HEADER HYDROLASE 16-JUN-15 5C2O TITLE CRYSTAL STRUCTURE OF STREPTOCOCCUS MUTANS DEOXYCYTIDYLATE DEAMINASE TITLE 2 COMPLEXED WITH DTTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE DEOXYCYTIDYLATE DEAMINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS MUTANS; SOURCE 3 ORGANISM_TAXID: 210007; SOURCE 4 STRAIN: ATCC 700610 / UA159; SOURCE 5 GENE: COMEB, SMU_1849; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS DCMP DEAMINASE, INHIBITOR, ALLOSTERIC REGULATION, ENZYME COMPLEX, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.H.LI,Z.Q.GAO,H.F.HOU,Y.H.DONG REVDAT 3 20-MAR-24 5C2O 1 LINK REVDAT 2 18-DEC-19 5C2O 1 JRNL REMARK REVDAT 1 13-JUL-16 5C2O 0 JRNL AUTH Y.LI,Z.GUO,L.JIN,D.WANG,Z.GAO,X.SU,H.HOU,Y.DONG JRNL TITL MECHANISM OF THE ALLOSTERIC REGULATION OF STREPTOCOCCUS JRNL TITL 2 MUTANS 2'-DEOXYCYTIDYLATE DEAMINASE. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 72 883 2016 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 27377385 JRNL DOI 10.1107/S2059798316009153 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 19994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1051 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.1921 - 4.6963 1.00 2461 148 0.1490 0.1669 REMARK 3 2 4.6963 - 3.7296 1.00 2406 128 0.1548 0.1821 REMARK 3 3 3.7296 - 3.2587 1.00 2343 149 0.1876 0.2292 REMARK 3 4 3.2587 - 2.9610 1.00 2332 135 0.2230 0.2449 REMARK 3 5 2.9610 - 2.7489 1.00 2359 125 0.2355 0.2638 REMARK 3 6 2.7489 - 2.5869 1.00 2338 160 0.2192 0.2718 REMARK 3 7 2.5869 - 2.4574 1.00 2371 93 0.2257 0.2487 REMARK 3 8 2.4574 - 2.3505 1.00 2333 113 0.2284 0.2675 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2348 REMARK 3 ANGLE : 1.163 3194 REMARK 3 CHIRALITY : 0.043 358 REMARK 3 PLANARITY : 0.005 404 REMARK 3 DIHEDRAL : 18.126 856 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ENTRY CONTAINS FRIEDEL PAIRS IN REMARK 3 F_PLUS/MINUS, I_PLUS/MINUS COLUMNS REMARK 4 REMARK 4 5C2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210918. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BSRF REMARK 200 BEAMLINE : 3W1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2824 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19994 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 15.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 56.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS, REMARK 200 I_PLUS/MINUS COLUMNS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 56.22750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.22750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.22750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.22750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 56.22750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.22750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 56.22750 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 56.22750 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 56.22750 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 56.22750 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 56.22750 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 56.22750 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 56.22750 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 56.22750 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 56.22750 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 56.22750 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 56.22750 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 56.22750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 23740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -374.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 SER A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 SER A -23 REMARK 465 SER A -22 REMARK 465 GLY A -21 REMARK 465 LEU A -20 REMARK 465 VAL A -19 REMARK 465 PRO A -18 REMARK 465 ARG A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 MET A -13 REMARK 465 ALA A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 GLN A -6 REMARK 465 GLN A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ASN A 3 REMARK 465 ARG A 4 REMARK 465 GLU A 149 REMARK 465 LYS A 150 REMARK 465 MET B -33 REMARK 465 GLY B -32 REMARK 465 SER B -31 REMARK 465 SER B -30 REMARK 465 HIS B -29 REMARK 465 HIS B -28 REMARK 465 HIS B -27 REMARK 465 HIS B -26 REMARK 465 HIS B -25 REMARK 465 HIS B -24 REMARK 465 SER B -23 REMARK 465 SER B -22 REMARK 465 GLY B -21 REMARK 465 LEU B -20 REMARK 465 VAL B -19 REMARK 465 PRO B -18 REMARK 465 ARG B -17 REMARK 465 GLY B -16 REMARK 465 SER B -15 REMARK 465 HIS B -14 REMARK 465 MET B -13 REMARK 465 ALA B -12 REMARK 465 SER B -11 REMARK 465 MET B -10 REMARK 465 THR B -9 REMARK 465 GLY B -8 REMARK 465 GLY B -7 REMARK 465 GLN B -6 REMARK 465 GLN B -5 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ASN B 3 REMARK 465 ARG B 4 REMARK 465 GLU B 149 REMARK 465 LYS B 150 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 838 O HOH A 841 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 120 OH TYR A 120 6566 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 27 112.66 -168.65 REMARK 500 ASN B 37 19.99 59.75 REMARK 500 ASN B 117 -82.77 -83.73 REMARK 500 TYR B 120 -85.60 -107.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 24 SG REMARK 620 2 CYS A 54 SG 113.5 REMARK 620 3 CYS A 66 SG 119.1 103.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 71 ND1 REMARK 620 2 CYS A 99 SG 111.6 REMARK 620 3 CYS A 102 SG 117.3 105.7 REMARK 620 4 HOH A 812 O 103.9 108.1 110.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 703 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TTP A 704 O1A REMARK 620 2 TTP A 704 O1B 84.5 REMARK 620 3 TTP A 704 O3G 93.4 81.9 REMARK 620 4 HOH A 827 O 87.1 84.5 166.3 REMARK 620 5 HOH A 831 O 82.2 161.1 85.4 108.2 REMARK 620 6 HOH A 848 O 176.1 93.0 89.3 89.6 100.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 24 SG REMARK 620 2 CYS B 54 SG 112.2 REMARK 620 3 HIS B 59 ND1 98.8 110.3 REMARK 620 4 CYS B 66 SG 115.6 107.0 112.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 71 ND1 REMARK 620 2 CYS B 99 SG 111.6 REMARK 620 3 CYS B 102 SG 114.2 109.6 REMARK 620 4 HOH B 802 O 94.4 115.8 110.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 703 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TTP B 704 O1A REMARK 620 2 TTP B 704 O1B 73.8 REMARK 620 3 TTP B 704 O3G 84.9 77.4 REMARK 620 4 HOH B 822 O 76.8 148.5 89.0 REMARK 620 5 HOH B 826 O 167.9 98.2 84.4 108.7 REMARK 620 6 HOH B 842 O 90.6 90.6 167.9 100.9 98.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TTP A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TTP B 704 DBREF 5C2O A 1 150 UNP Q8DSE5 Q8DSE5_STRMU 1 150 DBREF 5C2O B 1 150 UNP Q8DSE5 Q8DSE5_STRMU 1 150 SEQADV 5C2O MET A -33 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY A -32 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER A -31 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER A -30 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS A -29 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS A -28 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS A -27 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS A -26 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS A -25 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS A -24 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER A -23 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER A -22 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY A -21 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O LEU A -20 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O VAL A -19 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O PRO A -18 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O ARG A -17 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY A -16 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER A -15 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS A -14 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O MET A -13 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O ALA A -12 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER A -11 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O MET A -10 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O THR A -9 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY A -8 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY A -7 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLN A -6 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLN A -5 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O MET A -4 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY A -3 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O ARG A -2 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY A -1 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER A 0 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O MET B -33 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY B -32 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER B -31 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER B -30 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS B -29 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS B -28 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS B -27 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS B -26 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS B -25 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS B -24 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER B -23 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER B -22 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY B -21 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O LEU B -20 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O VAL B -19 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O PRO B -18 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O ARG B -17 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY B -16 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER B -15 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O HIS B -14 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O MET B -13 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O ALA B -12 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER B -11 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O MET B -10 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O THR B -9 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY B -8 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY B -7 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLN B -6 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLN B -5 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O MET B -4 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY B -3 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O ARG B -2 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O GLY B -1 UNP Q8DSE5 EXPRESSION TAG SEQADV 5C2O SER B 0 UNP Q8DSE5 EXPRESSION TAG SEQRES 1 A 184 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 184 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 184 GLY GLN GLN MET GLY ARG GLY SER MET THR ASN ARG LEU SEQRES 4 A 184 SER TRP GLN ASP TYR PHE MET ALA ASN ALA GLU LEU ILE SEQRES 5 A 184 SER LYS ARG SER THR CYS ASN ARG ALA TYR VAL GLY ALA SEQRES 6 A 184 VAL LEU VAL LYS ASN ASN ARG ILE ILE ALA THR GLY TYR SEQRES 7 A 184 ASN GLY GLY VAL ALA ASP THR ASP ASN CYS ASP ASP VAL SEQRES 8 A 184 GLY HIS GLU MET GLU ASP GLY HIS CYS ILE ARG THR VAL SEQRES 9 A 184 HIS ALA GLU MET ASN ALA LEU ILE GLN CYS ALA LYS GLU SEQRES 10 A 184 GLY ILE SER ALA ASN ASN THR GLU ILE TYR VAL THR HIS SEQRES 11 A 184 PHE PRO CYS ILE ASN CYS THR LYS ALA LEU LEU GLN ALA SEQRES 12 A 184 GLY VAL LYS LYS ILE THR TYR ASN THR ALA TYR ARG ILE SEQRES 13 A 184 HIS PRO PHE ALA ILE GLU LEU MET THR GLN LYS GLU VAL SEQRES 14 A 184 GLU TYR VAL GLN HIS ASP VAL PRO ARG VAL LYS LEU GLY SEQRES 15 A 184 GLU LYS SEQRES 1 B 184 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 184 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 B 184 GLY GLN GLN MET GLY ARG GLY SER MET THR ASN ARG LEU SEQRES 4 B 184 SER TRP GLN ASP TYR PHE MET ALA ASN ALA GLU LEU ILE SEQRES 5 B 184 SER LYS ARG SER THR CYS ASN ARG ALA TYR VAL GLY ALA SEQRES 6 B 184 VAL LEU VAL LYS ASN ASN ARG ILE ILE ALA THR GLY TYR SEQRES 7 B 184 ASN GLY GLY VAL ALA ASP THR ASP ASN CYS ASP ASP VAL SEQRES 8 B 184 GLY HIS GLU MET GLU ASP GLY HIS CYS ILE ARG THR VAL SEQRES 9 B 184 HIS ALA GLU MET ASN ALA LEU ILE GLN CYS ALA LYS GLU SEQRES 10 B 184 GLY ILE SER ALA ASN ASN THR GLU ILE TYR VAL THR HIS SEQRES 11 B 184 PHE PRO CYS ILE ASN CYS THR LYS ALA LEU LEU GLN ALA SEQRES 12 B 184 GLY VAL LYS LYS ILE THR TYR ASN THR ALA TYR ARG ILE SEQRES 13 B 184 HIS PRO PHE ALA ILE GLU LEU MET THR GLN LYS GLU VAL SEQRES 14 B 184 GLU TYR VAL GLN HIS ASP VAL PRO ARG VAL LYS LEU GLY SEQRES 15 B 184 GLU LYS HET ZN A 701 1 HET ZN A 702 1 HET MG A 703 1 HET TTP A 704 29 HET ZN B 701 1 HET ZN B 702 1 HET MG B 703 1 HET TTP B 704 29 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE FORMUL 3 ZN 4(ZN 2+) FORMUL 5 MG 2(MG 2+) FORMUL 6 TTP 2(C10 H17 N2 O14 P3) FORMUL 11 HOH *101(H2 O) HELIX 1 AA1 SER A 6 LYS A 20 1 15 HELIX 2 AA2 ASN A 53 GLY A 58 1 6 HELIX 3 AA3 HIS A 71 GLY A 84 1 14 HELIX 4 AA4 CYS A 99 ALA A 109 1 11 HELIX 5 AA5 HIS A 123 LYS A 133 1 11 HELIX 6 AA6 SER B 6 LYS B 20 1 15 HELIX 7 AA7 ASN B 53 GLY B 58 1 6 HELIX 8 AA8 HIS B 71 GLY B 84 1 14 HELIX 9 AA9 CYS B 99 ALA B 109 1 11 HELIX 10 AB1 HIS B 123 LYS B 133 1 11 SHEET 1 AA1 5 ARG A 38 TYR A 44 0 SHEET 2 AA1 5 GLY A 30 LYS A 35 -1 N LEU A 33 O ALA A 41 SHEET 3 AA1 5 GLU A 91 HIS A 96 -1 O GLU A 91 N VAL A 34 SHEET 4 AA1 5 LYS A 113 THR A 118 1 O THR A 115 N ILE A 92 SHEET 5 AA1 5 GLU A 136 GLN A 139 1 O GLU A 136 N ILE A 114 SHEET 1 AA2 2 GLY A 46 GLY A 47 0 SHEET 2 AA2 2 THR A 69 VAL A 70 -1 O VAL A 70 N GLY A 46 SHEET 1 AA3 2 MET A 61 GLU A 62 0 SHEET 2 AA3 2 HIS A 65 CYS A 66 -1 O HIS A 65 N GLU A 62 SHEET 1 AA4 5 ARG B 38 TYR B 44 0 SHEET 2 AA4 5 GLY B 30 LYS B 35 -1 N LEU B 33 O ALA B 41 SHEET 3 AA4 5 GLU B 91 HIS B 96 -1 O GLU B 91 N VAL B 34 SHEET 4 AA4 5 LYS B 113 THR B 118 1 O THR B 115 N VAL B 94 SHEET 5 AA4 5 GLU B 136 GLN B 139 1 O GLU B 136 N ILE B 114 SHEET 1 AA5 2 MET B 61 GLU B 62 0 SHEET 2 AA5 2 HIS B 65 CYS B 66 -1 O HIS B 65 N GLU B 62 LINK SG CYS A 24 ZN ZN A 701 1555 1555 2.43 LINK SG CYS A 54 ZN ZN A 701 1555 1555 2.36 LINK SG CYS A 66 ZN ZN A 701 1555 1555 2.39 LINK ND1 HIS A 71 ZN ZN A 702 1555 1555 2.19 LINK SG CYS A 99 ZN ZN A 702 1555 1555 2.34 LINK SG CYS A 102 ZN ZN A 702 1555 1555 2.41 LINK ZN ZN A 702 O HOH A 812 1555 1555 2.40 LINK MG MG A 703 O1A TTP A 704 1555 1555 2.10 LINK MG MG A 703 O1B TTP A 704 1555 1555 2.18 LINK MG MG A 703 O3G TTP A 704 1555 1555 2.20 LINK MG MG A 703 O HOH A 827 1555 1555 2.24 LINK MG MG A 703 O HOH A 831 1555 1555 2.27 LINK MG MG A 703 O HOH A 848 1555 1555 2.32 LINK SG CYS B 24 ZN ZN B 701 1555 1555 2.52 LINK SG CYS B 54 ZN ZN B 701 1555 1555 2.36 LINK ND1 HIS B 59 ZN ZN B 701 1555 1555 2.37 LINK SG CYS B 66 ZN ZN B 701 1555 1555 2.33 LINK ND1 HIS B 71 ZN ZN B 702 1555 1555 2.12 LINK SG CYS B 99 ZN ZN B 702 1555 1555 2.39 LINK SG CYS B 102 ZN ZN B 702 1555 1555 2.47 LINK ZN ZN B 702 O HOH B 802 1555 1555 2.33 LINK MG MG B 703 O1A TTP B 704 1555 1555 2.31 LINK MG MG B 703 O1B TTP B 704 1555 1555 2.30 LINK MG MG B 703 O3G TTP B 704 1555 1555 2.16 LINK MG MG B 703 O HOH B 822 1555 1555 2.21 LINK MG MG B 703 O HOH B 826 1555 1555 2.07 LINK MG MG B 703 O HOH B 842 1555 1555 2.28 SITE 1 AC1 4 CYS A 24 CYS A 54 HIS A 59 CYS A 66 SITE 1 AC2 4 HIS A 71 CYS A 99 CYS A 102 HOH A 812 SITE 1 AC3 4 TTP A 704 HOH A 827 HOH A 831 HOH A 848 SITE 1 AC4 22 ARG A 21 THR A 23 THR A 42 GLY A 43 SITE 2 AC4 22 TYR A 44 GLY A 46 GLY A 47 ALA A 49 SITE 3 AC4 22 ASP A 50 ASN A 53 ASN A 75 GLN A 79 SITE 4 AC4 22 MG A 703 HOH A 804 HOH A 806 HOH A 818 SITE 5 AC4 22 HOH A 820 HOH A 827 HOH A 831 HOH A 834 SITE 6 AC4 22 TRP B 7 GLN B 108 SITE 1 AC5 4 CYS B 24 CYS B 54 HIS B 59 CYS B 66 SITE 1 AC6 4 HIS B 71 CYS B 99 CYS B 102 HOH B 802 SITE 1 AC7 4 TTP B 704 HOH B 822 HOH B 826 HOH B 842 SITE 1 AC8 26 TRP A 7 ASN A 37 GLN A 108 HOH A 802 SITE 2 AC8 26 HOH A 807 ARG B 21 THR B 23 THR B 42 SITE 3 AC8 26 GLY B 43 TYR B 44 GLY B 46 GLY B 47 SITE 4 AC8 26 ALA B 49 ASP B 50 ASN B 53 ASN B 75 SITE 5 AC8 26 GLN B 79 MG B 703 HOH B 804 HOH B 811 SITE 6 AC8 26 HOH B 822 HOH B 826 HOH B 827 HOH B 833 SITE 7 AC8 26 HOH B 835 HOH B 836 CRYST1 112.455 112.455 112.455 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008892 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008892 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008892 0.00000