HEADER LIGASE 15-JUN-15 5C1P TITLE CRYSTAL STRUCTURE OF ADP AND D-ALANYL-D-ALANINE COMPLEXED D-ALANINE-D- TITLE 2 ALANINE LIGASE(DDL) FROM YERSINIA PESTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-ALANINE--D-ALANINE LIGASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: D-ALA-D-ALA LIGASE,D-ALANYLALANINE SYNTHETASE; COMPND 5 EC: 6.3.2.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 632; SOURCE 4 GENE: DDL, DDLB, YPO0557, Y3624, YP_3627; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21-GOLD(DE3)PLYSS AG; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3)PLYSS AG KEYWDS D-ALANINE-D-ALANINE LIGASE, DDL, DRUG TARGET, BACTERIAL CELL WALL KEYWDS 2 SYNTHESIS, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR H.T.TRAN,L.W.KANG,M.K.HONG,H.P.T.NGO REVDAT 2 20-MAR-24 5C1P 1 REMARK LINK REVDAT 1 02-MAR-16 5C1P 0 JRNL AUTH H.T.TRAN,M.K.HONG,H.P.NGO,K.H.HUYNH,Y.J.AHN,Z.WANG,L.W.KANG JRNL TITL STRUCTURE OF D-ALANINE-D-ALANINE LIGASE FROM YERSINIA JRNL TITL 2 PESTIS: NUCLEOTIDE PHOSPHATE RECOGNITION BY THE SERINE LOOP. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 72 12 2016 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 26894530 JRNL DOI 10.1107/S2059798315021671 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 53293 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2846 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3855 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 193 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9108 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 143 REMARK 3 SOLVENT ATOMS : 218 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.377 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.241 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.163 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.019 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9440 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 9049 ; 0.008 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12780 ; 1.617 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): 20863 ; 1.319 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1188 ; 5.911 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 381 ;36.887 ;24.987 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1572 ;15.527 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;20.547 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1465 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10551 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1998 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4779 ; 3.638 ; 4.124 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4778 ; 3.636 ; 4.124 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5955 ; 5.319 ; 6.169 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 5956 ; 5.319 ; 6.170 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4661 ; 4.799 ; 4.831 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4660 ; 4.798 ; 4.832 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6822 ; 7.266 ; 7.012 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 10305 ; 9.279 ;33.719 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 10302 ; 9.280 ;33.724 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 306 B 1 306 17106 0.09 0.05 REMARK 3 2 A 1 306 C 1 306 17127 0.10 0.05 REMARK 3 3 A 2 306 D 2 306 17109 0.09 0.05 REMARK 3 4 B 1 306 C 1 306 17598 0.10 0.05 REMARK 3 5 B 2 306 D 2 306 17454 0.10 0.05 REMARK 3 6 C 2 306 D 2 306 17793 0.11 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5C1P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210609. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.997 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56216 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: ORTHORHOMBIC SHAPED CRYSTAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM ACETATE, 0.1M RIS PH7.0, REMARK 280 29% PEG 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.33500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.55150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.27250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 105.55150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.33500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.27250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 148 REMARK 465 GLY A 149 REMARK 465 SER A 150 REMARK 465 PRO A 206 REMARK 465 GLY A 207 REMARK 465 VAL A 208 REMARK 465 PHE A 209 REMARK 465 TYR A 210 REMARK 465 ASP A 211 REMARK 465 TYR A 212 REMARK 465 ASP A 213 REMARK 465 ALA A 214 REMARK 465 LYS A 215 REMARK 465 TYR A 216 REMARK 465 LEU A 217 REMARK 465 SER A 218 REMARK 465 ASP A 219 REMARK 465 GLU B 148 REMARK 465 GLY B 149 REMARK 465 SER B 150 REMARK 465 SER B 151 REMARK 465 TYR B 216 REMARK 465 LEU B 217 REMARK 465 SER B 218 REMARK 465 ASP B 219 REMARK 465 MET D 1 REMARK 465 GLY D 149 REMARK 465 SER D 150 REMARK 465 SER D 151 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA D 214 OG1 THR D 221 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 263 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 128 -51.49 136.11 REMARK 500 GLU C 148 129.29 -35.27 REMARK 500 GLN D 172 -26.65 110.33 REMARK 500 ASP D 211 -169.24 -122.31 REMARK 500 ASP D 219 -3.42 80.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU D 217 SER D 218 -148.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 68 O REMARK 620 2 SER A 91 O 77.8 REMARK 620 3 THR A 94 OG1 154.1 77.0 REMARK 620 4 THR A 273 OG1 85.0 115.8 100.5 REMARK 620 5 HOH A 517 O 106.3 161.7 99.6 82.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 68 O REMARK 620 2 SER B 91 O 79.0 REMARK 620 3 THR B 94 OG1 156.0 77.0 REMARK 620 4 THR B 273 OG1 89.9 122.4 101.4 REMARK 620 5 HOH B 512 O 108.8 150.8 93.2 86.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 68 O REMARK 620 2 SER C 91 O 78.2 REMARK 620 3 THR C 94 OG1 154.6 76.4 REMARK 620 4 THR C 273 OG1 90.1 121.4 102.1 REMARK 620 5 HOH C 543 O 113.6 157.4 90.8 79.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 404 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 68 O REMARK 620 2 SER D 91 O 76.7 REMARK 620 3 THR D 94 OG1 152.0 76.2 REMARK 620 4 THR D 273 OG1 85.5 115.4 99.9 REMARK 620 5 HOH D 508 O 110.9 159.3 97.1 84.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA D 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide DAL D 402 and DAL D REMARK 800 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5C1P RELATED DB: PDB DBREF 5C1P A 1 306 UNP Q8ZIE7 DDL_YERPE 1 306 DBREF 5C1P B 1 306 UNP Q8ZIE7 DDL_YERPE 1 306 DBREF 5C1P C 1 306 UNP Q8ZIE7 DDL_YERPE 1 306 DBREF 5C1P D 1 306 UNP Q8ZIE7 DDL_YERPE 1 306 SEQRES 1 A 306 MET ALA GLU LYS VAL ALA VAL LEU LEU GLY GLY THR SER SEQRES 2 A 306 ALA GLU ARG GLU VAL SER LEU LEU SER GLY GLN ALA VAL SEQRES 3 A 306 LEU ALA GLY LEU LYS GLU ALA GLY ILE ASP ALA TYR GLY SEQRES 4 A 306 VAL ASP THR LYS ASP PHE PRO VAL THR GLN LEU LYS GLU SEQRES 5 A 306 GLN GLY PHE ASP LYS VAL PHE ILE ALA LEU HIS GLY ARG SEQRES 6 A 306 GLY GLY GLU ASP GLY THR LEU GLN GLY VAL LEU GLU PHE SEQRES 7 A 306 LEU GLN LEU PRO TYR THR GLY SER GLY VAL MET ALA SER SEQRES 8 A 306 ALA LEU THR MET ASP LYS LEU ARG THR LYS LEU VAL TRP SEQRES 9 A 306 GLN ALA LEU GLY LEU PRO ILE SER PRO TYR VAL ALA LEU SEQRES 10 A 306 ASN ARG GLN GLN PHE GLU THR LEU SER PRO GLU GLU LEU SEQRES 11 A 306 VAL ALA CYS VAL ALA LYS LEU GLY LEU PRO LEU ILE VAL SEQRES 12 A 306 LYS PRO SER HIS GLU GLY SER SER VAL GLY MET SER LYS SEQRES 13 A 306 VAL ASP HIS ALA SER GLU LEU GLN LYS ALA LEU VAL GLU SEQRES 14 A 306 ALA PHE GLN HIS ASP SER ASP VAL LEU ILE GLU LYS TRP SEQRES 15 A 306 LEU SER GLY PRO GLU PHE THR VAL ALA ILE LEU GLY ASP SEQRES 16 A 306 GLU VAL LEU PRO SER ILE ARG ILE GLN PRO PRO GLY VAL SEQRES 17 A 306 PHE TYR ASP TYR ASP ALA LYS TYR LEU SER ASP LYS THR SEQRES 18 A 306 GLN TYR PHE CYS PRO SER GLY LEU SER ASP GLU SER GLU SEQRES 19 A 306 GLN GLN LEU ALA ALA LEU ALA LEU GLN ALA TYR HIS ALA SEQRES 20 A 306 LEU ASP CYS SER GLY TRP GLY ARG VAL ASP VAL MET GLN SEQRES 21 A 306 ASP ARG ASP GLY HIS PHE TYR LEU LEU GLU VAL ASN THR SEQRES 22 A 306 SER PRO GLY MET THR SER HIS SER LEU VAL PRO MET ALA SEQRES 23 A 306 ALA ARG GLN TYR GLY LEU SER PHE SER GLN LEU VAL ALA SEQRES 24 A 306 ARG ILE LEU MET LEU ALA ASP SEQRES 1 B 306 MET ALA GLU LYS VAL ALA VAL LEU LEU GLY GLY THR SER SEQRES 2 B 306 ALA GLU ARG GLU VAL SER LEU LEU SER GLY GLN ALA VAL SEQRES 3 B 306 LEU ALA GLY LEU LYS GLU ALA GLY ILE ASP ALA TYR GLY SEQRES 4 B 306 VAL ASP THR LYS ASP PHE PRO VAL THR GLN LEU LYS GLU SEQRES 5 B 306 GLN GLY PHE ASP LYS VAL PHE ILE ALA LEU HIS GLY ARG SEQRES 6 B 306 GLY GLY GLU ASP GLY THR LEU GLN GLY VAL LEU GLU PHE SEQRES 7 B 306 LEU GLN LEU PRO TYR THR GLY SER GLY VAL MET ALA SER SEQRES 8 B 306 ALA LEU THR MET ASP LYS LEU ARG THR LYS LEU VAL TRP SEQRES 9 B 306 GLN ALA LEU GLY LEU PRO ILE SER PRO TYR VAL ALA LEU SEQRES 10 B 306 ASN ARG GLN GLN PHE GLU THR LEU SER PRO GLU GLU LEU SEQRES 11 B 306 VAL ALA CYS VAL ALA LYS LEU GLY LEU PRO LEU ILE VAL SEQRES 12 B 306 LYS PRO SER HIS GLU GLY SER SER VAL GLY MET SER LYS SEQRES 13 B 306 VAL ASP HIS ALA SER GLU LEU GLN LYS ALA LEU VAL GLU SEQRES 14 B 306 ALA PHE GLN HIS ASP SER ASP VAL LEU ILE GLU LYS TRP SEQRES 15 B 306 LEU SER GLY PRO GLU PHE THR VAL ALA ILE LEU GLY ASP SEQRES 16 B 306 GLU VAL LEU PRO SER ILE ARG ILE GLN PRO PRO GLY VAL SEQRES 17 B 306 PHE TYR ASP TYR ASP ALA LYS TYR LEU SER ASP LYS THR SEQRES 18 B 306 GLN TYR PHE CYS PRO SER GLY LEU SER ASP GLU SER GLU SEQRES 19 B 306 GLN GLN LEU ALA ALA LEU ALA LEU GLN ALA TYR HIS ALA SEQRES 20 B 306 LEU ASP CYS SER GLY TRP GLY ARG VAL ASP VAL MET GLN SEQRES 21 B 306 ASP ARG ASP GLY HIS PHE TYR LEU LEU GLU VAL ASN THR SEQRES 22 B 306 SER PRO GLY MET THR SER HIS SER LEU VAL PRO MET ALA SEQRES 23 B 306 ALA ARG GLN TYR GLY LEU SER PHE SER GLN LEU VAL ALA SEQRES 24 B 306 ARG ILE LEU MET LEU ALA ASP SEQRES 1 C 306 MET ALA GLU LYS VAL ALA VAL LEU LEU GLY GLY THR SER SEQRES 2 C 306 ALA GLU ARG GLU VAL SER LEU LEU SER GLY GLN ALA VAL SEQRES 3 C 306 LEU ALA GLY LEU LYS GLU ALA GLY ILE ASP ALA TYR GLY SEQRES 4 C 306 VAL ASP THR LYS ASP PHE PRO VAL THR GLN LEU LYS GLU SEQRES 5 C 306 GLN GLY PHE ASP LYS VAL PHE ILE ALA LEU HIS GLY ARG SEQRES 6 C 306 GLY GLY GLU ASP GLY THR LEU GLN GLY VAL LEU GLU PHE SEQRES 7 C 306 LEU GLN LEU PRO TYR THR GLY SER GLY VAL MET ALA SER SEQRES 8 C 306 ALA LEU THR MET ASP LYS LEU ARG THR LYS LEU VAL TRP SEQRES 9 C 306 GLN ALA LEU GLY LEU PRO ILE SER PRO TYR VAL ALA LEU SEQRES 10 C 306 ASN ARG GLN GLN PHE GLU THR LEU SER PRO GLU GLU LEU SEQRES 11 C 306 VAL ALA CYS VAL ALA LYS LEU GLY LEU PRO LEU ILE VAL SEQRES 12 C 306 LYS PRO SER HIS GLU GLY SER SER VAL GLY MET SER LYS SEQRES 13 C 306 VAL ASP HIS ALA SER GLU LEU GLN LYS ALA LEU VAL GLU SEQRES 14 C 306 ALA PHE GLN HIS ASP SER ASP VAL LEU ILE GLU LYS TRP SEQRES 15 C 306 LEU SER GLY PRO GLU PHE THR VAL ALA ILE LEU GLY ASP SEQRES 16 C 306 GLU VAL LEU PRO SER ILE ARG ILE GLN PRO PRO GLY VAL SEQRES 17 C 306 PHE TYR ASP TYR ASP ALA LYS TYR LEU SER ASP LYS THR SEQRES 18 C 306 GLN TYR PHE CYS PRO SER GLY LEU SER ASP GLU SER GLU SEQRES 19 C 306 GLN GLN LEU ALA ALA LEU ALA LEU GLN ALA TYR HIS ALA SEQRES 20 C 306 LEU ASP CYS SER GLY TRP GLY ARG VAL ASP VAL MET GLN SEQRES 21 C 306 ASP ARG ASP GLY HIS PHE TYR LEU LEU GLU VAL ASN THR SEQRES 22 C 306 SER PRO GLY MET THR SER HIS SER LEU VAL PRO MET ALA SEQRES 23 C 306 ALA ARG GLN TYR GLY LEU SER PHE SER GLN LEU VAL ALA SEQRES 24 C 306 ARG ILE LEU MET LEU ALA ASP SEQRES 1 D 306 MET ALA GLU LYS VAL ALA VAL LEU LEU GLY GLY THR SER SEQRES 2 D 306 ALA GLU ARG GLU VAL SER LEU LEU SER GLY GLN ALA VAL SEQRES 3 D 306 LEU ALA GLY LEU LYS GLU ALA GLY ILE ASP ALA TYR GLY SEQRES 4 D 306 VAL ASP THR LYS ASP PHE PRO VAL THR GLN LEU LYS GLU SEQRES 5 D 306 GLN GLY PHE ASP LYS VAL PHE ILE ALA LEU HIS GLY ARG SEQRES 6 D 306 GLY GLY GLU ASP GLY THR LEU GLN GLY VAL LEU GLU PHE SEQRES 7 D 306 LEU GLN LEU PRO TYR THR GLY SER GLY VAL MET ALA SER SEQRES 8 D 306 ALA LEU THR MET ASP LYS LEU ARG THR LYS LEU VAL TRP SEQRES 9 D 306 GLN ALA LEU GLY LEU PRO ILE SER PRO TYR VAL ALA LEU SEQRES 10 D 306 ASN ARG GLN GLN PHE GLU THR LEU SER PRO GLU GLU LEU SEQRES 11 D 306 VAL ALA CYS VAL ALA LYS LEU GLY LEU PRO LEU ILE VAL SEQRES 12 D 306 LYS PRO SER HIS GLU GLY SER SER VAL GLY MET SER LYS SEQRES 13 D 306 VAL ASP HIS ALA SER GLU LEU GLN LYS ALA LEU VAL GLU SEQRES 14 D 306 ALA PHE GLN HIS ASP SER ASP VAL LEU ILE GLU LYS TRP SEQRES 15 D 306 LEU SER GLY PRO GLU PHE THR VAL ALA ILE LEU GLY ASP SEQRES 16 D 306 GLU VAL LEU PRO SER ILE ARG ILE GLN PRO PRO GLY VAL SEQRES 17 D 306 PHE TYR ASP TYR ASP ALA LYS TYR LEU SER ASP LYS THR SEQRES 18 D 306 GLN TYR PHE CYS PRO SER GLY LEU SER ASP GLU SER GLU SEQRES 19 D 306 GLN GLN LEU ALA ALA LEU ALA LEU GLN ALA TYR HIS ALA SEQRES 20 D 306 LEU ASP CYS SER GLY TRP GLY ARG VAL ASP VAL MET GLN SEQRES 21 D 306 ASP ARG ASP GLY HIS PHE TYR LEU LEU GLU VAL ASN THR SEQRES 22 D 306 SER PRO GLY MET THR SER HIS SER LEU VAL PRO MET ALA SEQRES 23 D 306 ALA ARG GLN TYR GLY LEU SER PHE SER GLN LEU VAL ALA SEQRES 24 D 306 ARG ILE LEU MET LEU ALA ASP HET NA A 401 1 HET GOL A 402 6 HET GOL A 403 6 HET ADP B 401 27 HET NA B 402 1 HET GOL B 403 6 HET ADP C 401 27 HET NA C 402 1 HET ACT C 403 4 HET GOL C 404 6 HET GOL C 405 6 HET GOL C 406 6 HET GOL C 407 6 HET NA C 408 1 HET ADP D 401 27 HET DAL D 402 5 HET DAL D 403 6 HET NA D 404 1 HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM ACT ACETATE ION HETNAM DAL D-ALANINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 NA 5(NA 1+) FORMUL 6 GOL 7(C3 H8 O3) FORMUL 8 ADP 3(C10 H15 N5 O10 P2) FORMUL 13 ACT C2 H3 O2 1- FORMUL 20 DAL 2(C3 H7 N O2) FORMUL 23 HOH *218(H2 O) HELIX 1 AA1 GLU A 15 ALA A 33 1 19 HELIX 2 AA2 PRO A 46 LEU A 50 5 5 HELIX 3 AA3 GLY A 70 GLN A 80 1 11 HELIX 4 AA4 GLY A 87 THR A 94 1 8 HELIX 5 AA5 ASP A 96 LEU A 107 1 12 HELIX 6 AA6 ARG A 119 LEU A 125 1 7 HELIX 7 AA7 SER A 126 ALA A 135 1 10 HELIX 8 AA8 LYS A 136 GLY A 138 5 3 HELIX 9 AA9 HIS A 159 SER A 161 5 3 HELIX 10 AB1 GLU A 162 GLN A 172 1 11 HELIX 11 AB2 SER A 230 LEU A 248 1 19 HELIX 12 AB3 SER A 281 GLY A 291 1 11 HELIX 13 AB4 SER A 293 LEU A 304 1 12 HELIX 14 AB5 GLU B 15 ALA B 33 1 19 HELIX 15 AB6 PRO B 46 LEU B 50 5 5 HELIX 16 AB7 GLY B 70 GLN B 80 1 11 HELIX 17 AB8 GLY B 87 THR B 94 1 8 HELIX 18 AB9 ASP B 96 LEU B 107 1 12 HELIX 19 AC1 ARG B 119 THR B 124 1 6 HELIX 20 AC2 GLU B 128 ALA B 135 1 8 HELIX 21 AC3 LYS B 136 GLY B 138 5 3 HELIX 22 AC4 HIS B 159 SER B 161 5 3 HELIX 23 AC5 GLU B 162 PHE B 171 1 10 HELIX 24 AC6 SER B 230 LEU B 248 1 19 HELIX 25 AC7 SER B 281 GLY B 291 1 11 HELIX 26 AC8 SER B 293 LEU B 304 1 12 HELIX 27 AC9 GLU C 15 ALA C 33 1 19 HELIX 28 AD1 PRO C 46 LEU C 50 5 5 HELIX 29 AD2 GLY C 70 GLN C 80 1 11 HELIX 30 AD3 GLY C 87 THR C 94 1 8 HELIX 31 AD4 ASP C 96 LEU C 107 1 12 HELIX 32 AD5 ARG C 119 LEU C 125 1 7 HELIX 33 AD6 SER C 126 ALA C 135 1 10 HELIX 34 AD7 LYS C 136 GLY C 138 5 3 HELIX 35 AD8 HIS C 159 SER C 161 5 3 HELIX 36 AD9 GLU C 162 GLN C 172 1 11 HELIX 37 AE1 ASP C 211 LEU C 217 1 7 HELIX 38 AE2 SER C 230 LEU C 248 1 19 HELIX 39 AE3 SER C 281 GLY C 291 1 11 HELIX 40 AE4 SER C 293 LEU C 304 1 12 HELIX 41 AE5 GLU D 15 ALA D 33 1 19 HELIX 42 AE6 PRO D 46 LEU D 50 5 5 HELIX 43 AE7 GLY D 70 GLN D 80 1 11 HELIX 44 AE8 GLY D 87 THR D 94 1 8 HELIX 45 AE9 ASP D 96 LEU D 107 1 12 HELIX 46 AF1 ARG D 119 LEU D 125 1 7 HELIX 47 AF2 SER D 126 ALA D 135 1 10 HELIX 48 AF3 LYS D 136 GLY D 138 5 3 HELIX 49 AF4 HIS D 159 SER D 161 5 3 HELIX 50 AF5 GLU D 162 PHE D 171 1 10 HELIX 51 AF6 ASP D 211 LEU D 217 1 7 HELIX 52 AF7 SER D 230 LEU D 248 1 19 HELIX 53 AF8 SER D 281 GLY D 291 1 11 HELIX 54 AF9 SER D 293 LEU D 304 1 12 SHEET 1 AA1 3 ALA A 37 ASP A 41 0 SHEET 2 AA1 3 VAL A 5 LEU A 9 1 N VAL A 7 O TYR A 38 SHEET 3 AA1 3 LYS A 57 ILE A 60 1 O PHE A 59 N ALA A 6 SHEET 1 AA2 4 TYR A 114 ASN A 118 0 SHEET 2 AA2 4 ASP A 176 LYS A 181 -1 O ILE A 179 N VAL A 115 SHEET 3 AA2 4 LEU A 141 PRO A 145 -1 N LYS A 144 O LEU A 178 SHEET 4 AA2 4 SER A 155 VAL A 157 -1 O VAL A 157 N LEU A 141 SHEET 1 AA3 4 GLU A 196 VAL A 197 0 SHEET 2 AA3 4 GLU A 187 LEU A 193 -1 N LEU A 193 O GLU A 196 SHEET 3 AA3 4 ILE A 201 GLN A 204 -1 O ILE A 203 N GLU A 187 SHEET 4 AA3 4 GLN A 222 PHE A 224 -1 O GLN A 222 N GLN A 204 SHEET 1 AA4 4 GLU A 196 VAL A 197 0 SHEET 2 AA4 4 GLU A 187 LEU A 193 -1 N LEU A 193 O GLU A 196 SHEET 3 AA4 4 TRP A 253 GLN A 260 -1 O VAL A 258 N PHE A 188 SHEET 4 AA4 4 PHE A 266 ASN A 272 -1 O LEU A 269 N ASP A 257 SHEET 1 AA5 3 ASP B 36 ASP B 41 0 SHEET 2 AA5 3 LYS B 4 LEU B 9 1 N VAL B 7 O TYR B 38 SHEET 3 AA5 3 LYS B 57 ILE B 60 1 O PHE B 59 N ALA B 6 SHEET 1 AA6 4 TYR B 114 ASN B 118 0 SHEET 2 AA6 4 ASP B 176 LYS B 181 -1 O ILE B 179 N VAL B 115 SHEET 3 AA6 4 LEU B 141 PRO B 145 -1 N LYS B 144 O LEU B 178 SHEET 4 AA6 4 SER B 155 VAL B 157 -1 O VAL B 157 N LEU B 141 SHEET 1 AA7 4 GLU B 196 VAL B 197 0 SHEET 2 AA7 4 GLU B 187 LEU B 193 -1 N LEU B 193 O GLU B 196 SHEET 3 AA7 4 ILE B 201 GLN B 204 -1 O ILE B 203 N GLU B 187 SHEET 4 AA7 4 GLN B 222 PHE B 224 -1 O GLN B 222 N GLN B 204 SHEET 1 AA8 4 GLU B 196 VAL B 197 0 SHEET 2 AA8 4 GLU B 187 LEU B 193 -1 N LEU B 193 O GLU B 196 SHEET 3 AA8 4 TRP B 253 GLN B 260 -1 O VAL B 256 N VAL B 190 SHEET 4 AA8 4 PHE B 266 ASN B 272 -1 O LEU B 269 N ASP B 257 SHEET 1 AA9 3 ALA C 37 ASP C 41 0 SHEET 2 AA9 3 VAL C 5 LEU C 9 1 N VAL C 7 O TYR C 38 SHEET 3 AA9 3 LYS C 57 ILE C 60 1 O PHE C 59 N ALA C 6 SHEET 1 AB1 4 TYR C 114 ASN C 118 0 SHEET 2 AB1 4 ASP C 176 LYS C 181 -1 O ILE C 179 N VAL C 115 SHEET 3 AB1 4 LEU C 141 PRO C 145 -1 N LYS C 144 O LEU C 178 SHEET 4 AB1 4 SER C 155 VAL C 157 -1 O VAL C 157 N LEU C 141 SHEET 1 AB2 4 GLU C 196 VAL C 197 0 SHEET 2 AB2 4 GLU C 187 LEU C 193 -1 N LEU C 193 O GLU C 196 SHEET 3 AB2 4 ILE C 201 GLN C 204 -1 O ILE C 203 N GLU C 187 SHEET 4 AB2 4 GLN C 222 PHE C 224 -1 O GLN C 222 N GLN C 204 SHEET 1 AB3 4 GLU C 196 VAL C 197 0 SHEET 2 AB3 4 GLU C 187 LEU C 193 -1 N LEU C 193 O GLU C 196 SHEET 3 AB3 4 TRP C 253 GLN C 260 -1 O VAL C 258 N PHE C 188 SHEET 4 AB3 4 PHE C 266 ASN C 272 -1 O GLU C 270 N ASP C 257 SHEET 1 AB4 3 ASP D 36 ASP D 41 0 SHEET 2 AB4 3 LYS D 4 LEU D 9 1 N VAL D 7 O TYR D 38 SHEET 3 AB4 3 LYS D 57 ILE D 60 1 O PHE D 59 N ALA D 6 SHEET 1 AB5 4 TYR D 114 ASN D 118 0 SHEET 2 AB5 4 ASP D 176 LYS D 181 -1 O ILE D 179 N VAL D 115 SHEET 3 AB5 4 LEU D 141 PRO D 145 -1 N LYS D 144 O LEU D 178 SHEET 4 AB5 4 SER D 155 VAL D 157 -1 O VAL D 157 N LEU D 141 SHEET 1 AB6 4 GLU D 196 VAL D 197 0 SHEET 2 AB6 4 GLU D 187 LEU D 193 -1 N LEU D 193 O GLU D 196 SHEET 3 AB6 4 ILE D 201 GLN D 204 -1 O ILE D 203 N GLU D 187 SHEET 4 AB6 4 GLN D 222 PHE D 224 -1 O GLN D 222 N GLN D 204 SHEET 1 AB7 4 GLU D 196 VAL D 197 0 SHEET 2 AB7 4 GLU D 187 LEU D 193 -1 N LEU D 193 O GLU D 196 SHEET 3 AB7 4 TRP D 253 GLN D 260 -1 O VAL D 258 N PHE D 188 SHEET 4 AB7 4 PHE D 266 ASN D 272 -1 O LEU D 269 N ASP D 257 LINK C DAL D 402 N DAL D 403 1555 1555 1.33 LINK O GLU A 68 NA NA A 401 1555 1555 2.27 LINK O SER A 91 NA NA A 401 1555 1555 2.32 LINK OG1 THR A 94 NA NA A 401 1555 1555 2.26 LINK OG1 THR A 273 NA NA A 401 1555 1555 2.30 LINK NA NA A 401 O HOH A 517 1555 1555 2.26 LINK O GLU B 68 NA NA B 402 1555 1555 2.21 LINK O SER B 91 NA NA B 402 1555 1555 2.23 LINK OG1 THR B 94 NA NA B 402 1555 1555 2.27 LINK OG1 THR B 273 NA NA B 402 1555 1555 2.22 LINK NA NA B 402 O HOH B 512 1555 1555 2.24 LINK O GLU C 68 NA NA C 402 1555 1555 2.22 LINK O SER C 91 NA NA C 402 1555 1555 2.29 LINK OG1 THR C 94 NA NA C 402 1555 1555 2.29 LINK OG1 THR C 273 NA NA C 402 1555 1555 2.22 LINK NA NA C 402 O HOH C 543 1555 1555 2.30 LINK NA NA C 408 O HOH C 575 1555 1555 2.20 LINK O GLU D 68 NA NA D 404 1555 1555 2.27 LINK O SER D 91 NA NA D 404 1555 1555 2.32 LINK OG1 THR D 94 NA NA D 404 1555 1555 2.27 LINK OG1 THR D 273 NA NA D 404 1555 1555 2.29 LINK NA NA D 404 O HOH D 508 1555 1555 2.29 CISPEP 1 LEU A 139 PRO A 140 0 -5.78 CISPEP 2 GLY A 185 PRO A 186 0 -6.37 CISPEP 3 CYS A 225 PRO A 226 0 3.01 CISPEP 4 LEU B 139 PRO B 140 0 -4.73 CISPEP 5 GLY B 185 PRO B 186 0 -0.11 CISPEP 6 CYS B 225 PRO B 226 0 6.30 CISPEP 7 LEU C 139 PRO C 140 0 -3.26 CISPEP 8 GLY C 185 PRO C 186 0 2.47 CISPEP 9 CYS C 225 PRO C 226 0 2.90 CISPEP 10 LEU D 139 PRO D 140 0 -7.57 CISPEP 11 GLY D 185 PRO D 186 0 -3.45 CISPEP 12 CYS D 225 PRO D 226 0 7.06 SITE 1 AC1 6 GLU A 68 SER A 91 THR A 94 MET A 95 SITE 2 AC1 6 THR A 273 HOH A 517 SITE 1 AC2 4 GLY A 11 THR A 12 THR A 42 GLY A 66 SITE 1 AC3 5 GLU A 77 GLN A 80 LEU A 81 TYR A 83 SITE 2 AC3 5 ASP A 306 SITE 1 AC4 10 LYS B 97 ILE B 142 LYS B 144 GLU B 180 SITE 2 AC4 10 LYS B 181 LEU B 183 GLU B 187 TYR B 210 SITE 3 AC4 10 MET B 259 GLU B 270 SITE 1 AC5 6 GLU B 68 SER B 91 THR B 94 MET B 95 SITE 2 AC5 6 THR B 273 HOH B 512 SITE 1 AC6 4 GLY B 11 THR B 12 THR B 42 GLY B 66 SITE 1 AC7 15 LYS C 97 ILE C 142 LYS C 144 GLU C 148 SITE 2 AC7 15 SER C 151 MET C 154 GLU C 180 LYS C 181 SITE 3 AC7 15 LEU C 183 GLU C 187 PHE C 209 TYR C 210 SITE 4 AC7 15 LYS C 215 MET C 259 GLU C 270 SITE 1 AC8 6 GLU C 68 SER C 91 THR C 94 MET C 95 SITE 2 AC8 6 THR C 273 HOH C 543 SITE 1 AC9 7 ARG C 255 GLY C 276 SER C 281 LEU C 282 SITE 2 AC9 7 HOH C 501 HOH C 519 HOH C 533 SITE 1 AD1 1 ALA C 247 SITE 1 AD2 4 ASP A 306 GLN C 296 ARG C 300 HOH C 547 SITE 1 AD3 5 LEU C 76 GLU C 77 LEU C 81 ASP C 306 SITE 2 AD3 5 GOL C 407 SITE 1 AD4 6 PRO C 82 TYR C 83 GLY C 85 GLY C 87 SITE 2 AD4 6 ASP C 306 GOL C 406 SITE 1 AD5 4 HIS A 265 HOH A 507 HIS C 280 HOH C 575 SITE 1 AD6 14 LYS D 97 ILE D 142 LYS D 144 GLU D 148 SITE 2 AD6 14 GLU D 180 LYS D 181 TRP D 182 LEU D 183 SITE 3 AD6 14 GLU D 187 PHE D 209 TYR D 210 MET D 259 SITE 4 AD6 14 GLU D 270 HOH D 527 SITE 1 AD7 6 GLU D 68 SER D 91 THR D 94 MET D 95 SITE 2 AD7 6 THR D 273 HOH D 508 SITE 1 AD8 11 TYR D 210 LYS D 215 TYR D 216 ARG D 255 SITE 2 AD8 11 ASN D 272 PRO D 275 GLY D 276 SER D 281 SITE 3 AD8 11 LEU D 282 HOH D 505 HOH D 506 CRYST1 62.670 106.545 211.103 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015957 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009386 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004737 0.00000