HEADER TRANSPORT PROTEIN 17-JUN-15 5C3L TITLE STRUCTURE OF THE METAZOAN NUP62.NUP58.NUP54 NUCLEOPORIN COMPLEX. COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUP54; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: COILED COIL; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NUCLEOPORIN NUP58; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: COILED COIL; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: NUCLEOPORIN NUP62; COMPND 13 CHAIN: C; COMPND 14 FRAGMENT: COILED COIL; COMPND 15 SYNONYM: NUCLEAR PORE COMPLEX GLYCOPROTEIN P62; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: NANOBODY NB15; COMPND 19 CHAIN: D; COMPND 20 FRAGMENT: NANOBODY; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: PART OF NUP54 N-TERMINUS WITH WEAK ELECTRON DENSITY, BUILT COMPND 24 AS POLY-ALANINE.; COMPND 25 CHAIN: H; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: NEB EXPRESS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE-80; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 12 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 13 ORGANISM_TAXID: 8355; SOURCE 14 GENE: MGC84997; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: NEB EXPRESS; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PQE-80; SOURCE 20 MOL_ID: 3; SOURCE 21 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 22 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 23 ORGANISM_TAXID: 8355; SOURCE 24 GENE: NUP62, IL4I1; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 27 EXPRESSION_SYSTEM_STRAIN: NEB EXPRESS; SOURCE 28 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 29 EXPRESSION_SYSTEM_PLASMID: PQE-80; SOURCE 30 MOL_ID: 4; SOURCE 31 ORGANISM_SCIENTIFIC: CAMELUS DROMEDARIUS; SOURCE 32 ORGANISM_COMMON: ARABIAN CAMEL; SOURCE 33 ORGANISM_TAXID: 9838; SOURCE 34 GENE: IMMUNOGLOBULIN G; SOURCE 35 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 36 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 37 EXPRESSION_SYSTEM_STRAIN: NEB SHUFFLE; SOURCE 38 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 39 EXPRESSION_SYSTEM_PLASMID: PQE-80; SOURCE 40 MOL_ID: 5; SOURCE 41 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 42 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 43 ORGANISM_TAXID: 8355; SOURCE 44 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 45 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOPORIN, HETEROTRIMERIC COILED COILS, KINK CONTAINING COILED- KEYWDS 2 COILS, SIX HELIX-BUNDLE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.CHUG,S.TRAKHANOV,B.B.HULSMANN,T.PLEINER,D.GORLICH REVDAT 4 10-JAN-24 5C3L 1 REMARK REVDAT 3 14-OCT-15 5C3L 1 JRNL REVDAT 2 02-SEP-15 5C3L 1 JRNL REVDAT 1 26-AUG-15 5C3L 0 JRNL AUTH H.CHUG,S.TRAKHANOV,B.B.HULSMANN,T.PLEINER,D.GORLICH JRNL TITL CRYSTAL STRUCTURE OF THE METAZOAN NUP62NUP58NUP54 JRNL TITL 2 NUCLEOPORIN COMPLEX. JRNL REF SCIENCE V. 350 106 2015 JRNL REFN ESSN 1095-9203 JRNL PMID 26292704 JRNL DOI 10.1126/SCIENCE.AAC7420 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 26500 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.266 REMARK 3 R VALUE (WORKING SET) : 0.265 REMARK 3 FREE R VALUE : 0.301 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.8859 - 6.4456 1.00 4389 135 0.2810 0.3044 REMARK 3 2 6.4456 - 5.1176 1.00 4374 137 0.3134 0.3224 REMARK 3 3 5.1176 - 4.4711 1.00 4385 134 0.2295 0.2632 REMARK 3 4 4.4711 - 4.0625 1.00 4380 137 0.2164 0.2691 REMARK 3 5 4.0625 - 3.7714 1.00 4357 138 0.2324 0.2645 REMARK 3 6 3.7714 - 3.5491 0.99 4344 137 0.2446 0.2901 REMARK 3 7 3.5491 - 3.3714 0.99 4360 138 0.2530 0.3661 REMARK 3 8 3.3714 - 3.2247 0.98 4325 132 0.2694 0.3301 REMARK 3 9 3.2247 - 3.1006 0.98 4255 136 0.3022 0.3240 REMARK 3 10 3.1006 - 2.9936 0.97 4263 126 0.3505 0.3779 REMARK 3 11 2.9936 - 2.9000 0.95 4185 129 0.3538 0.3983 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4068 REMARK 3 ANGLE : 0.922 5475 REMARK 3 CHIRALITY : 0.035 621 REMARK 3 PLANARITY : 0.004 722 REMARK 3 DIHEDRAL : 17.501 1578 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5C3L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210969. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97864 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL FIXED-EXIT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : DYNAMICALLY BENDABLE MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49303 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 51.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 101.0 REMARK 200 R MERGE (I) : 0.23500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 39.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 6.10600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4HEP REMARK 200 REMARK 200 REMARK: HEXAGONAL RODS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG MME 2000, TRIMETHYLAMINE N-OXIDE, REMARK 280 TRIS-HCL, PH 8.4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 95.14667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.57333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 71.36000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 23.78667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 118.93333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 95.14667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 47.57333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 23.78667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 71.36000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 118.93333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -125.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 141 REMARK 465 SER A 142 REMARK 465 MET A 143 REMARK 465 GLY A 144 REMARK 465 THR A 145 REMARK 465 ILE A 146 REMARK 465 ASN A 147 REMARK 465 THR A 148 REMARK 465 ALA A 149 REMARK 465 SER A 150 REMARK 465 ALA A 151 REMARK 465 LEU A 152 REMARK 465 SER A 153 REMARK 465 ALA A 154 REMARK 465 PRO A 155 REMARK 465 THR A 156 REMARK 465 LEU A 157 REMARK 465 LEU A 158 REMARK 465 GLY A 159 REMARK 465 ASP A 160 REMARK 465 GLU A 161 REMARK 465 ARG A 162 REMARK 465 ASP A 163 REMARK 465 ALA A 164 REMARK 465 ILE A 165 REMARK 465 LEU A 166 REMARK 465 ALA A 167 REMARK 465 LYS A 168 REMARK 465 TRP A 169 REMARK 465 ASN A 170 REMARK 465 GLN A 171 REMARK 465 LEU A 172 REMARK 465 GLN A 173 REMARK 465 ALA A 174 REMARK 465 PHE A 175 REMARK 465 TRP A 176 REMARK 465 GLY A 177 REMARK 465 THR A 178 REMARK 465 GLY A 179 REMARK 465 LYS A 180 REMARK 465 GLY A 181 REMARK 465 PHE A 182 REMARK 465 PHE A 183 REMARK 465 MET A 184 REMARK 465 ASN A 185 REMARK 465 ASN A 186 REMARK 465 THR A 187 REMARK 465 PRO A 188 REMARK 465 PRO A 189 REMARK 465 VAL A 190 REMARK 465 GLU A 191 REMARK 465 PHE A 192 REMARK 465 THR A 193 REMARK 465 GLN A 194 REMARK 465 GLU A 195 REMARK 465 ASN A 196 REMARK 465 PRO A 197 REMARK 465 PHE A 198 REMARK 465 CYS A 199 REMARK 465 ARG A 200 REMARK 465 PHE A 201 REMARK 465 LYS A 202 REMARK 465 ALA A 203 REMARK 465 VAL A 204 REMARK 465 GLY A 205 REMARK 465 PHE A 206 REMARK 465 SER A 207 REMARK 465 TYR A 208 REMARK 465 ILE A 209 REMARK 465 PRO A 210 REMARK 465 ASN A 211 REMARK 465 ASN A 212 REMARK 465 LYS A 213 REMARK 465 ASP A 214 REMARK 465 GLU A 215 REMARK 465 ASP A 216 REMARK 465 GLY A 217 REMARK 465 LEU A 218 REMARK 465 ILE A 219 REMARK 465 SER A 220 REMARK 465 LEU A 221 REMARK 465 ILE A 222 REMARK 465 PHE A 223 REMARK 465 ASN A 224 REMARK 465 LYS A 225 REMARK 465 LYS A 226 REMARK 465 GLU A 227 REMARK 465 SER A 228 REMARK 465 ASP A 229 REMARK 465 ILE A 230 REMARK 465 ARG A 231 REMARK 465 GLY A 232 REMARK 465 GLN A 233 REMARK 465 GLN A 234 REMARK 465 GLN A 235 REMARK 465 GLN A 236 REMARK 465 LEU A 237 REMARK 465 VAL A 238 REMARK 465 GLU A 239 REMARK 465 SER A 240 REMARK 465 LEU A 241 REMARK 465 HIS A 242 REMARK 465 LYS A 243 REMARK 465 VAL A 244 REMARK 465 LEU A 245 REMARK 465 GLY A 246 REMARK 465 GLY A 247 REMARK 465 HIS A 248 REMARK 465 GLN A 249 REMARK 465 THR A 250 REMARK 465 LEU A 251 REMARK 465 THR A 252 REMARK 465 VAL A 253 REMARK 465 ASN A 254 REMARK 465 VAL A 255 REMARK 465 GLU A 256 REMARK 465 GLY A 257 REMARK 465 VAL A 258 REMARK 465 LYS A 259 REMARK 465 THR A 260 REMARK 465 LYS A 261 REMARK 465 ALA A 262 REMARK 465 ASP A 263 REMARK 465 ASN A 264 REMARK 465 GLN A 265 REMARK 465 THR A 266 REMARK 465 GLU A 267 REMARK 465 VAL A 268 REMARK 465 ILE A 269 REMARK 465 ILE A 270 REMARK 465 TYR A 271 REMARK 465 VAL A 272 REMARK 465 VAL A 273 REMARK 465 GLU A 274 REMARK 465 ARG A 275 REMARK 465 SER A 276 REMARK 465 PRO A 277 REMARK 465 ASN A 278 REMARK 465 GLY A 279 REMARK 465 THR A 280 REMARK 465 SER A 281 REMARK 465 ARG A 282 REMARK 465 ARG A 283 REMARK 465 VAL A 284 REMARK 465 GLY A 285 REMARK 465 ALA A 286 REMARK 465 SER A 287 REMARK 465 ALA A 288 REMARK 465 LEU A 289 REMARK 465 PHE A 290 REMARK 465 SER A 291 REMARK 465 TYR A 292 REMARK 465 PHE A 293 REMARK 465 GLU A 294 REMARK 465 GLN A 295 REMARK 465 ALA A 296 REMARK 465 HIS A 297 REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ALA A 300 REMARK 465 ASN A 301 REMARK 465 MET A 302 REMARK 465 GLN A 303 REMARK 465 GLN A 304 REMARK 465 LEU A 305 REMARK 465 GLY A 306 REMARK 465 VAL A 307 REMARK 465 THR A 308 REMARK 465 GLY A 309 REMARK 465 ALA A 310 REMARK 465 MET A 311 REMARK 465 ALA A 312 REMARK 465 GLN A 313 REMARK 465 THR A 314 REMARK 465 GLU A 315 REMARK 465 LEU A 316 REMARK 465 ALA A 451 REMARK 465 PRO A 452 REMARK 465 THR A 453 REMARK 465 GLN A 454 REMARK 465 PHE A 455 REMARK 465 LYS A 456 REMARK 465 GLY A 457 REMARK 465 ARG A 458 REMARK 465 LEU A 459 REMARK 465 ASN A 460 REMARK 465 GLU A 461 REMARK 465 LEU A 462 REMARK 465 MET A 463 REMARK 465 SER A 464 REMARK 465 GLN A 465 REMARK 465 ILE A 466 REMARK 465 ARG A 467 REMARK 465 MET A 468 REMARK 465 GLN A 469 REMARK 465 ASN A 470 REMARK 465 HIS A 471 REMARK 465 PHE A 472 REMARK 465 GLY A 473 REMARK 465 ALA B 266 REMARK 465 GLY B 267 REMARK 465 THR B 268 REMARK 465 ARG B 269 REMARK 465 PRO B 270 REMARK 465 GLU B 271 REMARK 465 ASP B 272 REMARK 465 SER B 273 REMARK 465 LYS B 274 REMARK 465 ALA B 275 REMARK 465 LEU B 276 REMARK 465 LYS B 277 REMARK 465 ASP B 278 REMARK 465 GLU B 279 REMARK 465 ASN B 280 REMARK 465 LEU B 281 REMARK 465 PRO B 282 REMARK 465 THR B 407 REMARK 465 ALA C 339 REMARK 465 GLY C 340 REMARK 465 THR C 341 REMARK 465 ALA C 342 REMARK 465 ALA C 343 REMARK 465 ALA C 344 REMARK 465 THR C 345 REMARK 465 GLY C 346 REMARK 465 ILE C 347 REMARK 465 SER C 348 REMARK 465 THR C 349 REMARK 465 ALA C 350 REMARK 465 THR C 351 REMARK 465 ALA C 352 REMARK 465 MET C 353 REMARK 465 THR C 354 REMARK 465 TYR C 355 REMARK 465 ALA C 356 REMARK 465 GLN C 357 REMARK 465 SER C 443 REMARK 465 GLY C 444 REMARK 465 THR C 445 REMARK 465 ILE C 446 REMARK 465 TYR C 447 REMARK 465 LEU C 448 REMARK 465 SER C 486 REMARK 465 ALA C 487 REMARK 465 GLY C 488 REMARK 465 ALA D -4 REMARK 465 GLY D -3 REMARK 465 THR D -2 REMARK 465 ALA D -1 REMARK 465 SER D 0 REMARK 465 GLY D 113 REMARK 465 SER D 114 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 360 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 351 HZ2 LYS B 354 1.53 REMARK 500 HH12 ARG D 67 OD2 ASP D 90 1.55 REMARK 500 OD2 ASP A 385 HZ2 LYS C 408 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 318 -86.40 -115.16 REMARK 500 ASN A 327 -159.17 -78.03 REMARK 500 LEU A 329 -92.54 -107.06 REMARK 500 GLN A 432 143.59 71.85 REMARK 500 CYS B 286 22.40 -76.98 REMARK 500 PHE B 292 12.78 -140.51 REMARK 500 GLU C 370 30.66 -91.02 REMARK 500 ASP C 371 -17.01 -146.42 REMARK 500 GLU C 441 89.20 -64.24 REMARK 500 UNK H 119 45.17 -73.31 REMARK 500 REMARK 500 REMARK: NULL DBREF 5C3L A 146 473 UNP K9ZTJ6 K9ZTJ6_XENLA 146 473 DBREF 5C3L B 266 407 UNP Q5EAX5 Q5EAX5_XENLA 266 407 DBREF 5C3L C 342 488 UNP Q91349 Q91349_XENLA 342 488 DBREF 5C3L D -4 114 PDB 5C3L 5C3L -4 114 DBREF 5C3L H 107 120 PDB 5C3L 5C3L 107 120 SEQADV 5C3L GLY A 141 UNP K9ZTJ6 EXPRESSION TAG SEQADV 5C3L SER A 142 UNP K9ZTJ6 EXPRESSION TAG SEQADV 5C3L MET A 143 UNP K9ZTJ6 EXPRESSION TAG SEQADV 5C3L GLY A 144 UNP K9ZTJ6 EXPRESSION TAG SEQADV 5C3L THR A 145 UNP K9ZTJ6 EXPRESSION TAG SEQADV 5C3L ALA C 339 UNP Q91349 EXPRESSION TAG SEQADV 5C3L GLY C 340 UNP Q91349 EXPRESSION TAG SEQADV 5C3L THR C 341 UNP Q91349 EXPRESSION TAG SEQRES 1 A 333 GLY SER MET GLY THR ILE ASN THR ALA SER ALA LEU SER SEQRES 2 A 333 ALA PRO THR LEU LEU GLY ASP GLU ARG ASP ALA ILE LEU SEQRES 3 A 333 ALA LYS TRP ASN GLN LEU GLN ALA PHE TRP GLY THR GLY SEQRES 4 A 333 LYS GLY PHE PHE MET ASN ASN THR PRO PRO VAL GLU PHE SEQRES 5 A 333 THR GLN GLU ASN PRO PHE CYS ARG PHE LYS ALA VAL GLY SEQRES 6 A 333 PHE SER TYR ILE PRO ASN ASN LYS ASP GLU ASP GLY LEU SEQRES 7 A 333 ILE SER LEU ILE PHE ASN LYS LYS GLU SER ASP ILE ARG SEQRES 8 A 333 GLY GLN GLN GLN GLN LEU VAL GLU SER LEU HIS LYS VAL SEQRES 9 A 333 LEU GLY GLY HIS GLN THR LEU THR VAL ASN VAL GLU GLY SEQRES 10 A 333 VAL LYS THR LYS ALA ASP ASN GLN THR GLU VAL ILE ILE SEQRES 11 A 333 TYR VAL VAL GLU ARG SER PRO ASN GLY THR SER ARG ARG SEQRES 12 A 333 VAL GLY ALA SER ALA LEU PHE SER TYR PHE GLU GLN ALA SEQRES 13 A 333 HIS ILE LYS ALA ASN MET GLN GLN LEU GLY VAL THR GLY SEQRES 14 A 333 ALA MET ALA GLN THR GLU LEU SER PRO VAL GLN ILE LYS SEQRES 15 A 333 GLN LEU ILE GLN ASN PRO LEU SER GLY VAL ASP PRO ILE SEQRES 16 A 333 ILE TRP GLU GLN ALA LYS VAL ASP ASN PRO ASP PRO GLU SEQRES 17 A 333 ARG LEU ILE PRO VAL PRO MET ILE GLY PHE LYS GLU LEU SEQRES 18 A 333 LEU ARG ARG LEU GLU VAL GLN ASP GLN MET THR LYS GLN SEQRES 19 A 333 HIS GLN SER ARG LEU ASP ILE ILE SER GLU ASP ILE GLY SEQRES 20 A 333 GLU LEU GLN LYS ASN GLN THR THR THR MET ALA LYS ILE SEQRES 21 A 333 GLY GLN TYR LYS ARG LYS LEU MET GLU LEU SER HIS ARG SEQRES 22 A 333 VAL LEU GLN VAL LEU ILE LYS GLN GLU ILE GLN ARG LYS SEQRES 23 A 333 SER GLY PHE ALA ILE GLN ALA GLU GLU GLU GLN LEU ARG SEQRES 24 A 333 VAL GLN LEU ASP THR ILE GLN SER GLU LEU ASN ALA PRO SEQRES 25 A 333 THR GLN PHE LYS GLY ARG LEU ASN GLU LEU MET SER GLN SEQRES 26 A 333 ILE ARG MET GLN ASN HIS PHE GLY SEQRES 1 B 142 ALA GLY THR ARG PRO GLU ASP SER LYS ALA LEU LYS ASP SEQRES 2 B 142 GLU ASN LEU PRO GLN LEU LEU CYS GLN ASP VAL GLU ASN SEQRES 3 B 142 PHE GLN LYS PHE VAL LYS GLU GLN LYS GLN VAL GLN GLU SEQRES 4 B 142 GLU ILE SER ARG MET SER SER LYS ALA MET LEU LYS VAL SEQRES 5 B 142 GLN GLU ASP ILE LYS ALA LEU LYS GLN LEU LEU SER VAL SEQRES 6 B 142 ALA SER SER GLY LEU GLN ARG ASN ALA LEU ALA ILE ASP SEQRES 7 B 142 LYS LEU LYS ILE GLU THR ALA GLU GLU LEU LYS ASN ALA SEQRES 8 B 142 GLU ILE ALA LEU ARG THR GLN LYS THR PRO PRO GLY LEU SEQRES 9 B 142 GLN HIS GLU ASN THR ALA PRO ALA ASP TYR PHE HIS THR SEQRES 10 B 142 LEU VAL GLN GLN PHE GLU VAL GLN LEU GLN GLN TYR ARG SEQRES 11 B 142 GLN GLN ILE GLU GLU LEU GLU ASN HIS LEU ALA THR SEQRES 1 C 150 ALA GLY THR ALA ALA ALA THR GLY ILE SER THR ALA THR SEQRES 2 C 150 ALA MET THR TYR ALA GLN LEU GLU ASN LEU ILE ASN LYS SEQRES 3 C 150 TRP SER LEU GLU LEU GLU ASP GLN GLU LYS HIS PHE LEU SEQRES 4 C 150 GLN GLN ALA THR GLN VAL ASN ALA TRP ASP ARG THR LEU SEQRES 5 C 150 MET GLN ASN GLY GLU ARG ILE THR THR LEU HIS ARG GLU SEQRES 6 C 150 MET GLU LYS VAL LYS LEU ASP GLN LYS ARG LEU ASP GLN SEQRES 7 C 150 GLU LEU ASP PHE ILE LEU SER GLN GLN LYS GLU LEU GLU SEQRES 8 C 150 ASP LEU LEU THR PRO LEU GLU GLU SER VAL LYS GLU GLN SEQRES 9 C 150 SER GLY THR ILE TYR LEU GLN HIS ALA ASP GLU GLU ARG SEQRES 10 C 150 GLU LYS THR TYR LYS LEU ALA GLU ASN ILE ASP ALA GLN SEQRES 11 C 150 LEU LYS ARG MET ALA GLN ASP LEU LYS GLU VAL ILE GLU SEQRES 12 C 150 HIS LEU ASN THR SER ALA GLY SEQRES 1 D 119 ALA GLY THR ALA SER GLN VAL GLN LEU GLN GLU SER GLY SEQRES 2 D 119 GLY GLY LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER SEQRES 3 D 119 CYS ALA ALA SER GLY PHE THR PHE SER ASN TYR ALA MET SEQRES 4 D 119 SER TRP VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU VAL SEQRES 5 D 119 VAL SER ASP ILE GLY SER GLY GLY ASP ARG ILE THR TYR SEQRES 6 D 119 ALA ASP SER VAL LYS GLY ARG PHE THR ILE SER ARG ASP SEQRES 7 D 119 ASN ALA LYS ASN THR LEU TYR LEU GLN MET ASN SER LEU SEQRES 8 D 119 LYS PRO GLU ASP THR ALA VAL TYR TYR CYS ALA ASN GLN SEQRES 9 D 119 TYR GLY ARG GLY PRO GLY THR GLN VAL THR VAL SER SER SEQRES 10 D 119 GLY SER SEQRES 1 H 14 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 2 H 14 UNK HELIX 1 AA1 ASP A 333 ASP A 343 1 11 HELIX 2 AA2 ILE A 356 LYS A 426 1 71 HELIX 3 AA3 GLN A 432 LEU A 449 1 18 HELIX 4 AA4 LEU B 285 PHE B 292 5 8 HELIX 5 AA5 GLN B 293 MET B 309 1 17 HELIX 6 AA6 SER B 311 THR B 365 1 55 HELIX 7 AA7 PRO B 366 ASN B 373 5 8 HELIX 8 AA8 THR B 374 HIS B 404 1 31 HELIX 9 AA9 LEU C 361 GLU C 441 1 81 HELIX 10 AB1 HIS C 450 ASN C 484 1 35 HELIX 11 AB2 THR D 28 TYR D 32 5 5 HELIX 12 AB3 ASN D 74 LYS D 76 5 3 HELIX 13 AB4 LYS D 87 THR D 91 5 5 HELIX 14 AB5 UNK H 111 UNK H 119 1 9 SHEET 1 AA1 4 GLN D 3 SER D 7 0 SHEET 2 AA1 4 LEU D 18 SER D 25 -1 O ALA D 23 N GLN D 5 SHEET 3 AA1 4 THR D 78 MET D 83 -1 O MET D 83 N LEU D 18 SHEET 4 AA1 4 PHE D 68 ASP D 73 -1 N ASP D 73 O THR D 78 SHEET 1 AA2 6 GLY D 10 VAL D 12 0 SHEET 2 AA2 6 GLN D 107 VAL D 110 1 O THR D 109 N VAL D 12 SHEET 3 AA2 6 ALA D 92 ASN D 98 -1 N ALA D 92 O VAL D 108 SHEET 4 AA2 6 MET D 34 GLN D 39 -1 N VAL D 37 O TYR D 95 SHEET 5 AA2 6 GLU D 46 ILE D 51 -1 O VAL D 48 N TRP D 36 SHEET 6 AA2 6 THR D 59 TYR D 60 -1 O THR D 59 N ASP D 50 SHEET 1 AA3 4 GLY D 10 VAL D 12 0 SHEET 2 AA3 4 GLN D 107 VAL D 110 1 O THR D 109 N VAL D 12 SHEET 3 AA3 4 ALA D 92 ASN D 98 -1 N ALA D 92 O VAL D 108 SHEET 4 AA3 4 GLY D 101 ARG D 102 -1 O GLY D 101 N ASN D 98 SSBOND 1 CYS D 22 CYS D 96 1555 1555 2.03 LINK C UNK H 107 N UNK H 108 1555 1555 1.33 LINK C UNK H 108 N UNK H 109 1555 1555 1.33 LINK C UNK H 109 N UNK H 110 1555 1555 1.33 LINK C UNK H 110 N UNK H 111 1555 1555 1.33 LINK C UNK H 111 N UNK H 112 1555 1555 1.33 LINK C UNK H 112 N UNK H 113 1555 1555 1.33 LINK C UNK H 113 N UNK H 114 1555 1555 1.33 LINK C UNK H 114 N UNK H 115 1555 1555 1.33 LINK C UNK H 115 N UNK H 116 1555 1555 1.33 LINK C UNK H 116 N UNK H 117 1555 1555 1.33 LINK C UNK H 117 N UNK H 118 1555 1555 1.33 LINK C UNK H 118 N UNK H 119 1555 1555 1.33 LINK C UNK H 119 N UNK H 120 1555 1555 1.34 CISPEP 1 GLN A 326 ASN A 327 0 -1.38 CRYST1 167.570 167.570 142.720 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005968 0.003445 0.000000 0.00000 SCALE2 0.000000 0.006891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007007 0.00000