HEADER IMMUNE SYSTEM 29-MAY-15 5BQX TITLE CRYSTAL STRUCTURE OF HUMAN STING IN COMPLEX WITH 3'2'-CGAMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: STIMULATOR OF INTERFERON GENES PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HSTING, ENDOPLASMIC RETICULUM INTERFERON STIMULATOR, ERIS, COMPND 5 MEDIATOR OF IRF3 ACTIVATION, HMITA, TRANSMEMBRANE PROTEIN 173; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TMEM173, ERIS, MITA, STING; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STING, 3'2'-CGAMP, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.WU,X.ZHANG,Z.J.CHEN,C.CHEN REVDAT 6 06-MAR-24 5BQX 1 REMARK REVDAT 5 11-DEC-19 5BQX 1 REMARK REVDAT 4 06-SEP-17 5BQX 1 JRNL REMARK REVDAT 3 05-AUG-15 5BQX 1 JRNL REVDAT 2 22-JUL-15 5BQX 1 JRNL REVDAT 1 24-JUN-15 5BQX 0 JRNL AUTH H.SHI,J.WU,Z.J.CHEN,C.CHEN JRNL TITL MOLECULAR BASIS FOR THE SPECIFIC RECOGNITION OF THE METAZOAN JRNL TITL 2 CYCLIC GMP-AMP BY THE INNATE IMMUNE ADAPTOR PROTEIN STING. JRNL REF PROC.NATL.ACAD.SCI.USA V. 112 8947 2015 JRNL REFN ESSN 1091-6490 JRNL PMID 26150511 JRNL DOI 10.1073/PNAS.1507317112 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 15528 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6833 - 4.4463 1.00 1402 157 0.1747 0.1911 REMARK 3 2 4.4463 - 3.5295 1.00 1321 148 0.1529 0.2185 REMARK 3 3 3.5295 - 3.0834 1.00 1294 144 0.1720 0.2005 REMARK 3 4 3.0834 - 2.8015 1.00 1292 144 0.1811 0.2225 REMARK 3 5 2.8015 - 2.6007 1.00 1278 142 0.1856 0.2183 REMARK 3 6 2.6007 - 2.4474 1.00 1278 142 0.1871 0.2386 REMARK 3 7 2.4474 - 2.3248 1.00 1265 140 0.1984 0.2358 REMARK 3 8 2.3248 - 2.2236 0.86 1096 119 0.3628 0.4611 REMARK 3 9 2.2236 - 2.1380 0.98 1235 137 0.2345 0.2750 REMARK 3 10 2.1380 - 2.0642 1.00 1257 140 0.2362 0.2614 REMARK 3 11 2.0642 - 1.9997 1.00 1257 140 0.2486 0.3092 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1529 REMARK 3 ANGLE : 1.039 2083 REMARK 3 CHIRALITY : 0.043 225 REMARK 3 PLANARITY : 0.005 268 REMARK 3 DIHEDRAL : 15.337 575 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.5480 29.9065 -5.2153 REMARK 3 T TENSOR REMARK 3 T11: 0.2605 T22: 0.2961 REMARK 3 T33: 0.2084 T12: 0.0441 REMARK 3 T13: -0.0099 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 6.5449 L22: 9.0660 REMARK 3 L33: 8.2488 L12: 3.0825 REMARK 3 L13: -1.1488 L23: 0.5784 REMARK 3 S TENSOR REMARK 3 S11: 0.0783 S12: 0.0665 S13: 0.5448 REMARK 3 S21: -0.1737 S22: -0.0487 S23: 0.6057 REMARK 3 S31: -0.5518 S32: -0.9642 S33: -0.0259 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0371 20.1682 2.3799 REMARK 3 T TENSOR REMARK 3 T11: 0.3557 T22: 0.6219 REMARK 3 T33: 0.4105 T12: 0.0273 REMARK 3 T13: -0.1052 T23: 0.1973 REMARK 3 L TENSOR REMARK 3 L11: 4.2138 L22: 6.1565 REMARK 3 L33: 2.0747 L12: -4.5780 REMARK 3 L13: 0.2416 L23: 1.0277 REMARK 3 S TENSOR REMARK 3 S11: -0.0785 S12: -1.8692 S13: -0.0897 REMARK 3 S21: 0.7881 S22: 0.0480 S23: -0.7218 REMARK 3 S31: 0.4345 S32: 0.8291 S33: -0.0308 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0505 28.5992 -8.6017 REMARK 3 T TENSOR REMARK 3 T11: 0.3129 T22: 0.3586 REMARK 3 T33: 0.4133 T12: -0.0381 REMARK 3 T13: -0.0194 T23: 0.0655 REMARK 3 L TENSOR REMARK 3 L11: 7.3796 L22: 1.7234 REMARK 3 L33: 6.4398 L12: 0.6026 REMARK 3 L13: 0.4985 L23: 1.9319 REMARK 3 S TENSOR REMARK 3 S11: 0.1014 S12: -0.2414 S13: -0.3263 REMARK 3 S21: 0.0232 S22: 0.0320 S23: -0.4894 REMARK 3 S31: 0.5568 S32: 0.7245 S33: -0.1042 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 212 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.9904 22.9537 -9.5024 REMARK 3 T TENSOR REMARK 3 T11: 0.2644 T22: 0.3500 REMARK 3 T33: 0.3037 T12: 0.0328 REMARK 3 T13: 0.0016 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 8.6888 L22: 3.5445 REMARK 3 L33: 1.0881 L12: 4.7660 REMARK 3 L13: -0.7591 L23: -0.2605 REMARK 3 S TENSOR REMARK 3 S11: -0.1501 S12: 0.2672 S13: -0.4856 REMARK 3 S21: 0.0280 S22: 0.0873 S23: -0.3646 REMARK 3 S31: 0.0316 S32: 0.1415 S33: 0.0725 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 263 THROUGH 280 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2113 30.0955 -19.4102 REMARK 3 T TENSOR REMARK 3 T11: 0.3319 T22: 0.3384 REMARK 3 T33: 0.2252 T12: -0.0254 REMARK 3 T13: 0.0162 T23: -0.0203 REMARK 3 L TENSOR REMARK 3 L11: 3.7749 L22: 3.2543 REMARK 3 L33: 7.6644 L12: -1.5166 REMARK 3 L13: 5.1934 L23: -1.1816 REMARK 3 S TENSOR REMARK 3 S11: 0.2048 S12: 0.0878 S13: -0.0699 REMARK 3 S21: 0.0878 S22: -0.0715 S23: 0.2595 REMARK 3 S31: 0.2664 S32: -0.0171 S33: -0.2461 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 281 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5190 37.9823 -8.4443 REMARK 3 T TENSOR REMARK 3 T11: 0.2897 T22: 0.2173 REMARK 3 T33: 0.2838 T12: 0.0070 REMARK 3 T13: 0.0051 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 5.5882 L22: 7.9724 REMARK 3 L33: 5.3819 L12: -1.4751 REMARK 3 L13: 4.4834 L23: -5.1669 REMARK 3 S TENSOR REMARK 3 S11: -0.2492 S12: -0.4052 S13: 0.5706 REMARK 3 S21: 0.2050 S22: -0.2219 S23: 0.0326 REMARK 3 S31: -0.9052 S32: -0.5740 S33: 0.5623 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 302 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5218 35.8220 -5.3282 REMARK 3 T TENSOR REMARK 3 T11: 0.3460 T22: 0.4730 REMARK 3 T33: 0.4246 T12: -0.1446 REMARK 3 T13: -0.0254 T23: -0.0412 REMARK 3 L TENSOR REMARK 3 L11: 7.9126 L22: 5.9566 REMARK 3 L33: 2.1279 L12: 0.7368 REMARK 3 L13: -0.5301 L23: 1.0207 REMARK 3 S TENSOR REMARK 3 S11: 0.5037 S12: -0.3283 S13: 0.8114 REMARK 3 S21: 0.7015 S22: -0.2739 S23: 0.0233 REMARK 3 S31: -0.8867 S32: 1.3165 S33: -0.0469 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 325 THROUGH 336 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2306 38.3257 -6.6905 REMARK 3 T TENSOR REMARK 3 T11: 0.3424 T22: 0.5024 REMARK 3 T33: 0.7109 T12: -0.0646 REMARK 3 T13: 0.0826 T23: -0.1039 REMARK 3 L TENSOR REMARK 3 L11: 3.9559 L22: 6.0119 REMARK 3 L33: 8.0313 L12: -0.0891 REMARK 3 L13: 4.9839 L23: 1.0653 REMARK 3 S TENSOR REMARK 3 S11: -0.4252 S12: -0.8468 S13: 2.3750 REMARK 3 S21: 1.4903 S22: -0.0495 S23: 0.5921 REMARK 3 S31: -0.1045 S32: -0.4787 S33: 0.4457 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BQX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97940 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15799 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1 M REMARK 280 TRISODIUM CITRATE, PH 5.8, 25% PEG4000, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 17.94450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 55.53050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 55.53050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 8.97225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 55.53050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 55.53050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 26.91675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 55.53050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.53050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 8.97225 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 55.53050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.53050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 26.91675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 17.94450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -17.94450 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 574 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 590 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 138 REMARK 465 LEU A 139 REMARK 465 ALA A 140 REMARK 465 PRO A 141 REMARK 465 ALA A 142 REMARK 465 GLU A 143 REMARK 465 ILE A 144 REMARK 465 SER A 145 REMARK 465 ALA A 146 REMARK 465 VAL A 147 REMARK 465 CYS A 148 REMARK 465 GLU A 149 REMARK 465 LYS A 150 REMARK 465 GLY A 151 REMARK 465 ASN A 188 REMARK 465 LEU A 189 REMARK 465 LEU A 190 REMARK 465 ALA A 318 REMARK 465 ASP A 319 REMARK 465 ASP A 320 REMARK 465 SER A 321 REMARK 465 GLU A 337 REMARK 465 LYS A 338 REMARK 465 GLU A 339 REMARK 465 GLU A 340 REMARK 465 VAL A 341 REMARK 465 THR A 342 REMARK 465 VAL A 343 REMARK 465 GLY A 344 REMARK 465 SER A 345 REMARK 465 LEU A 346 REMARK 465 LYS A 347 REMARK 465 THR A 348 REMARK 465 SER A 349 REMARK 465 ALA A 350 REMARK 465 VAL A 351 REMARK 465 PRO A 352 REMARK 465 SER A 353 REMARK 465 THR A 354 REMARK 465 SER A 355 REMARK 465 THR A 356 REMARK 465 MET A 357 REMARK 465 SER A 358 REMARK 465 GLN A 359 REMARK 465 GLU A 360 REMARK 465 PRO A 361 REMARK 465 GLU A 362 REMARK 465 LEU A 363 REMARK 465 LEU A 364 REMARK 465 ILE A 365 REMARK 465 SER A 366 REMARK 465 GLY A 367 REMARK 465 MET A 368 REMARK 465 GLU A 369 REMARK 465 LYS A 370 REMARK 465 PRO A 371 REMARK 465 LEU A 372 REMARK 465 PRO A 373 REMARK 465 LEU A 374 REMARK 465 ARG A 375 REMARK 465 THR A 376 REMARK 465 ASP A 377 REMARK 465 PHE A 378 REMARK 465 SER A 379 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 503 O HOH A 581 1.98 REMARK 500 O HOH A 561 O HOH A 578 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 167 -72.20 -143.79 REMARK 500 ASP A 216 117.70 -162.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4UR A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KSY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF STING IN COMPLEX WITH CGAMP DBREF 5BQX A 138 379 UNP Q86WV6 STING_HUMAN 138 379 SEQADV 5BQX ARG A 232 UNP Q86WV6 HIS 232 CONFLICT SEQRES 1 A 242 GLY LEU ALA PRO ALA GLU ILE SER ALA VAL CYS GLU LYS SEQRES 2 A 242 GLY ASN PHE ASN VAL ALA HIS GLY LEU ALA TRP SER TYR SEQRES 3 A 242 TYR ILE GLY TYR LEU ARG LEU ILE LEU PRO GLU LEU GLN SEQRES 4 A 242 ALA ARG ILE ARG THR TYR ASN GLN HIS TYR ASN ASN LEU SEQRES 5 A 242 LEU ARG GLY ALA VAL SER GLN ARG LEU TYR ILE LEU LEU SEQRES 6 A 242 PRO LEU ASP CYS GLY VAL PRO ASP ASN LEU SER MET ALA SEQRES 7 A 242 ASP PRO ASN ILE ARG PHE LEU ASP LYS LEU PRO GLN GLN SEQRES 8 A 242 THR GLY ASP ARG ALA GLY ILE LYS ASP ARG VAL TYR SER SEQRES 9 A 242 ASN SER ILE TYR GLU LEU LEU GLU ASN GLY GLN ARG ALA SEQRES 10 A 242 GLY THR CYS VAL LEU GLU TYR ALA THR PRO LEU GLN THR SEQRES 11 A 242 LEU PHE ALA MET SER GLN TYR SER GLN ALA GLY PHE SER SEQRES 12 A 242 ARG GLU ASP ARG LEU GLU GLN ALA LYS LEU PHE CYS ARG SEQRES 13 A 242 THR LEU GLU ASP ILE LEU ALA ASP ALA PRO GLU SER GLN SEQRES 14 A 242 ASN ASN CYS ARG LEU ILE ALA TYR GLN GLU PRO ALA ASP SEQRES 15 A 242 ASP SER SER PHE SER LEU SER GLN GLU VAL LEU ARG HIS SEQRES 16 A 242 LEU ARG GLN GLU GLU LYS GLU GLU VAL THR VAL GLY SER SEQRES 17 A 242 LEU LYS THR SER ALA VAL PRO SER THR SER THR MET SER SEQRES 18 A 242 GLN GLU PRO GLU LEU LEU ILE SER GLY MET GLU LYS PRO SEQRES 19 A 242 LEU PRO LEU ARG THR ASP PHE SER HET 4UR A 401 67 HETNAM 4UR 3'2'-CGAMP HETSYN 4UR 2-AMINO-9-[(2S,5R,7R,8R,10R,12AR,14R,15R,15AS,16R)-7- HETSYN 2 4UR (6-AMINO-9H-PURIN-9-YL)-2,10,15,16-TETRAHYDROXY-2,10- HETSYN 3 4UR DIOXIDOOCTAHYDRO-12H-5,8-METHANOFURO[3,2-L][1,3,6,9, HETSYN 4 4UR 11,2,10]PENTAOXADIPHOSPHACYCLOTETRADECIN-14-YL]-1,9- HETSYN 5 4UR DIHYDRO-6H-PURIN-6-ONE FORMUL 2 4UR C20 H24 N10 O13 P2 FORMUL 3 HOH *90(H2 O) HELIX 1 AA1 ASN A 152 TYR A 167 1 16 HELIX 2 AA2 TYR A 167 TYR A 186 1 20 HELIX 3 AA3 ASN A 211 ASP A 216 1 6 HELIX 4 AA4 THR A 263 TYR A 274 1 12 HELIX 5 AA5 SER A 275 GLY A 278 5 4 HELIX 6 AA6 SER A 280 GLU A 282 5 3 HELIX 7 AA7 ASP A 283 ALA A 302 1 20 HELIX 8 AA8 SER A 324 GLU A 336 1 13 SHEET 1 AA1 5 ILE A 219 LYS A 224 0 SHEET 2 AA1 5 SER A 243 GLU A 249 -1 O ILE A 244 N ASP A 223 SHEET 3 AA1 5 GLN A 252 TYR A 261 -1 O ALA A 254 N LEU A 247 SHEET 4 AA1 5 LEU A 198 PRO A 203 1 N LEU A 201 O GLU A 260 SHEET 5 AA1 5 CYS A 309 TYR A 314 1 O ILE A 312 N LEU A 202 SHEET 1 AA2 2 GLN A 228 ARG A 232 0 SHEET 2 AA2 2 ILE A 235 TYR A 240 -1 O TYR A 240 N GLN A 228 SITE 1 AC1 18 SER A 162 TYR A 163 GLY A 166 TYR A 167 SITE 2 AC1 18 ILE A 235 ARG A 238 VAL A 239 TYR A 240 SITE 3 AC1 18 SER A 241 GLU A 260 THR A 263 PRO A 264 SITE 4 AC1 18 HOH A 510 HOH A 511 HOH A 512 HOH A 513 SITE 5 AC1 18 HOH A 527 HOH A 531 CRYST1 111.061 111.061 35.889 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009004 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009004 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027864 0.00000