HEADER LIGASE 02-JUN-15 5BSW TITLE CRYSTAL STRUCTURE OF 4-COUMARATE:COA LIGASE DELTA-V341 MUTANT TITLE 2 COMPLEXED WITH FERULOYL ADENYLATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-COUMARATE--COA LIGASE 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 4CL 2,4-COUMAROYL-COA SYNTHASE 2; COMPND 5 EC: 6.2.1.12; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 GENE: 4CL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS 4-COUMARATE:COA LIGASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.LI,S.K.NAIR REVDAT 2 06-MAR-24 5BSW 1 JRNL REMARK REVDAT 1 11-MAY-16 5BSW 0 JRNL AUTH Z.LI,S.K.NAIR JRNL TITL STRUCTURAL BASIS FOR SPECIFICITY AND FLEXIBILITY IN A PLANT JRNL TITL 2 4-COUMARATE:COA LIGASE. JRNL REF STRUCTURE V. 23 2032 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 26412334 JRNL DOI 10.1016/J.STR.2015.08.012 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 62119 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3302 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3858 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2450 REMARK 3 BIN FREE R VALUE SET COUNT : 192 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8120 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 571 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.62000 REMARK 3 B22 (A**2) : -1.20000 REMARK 3 B33 (A**2) : -1.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.241 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.199 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.368 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8366 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11361 ; 1.362 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1050 ; 5.922 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 338 ;36.166 ;24.970 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1445 ;15.773 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;18.777 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1307 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6232 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5258 ; 0.631 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8545 ; 1.171 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3108 ; 1.747 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2816 ; 2.873 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5BSW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210484. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65538 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.46900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMP-COA COMPLEX (DV341 MUTANT): 25% REMARK 280 (W/V) PEG 3350, 0.2 M AMMONIUM ACETATE, 0.1 M TRIS PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 280K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.63800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.39650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.59300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.39650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.63800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.59300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 LYS A 3 REMARK 465 ASP A 4 REMARK 465 THR A 5 REMARK 465 LYS A 6 REMARK 465 GLN A 7 REMARK 465 VAL A 8 REMARK 465 LEU A 535 REMARK 465 ALA A 536 REMARK 465 ALA A 537 REMARK 465 GLY A 538 REMARK 465 LEU A 539 REMARK 465 PRO A 540 REMARK 465 ASN A 541 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 LYS B 3 REMARK 465 ASP B 4 REMARK 465 THR B 5 REMARK 465 LYS B 6 REMARK 465 GLN B 7 REMARK 465 LYS B 534 REMARK 465 LEU B 535 REMARK 465 ALA B 536 REMARK 465 ALA B 537 REMARK 465 GLY B 538 REMARK 465 LEU B 539 REMARK 465 PRO B 540 REMARK 465 ASN B 541 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 969 O HOH B 976 1.98 REMARK 500 O HOH A 969 O HOH B 950 2.07 REMARK 500 O HOH B 704 O HOH B 840 2.12 REMARK 500 OE2 GLU B 170 O HOH B 701 2.15 REMARK 500 O HOH A 816 O HOH A 969 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS B 171 CB - CA - C ANGL. DEV. = -18.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 38 27.87 -146.81 REMARK 500 LYS A 50 -5.99 78.67 REMARK 500 ASP A 153 -71.97 -109.94 REMARK 500 CYS A 231 71.80 -111.70 REMARK 500 VAL A 244 -64.06 -101.11 REMARK 500 ALA A 309 -22.19 82.18 REMARK 500 ALA A 338 -5.65 -143.68 REMARK 500 ASP A 433 166.22 166.74 REMARK 500 LYS A 442 -114.58 51.62 REMARK 500 ILE A 490 135.62 -36.33 REMARK 500 PHE B 38 24.17 -145.60 REMARK 500 CYS B 43 -57.36 -123.19 REMARK 500 LYS B 77 -0.08 70.36 REMARK 500 VAL B 244 -62.06 -98.89 REMARK 500 ALA B 309 -19.37 85.32 REMARK 500 ALA B 338 -6.95 -144.44 REMARK 500 ASP B 433 -175.03 177.60 REMARK 500 LYS B 442 -126.84 49.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 987 DISTANCE = 6.10 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4UW A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4UW B 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5BSM RELATED DB: PDB REMARK 900 RELATED ID: 5BSR RELATED DB: PDB REMARK 900 RELATED ID: 5BST RELATED DB: PDB REMARK 900 RELATED ID: 5BSU RELATED DB: PDB REMARK 900 RELATED ID: 5BSV RELATED DB: PDB DBREF 5BSW A 1 541 UNP O24146 4CL2_TOBAC 1 542 DBREF 5BSW B 1 541 UNP O24146 4CL2_TOBAC 1 542 SEQADV 5BSW A UNP O24146 VAL 341 DELETION SEQADV 5BSW B UNP O24146 VAL 341 DELETION SEQRES 1 A 541 MET GLU LYS ASP THR LYS GLN VAL ASP ILE ILE PHE ARG SEQRES 2 A 541 SER LYS LEU PRO ASP ILE TYR ILE PRO ASN HIS LEU PRO SEQRES 3 A 541 LEU HIS SER TYR CYS PHE GLU ASN ILE SER GLU PHE SER SEQRES 4 A 541 SER ARG PRO CYS LEU ILE ASN GLY ALA ASN LYS GLN ILE SEQRES 5 A 541 TYR THR TYR ALA ASP VAL GLU LEU ASN SER ARG LYS VAL SEQRES 6 A 541 ALA ALA GLY LEU HIS LYS GLN GLY ILE GLN PRO LYS ASP SEQRES 7 A 541 THR ILE MET ILE LEU LEU PRO ASN SER PRO GLU PHE VAL SEQRES 8 A 541 PHE ALA PHE ILE GLY ALA SER TYR LEU GLY ALA ILE SER SEQRES 9 A 541 THR MET ALA ASN PRO LEU PHE THR PRO ALA GLU VAL VAL SEQRES 10 A 541 LYS GLN ALA LYS ALA SER SER ALA LYS ILE ILE VAL THR SEQRES 11 A 541 GLN ALA CYS HIS VAL ASN LYS VAL LYS ASP TYR ALA PHE SEQRES 12 A 541 GLU ASN ASP VAL LYS ILE ILE CYS ILE ASP SER ALA PRO SEQRES 13 A 541 GLU GLY CYS LEU HIS PHE SER VAL LEU THR GLN ALA ASN SEQRES 14 A 541 GLU HIS ASP ILE PRO GLU VAL GLU ILE GLN PRO ASP ASP SEQRES 15 A 541 VAL VAL ALA LEU PRO TYR SER SER GLY THR THR GLY LEU SEQRES 16 A 541 PRO LYS GLY VAL MET LEU THR HIS LYS GLY LEU VAL THR SEQRES 17 A 541 SER VAL ALA GLN GLN VAL ASP GLY GLU ASN PRO ASN LEU SEQRES 18 A 541 TYR ILE HIS SER GLU ASP VAL MET LEU CYS VAL LEU PRO SEQRES 19 A 541 LEU PHE HIS ILE TYR SER LEU ASN SER VAL LEU LEU CYS SEQRES 20 A 541 GLY LEU ARG VAL GLY ALA ALA ILE LEU ILE MET GLN LYS SEQRES 21 A 541 PHE ASP ILE VAL SER PHE LEU GLU LEU ILE GLN ARG TYR SEQRES 22 A 541 LYS VAL THR ILE GLY PRO PHE VAL PRO PRO ILE VAL LEU SEQRES 23 A 541 ALA ILE ALA LYS SER PRO MET VAL ASP ASP TYR ASP LEU SEQRES 24 A 541 SER SER VAL ARG THR VAL MET SER GLY ALA ALA PRO LEU SEQRES 25 A 541 GLY LYS GLU LEU GLU ASP THR VAL ARG ALA LYS PHE PRO SEQRES 26 A 541 ASN ALA LYS LEU GLY GLN GLY TYR GLY MET THR GLU ALA SEQRES 27 A 541 GLY PRO LEU ALA MET CYS LEU ALA PHE ALA LYS GLU PRO SEQRES 28 A 541 PHE GLU ILE LYS SER GLY ALA CYS GLY THR VAL VAL ARG SEQRES 29 A 541 ASN ALA GLU MET LYS ILE VAL ASP PRO LYS THR GLY ASN SEQRES 30 A 541 SER LEU PRO ARG ASN GLN SER GLY GLU ILE CYS ILE ARG SEQRES 31 A 541 GLY ASP GLN ILE MET LYS GLY TYR LEU ASN ASP PRO GLU SEQRES 32 A 541 ALA THR ALA ARG THR ILE ASP LYS GLU GLY TRP LEU TYR SEQRES 33 A 541 THR GLY ASP ILE GLY TYR ILE ASP ASP ASP ASP GLU LEU SEQRES 34 A 541 PHE ILE VAL ASP ARG LEU LYS GLU LEU ILE LYS TYR LYS SEQRES 35 A 541 GLY PHE GLN VAL ALA PRO ALA GLU LEU GLU ALA LEU LEU SEQRES 36 A 541 LEU ASN HIS PRO ASN ILE SER ASP ALA ALA VAL VAL PRO SEQRES 37 A 541 MET LYS ASP GLU GLN ALA GLY GLU VAL PRO VAL ALA PHE SEQRES 38 A 541 VAL VAL ARG SER ASN GLY SER THR ILE THR GLU ASP GLU SEQRES 39 A 541 VAL LYS ASP PHE ILE SER LYS GLN VAL ILE PHE TYR LYS SEQRES 40 A 541 ARG ILE LYS ARG VAL PHE PHE VAL ASP ALA ILE PRO LYS SEQRES 41 A 541 SER PRO SER GLY LYS ILE LEU ARG LYS ASP LEU ARG ALA SEQRES 42 A 541 LYS LEU ALA ALA GLY LEU PRO ASN SEQRES 1 B 541 MET GLU LYS ASP THR LYS GLN VAL ASP ILE ILE PHE ARG SEQRES 2 B 541 SER LYS LEU PRO ASP ILE TYR ILE PRO ASN HIS LEU PRO SEQRES 3 B 541 LEU HIS SER TYR CYS PHE GLU ASN ILE SER GLU PHE SER SEQRES 4 B 541 SER ARG PRO CYS LEU ILE ASN GLY ALA ASN LYS GLN ILE SEQRES 5 B 541 TYR THR TYR ALA ASP VAL GLU LEU ASN SER ARG LYS VAL SEQRES 6 B 541 ALA ALA GLY LEU HIS LYS GLN GLY ILE GLN PRO LYS ASP SEQRES 7 B 541 THR ILE MET ILE LEU LEU PRO ASN SER PRO GLU PHE VAL SEQRES 8 B 541 PHE ALA PHE ILE GLY ALA SER TYR LEU GLY ALA ILE SER SEQRES 9 B 541 THR MET ALA ASN PRO LEU PHE THR PRO ALA GLU VAL VAL SEQRES 10 B 541 LYS GLN ALA LYS ALA SER SER ALA LYS ILE ILE VAL THR SEQRES 11 B 541 GLN ALA CYS HIS VAL ASN LYS VAL LYS ASP TYR ALA PHE SEQRES 12 B 541 GLU ASN ASP VAL LYS ILE ILE CYS ILE ASP SER ALA PRO SEQRES 13 B 541 GLU GLY CYS LEU HIS PHE SER VAL LEU THR GLN ALA ASN SEQRES 14 B 541 GLU HIS ASP ILE PRO GLU VAL GLU ILE GLN PRO ASP ASP SEQRES 15 B 541 VAL VAL ALA LEU PRO TYR SER SER GLY THR THR GLY LEU SEQRES 16 B 541 PRO LYS GLY VAL MET LEU THR HIS LYS GLY LEU VAL THR SEQRES 17 B 541 SER VAL ALA GLN GLN VAL ASP GLY GLU ASN PRO ASN LEU SEQRES 18 B 541 TYR ILE HIS SER GLU ASP VAL MET LEU CYS VAL LEU PRO SEQRES 19 B 541 LEU PHE HIS ILE TYR SER LEU ASN SER VAL LEU LEU CYS SEQRES 20 B 541 GLY LEU ARG VAL GLY ALA ALA ILE LEU ILE MET GLN LYS SEQRES 21 B 541 PHE ASP ILE VAL SER PHE LEU GLU LEU ILE GLN ARG TYR SEQRES 22 B 541 LYS VAL THR ILE GLY PRO PHE VAL PRO PRO ILE VAL LEU SEQRES 23 B 541 ALA ILE ALA LYS SER PRO MET VAL ASP ASP TYR ASP LEU SEQRES 24 B 541 SER SER VAL ARG THR VAL MET SER GLY ALA ALA PRO LEU SEQRES 25 B 541 GLY LYS GLU LEU GLU ASP THR VAL ARG ALA LYS PHE PRO SEQRES 26 B 541 ASN ALA LYS LEU GLY GLN GLY TYR GLY MET THR GLU ALA SEQRES 27 B 541 GLY PRO LEU ALA MET CYS LEU ALA PHE ALA LYS GLU PRO SEQRES 28 B 541 PHE GLU ILE LYS SER GLY ALA CYS GLY THR VAL VAL ARG SEQRES 29 B 541 ASN ALA GLU MET LYS ILE VAL ASP PRO LYS THR GLY ASN SEQRES 30 B 541 SER LEU PRO ARG ASN GLN SER GLY GLU ILE CYS ILE ARG SEQRES 31 B 541 GLY ASP GLN ILE MET LYS GLY TYR LEU ASN ASP PRO GLU SEQRES 32 B 541 ALA THR ALA ARG THR ILE ASP LYS GLU GLY TRP LEU TYR SEQRES 33 B 541 THR GLY ASP ILE GLY TYR ILE ASP ASP ASP ASP GLU LEU SEQRES 34 B 541 PHE ILE VAL ASP ARG LEU LYS GLU LEU ILE LYS TYR LYS SEQRES 35 B 541 GLY PHE GLN VAL ALA PRO ALA GLU LEU GLU ALA LEU LEU SEQRES 36 B 541 LEU ASN HIS PRO ASN ILE SER ASP ALA ALA VAL VAL PRO SEQRES 37 B 541 MET LYS ASP GLU GLN ALA GLY GLU VAL PRO VAL ALA PHE SEQRES 38 B 541 VAL VAL ARG SER ASN GLY SER THR ILE THR GLU ASP GLU SEQRES 39 B 541 VAL LYS ASP PHE ILE SER LYS GLN VAL ILE PHE TYR LYS SEQRES 40 B 541 ARG ILE LYS ARG VAL PHE PHE VAL ASP ALA ILE PRO LYS SEQRES 41 B 541 SER PRO SER GLY LYS ILE LEU ARG LYS ASP LEU ARG ALA SEQRES 42 B 541 LYS LEU ALA ALA GLY LEU PRO ASN HET 4UW A 600 36 HET 4UW B 600 36 HETNAM 4UW 5'-O-[(R)-HYDROXY{[(2E)-3-(5-METHOXY-4-OXOCYCLOHEXA-1, HETNAM 2 4UW 5-DIEN-1-YL)PROP-2-ENOYL]OXY}PHOSPHORYL]ADENOSINE FORMUL 3 4UW 2(C20 H22 N5 O10 P) FORMUL 5 HOH *571(H2 O) HELIX 1 AA1 PRO A 26 PHE A 32 1 7 HELIX 2 AA2 ASN A 34 PHE A 38 5 5 HELIX 3 AA3 TYR A 55 GLN A 72 1 18 HELIX 4 AA4 SER A 87 LEU A 100 1 14 HELIX 5 AA5 THR A 112 SER A 124 1 13 HELIX 6 AA6 ALA A 132 LYS A 137 5 6 HELIX 7 AA7 VAL A 138 ASN A 145 1 8 HELIX 8 AA8 PHE A 162 GLN A 167 1 6 HELIX 9 AA9 HIS A 203 ASP A 215 1 13 HELIX 10 AB1 HIS A 237 VAL A 244 1 8 HELIX 11 AB2 VAL A 244 GLY A 252 1 9 HELIX 12 AB3 ASP A 262 TYR A 273 1 12 HELIX 13 AB4 VAL A 281 SER A 291 1 11 HELIX 14 AB5 PRO A 292 TYR A 297 5 6 HELIX 15 AB6 GLY A 313 ALA A 322 1 10 HELIX 16 AB7 CYS A 344 ALA A 348 5 5 HELIX 17 AB8 ASP A 401 ILE A 409 1 9 HELIX 18 AB9 LYS A 436 LEU A 438 5 3 HELIX 19 AC1 ALA A 447 HIS A 458 1 12 HELIX 20 AC2 THR A 491 LYS A 501 1 11 HELIX 21 AC3 GLN A 502 VAL A 503 5 2 HELIX 22 AC4 ILE A 504 ARG A 508 5 5 HELIX 23 AC5 LEU A 527 LYS A 534 1 8 HELIX 24 AC6 PRO B 26 PHE B 32 1 7 HELIX 25 AC7 ASN B 34 PHE B 38 5 5 HELIX 26 AC8 TYR B 55 GLN B 72 1 18 HELIX 27 AC9 SER B 87 LEU B 100 1 14 HELIX 28 AD1 THR B 112 SER B 124 1 13 HELIX 29 AD2 GLN B 131 CYS B 133 5 3 HELIX 30 AD3 HIS B 134 ASN B 145 1 12 HELIX 31 AD4 PHE B 162 GLN B 167 1 6 HELIX 32 AD5 ASN B 169 ILE B 173 5 5 HELIX 33 AD6 HIS B 203 ASP B 215 1 13 HELIX 34 AD7 HIS B 237 VAL B 244 1 8 HELIX 35 AD8 VAL B 244 GLY B 252 1 9 HELIX 36 AD9 ASP B 262 LYS B 274 1 13 HELIX 37 AE1 VAL B 281 LYS B 290 1 10 HELIX 38 AE2 PRO B 292 TYR B 297 5 6 HELIX 39 AE3 GLY B 313 PHE B 324 1 12 HELIX 40 AE4 LEU B 345 ALA B 348 5 4 HELIX 41 AE5 ASP B 401 ILE B 409 1 9 HELIX 42 AE6 LYS B 436 LEU B 438 5 3 HELIX 43 AE7 ALA B 447 ASN B 457 1 11 HELIX 44 AE8 THR B 491 LYS B 501 1 11 HELIX 45 AE9 GLN B 502 VAL B 503 5 2 HELIX 46 AF1 ILE B 504 ARG B 508 5 5 HELIX 47 AF2 LEU B 527 ALA B 533 1 7 SHEET 1 AA1 4 ILE A 52 THR A 54 0 SHEET 2 AA1 4 PRO A 42 ASN A 46 -1 N CYS A 43 O TYR A 53 SHEET 3 AA1 4 ALA A 254 ILE A 257 1 O ILE A 257 N ILE A 45 SHEET 4 AA1 4 VAL A 228 CYS A 231 1 N CYS A 231 O LEU A 256 SHEET 1 AA2 5 ILE A 103 MET A 106 0 SHEET 2 AA2 5 THR A 79 LEU A 83 1 N ILE A 80 O THR A 105 SHEET 3 AA2 5 ILE A 127 THR A 130 1 O VAL A 129 N LEU A 83 SHEET 4 AA2 5 LYS A 148 CYS A 151 1 O ILE A 150 N ILE A 128 SHEET 5 AA2 5 LEU A 160 HIS A 161 1 O LEU A 160 N ILE A 149 SHEET 1 AA3 3 VAL A 183 ALA A 185 0 SHEET 2 AA3 3 LYS A 197 THR A 202 -1 O LEU A 201 N VAL A 184 SHEET 3 AA3 3 TYR A 188 SER A 189 -1 N SER A 189 O LYS A 197 SHEET 1 AA4 3 VAL A 183 ALA A 185 0 SHEET 2 AA4 3 LYS A 197 THR A 202 -1 O LEU A 201 N VAL A 184 SHEET 3 AA4 3 GLY A 397 TYR A 398 -1 O GLY A 397 N MET A 200 SHEET 1 AA5 3 ILE A 277 PHE A 280 0 SHEET 2 AA5 3 THR A 304 SER A 307 1 O THR A 304 N GLY A 278 SHEET 3 AA5 3 LYS A 328 GLN A 331 1 O LYS A 328 N VAL A 305 SHEET 1 AA6 3 TYR A 333 MET A 335 0 SHEET 2 AA6 3 GLY A 339 MET A 343 -1 O LEU A 341 N TYR A 333 SHEET 3 AA6 3 THR A 361 VAL A 362 -1 O THR A 361 N MET A 343 SHEET 1 AA7 4 GLU A 367 VAL A 371 0 SHEET 2 AA7 4 GLY A 385 ARG A 390 -1 O GLU A 386 N VAL A 371 SHEET 3 AA7 4 LEU A 415 ILE A 423 -1 O LEU A 415 N ILE A 389 SHEET 4 AA7 4 LEU A 429 ARG A 434 -1 O VAL A 432 N ILE A 420 SHEET 1 AA8 2 ILE A 439 TYR A 441 0 SHEET 2 AA8 2 PHE A 444 VAL A 446 -1 O VAL A 446 N ILE A 439 SHEET 1 AA9 3 ILE A 461 ASP A 471 0 SHEET 2 AA9 3 GLY A 475 ARG A 484 -1 O GLY A 475 N ASP A 471 SHEET 3 AA9 3 ARG A 511 PHE A 514 1 O PHE A 513 N ALA A 480 SHEET 1 AB1 4 GLN B 51 THR B 54 0 SHEET 2 AB1 4 PRO B 42 ASN B 46 -1 N CYS B 43 O TYR B 53 SHEET 3 AB1 4 ALA B 254 ILE B 257 1 O ILE B 257 N ILE B 45 SHEET 4 AB1 4 VAL B 228 CYS B 231 1 N CYS B 231 O LEU B 256 SHEET 1 AB2 5 ILE B 103 MET B 106 0 SHEET 2 AB2 5 THR B 79 ILE B 82 1 N ILE B 82 O THR B 105 SHEET 3 AB2 5 ALA B 125 THR B 130 1 O ILE B 127 N MET B 81 SHEET 4 AB2 5 LYS B 148 CYS B 151 1 O ILE B 150 N ILE B 128 SHEET 5 AB2 5 CYS B 159 HIS B 161 1 O LEU B 160 N CYS B 151 SHEET 1 AB3 3 VAL B 183 ALA B 185 0 SHEET 2 AB3 3 LYS B 197 THR B 202 -1 O LEU B 201 N VAL B 184 SHEET 3 AB3 3 TYR B 188 SER B 189 -1 N SER B 189 O LYS B 197 SHEET 1 AB4 3 VAL B 183 ALA B 185 0 SHEET 2 AB4 3 LYS B 197 THR B 202 -1 O LEU B 201 N VAL B 184 SHEET 3 AB4 3 GLY B 397 TYR B 398 -1 O GLY B 397 N MET B 200 SHEET 1 AB5 5 ILE B 277 PHE B 280 0 SHEET 2 AB5 5 THR B 304 SER B 307 1 O THR B 304 N GLY B 278 SHEET 3 AB5 5 LYS B 328 MET B 335 1 O LYS B 328 N VAL B 305 SHEET 4 AB5 5 GLY B 339 MET B 343 -1 O ALA B 342 N TYR B 333 SHEET 5 AB5 5 THR B 361 VAL B 362 -1 O THR B 361 N MET B 343 SHEET 1 AB6 4 GLU B 367 VAL B 371 0 SHEET 2 AB6 4 GLY B 385 ARG B 390 -1 O GLU B 386 N VAL B 371 SHEET 3 AB6 4 LEU B 415 ILE B 423 -1 O LEU B 415 N ILE B 389 SHEET 4 AB6 4 LEU B 429 ARG B 434 -1 O VAL B 432 N ILE B 420 SHEET 1 AB7 2 ILE B 439 TYR B 441 0 SHEET 2 AB7 2 PHE B 444 VAL B 446 -1 O VAL B 446 N ILE B 439 SHEET 1 AB8 3 ILE B 461 ASP B 471 0 SHEET 2 AB8 3 GLY B 475 ARG B 484 -1 O VAL B 483 N SER B 462 SHEET 3 AB8 3 ARG B 511 PHE B 514 1 O PHE B 513 N ALA B 480 SITE 1 AC1 21 SER A 189 HIS A 237 ILE A 238 TYR A 239 SITE 2 AC1 21 SER A 243 ALA A 309 ALA A 310 PRO A 311 SITE 3 AC1 21 GLN A 331 GLY A 332 TYR A 333 GLY A 334 SITE 4 AC1 21 MET A 335 THR A 336 PRO A 340 MET A 343 SITE 5 AC1 21 ASP A 419 ARG A 434 LYS A 525 HOH A 744 SITE 6 AC1 21 HOH A 855 SITE 1 AC2 23 SER B 189 HIS B 237 ILE B 238 TYR B 239 SITE 2 AC2 23 SER B 243 ALA B 309 ALA B 310 PRO B 311 SITE 3 AC2 23 GLN B 331 GLY B 332 TYR B 333 GLY B 334 SITE 4 AC2 23 MET B 335 THR B 336 PRO B 340 MET B 343 SITE 5 AC2 23 ASP B 419 ARG B 434 LYS B 525 HOH B 736 SITE 6 AC2 23 HOH B 741 HOH B 754 HOH B 848 CRYST1 93.276 97.186 124.793 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010721 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010290 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008013 0.00000