HEADER HYDROLASE 12-JUN-15 5C0P TITLE THE CRYSTAL STRUCTURE OF ENDO-ARABINASE FROM BACTEROIDES TITLE 2 THETAIOTAOMICRON VPI-5482 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDO-ARABINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON (STRAIN ATCC 29148 SOURCE 3 / DSM 2079 / NCTC 10582 / E50 / VPI-5482); SOURCE 4 ORGANISM_TAXID: 226186; SOURCE 5 STRAIN: ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482; SOURCE 6 GENE: BT_1873; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS ENDO-ARABINASE, STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, MCSG, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,M.CUFF,G.JOACHIMIAK,M.ENDRES,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 25-DEC-19 5C0P 1 REMARK REVDAT 2 27-SEP-17 5C0P 1 SOURCE KEYWDS REMARK REVDAT 1 01-JUL-15 5C0P 0 JRNL AUTH K.TAN,M.CUFF,G.JOACHIMIAK,M.ENDRES,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF ENDO-ARABINASE FROM BACTEROIDES JRNL TITL 2 THETAIOTAOMICRON VPI-5482 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 42629 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2120 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.1393 - 3.7761 1.00 2972 158 0.1361 0.1417 REMARK 3 2 3.7761 - 2.9981 1.00 2913 156 0.1379 0.1349 REMARK 3 3 2.9981 - 2.6194 1.00 2900 140 0.1584 0.1828 REMARK 3 4 2.6194 - 2.3800 1.00 2895 163 0.1584 0.1577 REMARK 3 5 2.3800 - 2.2095 1.00 2883 149 0.1455 0.1658 REMARK 3 6 2.2095 - 2.0792 1.00 2872 162 0.1446 0.1701 REMARK 3 7 2.0792 - 1.9751 1.00 2847 164 0.1439 0.1707 REMARK 3 8 1.9751 - 1.8892 1.00 2846 170 0.1396 0.1655 REMARK 3 9 1.8892 - 1.8164 1.00 2898 135 0.1437 0.1617 REMARK 3 10 1.8164 - 1.7538 1.00 2865 141 0.1548 0.2325 REMARK 3 11 1.7538 - 1.6989 1.00 2898 129 0.1531 0.1830 REMARK 3 12 1.6989 - 1.6504 1.00 2818 176 0.1750 0.1833 REMARK 3 13 1.6504 - 1.6069 0.96 2741 149 0.1903 0.1950 REMARK 3 14 1.6069 - 1.5677 0.71 2077 77 0.2145 0.2747 REMARK 3 15 1.5677 - 1.5321 0.38 1084 51 0.2172 0.2417 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2371 REMARK 3 ANGLE : 1.161 3222 REMARK 3 CHIRALITY : 0.083 340 REMARK 3 PLANARITY : 0.005 406 REMARK 3 DIHEDRAL : 11.977 852 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7206 10.0818 36.6534 REMARK 3 T TENSOR REMARK 3 T11: 0.0745 T22: 0.0838 REMARK 3 T33: 0.0960 T12: 0.0057 REMARK 3 T13: 0.0037 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.7362 L22: 1.6121 REMARK 3 L33: 1.5103 L12: 0.0752 REMARK 3 L13: 0.0414 L23: -0.8016 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: 0.0460 S13: -0.0647 REMARK 3 S21: -0.0404 S22: -0.0601 S23: -0.1602 REMARK 3 S31: 0.0668 S32: 0.0988 S33: 0.0731 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4446 18.0063 27.3108 REMARK 3 T TENSOR REMARK 3 T11: 0.0695 T22: 0.0941 REMARK 3 T33: 0.0465 T12: -0.0068 REMARK 3 T13: -0.0099 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 1.6303 L22: 2.1324 REMARK 3 L33: 1.7004 L12: -0.0595 REMARK 3 L13: -0.1840 L23: -0.3115 REMARK 3 S TENSOR REMARK 3 S11: 0.0269 S12: 0.1812 S13: 0.0730 REMARK 3 S21: -0.1042 S22: -0.0527 S23: -0.1057 REMARK 3 S31: -0.0220 S32: 0.0251 S33: 0.0164 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2862 30.0353 33.3053 REMARK 3 T TENSOR REMARK 3 T11: 0.0992 T22: 0.0972 REMARK 3 T33: 0.0971 T12: 0.0076 REMARK 3 T13: 0.0024 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 0.8788 L22: 2.9276 REMARK 3 L33: 1.9750 L12: 0.3909 REMARK 3 L13: 0.6145 L23: 1.9760 REMARK 3 S TENSOR REMARK 3 S11: -0.0308 S12: 0.1004 S13: 0.1104 REMARK 3 S21: -0.1461 S22: 0.0249 S23: -0.0595 REMARK 3 S31: -0.1164 S32: 0.0227 S33: 0.0195 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 227 THROUGH 323 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8064 21.7700 47.1620 REMARK 3 T TENSOR REMARK 3 T11: 0.1003 T22: 0.1062 REMARK 3 T33: 0.0691 T12: 0.0028 REMARK 3 T13: -0.0017 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.1761 L22: 0.7003 REMARK 3 L33: 0.5394 L12: -0.3543 REMARK 3 L13: 0.2218 L23: -0.2941 REMARK 3 S TENSOR REMARK 3 S11: -0.0545 S12: -0.1556 S13: 0.0043 REMARK 3 S21: 0.1044 S22: 0.0496 S23: -0.0083 REMARK 3 S31: -0.0136 S32: -0.0585 S33: 0.0040 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5C0P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210846. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45139 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.48600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.16M MGCL2, 0.08M TRIS:HCL, 24% (W/V) REMARK 280 PEG4000, 15(V/V)GLYCEROL, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.68300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.52450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 10.84150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 26 REMARK 465 ASN A 27 REMARK 465 ALA A 28 REMARK 465 THR A 29 REMARK 465 SER A 30 REMARK 465 SER A 31 REMARK 465 THR A 32 REMARK 465 GLU A 33 REMARK 465 PRO A 34 REMARK 465 ASP A 35 REMARK 465 GLU A 36 REMARK 465 VAL A 37 REMARK 465 GLY A 38 REMARK 465 GLY A 39 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 60 CE NZ REMARK 470 LYS A 96 CE NZ REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 GLN A 307 CD OE1 NE2 REMARK 470 LYS A 319 CD CE NZ REMARK 470 LYS A 322 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY A 223 O HOH A 501 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 72 92.04 78.17 REMARK 500 LEU A 83 -7.64 78.83 REMARK 500 ASP A 104 -76.45 84.69 REMARK 500 ILE A 184 -70.04 70.16 REMARK 500 HIS A 286 71.01 54.72 REMARK 500 PRO A 304 -164.46 -71.92 REMARK 500 GLN A 307 -53.36 69.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GOL A 408 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 109 OD1 REMARK 620 2 HOH A 534 O 88.9 REMARK 620 3 HOH A 553 O 86.9 85.4 REMARK 620 4 HOH A 597 O 81.9 170.6 95.6 REMARK 620 5 HOH A 712 O 96.4 83.9 168.7 95.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 183 O REMARK 620 2 HOH A 731 O 178.6 REMARK 620 3 HOH A 726 O 95.1 86.3 REMARK 620 4 HOH A 652 O 85.1 94.6 90.7 REMARK 620 5 HOH A 521 O 89.7 90.6 89.3 174.8 REMARK 620 6 HOH A 696 O 89.7 88.9 174.9 91.5 88.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRS A 409 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC100033 RELATED DB: TARGETTRACK DBREF 5C0P A 29 323 UNP Q8A6K8 Q8A6K8_BACTN 29 323 SEQADV 5C0P SER A 26 UNP Q8A6K8 EXPRESSION TAG SEQADV 5C0P ASN A 27 UNP Q8A6K8 EXPRESSION TAG SEQADV 5C0P ALA A 28 UNP Q8A6K8 EXPRESSION TAG SEQRES 1 A 298 SER ASN ALA THR SER SER THR GLU PRO ASP GLU VAL GLY SEQRES 2 A 298 GLY GLU SER PHE THR ILE PRO VAL SER SER LEU ARG LEU SEQRES 3 A 298 ARG ASP PRO PHE ILE LEU VAL ASP LYS LYS THR SER MSE SEQRES 4 A 298 TYR TYR LEU HIS PHE ASN ASN ASN LEU LYS ILE ARG VAL SEQRES 5 A 298 TYR LYS SER LYS ASP LEU SER THR TRP LYS ASP GLU GLY SEQRES 6 A 298 TYR SER PHE ILE ALA LYS SER ASP PHE TRP GLY GLN GLN SEQRES 7 A 298 ASP PHE TRP ALA PRO ASP VAL TYR GLU TYR GLU GLY ARG SEQRES 8 A 298 TYR TYR LEU PHE THR THR PHE SER ASN ALA GLY VAL LYS SEQRES 9 A 298 ARG GLY THR SER ILE LEU VAL SER ASP SER PRO LYS GLY SEQRES 10 A 298 PRO PHE THR PRO LEU VAL ASN LYS ALA ILE THR PRO SER SEQRES 11 A 298 GLY TRP MSE CYS LEU ASP GLY SER LEU TYR ILE ASP LYS SEQRES 12 A 298 GLU GLY ASN PRO TRP LEU LEU PHE CYS ARG GLU TRP LEU SEQRES 13 A 298 GLU THR ILE ASP GLY GLU ILE TYR ALA GLN ARG LEU ALA SEQRES 14 A 298 LYS ASP LEU LYS THR THR GLU GLY ASP PRO TYR LEU LEU SEQRES 15 A 298 PHE LYS ALA SER GLU ALA PRO TRP VAL GLY SER ILE THR SEQRES 16 A 298 SER SER GLY VAL THR GLY ASN VAL THR ASP ALA PRO PHE SEQRES 17 A 298 ILE TYR ARG LEU ASP ASP GLY LYS LEU ILE MSE LEU TRP SEQRES 18 A 298 SER SER PHE ARG LYS THR ASP GLY LYS TYR ALA ILE GLY SEQRES 19 A 298 GLN ALA VAL SER ALA SER GLY ASN VAL LEU GLY PRO TRP SEQRES 20 A 298 VAL GLN GLU PRO GLU THR LEU ASN SER ASP ASP GLY GLY SEQRES 21 A 298 HIS ALA MSE VAL PHE LYS ASP LEU LYS GLY ARG LEU MSE SEQRES 22 A 298 ILE SER TYR HIS ALA PRO ASN SER GLN THR GLU HIS PRO SEQRES 23 A 298 VAL ILE THR PRO ILE TYR ILE LYS ASP GLY LYS PHE MODRES 5C0P MSE A 64 MET MODIFIED RESIDUE MODRES 5C0P MSE A 158 MET MODIFIED RESIDUE MODRES 5C0P MSE A 244 MET MODIFIED RESIDUE MODRES 5C0P MSE A 288 MET MODIFIED RESIDUE MODRES 5C0P MSE A 298 MET MODIFIED RESIDUE HET MSE A 64 8 HET MSE A 158 16 HET MSE A 244 8 HET MSE A 288 8 HET MSE A 298 8 HET MG A 401 1 HET MG A 402 1 HET CL A 403 1 HET CL A 404 1 HET GOL A 405 6 HET GOL A 406 6 HET GOL A 407 6 HET GOL A 408 5 HET TRS A 409 8 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN TRS TRIS BUFFER FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 MG 2(MG 2+) FORMUL 4 CL 2(CL 1-) FORMUL 6 GOL 4(C3 H8 O3) FORMUL 10 TRS C4 H12 N O3 1+ FORMUL 11 HOH *293(H2 O) HELIX 1 AA1 SER A 47 LEU A 49 5 3 HELIX 2 AA2 GLU A 179 ILE A 184 1 6 HELIX 3 AA3 SER A 211 ALA A 213 5 3 SHEET 1 AA1 5 ILE A 44 PRO A 45 0 SHEET 2 AA1 5 THR A 85 PHE A 93 -1 O TRP A 86 N ILE A 44 SHEET 3 AA1 5 ILE A 75 SER A 80 -1 N VAL A 77 O GLY A 90 SHEET 4 AA1 5 MSE A 64 ASN A 70 -1 N TYR A 65 O SER A 80 SHEET 5 AA1 5 PHE A 55 ASP A 59 -1 N LEU A 57 O TYR A 66 SHEET 1 AA2 4 GLN A 103 TYR A 113 0 SHEET 2 AA2 4 ARG A 116 ASN A 125 -1 O ARG A 116 N TYR A 113 SHEET 3 AA2 4 VAL A 128 SER A 137 -1 O SER A 137 N TYR A 117 SHEET 4 AA2 4 THR A 145 PRO A 146 -1 O THR A 145 N VAL A 136 SHEET 1 AA3 4 CYS A 159 ILE A 166 0 SHEET 2 AA3 4 PRO A 172 ARG A 178 -1 O LEU A 175 N SER A 163 SHEET 3 AA3 4 GLU A 187 LEU A 193 -1 O GLN A 191 N LEU A 174 SHEET 4 AA3 4 THR A 200 LYS A 209 -1 O TYR A 205 N ALA A 190 SHEET 1 AA4 2 ILE A 219 SER A 221 0 SHEET 2 AA4 2 VAL A 224 GLY A 226 -1 O GLY A 226 N ILE A 219 SHEET 1 AA5 4 ASP A 230 ARG A 236 0 SHEET 2 AA5 4 LEU A 242 PHE A 249 -1 O ILE A 243 N TYR A 235 SHEET 3 AA5 4 TYR A 256 SER A 263 -1 O GLY A 259 N TRP A 246 SHEET 4 AA5 4 VAL A 273 GLN A 274 -1 O VAL A 273 N VAL A 262 SHEET 1 AA6 3 GLY A 285 LYS A 291 0 SHEET 2 AA6 3 LEU A 297 ALA A 303 -1 O MSE A 298 N PHE A 290 SHEET 3 AA6 3 HIS A 310 PRO A 315 -1 O VAL A 312 N TYR A 301 LINK C SER A 63 N MSE A 64 1555 1555 1.33 LINK C MSE A 64 N TYR A 65 1555 1555 1.33 LINK OD1 ASP A 109 MG MG A 402 1555 1555 2.12 LINK C TRP A 157 N AMSE A 158 1555 1555 1.33 LINK C TRP A 157 N BMSE A 158 1555 1555 1.33 LINK C AMSE A 158 N CYS A 159 1555 1555 1.33 LINK C BMSE A 158 N CYS A 159 1555 1555 1.33 LINK O THR A 183 MG MG A 401 1555 1555 2.13 LINK C ILE A 243 N MSE A 244 1555 1555 1.33 LINK C MSE A 244 N LEU A 245 1555 1555 1.32 LINK C ALA A 287 N MSE A 288 1555 1555 1.33 LINK C MSE A 288 N VAL A 289 1555 1555 1.32 LINK C LEU A 297 N MSE A 298 1555 1555 1.33 LINK C MSE A 298 N ILE A 299 1555 1555 1.33 LINK MG MG A 401 O HOH A 731 1555 1555 2.06 LINK MG MG A 401 O HOH A 726 1555 1555 2.10 LINK MG MG A 401 O HOH A 652 1555 1555 2.10 LINK MG MG A 401 O HOH A 521 1555 1555 2.12 LINK MG MG A 401 O HOH A 696 1555 1555 2.07 LINK MG MG A 402 O HOH A 534 1555 1555 2.10 LINK MG MG A 402 O HOH A 553 1555 1555 2.12 LINK MG MG A 402 O HOH A 597 1555 1555 2.11 LINK MG MG A 402 O HOH A 712 1555 1555 2.12 CISPEP 1 GLY A 142 PRO A 143 0 6.87 CISPEP 2 GLY A 270 PRO A 271 0 0.30 CISPEP 3 ALA A 303 PRO A 304 0 -14.93 SITE 1 AC1 6 THR A 183 HOH A 521 HOH A 652 HOH A 696 SITE 2 AC1 6 HOH A 726 HOH A 731 SITE 1 AC2 6 ASP A 109 HIS A 286 HOH A 534 HOH A 553 SITE 2 AC2 6 HOH A 597 HOH A 712 SITE 1 AC3 4 PHE A 93 LYS A 96 HOH A 606 HOH A 769 SITE 1 AC4 4 TYR A 111 GLU A 112 HOH A 525 HOH A 703 SITE 1 AC5 7 SER A 63 GLU A 169 TRP A 173 GLY A 266 SITE 2 AC5 7 ASN A 267 VAL A 268 HOH A 511 SITE 1 AC6 9 ALA A 194 ASP A 196 LYS A 198 THR A 199 SITE 2 AC6 9 TYR A 317 HOH A 533 HOH A 557 HOH A 569 SITE 3 AC6 9 HOH A 621 SITE 1 AC7 4 LEU A 49 ARG A 50 TYR A 78 HOH A 587 SITE 1 AC8 6 ASN A 280 TYR A 301 THR A 314 ILE A 316 SITE 2 AC8 6 HOH A 502 HOH A 645 SITE 1 AC9 7 ARG A 52 ASP A 53 TRP A 106 ASP A 161 SITE 2 AC9 7 ASP A 230 HIS A 286 HOH A 522 CRYST1 83.804 83.804 43.366 90.00 90.00 90.00 P 43 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011933 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011933 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023060 0.00000