HEADER HYDROLASE 03-JUN-15 5BU6 TITLE STRUCTURE OF BPSB DEACEYLASE DOMAIN FROM BORDETELLA BRONCHISEPTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BPSB (PGAB), POLY-BETA-1,6-N-ACETYL-D-GLUCOSAMINE N- COMPND 3 DEACETYLASE; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 35-307; COMPND 6 EC: 3.5.1.33; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA BRONCHISEPTICA RB50; SOURCE 3 ORGANISM_TAXID: 257310; SOURCE 4 STRAIN: RB50; SOURCE 5 GENE: HMSF, BN113_1689, BB1768; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS DEACETYLASE, FAMILY 4 CARBOHYDRATE ESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.J.LITTLE,N.C.BAMFORD,P.L.HOWELL REVDAT 5 27-SEP-23 5BU6 1 LINK REVDAT 4 08-JAN-20 5BU6 1 JRNL REMARK REVDAT 3 23-SEP-15 5BU6 1 JRNL REVDAT 2 05-AUG-15 5BU6 1 JRNL REVDAT 1 29-JUL-15 5BU6 0 JRNL AUTH D.J.LITTLE,S.MILEK,N.C.BAMFORD,T.GANGULY,B.R.DIFRANCESCO, JRNL AUTH 2 M.NITZ,R.DEORA,P.L.HOWELL JRNL TITL THE PROTEIN BPSB IS A POLY-BETA-1,6-N-ACETYL-D-GLUCOSAMINE JRNL TITL 2 DEACETYLASE REQUIRED FOR BIOFILM FORMATION IN BORDETELLA JRNL TITL 3 BRONCHISEPTICA. JRNL REF J.BIOL.CHEM. V. 290 22827 2015 JRNL REFN ESSN 1083-351X JRNL PMID 26203190 JRNL DOI 10.1074/JBC.M115.672469 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1760 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 38470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.6120 - 4.7008 0.98 2684 145 0.1436 0.1698 REMARK 3 2 4.7008 - 3.7317 0.99 2645 148 0.1391 0.1694 REMARK 3 3 3.7317 - 3.2601 0.99 2635 147 0.1679 0.2259 REMARK 3 4 3.2601 - 2.9621 0.99 2602 147 0.1872 0.2063 REMARK 3 5 2.9621 - 2.7498 0.99 2650 141 0.2054 0.2863 REMARK 3 6 2.7498 - 2.5877 0.99 2618 139 0.2019 0.2390 REMARK 3 7 2.5877 - 2.4581 0.99 2625 147 0.1957 0.2434 REMARK 3 8 2.4581 - 2.3511 0.99 2613 144 0.1896 0.2408 REMARK 3 9 2.3511 - 2.2606 0.99 2594 141 0.1954 0.2290 REMARK 3 10 2.2606 - 2.1826 0.98 2582 142 0.1969 0.2601 REMARK 3 11 2.1826 - 2.1144 0.98 2610 138 0.1956 0.2470 REMARK 3 12 2.1144 - 2.0539 0.98 2597 145 0.2019 0.2475 REMARK 3 13 2.0539 - 1.9999 0.98 2581 141 0.2078 0.2278 REMARK 3 14 1.9999 - 1.9511 0.93 2436 133 0.2259 0.2640 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4257 REMARK 3 ANGLE : 1.058 5808 REMARK 3 CHIRALITY : 0.044 650 REMARK 3 PLANARITY : 0.006 767 REMARK 3 DIHEDRAL : 13.640 1546 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 110.3299 -13.2542 156.4765 REMARK 3 T TENSOR REMARK 3 T11: 0.5161 T22: 0.5331 REMARK 3 T33: 0.3114 T12: 0.0274 REMARK 3 T13: -0.0397 T23: -0.0811 REMARK 3 L TENSOR REMARK 3 L11: 4.4908 L22: 7.9794 REMARK 3 L33: 1.7703 L12: 1.5024 REMARK 3 L13: -0.5110 L23: 3.0091 REMARK 3 S TENSOR REMARK 3 S11: -0.0480 S12: -0.2507 S13: 0.5962 REMARK 3 S21: 0.0954 S22: -0.3114 S23: 0.6326 REMARK 3 S31: -0.5700 S32: -0.2624 S33: 0.2729 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): 117.1937 -15.7115 144.6873 REMARK 3 T TENSOR REMARK 3 T11: 0.2466 T22: 0.2528 REMARK 3 T33: 0.2832 T12: -0.0136 REMARK 3 T13: 0.0043 T23: -0.0457 REMARK 3 L TENSOR REMARK 3 L11: 2.0132 L22: 3.0456 REMARK 3 L33: 3.3773 L12: -0.1727 REMARK 3 L13: 0.3534 L23: -1.1645 REMARK 3 S TENSOR REMARK 3 S11: 0.0263 S12: -0.0776 S13: -0.0186 REMARK 3 S21: 0.0608 S22: -0.0940 S23: -0.0622 REMARK 3 S31: -0.1156 S32: 0.1163 S33: 0.0962 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.8272 -8.8703 139.5016 REMARK 3 T TENSOR REMARK 3 T11: 0.4517 T22: 0.8382 REMARK 3 T33: 1.1045 T12: 0.1299 REMARK 3 T13: 0.0544 T23: 0.1915 REMARK 3 L TENSOR REMARK 3 L11: 5.7303 L22: 3.7869 REMARK 3 L33: 3.1476 L12: -1.4032 REMARK 3 L13: 0.8896 L23: -0.2912 REMARK 3 S TENSOR REMARK 3 S11: 0.2157 S12: 0.2778 S13: 0.4618 REMARK 3 S21: 0.3061 S22: 0.3184 S23: 0.2251 REMARK 3 S31: -0.4330 S32: -0.9435 S33: -0.4919 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 219 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): 104.5127 -21.1721 143.0683 REMARK 3 T TENSOR REMARK 3 T11: 0.2777 T22: 0.2568 REMARK 3 T33: 0.3091 T12: -0.0010 REMARK 3 T13: -0.0045 T23: -0.0297 REMARK 3 L TENSOR REMARK 3 L11: 2.8610 L22: 2.2102 REMARK 3 L33: 3.7462 L12: 0.0222 REMARK 3 L13: -0.0913 L23: -1.1605 REMARK 3 S TENSOR REMARK 3 S11: -0.0507 S12: -0.1117 S13: -0.1208 REMARK 3 S21: -0.0326 S22: -0.0049 S23: 0.3451 REMARK 3 S31: 0.1897 S32: -0.4367 S33: 0.0367 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 35 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 101.2462 0.1754 167.9185 REMARK 3 T TENSOR REMARK 3 T11: 0.5176 T22: 0.5383 REMARK 3 T33: 0.4737 T12: -0.0544 REMARK 3 T13: -0.0186 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 8.5116 L22: 2.9379 REMARK 3 L33: 6.1871 L12: -4.8220 REMARK 3 L13: 1.7247 L23: -1.6342 REMARK 3 S TENSOR REMARK 3 S11: 0.1795 S12: 0.5787 S13: 0.7624 REMARK 3 S21: -0.3642 S22: -0.2681 S23: -1.0514 REMARK 3 S31: -0.3361 S32: 0.5651 S33: 0.2347 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 109.7257 -11.4263 172.1638 REMARK 3 T TENSOR REMARK 3 T11: 0.5003 T22: 0.8284 REMARK 3 T33: 0.8160 T12: 0.0048 REMARK 3 T13: 0.0610 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 4.1909 L22: 5.4662 REMARK 3 L33: 4.6873 L12: -1.4187 REMARK 3 L13: -0.9177 L23: 0.2895 REMARK 3 S TENSOR REMARK 3 S11: -0.2587 S12: 0.2531 S13: -0.7436 REMARK 3 S21: -0.2401 S22: 0.2372 S23: -0.4790 REMARK 3 S31: 0.4792 S32: 0.2736 S33: -0.0264 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 84 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): 99.3684 -6.9833 183.2807 REMARK 3 T TENSOR REMARK 3 T11: 0.2613 T22: 0.3446 REMARK 3 T33: 0.2818 T12: 0.0243 REMARK 3 T13: -0.0017 T23: -0.0416 REMARK 3 L TENSOR REMARK 3 L11: 2.6663 L22: 3.1209 REMARK 3 L33: 4.2194 L12: 0.3539 REMARK 3 L13: -0.3960 L23: -1.1645 REMARK 3 S TENSOR REMARK 3 S11: -0.0067 S12: -0.0163 S13: 0.0972 REMARK 3 S21: 0.0843 S22: -0.0441 S23: -0.3634 REMARK 3 S31: -0.0951 S32: 0.3675 S33: 0.0473 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 191 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.4883 -14.6537 175.1877 REMARK 3 T TENSOR REMARK 3 T11: 0.3072 T22: 0.3560 REMARK 3 T33: 0.2690 T12: 0.0220 REMARK 3 T13: 0.0249 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.8920 L22: 3.3634 REMARK 3 L33: 2.0909 L12: 0.6024 REMARK 3 L13: 0.5744 L23: -0.0221 REMARK 3 S TENSOR REMARK 3 S11: -0.0851 S12: 0.3361 S13: -0.0790 REMARK 3 S21: -0.2425 S22: 0.0589 S23: 0.0803 REMARK 3 S31: 0.1416 S32: -0.0060 S33: 0.0157 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BU6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210430. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : DCM WITH CRYO-COOLED 1ST CRYSTAL REMARK 200 SAGITTALLY BENT 2ND CRYSTAL REMARK 200 FOLLOWED BY VERTICALLY FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39033 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.54600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4F9D REMARK 200 REMARK 200 REMARK: SMALL THIN NEEDLES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 2000 MME, 0.1 M POTASSIUM REMARK 280 THIOCYANATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.89250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -81.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 23.75136 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -73.09915 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 31 REMARK 465 SER A 32 REMARK 465 HIS A 33 REMARK 465 MET A 34 REMARK 465 VAL A 299 REMARK 465 ALA A 300 REMARK 465 THR A 301 REMARK 465 VAL A 302 REMARK 465 ALA A 303 REMARK 465 ARG A 304 REMARK 465 ALA A 305 REMARK 465 MET A 306 REMARK 465 ARG A 307 REMARK 465 GLY B 31 REMARK 465 SER B 32 REMARK 465 HIS B 33 REMARK 465 MET B 34 REMARK 465 VAL B 299 REMARK 465 ALA B 300 REMARK 465 THR B 301 REMARK 465 VAL B 302 REMARK 465 ALA B 303 REMARK 465 ARG B 304 REMARK 465 ALA B 305 REMARK 465 MET B 306 REMARK 465 ARG B 307 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 52 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 56 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 71 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 ARG B 56 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 71 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 53 60.20 -105.60 REMARK 500 ASN A 54 12.23 -69.52 REMARK 500 ASP A 61 77.51 -114.81 REMARK 500 ASP A 114 -21.07 101.76 REMARK 500 SER A 185 168.77 79.41 REMARK 500 TYR A 252 15.34 59.25 REMARK 500 LEU A 268 76.75 -103.19 REMARK 500 LEU B 41 -42.68 -135.02 REMARK 500 ASN B 54 26.08 -72.93 REMARK 500 GLN B 65 44.20 -96.42 REMARK 500 ALA B 67 -13.04 66.91 REMARK 500 ARG B 106 57.03 39.04 REMARK 500 ASP B 114 -18.36 101.36 REMARK 500 SER B 185 166.31 80.47 REMARK 500 ASN B 187 42.25 -144.37 REMARK 500 HIS B 189 57.75 -91.87 REMARK 500 LEU B 268 79.33 -103.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 114 OD1 REMARK 620 2 HIS A 184 NE2 91.2 REMARK 620 3 HIS A 189 NE2 93.2 93.1 REMARK 620 4 SCN A 404 S 172.3 87.7 94.5 REMARK 620 5 HOH A 502 O 89.6 173.6 93.2 90.7 REMARK 620 6 HOH A 522 O 84.8 91.9 174.7 87.6 81.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 403 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 240 NE2 REMARK 620 2 SCN A 405 S 89.3 REMARK 620 3 SCN A 407 S 92.1 156.4 REMARK 620 4 HIS B 240 NE2 45.9 66.5 98.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 114 OD1 REMARK 620 2 HIS B 184 NE2 88.6 REMARK 620 3 HIS B 189 NE2 95.5 95.7 REMARK 620 4 SCN B 403 S 171.8 91.7 92.7 REMARK 620 5 HOH B 502 O 88.9 172.2 91.9 89.7 REMARK 620 6 HOH B 532 O 85.3 92.2 172.1 86.6 80.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN B 403 DBREF1 5BU6 A 35 307 UNP A0A0E1QQI1_BORBO DBREF2 5BU6 A A0A0E1QQI1 35 307 DBREF1 5BU6 B 35 307 UNP A0A0E1QQI1_BORBO DBREF2 5BU6 B A0A0E1QQI1 35 307 SEQADV 5BU6 GLY A 31 UNP A0A0E1QQI EXPRESSION TAG SEQADV 5BU6 SER A 32 UNP A0A0E1QQI EXPRESSION TAG SEQADV 5BU6 HIS A 33 UNP A0A0E1QQI EXPRESSION TAG SEQADV 5BU6 MET A 34 UNP A0A0E1QQI EXPRESSION TAG SEQADV 5BU6 SER A 47 UNP A0A0E1QQI CYS 47 ENGINEERED MUTATION SEQADV 5BU6 ALA A 128 UNP A0A0E1QQI LYS 128 ENGINEERED MUTATION SEQADV 5BU6 ALA A 129 UNP A0A0E1QQI LYS 129 ENGINEERED MUTATION SEQADV 5BU6 HIS A 235 UNP A0A0E1QQI ASP 235 ENGINEERED MUTATION SEQADV 5BU6 HIS A 239 UNP A0A0E1QQI GLU 239 ENGINEERED MUTATION SEQADV 5BU6 GLY B 31 UNP A0A0E1QQI EXPRESSION TAG SEQADV 5BU6 SER B 32 UNP A0A0E1QQI EXPRESSION TAG SEQADV 5BU6 HIS B 33 UNP A0A0E1QQI EXPRESSION TAG SEQADV 5BU6 MET B 34 UNP A0A0E1QQI EXPRESSION TAG SEQADV 5BU6 SER B 47 UNP A0A0E1QQI CYS 47 ENGINEERED MUTATION SEQADV 5BU6 ALA B 128 UNP A0A0E1QQI LYS 128 ENGINEERED MUTATION SEQADV 5BU6 ALA B 129 UNP A0A0E1QQI LYS 129 ENGINEERED MUTATION SEQADV 5BU6 HIS B 235 UNP A0A0E1QQI ASP 235 ENGINEERED MUTATION SEQADV 5BU6 HIS B 239 UNP A0A0E1QQI GLU 239 ENGINEERED MUTATION SEQRES 1 A 277 GLY SER HIS MET PRO ASP PRO ASP ASP GLY LEU THR PHE SEQRES 2 A 277 ARG VAL LEU SER MET HIS ASP VAL ARG ASP ASN LEU ARG SEQRES 3 A 277 ALA SER PHE ALA ASP MET PRO ASP GLN PHE ALA ILE GLU SEQRES 4 A 277 THR ARG THR LEU THR ASP LEU PHE GLU TRP ILE ARG VAL SEQRES 5 A 277 LYS GLY PHE ASN PRO ILE SER MET GLN GLN ILE ILE ASP SEQRES 6 A 277 SER ARG ALA GLY VAL ARG PRO LEU PRO PRO ARG PRO ILE SEQRES 7 A 277 LEU LEU THR PHE ASP ASP GLY TYR ALA SER THR TYR THR SEQRES 8 A 277 LYS VAL PHE PRO LEU LEU ALA ALA PHE ASN TYR PRO ALA SEQRES 9 A 277 VAL VAL ALA VAL VAL THR SER TRP THR ASP ALA PRO ALA SEQRES 10 A 277 GLY THR LYS ILE ARG LEU SER PRO LYS ILE GLU VAL PRO SEQRES 11 A 277 HIS ASP PHE PHE MET THR TRP ALA GLN LEU ARG GLU MET SEQRES 12 A 277 ALA GLN SER GLY LEU VAL GLU LEU ALA SER HIS SER HIS SEQRES 13 A 277 ASN LEU HIS ARG GLY VAL LEU ALA ASN PRO GLN GLY ASN SEQRES 14 A 277 GLU GLN PRO ALA ALA SER SER ARG GLN TYR LEU PRO ALA SEQRES 15 A 277 SER GLY ARG TYR GLU ASN ASP ALA GLU TYR ARG ALA ARG SEQRES 16 A 277 VAL ARG GLN ASP LEU LYS THR SER ALA HIS LEU ILE ARG SEQRES 17 A 277 HIS HIS THR GLY VAL THR ILE ARG SER ILE VAL TRP PRO SEQRES 18 A 277 TYR GLY ALA HIS ASN ARG ASP THR ASP GLN VAL ALA ALA SEQRES 19 A 277 GLU VAL GLY LEU ASN ILE GLY LEU THR LEU GLN PRO GLY SEQRES 20 A 277 PRO ASN THR PRO ASP VAL ALA LEU THR GLN ILE ARG ARG SEQRES 21 A 277 SER LEU VAL ASP TYR GLU VAL ASN VAL ALA THR VAL ALA SEQRES 22 A 277 ARG ALA MET ARG SEQRES 1 B 277 GLY SER HIS MET PRO ASP PRO ASP ASP GLY LEU THR PHE SEQRES 2 B 277 ARG VAL LEU SER MET HIS ASP VAL ARG ASP ASN LEU ARG SEQRES 3 B 277 ALA SER PHE ALA ASP MET PRO ASP GLN PHE ALA ILE GLU SEQRES 4 B 277 THR ARG THR LEU THR ASP LEU PHE GLU TRP ILE ARG VAL SEQRES 5 B 277 LYS GLY PHE ASN PRO ILE SER MET GLN GLN ILE ILE ASP SEQRES 6 B 277 SER ARG ALA GLY VAL ARG PRO LEU PRO PRO ARG PRO ILE SEQRES 7 B 277 LEU LEU THR PHE ASP ASP GLY TYR ALA SER THR TYR THR SEQRES 8 B 277 LYS VAL PHE PRO LEU LEU ALA ALA PHE ASN TYR PRO ALA SEQRES 9 B 277 VAL VAL ALA VAL VAL THR SER TRP THR ASP ALA PRO ALA SEQRES 10 B 277 GLY THR LYS ILE ARG LEU SER PRO LYS ILE GLU VAL PRO SEQRES 11 B 277 HIS ASP PHE PHE MET THR TRP ALA GLN LEU ARG GLU MET SEQRES 12 B 277 ALA GLN SER GLY LEU VAL GLU LEU ALA SER HIS SER HIS SEQRES 13 B 277 ASN LEU HIS ARG GLY VAL LEU ALA ASN PRO GLN GLY ASN SEQRES 14 B 277 GLU GLN PRO ALA ALA SER SER ARG GLN TYR LEU PRO ALA SEQRES 15 B 277 SER GLY ARG TYR GLU ASN ASP ALA GLU TYR ARG ALA ARG SEQRES 16 B 277 VAL ARG GLN ASP LEU LYS THR SER ALA HIS LEU ILE ARG SEQRES 17 B 277 HIS HIS THR GLY VAL THR ILE ARG SER ILE VAL TRP PRO SEQRES 18 B 277 TYR GLY ALA HIS ASN ARG ASP THR ASP GLN VAL ALA ALA SEQRES 19 B 277 GLU VAL GLY LEU ASN ILE GLY LEU THR LEU GLN PRO GLY SEQRES 20 B 277 PRO ASN THR PRO ASP VAL ALA LEU THR GLN ILE ARG ARG SEQRES 21 B 277 SER LEU VAL ASP TYR GLU VAL ASN VAL ALA THR VAL ALA SEQRES 22 B 277 ARG ALA MET ARG HET NI A 401 1 HET NI A 402 1 HET NI A 403 1 HET SCN A 404 3 HET SCN A 405 3 HET SCN A 406 3 HET SCN A 407 3 HET EDO A 408 4 HET NI B 401 1 HET NI B 402 1 HET SCN B 403 3 HETNAM NI NICKEL (II) ION HETNAM SCN THIOCYANATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NI 5(NI 2+) FORMUL 6 SCN 5(C N S 1-) FORMUL 10 EDO C2 H6 O2 FORMUL 14 HOH *125(H2 O) HELIX 1 AA1 LEU A 73 LYS A 83 1 11 HELIX 2 AA2 SER A 89 ALA A 98 1 10 HELIX 3 AA3 ALA A 117 LYS A 122 1 6 HELIX 4 AA4 LYS A 122 ASN A 131 1 10 HELIX 5 AA5 VAL A 139 ASP A 144 1 6 HELIX 6 AA6 PRO A 160 PHE A 164 5 5 HELIX 7 AA7 THR A 166 SER A 176 1 11 HELIX 8 AA8 ASN A 218 GLY A 242 1 25 HELIX 9 AA9 PRO A 251 ALA A 254 5 4 HELIX 10 AB1 ASN A 256 VAL A 266 1 11 HELIX 11 AB2 ALA A 284 ILE A 288 5 5 HELIX 12 AB3 LEU B 73 GLY B 84 1 12 HELIX 13 AB4 SER B 89 ALA B 98 1 10 HELIX 14 AB5 ALA B 117 LYS B 122 1 6 HELIX 15 AB6 LYS B 122 ASN B 131 1 10 HELIX 16 AB7 VAL B 139 ASP B 144 1 6 HELIX 17 AB8 PRO B 160 PHE B 164 5 5 HELIX 18 AB9 THR B 166 SER B 176 1 11 HELIX 19 AC1 ASN B 218 GLY B 242 1 25 HELIX 20 AC2 PRO B 251 ALA B 254 5 4 HELIX 21 AC3 ASN B 256 VAL B 266 1 11 HELIX 22 AC4 ALA B 284 ILE B 288 5 5 SHEET 1 AA1 5 ARG A 71 THR A 72 0 SHEET 2 AA1 5 SER A 291 GLU A 296 1 O GLU A 296 N ARG A 71 SHEET 3 AA1 5 ARG A 44 ASP A 50 1 N SER A 47 O SER A 291 SHEET 4 AA1 5 PRO A 107 ASP A 113 1 O LEU A 109 N LEU A 46 SHEET 5 AA1 5 ASN A 86 PRO A 87 1 N ASN A 86 O ILE A 108 SHEET 1 AA2 6 ARG A 71 THR A 72 0 SHEET 2 AA2 6 SER A 291 GLU A 296 1 O GLU A 296 N ARG A 71 SHEET 3 AA2 6 ARG A 44 ASP A 50 1 N SER A 47 O SER A 291 SHEET 4 AA2 6 PRO A 107 ASP A 113 1 O LEU A 109 N LEU A 46 SHEET 5 AA2 6 ALA A 134 VAL A 138 1 O VAL A 135 N PHE A 112 SHEET 6 AA2 6 VAL A 179 SER A 183 1 O GLU A 180 N VAL A 136 SHEET 1 AA3 2 ILE A 151 SER A 154 0 SHEET 2 AA3 2 ILE A 157 VAL A 159 -1 O VAL A 159 N ILE A 151 SHEET 1 AA4 2 GLY A 191 LEU A 193 0 SHEET 2 AA4 2 GLU A 200 PRO A 202 -1 O GLN A 201 N VAL A 192 SHEET 1 AA5 2 TYR A 209 LEU A 210 0 SHEET 2 AA5 2 ARG A 215 TYR A 216 -1 O ARG A 215 N LEU A 210 SHEET 1 AA6 2 SER A 247 VAL A 249 0 SHEET 2 AA6 2 ILE A 270 LEU A 272 1 O LEU A 272 N ILE A 248 SHEET 1 AA7 5 ARG B 71 THR B 72 0 SHEET 2 AA7 5 SER B 291 GLU B 296 1 O GLU B 296 N ARG B 71 SHEET 3 AA7 5 ARG B 44 ASP B 50 1 N SER B 47 O SER B 291 SHEET 4 AA7 5 PRO B 107 ASP B 113 1 O THR B 111 N MET B 48 SHEET 5 AA7 5 ASN B 86 PRO B 87 1 N ASN B 86 O ILE B 108 SHEET 1 AA8 6 ARG B 71 THR B 72 0 SHEET 2 AA8 6 SER B 291 GLU B 296 1 O GLU B 296 N ARG B 71 SHEET 3 AA8 6 ARG B 44 ASP B 50 1 N SER B 47 O SER B 291 SHEET 4 AA8 6 PRO B 107 ASP B 113 1 O THR B 111 N MET B 48 SHEET 5 AA8 6 ALA B 134 VAL B 138 1 O VAL B 135 N LEU B 110 SHEET 6 AA8 6 VAL B 179 SER B 183 1 O GLU B 180 N ALA B 134 SHEET 1 AA9 2 ILE B 151 ARG B 152 0 SHEET 2 AA9 2 GLU B 158 VAL B 159 -1 O VAL B 159 N ILE B 151 SHEET 1 AB1 2 GLY B 191 LEU B 193 0 SHEET 2 AB1 2 GLU B 200 PRO B 202 -1 O GLN B 201 N VAL B 192 SHEET 1 AB2 2 SER B 247 VAL B 249 0 SHEET 2 AB2 2 ILE B 270 LEU B 272 1 O LEU B 272 N ILE B 248 LINK OD1 ASP A 114 NI NI A 401 1555 1555 2.10 LINK NE2 HIS A 184 NI NI A 401 1555 1555 2.20 LINK NE2 HIS A 189 NI NI A 401 1555 1555 2.08 LINK NE2 HIS A 240 NI NI A 403 1555 1555 2.18 LINK NI NI A 401 S SCN A 404 1555 1555 2.14 LINK NI NI A 401 O HOH A 502 1555 1555 2.17 LINK NI NI A 401 O HOH A 522 1555 1555 2.13 LINK NI NI A 403 S SCN A 405 1555 1555 2.10 LINK NI NI A 403 S SCN A 407 1555 1555 2.14 LINK NI NI A 403 NE2 HIS B 240 1556 1555 2.11 LINK OD1 ASP B 114 NI NI B 401 1555 1555 2.18 LINK NE2 HIS B 184 NI NI B 401 1555 1555 2.16 LINK NE2 HIS B 189 NI NI B 401 1555 1555 2.07 LINK ND1 HIS B 239 NI NI B 402 1555 1555 2.65 LINK NI NI B 401 S SCN B 403 1555 1555 2.22 LINK NI NI B 401 O HOH B 502 1555 1555 2.29 LINK NI NI B 401 O HOH B 532 1555 1555 2.01 SITE 1 AC1 6 ASP A 114 HIS A 184 HIS A 189 SCN A 404 SITE 2 AC1 6 HOH A 502 HOH A 522 SITE 1 AC2 3 HIS A 235 HIS A 239 SCN A 406 SITE 1 AC3 4 HIS A 240 SCN A 405 SCN A 407 HIS B 240 SITE 1 AC4 8 HIS A 184 HIS A 189 TYR A 252 LEU A 274 SITE 2 AC4 8 ARG A 290 NI A 401 HOH A 502 HOH A 522 SITE 1 AC5 6 ASP A 144 HIS A 240 NI A 403 SCN A 406 SITE 2 AC5 6 HIS B 239 HIS B 240 SITE 1 AC6 5 HIS A 235 HIS A 239 NI A 402 SCN A 405 SITE 2 AC6 5 ASP B 144 SITE 1 AC7 3 HIS A 240 NI A 403 HIS B 240 SITE 1 AC8 6 SER A 89 MET A 90 GLN A 91 LEU A 178 SITE 2 AC8 6 GLU A 180 HOH A 554 SITE 1 AC9 6 ASP B 114 HIS B 184 HIS B 189 SCN B 403 SITE 2 AC9 6 HOH B 502 HOH B 532 SITE 1 AD1 2 HIS B 235 HIS B 239 SITE 1 AD2 7 HIS B 184 HIS B 189 TYR B 252 LEU B 274 SITE 2 AD2 7 ARG B 290 NI B 401 HOH B 532 CRYST1 47.947 77.785 76.861 90.00 108.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020856 0.000000 0.006778 0.00000 SCALE2 0.000000 0.012856 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013680 0.00000