HEADER CHAPERONE 01-JUN-15 5BS2 TITLE CRYSTAL STRUCTURE OF RBCX-IIA FROM CHLAMYDOMONAS REINHARDTII IN TITLE 2 COMPLEX WITH RBCL C-TERMINAL TAIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN,CRRBCX-IIA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 462-473,UNP RESIDUES 44-156; COMPND 5 SYNONYM: RUBISCO LARGE SUBUNIT; COMPND 6 EC: 4.1.1.39; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN; COMPND 10 CHAIN: R; COMPND 11 FRAGMENT: UNP RESIDUES 462-467; COMPND 12 SYNONYM: RUBISCO LARGE SUBUNIT; COMPND 13 EC: 4.1.1.39; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 3 ORGANISM_TAXID: 3055; SOURCE 4 GENE: RBCL, CGL41, CHLREDRAFT_162607; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PHUE; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 11 ORGANISM_TAXID: 3055; SOURCE 12 GENE: RBCL; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_PLASMID: PHUE KEYWDS RBCX, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR A.BRACHER,T.HAUSER,C.LIU,F.U.HARTL,M.HAYER-HARTL REVDAT 3 10-JAN-24 5BS2 1 REMARK REVDAT 2 09-SEP-15 5BS2 1 JRNL REVDAT 1 05-AUG-15 5BS2 0 JRNL AUTH A.BRACHER,T.HAUSER,C.LIU,F.U.HARTL,M.HAYER-HARTL JRNL TITL STRUCTURAL ANALYSIS OF THE RUBISCO-ASSEMBLY CHAPERONE JRNL TITL 2 RBCX-II FROM CHLAMYDOMONAS REINHARDTII. JRNL REF PLOS ONE V. 10 35448 2015 JRNL REFN ESSN 1932-6203 JRNL PMID 26305355 JRNL DOI 10.1371/JOURNAL.PONE.0135448 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 15009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 810 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1022 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.3820 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.3930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1800 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 87 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.97000 REMARK 3 B22 (A**2) : 4.42000 REMARK 3 B33 (A**2) : -3.84000 REMARK 3 B12 (A**2) : 0.57000 REMARK 3 B13 (A**2) : 2.89000 REMARK 3 B23 (A**2) : -1.71000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.205 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.161 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.071 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1832 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1740 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2471 ; 1.423 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3975 ; 1.092 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 229 ; 5.352 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 85 ;25.937 ;23.176 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 314 ;16.444 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;26.063 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 267 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2090 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 428 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 44 156 B 44 156 5742 0.120 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 156 REMARK 3 RESIDUE RANGE : D 1 D 27 REMARK 3 ORIGIN FOR THE GROUP (A): 6.2187 -3.9168 -7.9377 REMARK 3 T TENSOR REMARK 3 T11: 0.0509 T22: 0.0340 REMARK 3 T33: 0.2265 T12: -0.0380 REMARK 3 T13: -0.0666 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 0.6145 L22: 1.8875 REMARK 3 L33: 6.7318 L12: -0.9640 REMARK 3 L13: -1.6633 L23: 2.9220 REMARK 3 S TENSOR REMARK 3 S11: 0.0056 S12: -0.0521 S13: 0.0746 REMARK 3 S21: -0.1170 S22: 0.1778 S23: -0.0984 REMARK 3 S31: -0.1725 S32: 0.2534 S33: -0.1834 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 44 B 156 REMARK 3 RESIDUE RANGE : E 1 E 39 REMARK 3 ORIGIN FOR THE GROUP (A): -6.6235 6.0456 6.9631 REMARK 3 T TENSOR REMARK 3 T11: 0.0291 T22: 0.0570 REMARK 3 T33: 0.1902 T12: -0.0144 REMARK 3 T13: -0.0672 T23: 0.0332 REMARK 3 L TENSOR REMARK 3 L11: 0.7516 L22: 3.5052 REMARK 3 L33: 3.2952 L12: -1.2293 REMARK 3 L13: -1.0514 L23: 2.8798 REMARK 3 S TENSOR REMARK 3 S11: -0.0484 S12: 0.0502 S13: -0.0299 REMARK 3 S21: 0.0351 S22: -0.0357 S23: 0.0963 REMARK 3 S31: 0.0209 S32: -0.2399 S33: 0.0841 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : R 462 R 467 REMARK 3 ORIGIN FOR THE GROUP (A): -14.0404 15.0261 1.5303 REMARK 3 T TENSOR REMARK 3 T11: 0.3321 T22: 0.4151 REMARK 3 T33: 0.4353 T12: 0.1560 REMARK 3 T13: -0.0843 T23: 0.0734 REMARK 3 L TENSOR REMARK 3 L11: 18.3691 L22: 11.2203 REMARK 3 L33: 2.8869 L12: -14.3247 REMARK 3 L13: -7.2320 L23: 5.6376 REMARK 3 S TENSOR REMARK 3 S11: 0.0552 S12: 1.0665 S13: -1.0939 REMARK 3 S21: 0.0897 S22: -0.6644 S23: 0.8189 REMARK 3 S31: 0.0042 S32: -0.3552 S33: 0.6092 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5BS2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210457. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99988 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15820 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 49.781 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08100 REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.49400 REMARK 200 R SYM FOR SHELL (I) : 0.49400 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5BS1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH 8.5, 25% PEG2000 MME, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP A 25 REMARK 465 LYS A 26 REMARK 465 GLU A 27 REMARK 465 ILE A 28 REMARK 465 LYS A 29 REMARK 465 PHE A 30 REMARK 465 GLU A 31 REMARK 465 PHE A 32 REMARK 465 ASP A 33 REMARK 465 THR A 34 REMARK 465 ILE A 35 REMARK 465 ASP A 36 REMARK 465 PRO A 37 REMARK 465 ALA A 38 REMARK 465 ASP A 39 REMARK 465 SER A 40 REMARK 465 PHE A 41 REMARK 465 SER A 42 REMARK 465 GLY A 43 REMARK 465 TRP B 25 REMARK 465 LYS B 26 REMARK 465 GLU B 27 REMARK 465 ILE B 28 REMARK 465 LYS B 29 REMARK 465 PHE B 30 REMARK 465 GLU B 31 REMARK 465 PHE B 32 REMARK 465 ASP B 33 REMARK 465 THR B 34 REMARK 465 ILE B 35 REMARK 465 ASP B 36 REMARK 465 PRO B 37 REMARK 465 ALA B 38 REMARK 465 ASP B 39 REMARK 465 SER B 40 REMARK 465 PHE B 41 REMARK 465 SER B 42 REMARK 465 GLY B 43 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 49 CG CD CE NZ REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 ARG A 152 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 152 CG CD NE CZ NH1 NH2 REMARK 470 GLU R 464 CG CD OE1 OE2 REMARK 470 LYS R 466 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 110 O HOH A 201 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 218 O HOH B 234 1644 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 64 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 97 179.02 -38.65 REMARK 500 REMARK 500 REMARK: NULL DBREF 5BS2 A 25 36 UNP P00877 RBL_CHLRE 462 473 DBREF 5BS2 A 44 156 UNP A8HQH2 A8HQH2_CHLRE 44 156 DBREF 5BS2 B 25 36 UNP P00877 RBL_CHLRE 462 473 DBREF 5BS2 B 44 156 UNP A8HQH2 A8HQH2_CHLRE 44 156 DBREF 5BS2 R 462 467 UNP P00877 RBL_SYNP6 462 467 SEQADV 5BS2 PRO A 37 UNP P00877 LINKER SEQADV 5BS2 ALA A 38 UNP P00877 LINKER SEQADV 5BS2 ASP A 39 UNP P00877 LINKER SEQADV 5BS2 SER A 40 UNP P00877 LINKER SEQADV 5BS2 PHE A 41 UNP P00877 LINKER SEQADV 5BS2 SER A 42 UNP P00877 LINKER SEQADV 5BS2 GLY A 43 UNP P00877 LINKER SEQADV 5BS2 PRO B 37 UNP P00877 LINKER SEQADV 5BS2 ALA B 38 UNP P00877 LINKER SEQADV 5BS2 ASP B 39 UNP P00877 LINKER SEQADV 5BS2 SER B 40 UNP P00877 LINKER SEQADV 5BS2 PHE B 41 UNP P00877 LINKER SEQADV 5BS2 SER B 42 UNP P00877 LINKER SEQADV 5BS2 GLY B 43 UNP P00877 LINKER SEQRES 1 A 132 TRP LYS GLU ILE LYS PHE GLU PHE ASP THR ILE ASP PRO SEQRES 2 A 132 ALA ASP SER PHE SER GLY ALA SER PRO GLU ARG LYS ALA SEQRES 3 A 132 ALA VAL ALA LEU ARG SER LEU PHE THR PHE VAL ALA ALA SEQRES 4 A 132 ARG VAL VAL LEU GLU GLN LEU GLN GLY PRO GLY GLY PRO SEQRES 5 A 132 GLU THR THR TYR ASN GLN GLN ALA TYR LEU ASP LEU MET SEQRES 6 A 132 ASP PHE LEU GLY THR PRO MET LYS GLY ASP GLY GLY ASP SEQRES 7 A 132 GLU TRP MET ALA ALA VAL MET ARG LYS ASN HIS ALA LEU SEQRES 8 A 132 ALA LEU ARG LEU MET GLU VAL ARG GLU ALA TYR LEU ASP SEQRES 9 A 132 GLU PHE GLU TRP GLY LYS THR MET GLU MET ALA SER ARG SEQRES 10 A 132 GLU THR ARG GLU ALA ASN THR ARG LEU MET ARG ALA ALA SEQRES 11 A 132 ALA MET SEQRES 1 B 132 TRP LYS GLU ILE LYS PHE GLU PHE ASP THR ILE ASP PRO SEQRES 2 B 132 ALA ASP SER PHE SER GLY ALA SER PRO GLU ARG LYS ALA SEQRES 3 B 132 ALA VAL ALA LEU ARG SER LEU PHE THR PHE VAL ALA ALA SEQRES 4 B 132 ARG VAL VAL LEU GLU GLN LEU GLN GLY PRO GLY GLY PRO SEQRES 5 B 132 GLU THR THR TYR ASN GLN GLN ALA TYR LEU ASP LEU MET SEQRES 6 B 132 ASP PHE LEU GLY THR PRO MET LYS GLY ASP GLY GLY ASP SEQRES 7 B 132 GLU TRP MET ALA ALA VAL MET ARG LYS ASN HIS ALA LEU SEQRES 8 B 132 ALA LEU ARG LEU MET GLU VAL ARG GLU ALA TYR LEU ASP SEQRES 9 B 132 GLU PHE GLU TRP GLY LYS THR MET GLU MET ALA SER ARG SEQRES 10 B 132 GLU THR ARG GLU ALA ASN THR ARG LEU MET ARG ALA ALA SEQRES 11 B 132 ALA MET SEQRES 1 R 6 TRP LYS GLU ILE LYS PHE FORMUL 4 HOH *87(H2 O) HELIX 1 AA1 SER A 45 GLY A 72 1 28 HELIX 2 AA2 THR A 78 GLY A 93 1 16 HELIX 3 AA3 GLY A 98 GLY A 100 5 3 HELIX 4 AA4 GLY A 101 ASN A 112 1 12 HELIX 5 AA5 ASN A 112 LEU A 127 1 16 HELIX 6 AA6 GLU A 131 ALA A 155 1 25 HELIX 7 AA7 SER B 45 GLN B 71 1 27 HELIX 8 AA8 THR B 78 GLY B 93 1 16 HELIX 9 AA9 GLY B 101 ASN B 112 1 12 HELIX 10 AB1 ASN B 112 LEU B 127 1 16 HELIX 11 AB2 GLU B 131 ALA B 155 1 25 CRYST1 34.217 38.525 50.355 88.47 81.53 67.92 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029225 -0.011853 -0.004726 0.00000 SCALE2 0.000000 0.028011 0.000877 0.00000 SCALE3 0.000000 0.000000 0.020088 0.00000