HEADER CELL ADHESION 12-JUN-15 5C14 TITLE CRYSTAL STRUCTURE OF PECAM-1 D1D2 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLATELET ENDOTHELIAL CELL ADHESION MOLECULE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: D1D2 DOMAIN (UNP RESIDUES 28-229); COMPND 5 SYNONYM: PECAM-1,ENDOCAM,GPIIA',PECA1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PLATELET ENDOTHELIAL CELL ADHESION MOLECULE; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: D1D2 DOMAIN (UNP RESIDUES 28-229); COMPND 11 SYNONYM: PECAM-1,ENDOCAM,GPIIA',PECA1; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PECAM1; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7215; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PECAM1; SOURCE 13 EXPRESSION_SYSTEM: DROSOPHILA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7215 KEYWDS IMMUNOGLOBULIN, CELL ADHESION MOLECULE, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR D.ZHOU,C.PADDOCK,P.NEWMAN,J.ZHU REVDAT 3 29-JUL-20 5C14 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 09-MAR-16 5C14 1 JRNL REVDAT 1 06-JAN-16 5C14 0 JRNL AUTH C.PADDOCK,D.ZHOU,P.LERTKIATMONGKOL,P.J.NEWMAN,J.ZHU JRNL TITL STRUCTURAL BASIS FOR PECAM-1 HOMOPHILIC BINDING. JRNL REF BLOOD V. 127 1052 2016 JRNL REFN ESSN 1528-0020 JRNL PMID 26702061 JRNL DOI 10.1182/BLOOD-2015-07-660092 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.450 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 36246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1014 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7941 - 5.3262 1.00 5029 148 0.2238 0.2648 REMARK 3 2 5.3262 - 4.2412 1.00 5039 148 0.1709 0.2036 REMARK 3 3 4.2412 - 3.7091 1.00 5042 141 0.1972 0.2265 REMARK 3 4 3.7091 - 3.3718 1.00 5015 143 0.2458 0.3078 REMARK 3 5 3.3718 - 3.1311 1.00 5023 145 0.3041 0.3709 REMARK 3 6 3.1311 - 2.9472 1.00 5046 144 0.3559 0.3875 REMARK 3 7 2.9472 - 2.8000 1.00 5038 145 0.3987 0.4558 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.710 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 3399 REMARK 3 ANGLE : 1.714 4569 REMARK 3 CHIRALITY : 0.066 534 REMARK 3 PLANARITY : 0.009 571 REMARK 3 DIHEDRAL : 17.352 1292 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 19.9177 33.0702 -0.8912 REMARK 3 T TENSOR REMARK 3 T11: 0.6149 T22: 0.6443 REMARK 3 T33: 0.4905 T12: 0.3242 REMARK 3 T13: 0.0535 T23: 0.0726 REMARK 3 L TENSOR REMARK 3 L11: 0.7233 L22: 0.5571 REMARK 3 L33: 0.7860 L12: 0.1936 REMARK 3 L13: 0.1711 L23: 0.2333 REMARK 3 S TENSOR REMARK 3 S11: 0.0602 S12: 0.1525 S13: 0.0919 REMARK 3 S21: -0.0286 S22: -0.0226 S23: 0.1266 REMARK 3 S31: -0.0173 S32: -0.0746 S33: -0.0201 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5C14 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000210855. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97624, 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36261 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.170 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.79 REMARK 200 R MERGE FOR SHELL (I) : 0.49300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 0.1 M MGNO3, 20% REMARK 280 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 52.00500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 52.00500 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 140.91700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 52.00500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 70.45850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 52.00500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 211.37550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 52.00500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 211.37550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.00500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.45850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 52.00500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 52.00500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 140.91700 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 52.00500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 52.00500 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 140.91700 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 52.00500 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 211.37550 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 52.00500 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 70.45850 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 52.00500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 70.45850 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 52.00500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 211.37550 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 52.00500 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 52.00500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 140.91700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A -1 REMARK 465 SER A 0 REMARK 465 GLN A 1 REMARK 465 GLU A 2 REMARK 465 ASN A 3 REMARK 465 GLU A 205 REMARK 465 ASN A 206 REMARK 465 LEU A 207 REMARK 465 TYR A 208 REMARK 465 PHE A 209 REMARK 465 GLN A 210 REMARK 465 ARG B -1 REMARK 465 SER B 0 REMARK 465 GLN B 1 REMARK 465 GLU B 2 REMARK 465 ASN B 3 REMARK 465 GLU B 205 REMARK 465 ASN B 206 REMARK 465 LEU B 207 REMARK 465 TYR B 208 REMARK 465 PHE B 209 REMARK 465 GLN B 210 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 25 C1 NAG B 303 1.16 REMARK 500 ND2 ASN A 57 O5 NAG A 306 1.73 REMARK 500 ND2 ASN B 57 O5 NAG B 304 1.93 REMARK 500 NH1 ARG A 152 O GLU A 165 2.02 REMARK 500 ND2 ASN B 25 O5 NAG B 303 2.04 REMARK 500 ND2 ASN A 25 C2 NAG A 305 2.07 REMARK 500 CG ASN A 124 C1 NAG A 307 2.12 REMARK 500 OG SER B 14 O ASP B 17 2.15 REMARK 500 ND2 ASN A 124 O5 NAG A 307 2.16 REMARK 500 OG SER B 60 OE1 GLU B 65 2.17 REMARK 500 CG ASN A 25 C1 NAG A 305 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 86 -86.33 -114.20 REMARK 500 ASN A 88 -151.22 -144.72 REMARK 500 LYS A 89 71.16 47.31 REMARK 500 GLU A 130 -168.84 -101.97 REMARK 500 LYS A 146 45.13 -73.56 REMARK 500 GLN A 171 52.51 -95.11 REMARK 500 ARG A 173 -68.62 -131.83 REMARK 500 SER A 203 52.37 -112.85 REMARK 500 VAL B 86 -167.00 -109.76 REMARK 500 ASN B 88 -158.57 -145.53 REMARK 500 LYS B 89 153.96 53.63 REMARK 500 ALA B 94 -167.30 -70.56 REMARK 500 GLU B 130 -166.39 -104.18 REMARK 500 LYS B 146 47.21 -69.75 REMARK 500 ARG B 157 -54.09 -123.36 REMARK 500 GLN B 171 55.62 -95.55 REMARK 500 ARG B 173 -68.86 -134.44 REMARK 500 THR B 201 -95.36 -108.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG B 303 DBREF 5C14 A 1 202 UNP P16284 PECA1_HUMAN 28 229 DBREF 5C14 B 1 202 UNP P16284 PECA1_HUMAN 28 229 SEQADV 5C14 ARG A -1 UNP P16284 EXPRESSION TAG SEQADV 5C14 SER A 0 UNP P16284 EXPRESSION TAG SEQADV 5C14 SER A 203 UNP P16284 EXPRESSION TAG SEQADV 5C14 ARG A 204 UNP P16284 EXPRESSION TAG SEQADV 5C14 GLU A 205 UNP P16284 EXPRESSION TAG SEQADV 5C14 ASN A 206 UNP P16284 EXPRESSION TAG SEQADV 5C14 LEU A 207 UNP P16284 EXPRESSION TAG SEQADV 5C14 TYR A 208 UNP P16284 EXPRESSION TAG SEQADV 5C14 PHE A 209 UNP P16284 EXPRESSION TAG SEQADV 5C14 GLN A 210 UNP P16284 EXPRESSION TAG SEQADV 5C14 ARG B -1 UNP P16284 EXPRESSION TAG SEQADV 5C14 SER B 0 UNP P16284 EXPRESSION TAG SEQADV 5C14 SER B 203 UNP P16284 EXPRESSION TAG SEQADV 5C14 ARG B 204 UNP P16284 EXPRESSION TAG SEQADV 5C14 GLU B 205 UNP P16284 EXPRESSION TAG SEQADV 5C14 ASN B 206 UNP P16284 EXPRESSION TAG SEQADV 5C14 LEU B 207 UNP P16284 EXPRESSION TAG SEQADV 5C14 TYR B 208 UNP P16284 EXPRESSION TAG SEQADV 5C14 PHE B 209 UNP P16284 EXPRESSION TAG SEQADV 5C14 GLN B 210 UNP P16284 EXPRESSION TAG SEQRES 1 A 212 ARG SER GLN GLU ASN SER PHE THR ILE ASN SER VAL ASP SEQRES 2 A 212 MSE LYS SER LEU PRO ASP TRP THR VAL GLN ASN GLY LYS SEQRES 3 A 212 ASN LEU THR LEU GLN CYS PHE ALA ASP VAL SER THR THR SEQRES 4 A 212 SER HIS VAL LYS PRO GLN HIS GLN MET LEU PHE TYR LYS SEQRES 5 A 212 ASP ASP VAL LEU PHE TYR ASN ILE SER SER MET LYS SER SEQRES 6 A 212 THR GLU SER TYR PHE ILE PRO GLU VAL ARG ILE TYR ASP SEQRES 7 A 212 SER GLY THR TYR LYS CYS THR VAL ILE VAL ASN ASN LYS SEQRES 8 A 212 GLU LYS THR THR ALA GLU TYR GLN LEU LEU VAL GLU GLY SEQRES 9 A 212 VAL PRO SER PRO ARG VAL THR LEU ASP LYS LYS GLU ALA SEQRES 10 A 212 ILE GLN GLY GLY ILE VAL ARG VAL ASN CYS SER VAL PRO SEQRES 11 A 212 GLU GLU LYS ALA PRO ILE HIS PHE THR ILE GLU LYS LEU SEQRES 12 A 212 GLU LEU ASN GLU LYS MET VAL LYS LEU LYS ARG GLU LYS SEQRES 13 A 212 ASN SER ARG ASP GLN ASN PHE VAL ILE LEU GLU PHE PRO SEQRES 14 A 212 VAL GLU GLU GLN ASP ARG VAL LEU SER PHE ARG CYS GLN SEQRES 15 A 212 ALA ARG ILE ILE SER GLY ILE HIS MET GLN THR SER GLU SEQRES 16 A 212 SER THR LYS SER GLU LEU VAL THR VAL SER ARG GLU ASN SEQRES 17 A 212 LEU TYR PHE GLN SEQRES 1 B 212 ARG SER GLN GLU ASN SER PHE THR ILE ASN SER VAL ASP SEQRES 2 B 212 MET LYS SER LEU PRO ASP TRP THR VAL GLN ASN GLY LYS SEQRES 3 B 212 ASN LEU THR LEU GLN CYS PHE ALA ASP VAL SER THR THR SEQRES 4 B 212 SER HIS VAL LYS PRO GLN HIS GLN MET LEU PHE TYR LYS SEQRES 5 B 212 ASP ASP VAL LEU PHE TYR ASN ILE SER SER MET LYS SER SEQRES 6 B 212 THR GLU SER TYR PHE ILE PRO GLU VAL ARG ILE TYR ASP SEQRES 7 B 212 SER GLY THR TYR LYS CYS THR VAL ILE VAL ASN ASN LYS SEQRES 8 B 212 GLU LYS THR THR ALA GLU TYR GLN LEU LEU VAL GLU GLY SEQRES 9 B 212 VAL PRO SER PRO ARG VAL THR LEU ASP LYS LYS GLU ALA SEQRES 10 B 212 ILE GLN GLY GLY ILE VAL ARG VAL ASN CYS SER VAL PRO SEQRES 11 B 212 GLU GLU LYS ALA PRO ILE HIS PHE THR ILE GLU LYS LEU SEQRES 12 B 212 GLU LEU ASN GLU LYS MET VAL LYS LEU LYS ARG GLU LYS SEQRES 13 B 212 ASN SER ARG ASP GLN ASN PHE VAL ILE LEU GLU PHE PRO SEQRES 14 B 212 VAL GLU GLU GLN ASP ARG VAL LEU SER PHE ARG CYS GLN SEQRES 15 B 212 ALA ARG ILE ILE SER GLY ILE HIS MET GLN THR SER GLU SEQRES 16 B 212 SER THR LYS SER GLU LEU VAL THR VAL SER ARG GLU ASN SEQRES 17 B 212 LEU TYR PHE GLN MODRES 5C14 MSE A 12 MET MODIFIED RESIDUE HET MSE A 12 8 HET GOL A 301 6 HET GOL A 302 6 HET GOL A 303 6 HET CU A 304 1 HET NAG A 305 14 HET NAG A 306 14 HET NAG A 307 14 HET TRS A 308 8 HET GOL B 301 6 HET GOL B 302 6 HET NAG B 303 14 HET NAG B 304 14 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM CU COPPER (II) ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN TRS TRIS BUFFER FORMUL 1 MSE C5 H11 N O2 SE FORMUL 3 GOL 5(C3 H8 O3) FORMUL 6 CU CU 2+ FORMUL 7 NAG 5(C8 H15 N O6) FORMUL 10 TRS C4 H12 N O3 1+ FORMUL 15 HOH *27(H2 O) HELIX 1 AA1 ARG A 73 SER A 77 5 5 SHEET 1 AA1 3 PHE A 5 LEU A 15 0 SHEET 2 AA1 3 LEU A 26 THR A 36 -1 O THR A 27 N LEU A 15 SHEET 3 AA1 3 THR A 64 ILE A 69 -1 O ILE A 69 N LEU A 26 SHEET 1 AA2 5 THR A 19 GLN A 21 0 SHEET 2 AA2 5 TYR A 96 GLU A 101 1 O GLU A 101 N VAL A 20 SHEET 3 AA2 5 GLY A 78 ILE A 85 -1 N TYR A 80 O TYR A 96 SHEET 4 AA2 5 HIS A 44 LYS A 50 -1 N TYR A 49 O LYS A 81 SHEET 5 AA2 5 VAL A 53 SER A 60 -1 O PHE A 55 N PHE A 48 SHEET 1 AA3 4 THR A 19 GLN A 21 0 SHEET 2 AA3 4 TYR A 96 GLU A 101 1 O GLU A 101 N VAL A 20 SHEET 3 AA3 4 GLY A 78 ILE A 85 -1 N TYR A 80 O TYR A 96 SHEET 4 AA3 4 LYS A 91 THR A 92 -1 O LYS A 91 N VAL A 84 SHEET 1 AA4 3 ARG A 107 LEU A 110 0 SHEET 2 AA4 3 ILE A 120 SER A 126 -1 O ASN A 124 N THR A 109 SHEET 3 AA4 3 PHE A 161 PRO A 167 -1 O PHE A 166 N VAL A 121 SHEET 1 AA5 7 VAL A 148 ASN A 155 0 SHEET 2 AA5 7 ILE A 134 GLU A 142 -1 N PHE A 136 O LYS A 154 SHEET 3 AA5 7 VAL A 174 THR A 191 -1 O SER A 176 N LEU A 141 SHEET 4 AA5 7 LEU B 199 VAL B 200 -1 O LEU B 199 N LEU A 175 SHEET 5 AA5 7 VAL A 174 THR A 191 -1 N LEU A 175 O LEU B 199 SHEET 6 AA5 7 VAL B 174 THR B 191 -1 O HIS B 188 N GLY A 186 SHEET 7 AA5 7 THR A 195 LYS A 196 -1 N THR A 195 O CYS B 179 SHEET 1 AA6 4 VAL B 148 ASN B 155 0 SHEET 2 AA6 4 HIS B 135 GLU B 142 -1 N PHE B 136 O LYS B 154 SHEET 3 AA6 4 VAL B 174 THR B 191 -1 O ARG B 178 N GLU B 139 SHEET 4 AA6 4 VAL A 200 THR A 201 -1 N VAL A 200 O LEU B 175 SHEET 1 AA7 3 THR B 6 LEU B 15 0 SHEET 2 AA7 3 LEU B 26 SER B 35 -1 O GLN B 29 N LYS B 13 SHEET 3 AA7 3 GLU B 65 ILE B 69 -1 O TYR B 67 N LEU B 28 SHEET 1 AA8 5 THR B 19 GLN B 21 0 SHEET 2 AA8 5 TYR B 96 GLU B 101 1 O GLU B 101 N VAL B 20 SHEET 3 AA8 5 GLY B 78 ILE B 85 -1 N TYR B 80 O TYR B 96 SHEET 4 AA8 5 HIS B 44 LYS B 50 -1 N LEU B 47 O THR B 83 SHEET 5 AA8 5 VAL B 53 SER B 60 -1 O TYR B 56 N PHE B 48 SHEET 1 AA9 4 THR B 19 GLN B 21 0 SHEET 2 AA9 4 TYR B 96 GLU B 101 1 O GLU B 101 N VAL B 20 SHEET 3 AA9 4 GLY B 78 ILE B 85 -1 N TYR B 80 O TYR B 96 SHEET 4 AA9 4 GLU B 90 THR B 92 -1 O LYS B 91 N VAL B 84 SHEET 1 AB1 3 ARG B 107 LEU B 110 0 SHEET 2 AB1 3 ILE B 120 SER B 126 -1 O ASN B 124 N THR B 109 SHEET 3 AB1 3 PHE B 161 PRO B 167 -1 O PHE B 166 N VAL B 121 SSBOND 1 CYS A 30 CYS A 82 1555 1555 2.02 SSBOND 2 CYS A 125 CYS A 179 1555 1555 2.00 SSBOND 3 CYS B 30 CYS B 82 1555 1555 2.02 SSBOND 4 CYS B 125 CYS B 179 1555 1555 2.04 LINK C ASP A 11 N MSE A 12 1555 1555 1.33 LINK C MSE A 12 N LYS A 13 1555 1555 1.32 LINK ND2 ASN A 25 C1 NAG A 305 1555 1555 1.35 LINK ND2 ASN A 57 C1 NAG A 306 1555 1555 1.35 LINK ND2 ASN A 124 C1 NAG A 307 1555 1555 1.24 LINK ND2 ASN B 57 C1 NAG B 304 1555 1555 1.23 CISPEP 1 LEU A 15 PRO A 16 0 9.72 CISPEP 2 ALA A 132 PRO A 133 0 4.48 CISPEP 3 LEU B 15 PRO B 16 0 11.54 CISPEP 4 ALA B 132 PRO B 133 0 0.84 CRYST1 104.010 104.010 281.834 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009614 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009614 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003548 0.00000