HEADER TRANSFERASE 05-JUN-15 5BVC TITLE CRYSTAL STRUCTURE OF LIPOMYCES STARKEYI LEVOGLUCOSAN KINASE BOUND TO TITLE 2 ADP, MAGNESIUM AND LEVOGLUCOSAN IN AN ALTERNATE ORIENTATION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEVOGLUCOSAN KINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LIPOMYCES STARKEYI; SOURCE 3 ORGANISM_COMMON: OLEAGINOUS YEAST; SOURCE 4 ORGANISM_TAXID: 29829; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SUGAR KINASE, ATP-BINDING, CARBOHYDRATE METABOLISM, LEVOGLUCOSAN, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.P.BACIK REVDAT 6 27-SEP-23 5BVC 1 REMARK REVDAT 5 04-DEC-19 5BVC 1 REMARK REVDAT 4 13-SEP-17 5BVC 1 JRNL REMARK REVDAT 3 11-NOV-15 5BVC 1 JRNL REVDAT 2 23-SEP-15 5BVC 1 JRNL REVDAT 1 16-SEP-15 5BVC 0 JRNL AUTH J.P.BACIK,J.R.KLESMITH,T.A.WHITEHEAD,L.R.JARBOE,C.J.UNKEFER, JRNL AUTH 2 B.L.MARK,R.MICHALCZYK JRNL TITL PRODUCING GLUCOSE 6-PHOSPHATE FROM CELLULOSIC BIOMASS: JRNL TITL 2 STRUCTURAL INSIGHTS INTO LEVOGLUCOSAN BIOCONVERSION. JRNL REF J.BIOL.CHEM. V. 290 26638 2015 JRNL REFN ESSN 1083-351X JRNL PMID 26354439 JRNL DOI 10.1074/JBC.M115.674614 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 44796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2271 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.2758 - 5.0373 0.95 2858 149 0.2003 0.1993 REMARK 3 2 5.0373 - 3.9991 0.94 2662 134 0.1657 0.1866 REMARK 3 3 3.9991 - 3.4939 0.96 2646 139 0.1643 0.1925 REMARK 3 4 3.4939 - 3.1745 0.97 2642 161 0.1863 0.2330 REMARK 3 5 3.1745 - 2.9470 0.97 2661 137 0.1904 0.2253 REMARK 3 6 2.9470 - 2.7733 0.97 2664 128 0.1985 0.2235 REMARK 3 7 2.7733 - 2.6345 0.98 2638 143 0.2067 0.2336 REMARK 3 8 2.6345 - 2.5198 0.98 2645 135 0.2030 0.2442 REMARK 3 9 2.5198 - 2.4228 0.98 2619 136 0.2293 0.2849 REMARK 3 10 2.4228 - 2.3392 0.98 2648 151 0.2245 0.2825 REMARK 3 11 2.3392 - 2.2661 0.98 2603 145 0.2433 0.2608 REMARK 3 12 2.2661 - 2.2013 0.98 2635 142 0.2844 0.2884 REMARK 3 13 2.2013 - 2.1433 0.99 2679 122 0.2456 0.3322 REMARK 3 14 2.1433 - 2.0910 0.99 2614 178 0.2720 0.2968 REMARK 3 15 2.0910 - 2.0435 0.99 2649 142 0.3135 0.3215 REMARK 3 16 2.0435 - 2.0000 1.00 2662 129 0.3050 0.3213 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3390 REMARK 3 ANGLE : 1.117 4618 REMARK 3 CHIRALITY : 0.074 521 REMARK 3 PLANARITY : 0.005 619 REMARK 3 DIHEDRAL : 14.281 1236 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BVC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210590. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12709 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44939 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 43.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.59200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4YH5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: EQUAL AMOUNTS OF LGK (25 MG/ML) IN REMARK 280 CRYSTALLIZATION BUFFER (100 MM NACL, 0.5 MM TCEP, 20 MM TRIS PH REMARK 280 7.5, 2 MM ADP, 4 MM MGCL, 1 MM ALUMINUM NITRATE AND 10 MM SODIUM REMARK 280 FLUORIDE) AND CRYSTALLIZATION BUFFER (1.3 M SODIUM MALONATE, REMARK 280 0.093 M BIS-TRIS PROPANE PH 7.0) WERE MIXED AND AND A RESULTANT REMARK 280 CRYSTAL WAS SOAKED WITH 200 MM LEVOGLUCOSAN., VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 132.09500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.12500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.12500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.04750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.12500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.12500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 198.14250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.12500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.12500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 66.04750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.12500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.12500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 198.14250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 132.09500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 264.19000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ILE A 3 REMARK 465 ALA A 4 REMARK 465 THR A 5 REMARK 465 SER A 6 REMARK 465 THR A 7 REMARK 465 GLY A 8 REMARK 465 ASP A 9 REMARK 465 HIS A 443 REMARK 465 HIS A 444 REMARK 465 HIS A 445 REMARK 465 HIS A 446 REMARK 465 HIS A 447 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 ARG A 66 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 78 CG CD1 CD2 REMARK 470 ARG A 203 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 225 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 226 CG ND1 CD2 CE1 NE2 REMARK 470 ASN A 229 CG OD1 ND2 REMARK 470 GLU A 231 CG CD OE1 OE2 REMARK 470 LYS A 236 CG CD CE NZ REMARK 470 LYS A 242 CG CD CE NZ REMARK 470 LYS A 245 CG CD CE NZ REMARK 470 GLU A 249 CG CD OE1 OE2 REMARK 470 ARG A 283 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 290 CG CD1 CD2 REMARK 470 ASP A 294 CG OD1 OD2 REMARK 470 GLN A 341 CG CD OE1 NE2 REMARK 470 LYS A 408 CG CD CE NZ REMARK 470 LYS A 432 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 654 O HOH A 790 2.12 REMARK 500 OG1 THR A 73 OE2 GLU A 77 2.19 REMARK 500 O ARG A 312 O HOH A 601 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 73 -148.64 -171.88 REMARK 500 ALA A 135 93.34 169.79 REMARK 500 ASP A 237 10.60 58.56 REMARK 500 ASN A 436 23.18 -142.79 REMARK 500 ASN A 437 44.00 -93.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 26 OD2 REMARK 620 2 ADP A 501 O2B 126.4 REMARK 620 3 ADP A 501 O2A 104.3 87.2 REMARK 620 4 HOH A 623 O 150.8 82.5 78.2 REMARK 620 5 HOH A 638 O 63.9 169.0 86.0 87.6 REMARK 620 6 HOH A 688 O 77.1 100.0 170.0 95.7 85.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4PW A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YH5 RELATED DB: PDB REMARK 900 RELATED ID: 4ZFV RELATED DB: PDB REMARK 900 RELATED ID: 4ZLU RELATED DB: PDB REMARK 900 RELATED ID: 5BSB RELATED DB: PDB DBREF 5BVC A 1 439 UNP B3VI55 B3VI55_LIPST 1 439 SEQADV 5BVC GLY A 440 UNP B3VI55 EXPRESSION TAG SEQADV 5BVC SER A 441 UNP B3VI55 EXPRESSION TAG SEQADV 5BVC HIS A 442 UNP B3VI55 EXPRESSION TAG SEQADV 5BVC HIS A 443 UNP B3VI55 EXPRESSION TAG SEQADV 5BVC HIS A 444 UNP B3VI55 EXPRESSION TAG SEQADV 5BVC HIS A 445 UNP B3VI55 EXPRESSION TAG SEQADV 5BVC HIS A 446 UNP B3VI55 EXPRESSION TAG SEQADV 5BVC HIS A 447 UNP B3VI55 EXPRESSION TAG SEQRES 1 A 447 MET PRO ILE ALA THR SER THR GLY ASP ASN VAL LEU ASP SEQRES 2 A 447 PHE THR VAL LEU GLY LEU ASN SER GLY THR SER MET ASP SEQRES 3 A 447 GLY ILE ASP CYS ALA LEU CYS HIS PHE TYR GLN LYS THR SEQRES 4 A 447 PRO ASP ALA PRO MET GLU PHE GLU LEU LEU GLU TYR GLY SEQRES 5 A 447 GLU VAL PRO LEU ALA GLN PRO ILE LYS GLN ARG VAL MET SEQRES 6 A 447 ARG MET ILE LEU GLU ASP THR THR SER PRO SER GLU LEU SEQRES 7 A 447 SER GLU VAL ASN VAL ILE LEU GLY GLU HIS PHE ALA ASP SEQRES 8 A 447 ALA VAL ARG GLN PHE ALA ALA GLU ARG ASN VAL ASP LEU SEQRES 9 A 447 SER THR ILE ASP ALA ILE ALA SER HIS GLY GLN THR ILE SEQRES 10 A 447 TRP LEU LEU SER MET PRO GLU GLU GLY GLN VAL LYS SER SEQRES 11 A 447 ALA LEU THR MET ALA GLU GLY ALA ILE LEU ALA SER ARG SEQRES 12 A 447 THR GLY ILE THR SER ILE THR ASP PHE ARG ILE SER ASP SEQRES 13 A 447 GLN ALA ALA GLY ARG GLN GLY ALA PRO LEU ILE ALA PHE SEQRES 14 A 447 PHE ASP ALA LEU LEU LEU HIS HIS PRO THR LYS LEU ARG SEQRES 15 A 447 ALA CYS GLN ASN ILE GLY GLY ILE ALA ASN VAL CYS PHE SEQRES 16 A 447 ILE PRO PRO ASP VAL ASP GLY ARG ARG THR ASP GLU TYR SEQRES 17 A 447 TYR ASP PHE ASP THR GLY PRO GLY ASN VAL PHE ILE ASP SEQRES 18 A 447 ALA VAL VAL ARG HIS PHE THR ASN GLY GLU GLN GLU TYR SEQRES 19 A 447 ASP LYS ASP GLY ALA MET GLY LYS ARG GLY LYS VAL ASP SEQRES 20 A 447 GLN GLU LEU VAL ASP ASP PHE LEU LYS MET PRO TYR PHE SEQRES 21 A 447 GLN LEU ASP PRO PRO LYS THR THR GLY ARG GLU VAL PHE SEQRES 22 A 447 ARG ASP THR LEU ALA HIS ASP LEU ILE ARG ARG ALA GLU SEQRES 23 A 447 ALA LYS GLY LEU SER PRO ASP ASP ILE VAL ALA THR THR SEQRES 24 A 447 THR ARG ILE THR ALA GLN ALA ILE VAL ASP HIS TYR ARG SEQRES 25 A 447 ARG TYR ALA PRO SER GLN GLU ILE ASP GLU ILE PHE MET SEQRES 26 A 447 CYS GLY GLY GLY ALA TYR ASN PRO ASN ILE VAL GLU PHE SEQRES 27 A 447 ILE GLN GLN SER TYR PRO ASN THR LYS ILE MET MET LEU SEQRES 28 A 447 ASP GLU ALA GLY VAL PRO ALA GLY ALA LYS GLU ALA ILE SEQRES 29 A 447 THR PHE ALA TRP GLN GLY MET GLU ALA LEU VAL GLY ARG SEQRES 30 A 447 SER ILE PRO VAL PRO THR ARG VAL GLU THR ARG GLN HIS SEQRES 31 A 447 TYR VAL LEU GLY LYS VAL SER PRO GLY LEU ASN TYR ARG SEQRES 32 A 447 SER VAL MET LYS LYS GLY MET ALA PHE GLY GLY ASP ALA SEQRES 33 A 447 GLN GLN LEU PRO TRP VAL SER GLU MET ILE VAL LYS LYS SEQRES 34 A 447 LYS GLY LYS VAL ILE THR ASN ASN TRP ALA GLY SER HIS SEQRES 35 A 447 HIS HIS HIS HIS HIS HET ADP A 501 27 HET 4PW A 502 11 HET MG A 503 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM 4PW LEVOGLUCOSAN HETNAM MG MAGNESIUM ION HETSYN 4PW (1R,2S,3S,4R,5R)-6,8-DIOXABICYCLO[3.2.1]OCTANE-2,3,4- HETSYN 2 4PW TRIOL FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 4PW C6 H10 O5 FORMUL 4 MG MG 2+ FORMUL 5 HOH *292(H2 O) HELIX 1 AA1 ALA A 57 ASP A 71 1 15 HELIX 2 AA2 SER A 74 ARG A 100 1 27 HELIX 3 AA3 ASP A 103 ILE A 107 5 5 HELIX 4 AA4 GLU A 136 GLY A 145 1 10 HELIX 5 AA5 ASP A 151 ALA A 159 1 9 HELIX 6 AA6 ILE A 167 HIS A 176 1 10 HELIX 7 AA7 PHE A 219 HIS A 226 1 8 HELIX 8 AA8 PHE A 227 ASN A 229 5 3 HELIX 9 AA9 ASP A 235 ASP A 237 5 3 HELIX 10 AB1 GLY A 238 GLY A 244 1 7 HELIX 11 AB2 ASP A 247 LEU A 255 1 9 HELIX 12 AB3 MET A 257 LEU A 262 1 6 HELIX 13 AB4 ASP A 275 LYS A 288 1 14 HELIX 14 AB5 SER A 291 ALA A 315 1 25 HELIX 15 AB6 GLY A 327 TYR A 331 5 5 HELIX 16 AB7 ASN A 332 TYR A 343 1 12 HELIX 17 AB8 ASP A 352 GLY A 355 5 4 HELIX 18 AB9 PRO A 357 GLY A 359 5 3 HELIX 19 AC1 ALA A 360 GLY A 376 1 17 HELIX 20 AC2 ASN A 401 ALA A 411 1 11 SHEET 1 AA1 8 LYS A 395 SER A 397 0 SHEET 2 AA1 8 SER A 148 THR A 150 -1 N SER A 148 O SER A 397 SHEET 3 AA1 8 ALA A 109 SER A 112 1 N ILE A 110 O ILE A 149 SHEET 4 AA1 8 LEU A 12 ASN A 20 1 N LEU A 17 O ALA A 111 SHEET 5 AA1 8 GLY A 27 GLN A 37 -1 O ASP A 29 N ASN A 20 SHEET 6 AA1 8 MET A 44 PRO A 55 -1 O VAL A 54 N ILE A 28 SHEET 7 AA1 8 MET A 425 LYS A 429 1 O LYS A 428 N PHE A 46 SHEET 8 AA1 8 LYS A 432 ILE A 434 -1 O ILE A 434 N VAL A 427 SHEET 1 AA2 2 GLN A 115 LEU A 120 0 SHEET 2 AA2 2 SER A 130 MET A 134 -1 O LEU A 132 N TRP A 118 SHEET 1 AA3 5 TYR A 209 PRO A 215 0 SHEET 2 AA3 5 ILE A 190 ILE A 196 -1 N ALA A 191 O GLY A 214 SHEET 3 AA3 5 ARG A 182 ILE A 187 -1 N ASN A 186 O ASN A 192 SHEET 4 AA3 5 GLU A 322 CYS A 326 1 O PHE A 324 N ALA A 183 SHEET 5 AA3 5 LYS A 347 MET A 350 1 O MET A 349 N MET A 325 LINK OD2 ASP A 26 MG MG A 503 1555 1555 2.52 LINK O2B ADP A 501 MG MG A 503 1555 1555 2.57 LINK O2A ADP A 501 MG MG A 503 1555 1555 2.84 LINK MG MG A 503 O HOH A 623 1555 1555 2.24 LINK MG MG A 503 O HOH A 638 1555 1555 2.33 LINK MG MG A 503 O HOH A 688 1555 1555 2.94 CISPEP 1 ALA A 164 PRO A 165 0 -2.05 CISPEP 2 PRO A 264 PRO A 265 0 4.25 SITE 1 AC1 21 GLY A 22 THR A 23 SER A 24 ASP A 26 SITE 2 AC1 21 GLY A 188 GLY A 189 ASN A 217 ASP A 221 SITE 3 AC1 21 TYR A 234 ASP A 235 ASP A 237 GLY A 327 SITE 4 AC1 21 GLY A 328 GLU A 362 MG A 503 HOH A 619 SITE 5 AC1 21 HOH A 620 HOH A 623 HOH A 624 HOH A 632 SITE 6 AC1 21 HOH A 687 SITE 1 AC2 11 ARG A 153 PRO A 165 ASN A 186 ILE A 190 SITE 2 AC2 11 ASN A 192 ASP A 212 THR A 268 GLU A 362 SITE 3 AC2 11 HOH A 605 HOH A 626 HOH A 644 SITE 1 AC3 5 ASP A 26 ADP A 501 HOH A 623 HOH A 638 SITE 2 AC3 5 HOH A 688 CRYST1 70.250 70.250 264.190 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014235 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014235 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003785 0.00000