,J.CHU REVDAT 5 18-DEC-19 5BQL 1 COMPND REVDAT 4 10-OCT-18 5BQL 1 COMPND SOURCE REVDAT 3 20-SEP-17 5BQL 1 REMARK REVDAT 2 05-OCT-16 5BQL 1 JRNL REVDAT 1 01-JUN-16 5BQL 0 JRNL AUTH B.T.BAJAR,E.S.WANG,S.ZHANG,M.Z.LIN,J.CHU JRNL TITL A GUIDE TO FLUORESCENT PROTEIN FRET PAIRS. JRNL REF SENSORS BASEL SENSORS V. 16 2016 JRNL REFN ESSN 1424-8220 JRNL PMID 27649177 JRNL DOI 10.3390/S16091488 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0123 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 35895 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1858 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2472 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.3330 REMARK 3 BIN FREE R VALUE SET COUNT : 143 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7139 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 44 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.48000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : 2.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.475 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.275 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.250 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.223 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7362 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6923 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9921 ; 1.826 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16016 ; 0.979 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 892 ; 8.348 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 337 ;38.507 ;24.214 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1267 ;16.613 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;17.379 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1032 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8249 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1694 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3565 ; 1.381 ; 3.662 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3564 ; 1.381 ; 3.662 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4446 ; 2.205 ; 5.489 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 232 REMARK 3 ORIGIN FOR THE GROUP (A): -17.7316 -18.0599 39.2109 REMARK 3 T TENSOR REMARK 3 T11: 0.3201 T22: 0.2811 REMARK 3 T33: 0.2182 T12: -0.0802 REMARK 3 T13: 0.0487 T23: -0.1376 REMARK 3 L TENSOR REMARK 3 L11: 3.5859 L22: 3.3528 REMARK 3 L33: 2.3414 L12: 0.8889 REMARK 3 L13: 0.2292 L23: 0.8516 REMARK 3 S TENSOR REMARK 3 S11: 0.3501 S12: -0.6322 S13: -0.0505 REMARK 3 S21: 0.8555 S22: -0.1124 S23: 0.0278 REMARK 3 S31: 0.4478 S32: -0.1060 S33: -0.2377 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 7 B 232 REMARK 3 ORIGIN FOR THE GROUP (A): -24.7242 -7.8830 10.9322 REMARK 3 T TENSOR REMARK 3 T11: 0.0948 T22: 0.2497 REMARK 3 T33: 0.4116 T12: -0.0487 REMARK 3 T13: 0.0319 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 2.8470 L22: 3.0914 REMARK 3 L33: 2.2349 L12: -0.0310 REMARK 3 L13: -0.5731 L23: 0.1431 REMARK 3 S TENSOR REMARK 3 S11: 0.1850 S12: 0.3298 S13: 0.6301 REMARK 3 S21: -0.3416 S22: 0.0949 S23: 0.7088 REMARK 3 S31: -0.1624 S32: -0.4103 S33: -0.2799 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 7 C 231 REMARK 3 ORIGIN FOR THE GROUP (A): 6.7547 -2.2716 5.7309 REMARK 3 T TENSOR REMARK 3 T11: 0.0721 T22: 0.0674 REMARK 3 T33: 0.1342 T12: 0.0145 REMARK 3 T13: 0.0771 T23: 0.0278 REMARK 3 L TENSOR REMARK 3 L11: 2.8235 L22: 1.8824 REMARK 3 L33: 2.2171 L12: -0.4498 REMARK 3 L13: -0.8628 L23: 0.5928 REMARK 3 S TENSOR REMARK 3 S11: 0.1665 S12: 0.3467 S13: 0.3288 REMARK 3 S21: -0.2004 S22: -0.1225 S23: 0.0160 REMARK 3 S31: -0.1181 S32: 0.0701 S33: -0.0440 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 8 D 231 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9937 -19.3372 30.8581 REMARK 3 T TENSOR REMARK 3 T11: 0.0180 T22: 0.0977 REMARK 3 T33: 0.1770 T12: -0.0066 REMARK 3 T13: 0.0373 T23: 0.0276 REMARK 3 L TENSOR REMARK 3 L11: 2.0572 L22: 3.0417 REMARK 3 L33: 1.7062 L12: 0.0419 REMARK 3 L13: -0.1084 L23: -0.5997 REMARK 3 S TENSOR REMARK 3 S11: 0.0626 S12: -0.3574 S13: -0.1443 REMARK 3 S21: 0.1253 S22: -0.1033 S23: 0.0746 REMARK 3 S31: 0.0343 S32: 0.2641 S33: 0.0407 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5BQL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000209520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 12.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.016230 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38045 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 79.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.530 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.02200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1M HEPES PH REMARK 280 7.5, 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.06200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.62700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.38200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.62700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.06200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.38200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 GLY A 233 REMARK 465 HIS A 234 REMARK 465 LYS A 235 REMARK 465 LEU A 236 REMARK 465 ASN A 237 REMARK 465 GLY A 238 REMARK 465 MET A 239 REMARK 465 ASP A 240 REMARK 465 GLU A 241 REMARK 465 LEU A 242 REMARK 465 TYR A 243 REMARK 465 LYS A 244 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 GLY B 5 REMARK 465 GLU B 6 REMARK 465 GLY B 233 REMARK 465 HIS B 234 REMARK 465 LYS B 235 REMARK 465 LEU B 236 REMARK 465 ASN B 237 REMARK 465 GLY B 238 REMARK 465 MET B 239 REMARK 465 ASP B 240 REMARK 465 GLU B 241 REMARK 465 LEU B 242 REMARK 465 TYR B 243 REMARK 465 LYS B 244 REMARK 465 MET C 1 REMARK 465 VAL C 2 REMARK 465 SER C 3 REMARK 465 LYS C 4 REMARK 465 GLY C 5 REMARK 465 GLU C 6 REMARK 465 LEU C 232 REMARK 465 GLY C 233 REMARK 465 HIS C 234 REMARK 465 LYS C 235 REMARK 465 LEU C 236 REMARK 465 ASN C 237 REMARK 465 GLY C 238 REMARK 465 MET C 239 REMARK 465 ASP C 240 REMARK 465 GLU C 241 REMARK 465 LEU C 242 REMARK 465 TYR C 243 REMARK 465 LYS C 244 REMARK 465 MET D 1 REMARK 465 VAL D 2 REMARK 465 SER D 3 REMARK 465 LYS D 4 REMARK 465 GLY D 5 REMARK 465 GLU D 6 REMARK 465 GLU D 7 REMARK 465 LYS D 231 REMARK 465 LEU D 232 REMARK 465 GLY D 233 REMARK 465 HIS D 234 REMARK 465 LYS D 235 REMARK 465 LEU D 236 REMARK 465 ASN D 237 REMARK 465 GLY D 238 REMARK 465 MET D 239 REMARK 465 ASP D 240 REMARK 465 GLU D 241 REMARK 465 LEU D 242 REMARK 465 TYR D 243 REMARK 465 LYS D 244 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 8 -46.88 -172.21 REMARK 500 ASN A 24 41.31 39.51 REMARK 500 PHE A 73 48.17 -92.05 REMARK 500 ALA A 154 107.28 -171.73 REMARK 500 SER A 230 -162.12 -78.57 REMARK 500 LYS A 231 35.96 -142.92 REMARK 500 ASP B 116 73.92 60.49 REMARK 500 ASP B 210 71.54 43.77 REMARK 500 ASN B 211 52.89 36.71 REMARK 500 ASN C 24 50.98 19.12 REMARK 500 ASP C 60 -32.73 -33.87 REMARK 500 PHE C 73 46.57 -92.65 REMARK 500 PHE D 73 51.27 -99.06 REMARK 500 ASP D 116 64.69 34.34 REMARK 500 ASN D 133 27.11 -147.72 REMARK 500 ALA D 154 103.99 -164.08 REMARK 500 ASP D 155 80.32 3.55 REMARK 500 LYS D 207 145.11 -171.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 90 GLY B 91 -147.09 REMARK 500 THR B 189 ASN B 190 139.66 REMARK 500 ASN D 133 GLY D 134 31.81 REMARK 500 REMARK 500 REMARK: NULL DBREF 5BQL A 1 244 PDB 5BQL 5BQL 1 244 DBREF 5BQL B 1 244 PDB 5BQL 5BQL 1 244 DBREF 5BQL C 1 244 PDB 5BQL 5BQL 1 244 DBREF 5BQL D 1 244 PDB 5BQL 5BQL 1 244 SEQRES 1 A 242 MET VAL SER LYS GLY GLU GLU LEU ILE LYS GLU ASN MET SEQRES 2 A 242 HIS SER LYS LEU TYR LEU GLU GLY SER VAL ASN GLY HIS SEQRES 3 A 242 GLN PHE LYS CYS THR HIS GLU GLY GLU GLY LYS PRO TYR SEQRES 4 A 242 GLU GLY THR GLN THR ASN ARG ILE LYS VAL VAL GLU GLY SEQRES 5 A 242 GLY PRO LEU PRO PHE ALA PHE ASP ILE LEU ALA THR MET SEQRES 6 A 242 PHE NRQ SER LYS THR PHE ILE LYS TYR PRO LYS GLY LEU SEQRES 7 A 242 PRO ASP TYR PHE LYS GLN SER PHE PRO GLU GLY PHE THR SEQRES 8 A 242 TRP GLU ARG VAL MET VAL PHE GLU ASP GLY GLY VAL LEU SEQRES 9 A 242 THR ALA THR GLN ASP THR SER LEU GLN ASP GLY CYS LEU SEQRES 10 A 242 ILE TYR ASN VAL LYS LEU ARG GLY VAL ASN PHE PRO ALA SEQRES 11 A 242 ASN GLY PRO VAL MET GLN LYS LYS THR LEU GLY TRP GLU SEQRES 12 A 242 PRO SER THR GLU THR LEU TYR PRO ALA ASP GLY GLY LEU SEQRES 13 A 242 GLU GLY ARG CYS ASP LYS ALA LEU LYS LEU VAL GLY GLY SEQRES 14 A 242 GLY HIS LEU HIS CYS ASN PHE LYS THR THR TYR ARG SER SEQRES 15 A 242 LYS LYS PRO ALA THR ASN LEU LYS MET PRO GLY VAL HIS SEQRES 16 A 242 TYR VAL ASP ARG ARG LEU GLU ARG ILE LYS GLU ALA ASP SEQRES 17 A 242 ASN GLU THR TYR VAL GLU GLN HIS GLU VAL ALA VAL ALA SEQRES 18 A 242 ARG TYR CYS ASP LEU PRO SER LYS LEU GLY HIS LYS LEU SEQRES 19 A 242 ASN GLY MET ASP GLU LEU TYR LYS SEQRES 1 B 242 MET VAL SER LYS GLY GLU GLU LEU ILE LYS GLU ASN MET SEQRES 2 B 242 HIS SER LYS LEU TYR LEU GLU GLY SER VAL ASN GLY HIS SEQRES 3 B 242 GLN PHE LYS CYS THR HIS GLU GLY GLU GLY LYS PRO TYR SEQRES 4 B 242 GLU GLY THR GLN THR ASN ARG ILE LYS VAL VAL GLU GLY SEQRES 5 B 242 GLY PRO LEU PRO PHE ALA PHE ASP ILE LEU ALA THR MET SEQRES 6 B 242 PHE NRQ SER LYS THR PHE ILE LYS TYR PRO LYS GLY LEU SEQRES 7 B 242 PRO ASP TYR PHE LYS GLN SER PHE PRO GLU GLY PHE THR SEQRES 8 B 242 TRP GLU ARG VAL MET VAL PHE GLU ASP GLY GLY VAL LEU SEQRES 9 B 242 THR ALA THR GLN ASP THR SER LEU GLN ASP GLY CYS LEU SEQRES 10 B 242 ILE TYR ASN VAL LYS LEU ARG GLY VAL ASN PHE PRO ALA SEQRES 11 B 242 ASN GLY PRO VAL MET GLN LYS LYS THR LEU GLY TRP GLU SEQRES 12 B 242 PRO SER THR GLU THR LEU TYR PRO ALA ASP GLY GLY LEU SEQRES 13 B 242 GLU GLY ARG CYS ASP LYS ALA LEU LYS LEU VAL GLY GLY SEQRES 14 B 242 GLY HIS LEU HIS CYS ASN PHE LYS THR THR TYR ARG SER SEQRES 15 B 242 LYS LYS PRO ALA THR ASN LEU LYS MET PRO GLY VAL HIS SEQRES 16 B 242 TYR VAL ASP ARG ARG LEU GLU ARG ILE LYS GLU ALA ASP SEQRES 17 B 242 ASN GLU THR TYR VAL GLU GLN HIS GLU VAL ALA VAL ALA SEQRES 18 B 242 ARG TYR CYS ASP LEU PRO SER LYS LEU GLY HIS LYS LEU SEQRES 19 B 242 ASN GLY MET ASP GLU LEU TYR LYS SEQRES 1 C 242 MET VAL SER LYS GLY GLU GLU LEU ILE LYS GLU ASN MET SEQRES 2 C 242 HIS SER LYS LEU TYR LEU GLU GLY SER VAL ASN GLY HIS SEQRES 3 C 242 GLN PHE LYS CYS THR HIS GLU GLY GLU GLY LYS PRO TYR SEQRES 4 C 242 GLU GLY THR GLN THR ASN ARG ILE LYS VAL VAL GLU GLY SEQRES 5 C 242 GLY PRO LEU PRO PHE ALA PHE ASP ILE LEU ALA THR MET SEQRES 6 C 242 PHE NRQ SER LYS THR PHE ILE LYS TYR PRO LYS GLY LEU SEQRES 7 C 242 PRO ASP TYR PHE LYS GLN SER PHE PRO GLU GLY PHE THR SEQRES 8 C 242 TRP GLU ARG VAL MET VAL PHE GLU ASP GLY GLY VAL LEU SEQRES 9 C 242 THR ALA THR GLN ASP THR SER LEU GLN ASP GLY CYS LEU SEQRES 10 C 242 ILE TYR ASN VAL LYS LEU ARG GLY VAL ASN PHE PRO ALA SEQRES 11 C 242 ASN GLY PRO VAL MET GLN LYS LYS THR LEU GLY TRP GLU SEQRES 12 C 242 PRO SER THR GLU THR LEU TYR PRO ALA ASP GLY GLY LEU SEQRES 13 C 242 GLU GLY ARG CYS ASP LYS ALA LEU LYS LEU VAL GLY GLY SEQRES 14 C 242 GLY HIS LEU HIS CYS ASN PHE LYS THR THR TYR ARG SER SEQRES 15 C 242 LYS LYS PRO ALA THR ASN LEU LYS MET PRO GLY VAL HIS SEQRES 16 C 242 TYR VAL ASP ARG ARG LEU GLU ARG ILE LYS GLU ALA ASP SEQRES 17 C 242 ASN GLU THR TYR VAL GLU GLN HIS GLU VAL ALA VAL ALA SEQRES 18 C 242 ARG TYR CYS ASP LEU PRO SER LYS LEU GLY HIS LYS LEU SEQRES 19 C 242 ASN GLY MET ASP GLU LEU TYR LYS SEQRES 1 D 242 MET VAL SER LYS GLY GLU GLU LEU ILE LYS GLU ASN MET SEQRES 2 D 242 HIS SER LYS LEU TYR LEU GLU GLY SER VAL ASN GLY HIS SEQRES 3 D 242 GLN PHE LYS CYS THR HIS GLU GLY GLU GLY LYS PRO TYR SEQRES 4 D 242 GLU GLY THR GLN THR ASN ARG ILE LYS VAL VAL GLU GLY SEQRES 5 D 242 GLY PRO LEU PRO PHE ALA PHE ASP ILE LEU ALA THR MET SEQRES 6 D 242 PHE NRQ SER LYS THR PHE ILE LYS TYR PRO LYS GLY LEU SEQRES 7 D 242 PRO ASP TYR PHE LYS GLN SER PHE PRO GLU GLY PHE THR SEQRES 8 D 242 TRP GLU ARG VAL MET VAL PHE GLU ASP GLY GLY VAL LEU SEQRES 9 D 242 THR ALA THR GLN ASP THR SER LEU GLN ASP GLY CYS LEU SEQRES 10 D 242 ILE TYR ASN VAL LYS LEU ARG GLY VAL ASN PHE PRO ALA SEQRES 11 D 242 ASN GLY PRO VAL MET GLN LYS LYS THR LEU GLY TRP GLU SEQRES 12 D 242 PRO SER THR GLU THR LEU TYR PRO ALA ASP GLY GLY LEU SEQRES 13 D 242 GLU GLY ARG CYS ASP LYS ALA LEU LYS LEU VAL GLY GLY SEQRES 14 D 242 GLY HIS LEU HIS CYS ASN PHE LYS THR THR TYR ARG SER SEQRES 15 D 242 LYS LYS PRO ALA THR ASN LEU LYS MET PRO GLY VAL HIS SEQRES 16 D 242 TYR VAL ASP ARG ARG LEU GLU ARG ILE LYS GLU ALA ASP SEQRES 17 D 242 ASN GLU THR TYR VAL GLU GLN HIS GLU VAL ALA VAL ALA SEQRES 18 D 242 ARG TYR CYS ASP LEU PRO SER LYS LEU GLY HIS LYS LEU SEQRES 19 D 242 ASN GLY MET ASP GLU LEU TYR LYS HET NRQ A 67 23 HET NRQ B 67 23 HET NRQ C 67 23 HET NRQ D 67 23 HETNAM NRQ {(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO) HETNAM 2 NRQ PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 NRQ YL}ACETIC ACID HETSYN NRQ CHROMOPHORE (MET-TYR-GLY) FORMUL 1 NRQ 4(C16 H17 N3 O4 S) FORMUL 5 HOH *44(H2 O) HELIX 1 AA1 ALA A 58 PHE A 66 5 9 HELIX 2 AA2 ASP A 82 SER A 87 1 6 HELIX 3 AA3 PRO A 187 LEU A 191 5 5 HELIX 4 AA4 ALA B 58 PHE B 66 5 9 HELIX 5 AA5 ASP B 82 SER B 87 1 6 HELIX 6 AA6 GLY B 134 LYS B 139 1 6 HELIX 7 AA7 ALA C 58 PHE C 66 5 9 HELIX 8 AA8 SER C 70 ILE C 74 5 5 HELIX 9 AA9 PRO C 187 LEU C 191 5 5 HELIX 10 AB1 ALA D 58 PHE D 66 5 9 HELIX 11 AB2 ASP D 82 SER D 87 1 6 HELIX 12 AB3 PRO D 187 LEU D 191 5 5 SHEET 1 AA113 THR A 141 TRP A 144 0 SHEET 2 AA113 GLY A 157 LEU A 168 -1 O LYS A 167 N GLY A 143 SHEET 3 AA113 HIS A 173 SER A 184 -1 O LEU A 174 N LEU A 166 SHEET 4 AA113 PHE A 92 PHE A 100 -1 N THR A 93 O ARG A 183 SHEET 5 AA113 VAL A 105 GLN A 115 -1 O ALA A 108 N ARG A 96 SHEET 6 AA113 CYS A 118 VAL A 128 -1 O ILE A 120 N SER A 113 SHEET 7 AA113 MET A 13 VAL A 23 1 N HIS A 14 O LEU A 119 SHEET 8 AA113 HIS A 26 LYS A 37 -1 O GLY A 34 N SER A 15 SHEET 9 AA113 THR A 42 GLU A 51 -1 O ARG A 46 N GLU A 33 SHEET 10 AA113 TYR A 214 ARG A 224 -1 O VAL A 215 N ILE A 47 SHEET 11 AA113 HIS A 197 ALA A 209 -1 N ILE A 206 O GLU A 216 SHEET 12 AA113 SER A 147 ALA A 154 -1 N LEU A 151 O HIS A 197 SHEET 13 AA113 GLY A 157 LEU A 168 -1 O GLU A 159 N TYR A 152 SHEET 1 AA213 THR B 141 TRP B 144 0 SHEET 2 AA213 GLY B 157 LEU B 168 -1 O LYS B 167 N GLY B 143 SHEET 3 AA213 HIS B 173 SER B 184 -1 O TYR B 182 N LEU B 158 SHEET 4 AA213 PHE B 92 PHE B 100 -1 N VAL B 99 O ASN B 177 SHEET 5 AA213 VAL B 105 LEU B 114 -1 O GLN B 110 N TRP B 94 SHEET 6 AA213 LEU B 119 VAL B 128 -1 O ILE B 120 N SER B 113 SHEET 7 AA213 MET B 13 VAL B 23 1 N SER B 22 O GLY B 127 SHEET 8 AA213 HIS B 26 LYS B 37 -1 O CYS B 30 N LEU B 19 SHEET 9 AA213 THR B 42 GLU B 51 -1 O LYS B 48 N THR B 31 SHEET 10 AA213 TYR B 214 ARG B 224 -1 O VAL B 215 N ILE B 47 SHEET 11 AA213 HIS B 197 ALA B 209 -1 N ASP B 200 O VAL B 222 SHEET 12 AA213 SER B 147 ALA B 154 -1 N LEU B 151 O HIS B 197 SHEET 13 AA213 GLY B 157 LEU B 168 -1 O GLU B 159 N TYR B 152 SHEET 1 AA313 THR C 141 TRP C 144 0 SHEET 2 AA313 GLY C 157 LEU C 168 -1 O LYS C 167 N GLY C 143 SHEET 3 AA313 HIS C 173 SER C 184 -1 O CYS C 176 N LYS C 164 SHEET 4 AA313 PHE C 92 PHE C 100 -1 N VAL C 97 O LYS C 179 SHEET 5 AA313 VAL C 105 GLN C 115 -1 O ALA C 108 N ARG C 96 SHEET 6 AA313 CYS C 118 VAL C 128 -1 O ILE C 120 N SER C 113 SHEET 7 AA313 MET C 13 VAL C 23 1 N SER C 22 O GLY C 127 SHEET 8 AA313 HIS C 26 LYS C 37 -1 O HIS C 26 N VAL C 23 SHEET 9 AA313 THR C 42 GLU C 51 -1 O THR C 44 N GLU C 35 SHEET 10 AA313 TYR C 214 ARG C 224 -1 O VAL C 215 N ILE C 47 SHEET 11 AA313 HIS C 197 ALA C 209 -1 N ILE C 206 O GLU C 216 SHEET 12 AA313 SER C 147 ALA C 154 -1 N LEU C 151 O HIS C 197 SHEET 13 AA313 GLY C 157 LEU C 168 -1 O ARG C 161 N THR C 150 SHEET 1 AA413 THR D 141 TRP D 144 0 SHEET 2 AA413 GLY D 157 LEU D 168 -1 O LYS D 167 N LEU D 142 SHEET 3 AA413 HIS D 173 SER D 184 -1 O LEU D 174 N LEU D 166 SHEET 4 AA413 PHE D 92 PHE D 100 -1 N THR D 93 O ARG D 183 SHEET 5 AA413 VAL D 105 GLN D 115 -1 O THR D 112 N PHE D 92 SHEET 6 AA413 CYS D 118 VAL D 128 -1 O CYS D 118 N GLN D 115 SHEET 7 AA413 MET D 13 VAL D 23 1 N SER D 22 O GLY D 127 SHEET 8 AA413 HIS D 26 LYS D 37 -1 O GLY D 36 N MET D 13 SHEET 9 AA413 THR D 42 GLU D 51 -1 O LYS D 48 N THR D 31 SHEET 10 AA413 TYR D 214 ARG D 224 -1 O VAL D 215 N ILE D 47 SHEET 11 AA413 HIS D 197 ALA D 209 -1 N GLU D 204 O HIS D 218 SHEET 12 AA413 SER D 147 ALA D 154 -1 N LEU D 151 O HIS D 197 SHEET 13 AA413 GLY D 157 LEU D 168 -1 O ARG D 161 N THR D 150 LINK C PHE A 66 N1 NRQ A 67 1555 1555 1.26 LINK C3 NRQ A 67 N SER A 70 1555 1555 1.28 LINK C PHE B 66 N1 NRQ B 67 1555 1555 1.28 LINK C3 NRQ B 67 N SER B 70 1555 1555 1.28 LINK C PHE C 66 N1 NRQ C 67 1555 1555 1.27 LINK C3 NRQ C 67 N SER C 70 1555 1555 1.29 LINK C PHE D 66 N1 NRQ D 67 1555 1555 1.28 LINK C3 NRQ D 67 N SER D 70 1555 1555 1.28 CISPEP 1 GLY A 53 PRO A 54 0 -8.29 CISPEP 2 PHE A 88 PRO A 89 0 10.73 CISPEP 3 GLY B 53 PRO B 54 0 -4.13 CISPEP 4 PHE B 88 PRO B 89 0 7.73 CISPEP 5 ALA B 188 THR B 189 0 -17.14 CISPEP 6 GLY C 53 PRO C 54 0 -10.37 CISPEP 7 PHE C 88 PRO C 89 0 7.61 CISPEP 8 GLY D 53 PRO D 54 0 -1.48 CISPEP 9 PHE D 88 PRO D 89 0 10.23 CRYST1 74.124 102.764 123.254 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013491 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009731 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008113 0.00000