HEADER RNA BINDING PROTEIN/RNA 11-JUN-15 5BZ1 TITLE CRYSTAL STRUCTURE OF THE RNA-BINDING DOMAIN OF YEAST PUF5P BOUND TO TITLE 2 MFA2 RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPPRESSOR PROTEIN MPT5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 201-600; COMPND 5 SYNONYM: PROTEIN HTR1,PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 5; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*UP*GP*UP*AP*UP*UP*UP*GP*UP*A)-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: MPT5, HTR1, PUF5, YGL178W, BIC834; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS PUF RNA-BINDING DOMAIN, RNA BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.QIU,T.M.T.HALL REVDAT 3 27-SEP-23 5BZ1 1 REMARK REVDAT 2 30-SEP-15 5BZ1 1 JRNL REVDAT 1 23-SEP-15 5BZ1 0 JRNL AUTH D.WILINSKI,C.QIU,C.P.LAPOINTE,M.NEVIL,Z.T.CAMPBELL, JRNL AUTH 2 T.M.TANAKA HALL,M.WICKENS JRNL TITL RNA REGULATORY NETWORKS DIVERSIFIED THROUGH CURVATURE OF THE JRNL TITL 2 PUF PROTEIN SCAFFOLD. JRNL REF NAT COMMUN V. 6 8213 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 26364903 JRNL DOI 10.1038/NCOMMS9213 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 31174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.410 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4859 - 5.1786 0.99 2293 157 0.1794 0.1746 REMARK 3 2 5.1786 - 4.1117 1.00 2148 147 0.1428 0.1779 REMARK 3 3 4.1117 - 3.5923 1.00 2140 147 0.1595 0.2113 REMARK 3 4 3.5923 - 3.2640 1.00 2106 145 0.1793 0.1994 REMARK 3 5 3.2640 - 3.0301 1.00 2093 143 0.1944 0.2026 REMARK 3 6 3.0301 - 2.8515 1.00 2087 143 0.1943 0.2279 REMARK 3 7 2.8515 - 2.7088 1.00 2075 142 0.1868 0.2450 REMARK 3 8 2.7088 - 2.5909 1.00 2069 142 0.1878 0.2317 REMARK 3 9 2.5909 - 2.4911 1.00 2068 142 0.1941 0.2186 REMARK 3 10 2.4911 - 2.4052 1.00 2063 141 0.1857 0.2518 REMARK 3 11 2.4052 - 2.3300 1.00 2036 138 0.1929 0.2317 REMARK 3 12 2.3300 - 2.2634 1.00 2059 142 0.2063 0.2563 REMARK 3 13 2.2634 - 2.2038 0.98 2012 137 0.2111 0.2820 REMARK 3 14 2.2038 - 2.1500 0.95 1926 133 0.2380 0.2841 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3296 REMARK 3 ANGLE : 0.787 4513 REMARK 3 CHIRALITY : 0.051 552 REMARK 3 PLANARITY : 0.004 524 REMARK 3 DIHEDRAL : 13.030 1259 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 203 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): 99.1618 -33.6307 135.8224 REMARK 3 T TENSOR REMARK 3 T11: 0.2828 T22: 0.4360 REMARK 3 T33: 0.2224 T12: -0.0133 REMARK 3 T13: -0.0235 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 3.7841 L22: 2.9568 REMARK 3 L33: 5.4717 L12: -1.2313 REMARK 3 L13: -1.0292 L23: 0.6893 REMARK 3 S TENSOR REMARK 3 S11: 0.0959 S12: 0.7241 S13: 0.0001 REMARK 3 S21: -0.4066 S22: -0.0846 S23: 0.0038 REMARK 3 S31: 0.3270 S32: -0.3374 S33: -0.0059 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 258 THROUGH 321 ) REMARK 3 ORIGIN FOR THE GROUP (A): 103.1990 -29.3714 152.0385 REMARK 3 T TENSOR REMARK 3 T11: 0.2162 T22: 0.3136 REMARK 3 T33: 0.2416 T12: 0.0329 REMARK 3 T13: -0.0488 T23: 0.0636 REMARK 3 L TENSOR REMARK 3 L11: 1.5659 L22: 1.9962 REMARK 3 L33: 4.4017 L12: 0.6316 REMARK 3 L13: 0.2509 L23: 0.8624 REMARK 3 S TENSOR REMARK 3 S11: 0.0571 S12: 0.1500 S13: -0.0429 REMARK 3 S21: -0.1233 S22: -0.0596 S23: -0.1033 REMARK 3 S31: -0.0947 S32: 0.2299 S33: 0.0025 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 322 THROUGH 425 ) REMARK 3 ORIGIN FOR THE GROUP (A): 105.1785 -32.4544 174.8497 REMARK 3 T TENSOR REMARK 3 T11: 0.2006 T22: 0.2162 REMARK 3 T33: 0.1956 T12: -0.0076 REMARK 3 T13: -0.0406 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 0.7459 L22: 2.2548 REMARK 3 L33: 4.3653 L12: -0.1400 REMARK 3 L13: 0.4302 L23: -1.9961 REMARK 3 S TENSOR REMARK 3 S11: -0.0735 S12: -0.0894 S13: 0.1030 REMARK 3 S21: 0.2863 S22: 0.0654 S23: -0.0422 REMARK 3 S31: -0.2957 S32: -0.1538 S33: 0.0076 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 426 THROUGH 449 ) REMARK 3 ORIGIN FOR THE GROUP (A): 111.9530 -37.8293 193.6349 REMARK 3 T TENSOR REMARK 3 T11: 0.3203 T22: 0.3718 REMARK 3 T33: 0.3088 T12: 0.0119 REMARK 3 T13: -0.0621 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 5.0666 L22: 8.5323 REMARK 3 L33: 5.2445 L12: 6.4824 REMARK 3 L13: -4.7809 L23: -5.7291 REMARK 3 S TENSOR REMARK 3 S11: 0.2296 S12: -0.6115 S13: 0.5245 REMARK 3 S21: 0.6577 S22: -0.1264 S23: 0.2654 REMARK 3 S31: -0.3850 S32: 0.2018 S33: -0.1617 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 450 THROUGH 473 ) REMARK 3 ORIGIN FOR THE GROUP (A): 117.3081 -46.4044 190.7314 REMARK 3 T TENSOR REMARK 3 T11: 0.2735 T22: 0.2178 REMARK 3 T33: 0.2850 T12: -0.0387 REMARK 3 T13: -0.0351 T23: 0.0774 REMARK 3 L TENSOR REMARK 3 L11: 9.2034 L22: 4.2044 REMARK 3 L33: 5.8594 L12: 3.0595 REMARK 3 L13: 4.9004 L23: 0.1130 REMARK 3 S TENSOR REMARK 3 S11: -0.2879 S12: 0.5868 S13: -0.1009 REMARK 3 S21: -0.0190 S22: 0.0140 S23: -0.7015 REMARK 3 S31: -0.1551 S32: 0.3524 S33: 0.2458 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 474 THROUGH 553 ) REMARK 3 ORIGIN FOR THE GROUP (A): 118.0754 -48.7398 198.0387 REMARK 3 T TENSOR REMARK 3 T11: 0.4682 T22: 0.2962 REMARK 3 T33: 0.3085 T12: 0.0100 REMARK 3 T13: -0.1749 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 3.1173 L22: 5.6506 REMARK 3 L33: 3.0228 L12: 0.1723 REMARK 3 L13: -0.2699 L23: -0.9504 REMARK 3 S TENSOR REMARK 3 S11: -0.2897 S12: -0.4182 S13: 0.3100 REMARK 3 S21: 0.4472 S22: 0.0468 S23: -0.7229 REMARK 3 S31: -0.1576 S32: 0.2000 S33: 0.1889 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 554 THROUGH 579 ) REMARK 3 ORIGIN FOR THE GROUP (A): 120.5783 -54.0803 205.8263 REMARK 3 T TENSOR REMARK 3 T11: 0.4789 T22: 0.3615 REMARK 3 T33: 0.4837 T12: 0.1077 REMARK 3 T13: -0.2164 T23: 0.0671 REMARK 3 L TENSOR REMARK 3 L11: 4.9634 L22: 8.1732 REMARK 3 L33: 8.5648 L12: 4.3884 REMARK 3 L13: -1.7281 L23: -0.7369 REMARK 3 S TENSOR REMARK 3 S11: 0.1136 S12: -0.9122 S13: -0.2432 REMARK 3 S21: 0.9602 S22: -0.5314 S23: -1.0452 REMARK 3 S31: -0.3405 S32: 0.8672 S33: 0.4056 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 580 THROUGH 599 ) REMARK 3 ORIGIN FOR THE GROUP (A): 116.0724 -64.7412 198.6182 REMARK 3 T TENSOR REMARK 3 T11: 0.4910 T22: 0.2978 REMARK 3 T33: 0.3332 T12: -0.0005 REMARK 3 T13: -0.0598 T23: 0.0783 REMARK 3 L TENSOR REMARK 3 L11: 2.9238 L22: 3.8211 REMARK 3 L33: 5.6797 L12: 1.5176 REMARK 3 L13: 4.0132 L23: 1.3542 REMARK 3 S TENSOR REMARK 3 S11: 0.3975 S12: -0.2086 S13: -0.8319 REMARK 3 S21: 0.0660 S22: -0.0581 S23: -0.1819 REMARK 3 S31: 0.4518 S32: -0.2816 S33: -0.2691 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 100.7826 -50.3571 167.3558 REMARK 3 T TENSOR REMARK 3 T11: 0.4861 T22: 0.3160 REMARK 3 T33: 0.3099 T12: 0.0094 REMARK 3 T13: -0.0650 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 0.6976 L22: 2.2836 REMARK 3 L33: 0.7813 L12: -0.1431 REMARK 3 L13: -0.1976 L23: -1.2478 REMARK 3 S TENSOR REMARK 3 S11: 0.3481 S12: 0.1701 S13: -0.0116 REMARK 3 S21: -0.5949 S22: -0.1320 S23: 0.2049 REMARK 3 S31: 0.7830 S32: 0.2329 S33: -0.2655 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BZ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210792. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31214 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.56500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5BYM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, CBTP, PH 7.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.89267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 111.78533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.83900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 139.73167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.94633 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.89267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 111.78533 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 139.73167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 83.83900 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.94633 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 201 REMARK 465 MET A 202 REMARK 465 ASN A 476 REMARK 465 GLY A 477 REMARK 465 GLY A 478 REMARK 465 ALA A 479 REMARK 465 SER A 480 REMARK 465 GLN A 481 REMARK 465 ARG A 482 REMARK 465 THR A 483 REMARK 465 ALA A 484 REMARK 465 ALA A 536 REMARK 465 TYR A 537 REMARK 465 ASN A 538 REMARK 465 LYS A 539 REMARK 465 ASN A 540 REMARK 465 SER A 541 REMARK 465 ASN A 542 REMARK 465 ALA A 543 REMARK 465 ILE A 544 REMARK 465 GLY A 545 REMARK 465 GLN A 546 REMARK 465 ASN A 547 REMARK 465 SER A 548 REMARK 465 SER A 549 REMARK 465 SER A 550 REMARK 465 THR A 551 REMARK 465 LEU A 552 REMARK 465 GLY A 600 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 367 -115.42 51.35 REMARK 500 TYR A 531 17.18 -141.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5BYM RELATED DB: PDB REMARK 900 5BYM CONTAINS THE SAME PROTEIN COMPLEXED WITH DIFFERENT RNA. REMARK 900 RELATED ID: 5BZ5 RELATED DB: PDB DBREF 5BZ1 A 201 600 UNP P39016 MPT5_YEAST 201 600 DBREF 5BZ1 B 1 10 PDB 5BZ1 5BZ1 1 10 SEQRES 1 A 400 SER MET VAL GLU ILE SER ALA LEU PRO LEU ARG ASP LEU SEQRES 2 A 400 ASP TYR ILE LYS LEU ALA THR ASP GLN PHE GLY CYS ARG SEQRES 3 A 400 PHE LEU GLN LYS LYS LEU GLU THR PRO SER GLU SER ASN SEQRES 4 A 400 MET VAL ARG ASP LEU MET TYR GLU GLN ILE LYS PRO PHE SEQRES 5 A 400 PHE LEU ASP LEU ILE LEU ASP PRO PHE GLY ASN TYR LEU SEQRES 6 A 400 VAL GLN LYS LEU CYS ASP TYR LEU THR ALA GLU GLN LYS SEQRES 7 A 400 THR LEU LEU ILE GLN THR ILE TYR PRO ASN VAL PHE GLN SEQRES 8 A 400 ILE SER ILE ASN GLN TYR GLY THR ARG SER LEU GLN LYS SEQRES 9 A 400 ILE ILE ASP THR VAL ASP ASN GLU VAL GLN ILE ASP LEU SEQRES 10 A 400 ILE ILE LYS GLY PHE SER GLN GLU PHE THR SER ILE GLU SEQRES 11 A 400 GLN VAL VAL THR LEU ILE ASN ASP LEU ASN GLY ASN HIS SEQRES 12 A 400 VAL ILE GLN LYS CYS ILE PHE LYS PHE SER PRO SER LYS SEQRES 13 A 400 PHE GLY PHE ILE ILE ASP ALA ILE VAL GLU GLN ASN ASN SEQRES 14 A 400 ILE ILE THR ILE SER THR HIS LYS HIS GLY CYS CYS VAL SEQRES 15 A 400 LEU GLN LYS LEU LEU SER VAL CYS THR LEU GLN GLN ILE SEQRES 16 A 400 PHE LYS ILE SER VAL LYS ILE VAL GLN PHE LEU PRO GLY SEQRES 17 A 400 LEU ILE ASN ASP GLN PHE GLY ASN TYR ILE ILE GLN PHE SEQRES 18 A 400 LEU LEU ASP ILE LYS GLU LEU ASP PHE TYR LEU LEU ALA SEQRES 19 A 400 GLU LEU PHE ASN ARG LEU SER ASN GLU LEU CYS GLN LEU SEQRES 20 A 400 SER CYS LEU LYS PHE SER SER ASN VAL VAL GLU LYS PHE SEQRES 21 A 400 ILE LYS LYS LEU PHE ARG ILE ILE THR GLY PHE ILE VAL SEQRES 22 A 400 ASN ASN ASN GLY GLY ALA SER GLN ARG THR ALA VAL ALA SEQRES 23 A 400 SER ASP ASP VAL ILE ASN ALA SER MET ASN ILE LEU LEU SEQRES 24 A 400 THR THR ILE ASP ILE PHE THR VAL ASN LEU ASN VAL LEU SEQRES 25 A 400 ILE ARG ASP ASN PHE GLY ASN TYR ALA LEU GLN THR LEU SEQRES 26 A 400 LEU ASP VAL LYS ASN TYR SER PRO LEU LEU ALA TYR ASN SEQRES 27 A 400 LYS ASN SER ASN ALA ILE GLY GLN ASN SER SER SER THR SEQRES 28 A 400 LEU ASN TYR GLY ASN PHE CYS ASN ASP PHE SER LEU LYS SEQRES 29 A 400 ILE GLY ASN LEU ILE VAL LEU THR LYS GLU LEU LEU PRO SEQRES 30 A 400 SER ILE LYS THR THR SER TYR ALA LYS LYS ILE LYS LEU SEQRES 31 A 400 LYS VAL LYS ALA TYR ALA GLU ALA THR GLY SEQRES 1 B 10 U G U A U U U G U A FORMUL 3 HOH *208(H2 O) HELIX 1 AA1 GLU A 204 LEU A 208 5 5 HELIX 2 AA2 PRO A 209 LEU A 213 5 5 HELIX 3 AA3 ASP A 214 THR A 220 1 7 HELIX 4 AA4 ASP A 221 GLU A 233 1 13 HELIX 5 AA5 GLU A 237 LYS A 250 1 14 HELIX 6 AA6 PHE A 252 LEU A 258 1 7 HELIX 7 AA7 PHE A 261 CYS A 270 1 10 HELIX 8 AA8 THR A 274 TYR A 286 1 13 HELIX 9 AA9 ASN A 288 ILE A 294 1 7 HELIX 10 AB1 TYR A 297 THR A 308 1 12 HELIX 11 AB2 ASN A 311 PHE A 322 1 12 HELIX 12 AB3 SER A 328 ASP A 338 1 11 HELIX 13 AB4 ASN A 340 PHE A 352 1 13 HELIX 14 AB5 SER A 353 LYS A 356 5 4 HELIX 15 AB6 PHE A 357 GLU A 366 1 10 HELIX 16 AB7 ASN A 368 THR A 375 1 8 HELIX 17 AB8 HIS A 378 CYS A 390 1 13 HELIX 18 AB9 THR A 391 PHE A 405 1 15 HELIX 19 AC1 LEU A 406 LEU A 409 5 4 HELIX 20 AC2 PHE A 414 ASP A 424 1 11 HELIX 21 AC3 ILE A 425 GLU A 427 5 3 HELIX 22 AC4 LEU A 428 SER A 441 1 14 HELIX 23 AC5 GLU A 443 CYS A 449 1 7 HELIX 24 AC6 PHE A 452 ASN A 474 1 23 HELIX 25 AC7 SER A 487 ASN A 508 1 22 HELIX 26 AC8 ASN A 508 ILE A 513 1 6 HELIX 27 AC9 PHE A 517 ASP A 527 1 11 HELIX 28 AD1 VAL A 528 LEU A 535 5 8 HELIX 29 AD2 TYR A 554 LEU A 576 1 23 HELIX 30 AD3 PRO A 577 LYS A 580 5 4 HELIX 31 AD4 TYR A 584 THR A 599 1 16 CRYST1 106.748 106.748 167.678 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009368 0.005409 0.000000 0.00000 SCALE2 0.000000 0.010817 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005964 0.00000