HEADER VIRAL PROTEIN 29-MAY-15 5BR0 TITLE CRYSTAL STRUCTURE OF HEMAGGLUTININ OF A/TAIWAN/2/2013 (H6N1) CAVEAT 5BR0 FUC E 6 HAS WRONG CHIRALITY AT ATOM C1 FUC F 6 HAS WRONG CAVEAT 2 5BR0 CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ HA1 CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMAGGLUTININ HA2 CHAIN; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/TAIWAN/2/2013 (H6N1)); SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 STRAIN: A/TAIWAN/2/2013 (H6N1); SOURCE 5 GENE: HA; SOURCE 6 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10469; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/TAIWAN/2/2013 (H6N1)); SOURCE 10 ORGANISM_TAXID: 11320; SOURCE 11 STRAIN: A/TAIWAN/2/2013 (H6N1); SOURCE 12 GENE: HA; SOURCE 13 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10469 KEYWDS INFLUENZA, HEAMGGLUTININ, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.NI,E.KONDRASHKINA,Q.WANG REVDAT 2 29-JUL-20 5BR0 1 CAVEAT COMPND REMARK HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 12-AUG-15 5BR0 0 JRNL AUTH F.NI,E.KONDRASHKINA,Q.WANG JRNL TITL STRUCTURAL AND FUNCTIONAL STUDIES OF INFLUENZA VIRUS A/H6 JRNL TITL 2 HEMAGGLUTININ. JRNL REF PLOS ONE V. 7 34576 2015 JRNL REFN ESSN 1932-6203 JRNL PMID 26226046 JRNL DOI 10.1371/JOURNAL.PONE.0134576 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 94687 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 4744 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7916 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 254 REMARK 3 SOLVENT ATOMS : 805 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.250 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BR0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210401. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94738 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 63.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE, PH 9.0, 10% PEG 20000 REMARK 280 AND 2% 1,4-DIOXANE., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 34650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 57.01000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 98.74422 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -57.01000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 98.74422 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 35080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 465 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 454 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 441 O HOH B 530 1.82 REMARK 500 O HOH A 522 O HOH A 699 1.85 REMARK 500 O HOH A 610 O HOH A 675 1.86 REMARK 500 O HOH C 684 O HOH C 708 1.91 REMARK 500 OE1 GLN B 163 O HOH B 401 1.91 REMARK 500 O HOH D 460 O HOH D 561 1.94 REMARK 500 OD1 ASN A 208 O HOH A 501 1.97 REMARK 500 OE1 GLU C 21 O HOH C 501 1.98 REMARK 500 O HOH B 528 O HOH B 543 1.98 REMARK 500 O HOH A 686 O HOH A 723 2.00 REMARK 500 O HOH C 668 O HOH C 700 2.01 REMARK 500 O ILE A 151 O HOH A 502 2.02 REMARK 500 O HOH B 537 O HOH B 540 2.03 REMARK 500 O HOH A 582 O HOH A 737 2.03 REMARK 500 O HOH D 430 O HOH D 549 2.04 REMARK 500 O HOH C 513 O HOH C 660 2.04 REMARK 500 O HOH A 689 O HOH A 697 2.04 REMARK 500 O HOH A 714 O HOH A 742 2.06 REMARK 500 O HOH C 711 O HOH D 578 2.06 REMARK 500 O HOH D 521 O HOH D 574 2.07 REMARK 500 NZ LYS C 264 O HOH C 502 2.07 REMARK 500 O HOH C 677 O HOH C 703 2.07 REMARK 500 O HOH D 547 O HOH D 577 2.07 REMARK 500 O HOH A 598 O HOH A 714 2.07 REMARK 500 O4 NAG C 402 O HOH C 503 2.07 REMARK 500 O HOH A 664 O HOH B 544 2.08 REMARK 500 O HOH D 408 O HOH D 533 2.08 REMARK 500 O HOH C 518 O HOH C 696 2.08 REMARK 500 OE2 GLU A 205 O HOH A 503 2.08 REMARK 500 O HOH C 688 O HOH C 699 2.09 REMARK 500 O ALA C 279 O HOH C 504 2.09 REMARK 500 O HOH D 553 O HOH D 568 2.10 REMARK 500 O HOH C 652 O HOH D 526 2.10 REMARK 500 O HOH B 421 O HOH B 529 2.10 REMARK 500 O HOH A 529 O HOH A 699 2.10 REMARK 500 O HOH B 548 O HOH B 555 2.11 REMARK 500 O HOH A 585 O HOH B 407 2.11 REMARK 500 OE1 GLU A 21 O HOH A 504 2.11 REMARK 500 OE2 GLU A 21 O HOH A 505 2.12 REMARK 500 O HOH C 509 O HOH C 672 2.12 REMARK 500 O HOH D 480 O HOH D 563 2.12 REMARK 500 O HOH D 515 O HOH D 560 2.12 REMARK 500 O HOH C 567 O HOH C 697 2.14 REMARK 500 O HOH B 420 O HOH B 486 2.14 REMARK 500 N ASN A 46 O HOH A 506 2.14 REMARK 500 O HOH A 572 O HOH A 729 2.15 REMARK 500 O HOH B 514 O HOH B 515 2.15 REMARK 500 NH2 ARG A 321 O HOH A 507 2.17 REMARK 500 O HOH A 703 O HOH A 721 2.18 REMARK 500 O HOH C 528 O HOH C 671 2.18 REMARK 500 REMARK 500 THIS ENTRY HAS 54 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 559 O HOH C 654 1554 1.89 REMARK 500 O HOH B 510 O HOH B 523 3565 1.97 REMARK 500 O HOH D 498 O HOH D 514 2555 2.01 REMARK 500 O HOH C 694 O HOH D 558 2555 2.02 REMARK 500 O HOH D 451 O HOH D 474 2555 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 53 -113.02 51.32 REMARK 500 SER A 143 -159.50 -141.92 REMARK 500 SER A 156 -27.76 64.15 REMARK 500 TRP A 253 -67.83 -120.45 REMARK 500 ALA B 5 -66.18 -93.18 REMARK 500 ARG B 127 -129.45 55.61 REMARK 500 LYS C 53 -112.43 51.25 REMARK 500 CYS C 135 70.15 -119.58 REMARK 500 SER C 143 -159.74 -141.90 REMARK 500 SER C 156 -28.06 64.45 REMARK 500 TRP C 253 -68.21 -121.16 REMARK 500 ALA D 5 -66.54 -94.44 REMARK 500 ARG D 127 -128.96 56.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5BQY RELATED DB: PDB REMARK 900 RELATED ID: 5BQZ RELATED DB: PDB REMARK 900 RELATED ID: 5BR3 RELATED DB: PDB REMARK 900 RELATED ID: 5BR6 RELATED DB: PDB DBREF 5BR0 A 1 326 PDB 5BR0 5BR0 1 326 DBREF 5BR0 B 1 171 PDB 5BR0 5BR0 1 171 DBREF 5BR0 C 1 326 PDB 5BR0 5BR0 1 326 DBREF 5BR0 D 1 171 PDB 5BR0 5BR0 1 171 SEQRES 1 A 326 ASP LYS ILE CYS ILE GLY TYR HIS ALA ASN ASN SER THR SEQRES 2 A 326 THR GLN VAL ASP THR LEU LEU GLU LYS ASN VAL THR VAL SEQRES 3 A 326 THR HIS SER VAL GLU LEU LEU GLU ASN GLN LYS GLU LYS SEQRES 4 A 326 ARG PHE CYS LYS ILE MET ASN LYS ALA PRO LEU ASP LEU SEQRES 5 A 326 LYS ASP CYS THR ILE GLU GLY TRP ILE LEU GLY ASN PRO SEQRES 6 A 326 LYS CYS ASP LEU LEU LEU GLY ASP GLN SER TRP SER TYR SEQRES 7 A 326 ILE VAL GLU ARG PRO ASN ALA GLN ASN GLY ILE CYS TYR SEQRES 8 A 326 PRO GLY VAL LEU ASN GLU LEU GLU GLU LEU LYS ALA PHE SEQRES 9 A 326 ILE GLY SER GLY GLU ARG VAL GLU ARG PHE GLU MET PHE SEQRES 10 A 326 PRO LYS SER THR TRP ALA GLY VAL ASP THR SER ARG GLY SEQRES 11 A 326 VAL THR ASN ALA CYS PRO SER TYR THR ILE ASP SER SER SEQRES 12 A 326 PHE TYR ARG ASN LEU VAL TRP ILE VAL LYS THR ASP SER SEQRES 13 A 326 ALA THR TYR PRO VAL ILE LYS GLY THR TYR ASN ASN THR SEQRES 14 A 326 GLY THR GLN PRO ILE LEU TYR PHE TRP GLY VAL HIS HIS SEQRES 15 A 326 PRO LEU ASP THR THR VAL GLN ASP ASN LEU TYR GLY SER SEQRES 16 A 326 GLY ASP LYS TYR VAL ARG MET GLY THR GLU SER MET ASN SEQRES 17 A 326 PHE ALA LYS SER PRO GLU ILE ALA ALA ARG PRO ALA VAL SEQRES 18 A 326 ASN GLY GLN ARG SER ARG ILE ASP TYR TYR TRP SER VAL SEQRES 19 A 326 LEU ARG PRO GLY GLU THR LEU ASN VAL GLU SER ASN GLY SEQRES 20 A 326 ASN LEU ILE ALA PRO TRP TYR ALA TYR LYS PHE VAL SER SEQRES 21 A 326 THR ASN LYS LYS GLY ALA VAL PHE LYS SER ASP LEU PRO SEQRES 22 A 326 ILE GLU ASN CYS ASP ALA THR CYS GLN THR ILE THR GLY SEQRES 23 A 326 VAL LEU ARG THR ASN LYS THR PHE GLN ASN VAL SER PRO SEQRES 24 A 326 LEU TRP ILE GLY GLU CYS PRO LYS TYR VAL LYS SER GLU SEQRES 25 A 326 SER LEU ARG LEU ALA THR GLY LEU ARG ASN VAL PRO GLN SEQRES 26 A 326 ILE SEQRES 1 B 171 GLY ILE PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 B 171 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 B 171 GLU ASN SER GLN GLY SER GLY TYR ALA ALA ASP ARG GLU SEQRES 4 B 171 SER THR GLN LYS ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 B 171 ASN SER ILE ILE ASN LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 B 171 VAL ASP HIS GLU PHE SER ASN LEU GLU ARG ARG ILE GLY SEQRES 7 B 171 ASN LEU ASN LYS ARG MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 B 171 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 B 171 GLU ARG THR LEU ASP LEU HIS ASP ALA ASN VAL LYS ASN SEQRES 10 B 171 LEU TYR GLU LYS VAL LYS SER GLN LEU ARG ASP ASN ALA SEQRES 11 B 171 ASN ASP LEU GLY ASN GLY CYS PHE GLU PHE TRP HIS LYS SEQRES 12 B 171 CYS ASP ASN GLU CYS MET GLU SER VAL LYS ASN GLY THR SEQRES 13 B 171 TYR ASP TYR PRO LYS TYR GLN LYS GLU SER LYS LEU ASN SEQRES 14 B 171 ARG GLN SEQRES 1 C 326 ASP LYS ILE CYS ILE GLY TYR HIS ALA ASN ASN SER THR SEQRES 2 C 326 THR GLN VAL ASP THR LEU LEU GLU LYS ASN VAL THR VAL SEQRES 3 C 326 THR HIS SER VAL GLU LEU LEU GLU ASN GLN LYS GLU LYS SEQRES 4 C 326 ARG PHE CYS LYS ILE MET ASN LYS ALA PRO LEU ASP LEU SEQRES 5 C 326 LYS ASP CYS THR ILE GLU GLY TRP ILE LEU GLY ASN PRO SEQRES 6 C 326 LYS CYS ASP LEU LEU LEU GLY ASP GLN SER TRP SER TYR SEQRES 7 C 326 ILE VAL GLU ARG PRO ASN ALA GLN ASN GLY ILE CYS TYR SEQRES 8 C 326 PRO GLY VAL LEU ASN GLU LEU GLU GLU LEU LYS ALA PHE SEQRES 9 C 326 ILE GLY SER GLY GLU ARG VAL GLU ARG PHE GLU MET PHE SEQRES 10 C 326 PRO LYS SER THR TRP ALA GLY VAL ASP THR SER ARG GLY SEQRES 11 C 326 VAL THR ASN ALA CYS PRO SER TYR THR ILE ASP SER SER SEQRES 12 C 326 PHE TYR ARG ASN LEU VAL TRP ILE VAL LYS THR ASP SER SEQRES 13 C 326 ALA THR TYR PRO VAL ILE LYS GLY THR TYR ASN ASN THR SEQRES 14 C 326 GLY THR GLN PRO ILE LEU TYR PHE TRP GLY VAL HIS HIS SEQRES 15 C 326 PRO LEU ASP THR THR VAL GLN ASP ASN LEU TYR GLY SER SEQRES 16 C 326 GLY ASP LYS TYR VAL ARG MET GLY THR GLU SER MET ASN SEQRES 17 C 326 PHE ALA LYS SER PRO GLU ILE ALA ALA ARG PRO ALA VAL SEQRES 18 C 326 ASN GLY GLN ARG SER ARG ILE ASP TYR TYR TRP SER VAL SEQRES 19 C 326 LEU ARG PRO GLY GLU THR LEU ASN VAL GLU SER ASN GLY SEQRES 20 C 326 ASN LEU ILE ALA PRO TRP TYR ALA TYR LYS PHE VAL SER SEQRES 21 C 326 THR ASN LYS LYS GLY ALA VAL PHE LYS SER ASP LEU PRO SEQRES 22 C 326 ILE GLU ASN CYS ASP ALA THR CYS GLN THR ILE THR GLY SEQRES 23 C 326 VAL LEU ARG THR ASN LYS THR PHE GLN ASN VAL SER PRO SEQRES 24 C 326 LEU TRP ILE GLY GLU CYS PRO LYS TYR VAL LYS SER GLU SEQRES 25 C 326 SER LEU ARG LEU ALA THR GLY LEU ARG ASN VAL PRO GLN SEQRES 26 C 326 ILE SEQRES 1 D 171 GLY ILE PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 D 171 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 D 171 GLU ASN SER GLN GLY SER GLY TYR ALA ALA ASP ARG GLU SEQRES 4 D 171 SER THR GLN LYS ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 D 171 ASN SER ILE ILE ASN LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 D 171 VAL ASP HIS GLU PHE SER ASN LEU GLU ARG ARG ILE GLY SEQRES 7 D 171 ASN LEU ASN LYS ARG MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 D 171 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 D 171 GLU ARG THR LEU ASP LEU HIS ASP ALA ASN VAL LYS ASN SEQRES 10 D 171 LEU TYR GLU LYS VAL LYS SER GLN LEU ARG ASP ASN ALA SEQRES 11 D 171 ASN ASP LEU GLY ASN GLY CYS PHE GLU PHE TRP HIS LYS SEQRES 12 D 171 CYS ASP ASN GLU CYS MET GLU SER VAL LYS ASN GLY THR SEQRES 13 D 171 TYR ASP TYR PRO LYS TYR GLN LYS GLU SER LYS LEU ASN SEQRES 14 D 171 ARG GLN HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET FUC E 6 10 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET FUC F 6 10 HET NAG A 401 14 HET NAG A 402 14 HET NAG A 403 14 HET NAG A 404 14 HET NAG C 401 14 HET NAG C 402 14 HET NAG C 403 14 HET NAG C 404 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE FORMUL 5 NAG 12(C8 H15 N O6) FORMUL 5 BMA 2(C6 H12 O6) FORMUL 5 MAN 4(C6 H12 O6) FORMUL 5 FUC 2(C6 H12 O5) FORMUL 15 HOH *805(H2 O) HELIX 1 AA1 THR A 56 GLY A 63 1 8 HELIX 2 AA2 ASN A 64 ASP A 68 5 5 HELIX 3 AA3 GLU A 97 SER A 107 1 11 HELIX 4 AA4 PRO A 118 TRP A 122 5 5 HELIX 5 AA5 ASP A 185 GLY A 194 1 10 HELIX 6 AA6 ASP B 37 MET B 59 1 23 HELIX 7 AA7 GLU B 74 ARG B 127 1 54 HELIX 8 AA8 ASP B 145 ASN B 154 1 10 HELIX 9 AA9 ASP B 158 GLN B 171 1 14 HELIX 10 AB1 THR C 56 GLY C 63 1 8 HELIX 11 AB2 ASN C 64 ASP C 68 5 5 HELIX 12 AB3 GLU C 97 SER C 107 1 11 HELIX 13 AB4 PRO C 118 TRP C 122 5 5 HELIX 14 AB5 ASP C 185 GLY C 194 1 10 HELIX 15 AB6 ASP D 37 MET D 59 1 23 HELIX 16 AB7 GLU D 74 ARG D 127 1 54 HELIX 17 AB8 ASP D 145 ASN D 154 1 10 HELIX 18 AB9 ASP D 158 GLN D 171 1 14 SHEET 1 AA1 5 GLY B 31 ALA B 36 0 SHEET 2 AA1 5 TYR B 22 ASN B 28 -1 N TYR B 24 O ALA B 35 SHEET 3 AA1 5 LYS A 2 TYR A 7 -1 N LYS A 2 O GLU B 27 SHEET 4 AA1 5 CYS B 137 PHE B 140 -1 O PHE B 138 N ILE A 3 SHEET 5 AA1 5 ALA B 130 ASP B 132 -1 N ASN B 131 O GLU B 139 SHEET 1 AA2 2 GLN A 15 VAL A 16 0 SHEET 2 AA2 2 VAL A 24 THR A 25 -1 O VAL A 24 N VAL A 16 SHEET 1 AA3 2 SER A 29 GLU A 31 0 SHEET 2 AA3 2 ARG A 315 ALA A 317 -1 O LEU A 316 N VAL A 30 SHEET 1 AA4 3 LEU A 33 GLU A 34 0 SHEET 2 AA4 3 PHE A 294 GLN A 295 1 O PHE A 294 N GLU A 34 SHEET 3 AA4 3 LYS A 307 TYR A 308 1 O LYS A 307 N GLN A 295 SHEET 1 AA5 2 PHE A 41 ILE A 44 0 SHEET 2 AA5 2 ILE A 274 ALA A 279 1 O CYS A 277 N LYS A 43 SHEET 1 AA6 3 LEU A 50 ASP A 51 0 SHEET 2 AA6 3 ILE A 79 GLU A 81 1 O VAL A 80 N LEU A 50 SHEET 3 AA6 3 VAL A 267 LYS A 269 1 O PHE A 268 N ILE A 79 SHEET 1 AA7 6 GLN A 74 SER A 75 0 SHEET 2 AA7 6 GLY A 108 GLU A 115 -1 O VAL A 111 N GLN A 74 SHEET 3 AA7 6 TYR A 254 SER A 260 -1 O LYS A 257 N GLU A 112 SHEET 4 AA7 6 ILE A 174 HIS A 182 -1 N LEU A 175 O TYR A 256 SHEET 5 AA7 6 ARG A 227 LEU A 235 -1 O ARG A 227 N HIS A 182 SHEET 6 AA7 6 GLY A 93 LEU A 95 1 N VAL A 94 O TYR A 230 SHEET 1 AA8 6 GLN A 74 SER A 75 0 SHEET 2 AA8 6 GLY A 108 GLU A 115 -1 O VAL A 111 N GLN A 74 SHEET 3 AA8 6 TYR A 254 SER A 260 -1 O LYS A 257 N GLU A 112 SHEET 4 AA8 6 ILE A 174 HIS A 182 -1 N LEU A 175 O TYR A 256 SHEET 5 AA8 6 LEU A 249 PRO A 252 -1 O ILE A 250 N GLY A 179 SHEET 6 AA8 6 LEU A 148 TRP A 150 -1 N VAL A 149 O ALA A 251 SHEET 1 AA9 4 ILE A 162 ASN A 167 0 SHEET 2 AA9 4 THR A 240 SER A 245 -1 O VAL A 243 N GLY A 164 SHEET 3 AA9 4 VAL A 200 GLY A 203 -1 N ARG A 201 O GLU A 244 SHEET 4 AA9 4 ASN A 208 LYS A 211 -1 O PHE A 209 N MET A 202 SHEET 1 AB1 3 GLY A 286 VAL A 287 0 SHEET 2 AB1 3 CYS A 281 THR A 283 -1 N THR A 283 O GLY A 286 SHEET 3 AB1 3 TRP A 301 GLY A 303 -1 O ILE A 302 N GLN A 282 SHEET 1 AB2 5 GLY D 31 ALA D 36 0 SHEET 2 AB2 5 TYR D 22 ASN D 28 -1 N TYR D 24 O ALA D 35 SHEET 3 AB2 5 LYS C 2 TYR C 7 -1 N LYS C 2 O GLU D 27 SHEET 4 AB2 5 CYS D 137 PHE D 140 -1 O PHE D 138 N ILE C 3 SHEET 5 AB2 5 ALA D 130 ASP D 132 -1 N ASN D 131 O GLU D 139 SHEET 1 AB3 2 GLN C 15 VAL C 16 0 SHEET 2 AB3 2 VAL C 24 THR C 25 -1 O VAL C 24 N VAL C 16 SHEET 1 AB4 2 SER C 29 GLU C 31 0 SHEET 2 AB4 2 ARG C 315 ALA C 317 -1 O LEU C 316 N VAL C 30 SHEET 1 AB5 3 LEU C 33 GLU C 34 0 SHEET 2 AB5 3 PHE C 294 GLN C 295 1 O PHE C 294 N GLU C 34 SHEET 3 AB5 3 LYS C 307 TYR C 308 1 O LYS C 307 N GLN C 295 SHEET 1 AB6 2 PHE C 41 ILE C 44 0 SHEET 2 AB6 2 ILE C 274 ALA C 279 1 O CYS C 277 N LYS C 43 SHEET 1 AB7 3 LEU C 50 ASP C 51 0 SHEET 2 AB7 3 ILE C 79 GLU C 81 1 O VAL C 80 N LEU C 50 SHEET 3 AB7 3 VAL C 267 LYS C 269 1 O PHE C 268 N ILE C 79 SHEET 1 AB8 6 GLN C 74 SER C 75 0 SHEET 2 AB8 6 GLY C 108 GLU C 115 -1 O VAL C 111 N GLN C 74 SHEET 3 AB8 6 TYR C 254 SER C 260 -1 O LYS C 257 N GLU C 112 SHEET 4 AB8 6 ILE C 174 HIS C 182 -1 N LEU C 175 O TYR C 256 SHEET 5 AB8 6 ARG C 227 LEU C 235 -1 O ARG C 227 N HIS C 182 SHEET 6 AB8 6 GLY C 93 LEU C 95 1 N VAL C 94 O TYR C 230 SHEET 1 AB9 6 GLN C 74 SER C 75 0 SHEET 2 AB9 6 GLY C 108 GLU C 115 -1 O VAL C 111 N GLN C 74 SHEET 3 AB9 6 TYR C 254 SER C 260 -1 O LYS C 257 N GLU C 112 SHEET 4 AB9 6 ILE C 174 HIS C 182 -1 N LEU C 175 O TYR C 256 SHEET 5 AB9 6 LEU C 249 PRO C 252 -1 O ILE C 250 N GLY C 179 SHEET 6 AB9 6 LEU C 148 TRP C 150 -1 N VAL C 149 O ALA C 251 SHEET 1 AC1 2 VAL C 125 ASP C 126 0 SHEET 2 AC1 2 VAL C 152 LYS C 153 -1 O VAL C 152 N ASP C 126 SHEET 1 AC2 4 ILE C 162 ASN C 167 0 SHEET 2 AC2 4 THR C 240 SER C 245 -1 O VAL C 243 N GLY C 164 SHEET 3 AC2 4 VAL C 200 GLY C 203 -1 N ARG C 201 O GLU C 244 SHEET 4 AC2 4 ASN C 208 LYS C 211 -1 O PHE C 209 N MET C 202 SHEET 1 AC3 3 GLY C 286 VAL C 287 0 SHEET 2 AC3 3 CYS C 281 THR C 283 -1 N THR C 283 O GLY C 286 SHEET 3 AC3 3 TRP C 301 GLY C 303 -1 O ILE C 302 N GLN C 282 SSBOND 1 CYS A 4 CYS B 137 1555 1555 2.04 SSBOND 2 CYS A 42 CYS A 277 1555 1555 2.04 SSBOND 3 CYS A 55 CYS A 67 1555 1555 2.04 SSBOND 4 CYS A 90 CYS A 135 1555 1555 2.05 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.03 SSBOND 6 CYS B 144 CYS B 148 1555 1555 2.05 SSBOND 7 CYS C 4 CYS D 137 1555 1555 2.05 SSBOND 8 CYS C 42 CYS C 277 1555 1555 2.04 SSBOND 9 CYS C 55 CYS C 67 1555 1555 2.04 SSBOND 10 CYS C 90 CYS C 135 1555 1555 2.05 SSBOND 11 CYS C 281 CYS C 305 1555 1555 2.03 SSBOND 12 CYS D 144 CYS D 148 1555 1555 2.05 LINK ND2 ASN A 11 C1 NAG A 401 1555 1555 1.46 LINK ND2 ASN A 23 C1 NAG A 402 1555 1555 1.48 LINK ND2 ASN A 167 C1 NAG A 403 1555 1555 1.46 LINK ND2 ASN A 291 C1 NAG A 404 1555 1555 1.46 LINK ND2 ASN B 154 C1 NAG E 1 1555 1555 1.47 LINK ND2 ASN C 11 C1 NAG C 401 1555 1555 1.47 LINK ND2 ASN C 23 C1 NAG C 402 1555 1555 1.47 LINK ND2 ASN C 167 C1 NAG C 403 1555 1555 1.46 LINK ND2 ASN C 291 C1 NAG C 404 1555 1555 1.47 LINK ND2 ASN D 154 C1 NAG F 1 1555 1555 1.47 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O3 NAG E 1 C1 FUC E 6 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.43 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.43 LINK O6 BMA E 3 C1 MAN E 5 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.43 LINK O3 NAG F 1 C1 FUC F 6 1555 1555 1.43 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.43 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.43 LINK O6 BMA F 3 C1 MAN F 5 1555 1555 1.43 CISPEP 1 GLN A 325 ILE A 326 0 5.71 CRYST1 114.020 114.020 164.440 90.00 90.00 120.00 P 3 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008770 0.005064 0.000000 0.00000 SCALE2 0.000000 0.010127 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006081 0.00000